Citrus Sinensis ID: 048684

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MAATAKLEKRLTLRIRIKKRLLEKIKISLKVPRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLGEDTDSLNEN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHcccccccccccccccccEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHHHccccccccEEEEEccccEEEEEccccccccccccccccccccccEEEEEEccccccccHHHHHHccccccccEEEHHHHHHHHHHcccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccHHHHcccHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEEcccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEcHHHHHHHHccccHHccccccccccEEccEcccccEEEEEEEccccccccEHEcccccEEEEEEcccccEEEEEEEccccccEEEcccccccHHHHcHHHHHccccccEEEEEEEEccccccHHHHHcccccccccHHHHHEEEEEEHcccccccccHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHccHHccccHHHHHHHHcccccccccccccccEEcccccccccccccccccccccccccEHHHHHHHHHHEccccccccccc
Coil and Loop (DISEMBL)
MAATAKLEKRLTLRIRIKKRLLEKIKISlkvprksapknipksvtknapkltrrktkrirgsrglsfnatlVDAElcylkpgwknFALSELQAatdnfshenligqggyAEVYKGQLEDGQFVAIkrltrgspeemtTDYLSELGIivhvdhpniaKMIGYGVEGGMHLILElsphgslaSLLYAkwlpdkwtHHIVSKIegtfgylppeffmhgiadektDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKelvdptlgdayntEQLTRLLLIASACInqtsacrpQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSeeffdaeefnsaslneldvndiNRHMEIvlgedtdslnen
Flexible Loop (DISEMBL)
maataklekrltlririkkrllekikislkvprksapknipksvtknapkltrrktkrirgsrglsfnatlVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEivlgedtdslnen
Low Complexity Region (SEG)
MAATAklekrltlririkkrllekikislkVPRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLGEDTDSLNEN
Disordered region (IsUnstruct)
**********LTLRIRIKKRLLEKIKISL**********************************GLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG***ALAQII************F**EFFDA********NELDVNDINRHMEIV***********
Disordered Region (DISOPRED)
*AATAKLEKRLTLRIR******************************************************************WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIK**************LSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE*************************************************************
Disordered Region (DISEMBL)
MAATAKLEKRLTLRIRIKKRLLEKIKISLKVPRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLGEDTDSLNEN
Disordered Region (DISPRO)
*AATAKLEKRLTLRIRIKKRLLEKIKISLKVPR************************************************GWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLR******************ASLNELDVNDINRHMEIVLG*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAATAKLEKRLTLRIRIKKRLLEKIKISLKVPRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAxxxxxxxxxxxxxxxxxxxxxQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLGEDTDSLNEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
Q8RXC8	460	Receptor-like cytosolic s	no	no	0.721	0.569	0.420	7e-65
Q8H1D6	467	Receptor-like cytosolic s	no	no	0.807	0.627	0.362	1e-59
Q5XF57	579	Probable receptor-like se	no	no	0.619	0.388	0.359	3e-48
Q8RWW0	744	Receptor-like serine/thre	no	no	0.592	0.288	0.341	3e-35
Q8LEB6	484	Probable receptor-like pr	no	no	0.619	0.464	0.314	2e-30
P0DH62	567	Inactive protein kinase S	N/A	no	0.592	0.379	0.327	3e-30
Q3EDL4	472	Probable serine/threonine	no	no	0.600	0.461	0.283	1e-29
Q9LK03	717	Proline-rich receptor-lik	no	no	0.589	0.298	0.295	3e-29
Q9C660	762	Proline-rich receptor-lik	no	no	0.688	0.328	0.298	7e-29
Q9CAL2	646	Cysteine-rich receptor-li	no	no	0.597	0.335	0.303	1e-27

>sp|Q8RXC8|RBK2_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana GN=RBK2 PE=1 SV=1

 Score =  248 bits (632), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/340 (42%), Positives = 199/340 (58%), Gaps = 78/340 (22%)

Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
           +NF++S+++ ATDNFS EN+IG+GGYA+VY+G L +G+ +A+KRLT+G+P+E T ++LSE
Sbjct: 129 QNFSISDIEIATDNFSPENIIGRGGYADVYQGILPEGKLIAVKRLTKGTPDEQTAEFLSE 188

Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDK----WTHH---- 195
           LGII HVDHPN AK IG  +EGGMHL+  LSP GSL SLL+    P K    W+      
Sbjct: 189 LGIIAHVDHPNTAKFIGCCIEGGMHLVFRLSPLGSLGSLLHG---PSKYKLTWSRRYNVA 245

Query: 196 ------IVSKIEGT--------------------------FG---YLPPEFFMHGIA--- 217
                 +V   EG                           FG   +LP +   H ++   
Sbjct: 246 LGTADGLVYLHEGCQRRIIHRDIKADNILLTEDFQPQICDFGLAKWLPKQLTHHNVSKFE 305

Query: 218 ----------------DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-------SMK 254
                           DEKTDV+A+GVLLLE+ITG  ALD SQ+SLV+W+       ++K
Sbjct: 306 GTFGYFAPEYFMHGIVDEKTDVFAFGVLLLELITGHPALDESQQSLVLWAKPLLERKAIK 365

Query: 255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQS 314
           ELVDP+LGD YN E+L RL   AS CI+Q+S  RP+MS+VV+ L G E+ +  +      
Sbjct: 366 ELVDPSLGDEYNREELIRLTSTASLCIDQSSLLRPRMSQVVELLLGHEDVV--MTPREAK 423

Query: 315 LRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVLG 354
           ++ +QRT+SEE  D+ E+NS       + D++R  E+ L 
Sbjct: 424 IKMMQRTYSEELLDSVEYNSTKY----LGDLDRIREVALA 459

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8H1D6|RBK1_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana GN=RBK1 PE=1 SV=1

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 204/372 (54%), Gaps = 79/372 (21%)

Query: 50  KLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGY 109
           +LTR+  +R +     S +A   +A     KP W+NF   EL  ATD F+ EN+IG+GG+
Sbjct: 106 ELTRKNLRRKQPKLTPSESAFTCEA-FFMAKPSWRNFTYEELAVATDYFNPENMIGKGGH 164

Query: 110 AEVYKGQLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHPNIAKM--------- 158
           AEVYKG L +G+ VAIK+L   + EE    +D+LSELGII HV+HPN A++         
Sbjct: 165 AEVYKGVLINGETVAIKKLMSHAKEEEERVSDFLSELGIIAHVNHPNAARLRGFSSDRGL 224

Query: 159 ------------------------------IGYGVEGGMHLILELSPH------------ 176
                                         +  G+  G+  +    P             
Sbjct: 225 HFVLEYAPYGSLASMLFGSEECLEWKIRYKVALGIADGLSYLHNACPRRIIHRDIKASNI 284

Query: 177 -------GSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVL 229
                    ++    AKWLP+ W HH+V  IEGTFGYL PE+FMHGI DEK DV+A+GVL
Sbjct: 285 LLNHDYEAQISDFGLAKWLPENWPHHVVFPIEGTFGYLAPEYFMHGIVDEKIDVFAFGVL 344

Query: 230 LLEIITGRQALDS-SQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASACI 281
           LLEIIT R+A+D+ S++S+V W+       SM+++VDP LG+ +N  ++ R++L AS C+
Sbjct: 345 LLEIITSRRAVDTASRQSIVAWAKPFLEKNSMEDIVDPRLGNMFNPTEMQRVMLTASMCV 404

Query: 282 NQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELD 341
           +  +A RP M+++VQ LRG E+  A++ ++       +RT S    D ++  S+S     
Sbjct: 405 HHIAAMRPDMTRLVQLLRG-EDGPAELQQKAG-----ERTMSVNACDLQDHTSSSY---- 454

Query: 342 VNDINRHMEIVL 353
           +N++ RH ++++
Sbjct: 455 LNELRRHRQLLM 466

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5XF57|Y5576_ARATH Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana GN=At5g57670 PE=2 SV=1

 Score =  192 bits (488), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 154/292 (52%), Gaps = 67/292 (22%)

Query: 80  KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE-EMTT 138
           +P  + F  +E+  AT++F   N++G GGY+EVY+G L DG+ +A+KRL + S +     
Sbjct: 249 QPLIQCFTYNEISKATNDFHQGNIVGIGGYSEVYRGDLWDGRRIAVKRLAKESGDMNKEK 308

Query: 139 DYLSELGIIVHVDHPNIAKMIG-------------------------------------- 160
           ++L+ELGII HV HPN A ++G                                      
Sbjct: 309 EFLTELGIISHVSHPNTALLLGCCVEKGLYLVFRFSENGTLYSALHENENGSLDWPVRYK 368

Query: 161 --YGVEGGMHLILELSPH-------------------GSLASLLYAKWLPDKWTHHIVSK 199
              GV  G+H + +   H                     +     AKWLP+KWTHH V  
Sbjct: 369 IAVGVARGLHYLHKRCNHRIIHRDIKSSNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIP 428

Query: 200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-------S 252
           +EGTFGYL PE  M G  DEKTD+YA+G+LLLEIITGR+ ++ +QK +++W+       +
Sbjct: 429 VEGTFGYLAPESLMQGTIDEKTDIYAFGILLLEIITGRRPVNPTQKHILLWAKPAMETGN 488

Query: 253 MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEA 304
             ELVDP L D Y+ +Q+ +L+L AS C+ Q+   RP M++V++ L    EA
Sbjct: 489 TSELVDPKLQDKYDDQQMNKLVLTASHCVQQSPILRPTMTQVLELLTNGNEA 540

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1

 Score =  149 bits (376), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 148/284 (52%), Gaps = 69/284 (24%)

Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
           K F LSEL+ ATD FS + ++G+GG+  VY+G +EDG  VA+K LTR + +    ++++E
Sbjct: 335 KTFTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDN-QNRDREFIAE 393

Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMH-LILELSPHGSLASLLYA---KW------------ 187
           + ++  + H N+ K+IG  +EG    LI EL  +GS+ S L+     W            
Sbjct: 394 VEMLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHEGTLDWDARLKIALGAAR 453

Query: 188 ------------------------LPDKWT----------------HHIVSKIEGTFGYL 207
                                   L D +T                 HI +++ GTFGY+
Sbjct: 454 GLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYV 513

Query: 208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS----LVMWS--------SMKE 255
            PE+ M G    K+DVY+YGV+LLE++TGR+ +D SQ S    LV W+         +++
Sbjct: 514 APEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLVTWARPLLANREGLEQ 573

Query: 256 LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
           LVDP L   YN + + ++  IAS C++Q  + RP M +VVQAL+
Sbjct: 574 LVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQALK 617

Required during the differentiation of the protoderm into shoots epidermis and cuticle.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8LEB6|Y5185_ARATH Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana GN=At5g18500 PE=1 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 142/299 (47%), Gaps = 74/299 (24%)

Query: 82  GWKN-FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDY 140
           GW + F L +LQ AT+ FS +N+IG GGY  VY+G L +G  VA+K+L   +  +   D+
Sbjct: 149 GWGHWFTLRDLQMATNQFSRDNIIGDGGYGVVYRGNLVNGTPVAVKKLLN-NLGQADKDF 207

Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGGMH-LILELSPHGSLASLL--------YAKW---- 187
             E+  I HV H N+ +++GY +EG    L+ E   +G+L   L        Y  W    
Sbjct: 208 RVEVEAIGHVRHKNLVRLLGYCMEGTQRMLVYEYVNNGNLEQWLRGDNQNHEYLTWEARV 267

Query: 188 --------------------------------LPDKWTHHI----------------VSK 199
                                           + DK+   I                 ++
Sbjct: 268 KILIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDKFNSKISDFGLAKLLGADKSFITTR 327

Query: 200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS----LVMWSSM-- 253
           + GTFGY+ PE+   G+ +EK+DVY++GV+LLE ITGR  +D ++      LV W  M  
Sbjct: 328 VMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRYPVDYARPPPEVHLVEWLKMMV 387

Query: 254 -----KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQ 307
                +E+VDP L    +T  L R LL A  C++  S  RP+MS+V + L  +E  +A+
Sbjct: 388 QQRRSEEVVDPNLETKPSTSALKRTLLTALRCVDPMSEKRPRMSQVARMLESEEYPIAR 446

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH62|Y4407_SELML Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 26/241 (10%)

Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
           + F  +ELQ AT  FS  N + +GGY  VY+G+L DGQ VA+K+    S  +   ++ +E
Sbjct: 241 RKFTFAELQLATGGFSDVNFLAEGGYGSVYRGRLPDGQAVAVKQHKLAS-TQGDKEFCAE 299

Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLY------------AKWLPD 190
           + ++      N+  +IGY  E    L++ E   +GSL S LY            A+W P+
Sbjct: 300 VEVLSCAQQRNLVMLIGYCAEDKKRLLVYEFVCNGSLDSHLYGRRSKTVGDFGLARWQPN 359

Query: 191 KWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK----S 246
                + +++ G FGYL PE+   G   EK DVY++G++LLE+++GR+A+D S+      
Sbjct: 360 GELG-VETRVIGAFGYLAPEYTQTGQITEKADVYSFGIVLLELVSGRKAVDLSRNKGEMC 418

Query: 247 LVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
           L  W+         ++L+D  L   +   ++  +LL A+ CI+     RP+MS+V++ L 
Sbjct: 419 LSEWARPFLREQKYEKLIDQRLRGRFCVNEVENMLLAATLCIDPDPLIRPRMSQVLRLLE 478

Query: 300 G 300
           G
Sbjct: 479 G 479

Selaginella moellendorffii (taxid: 88036)

>sp|Q3EDL4|Y1154_ARATH Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2

 Score =  131 bits (329), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 78/296 (26%)

Query: 82  GW-KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRL--TRGSPEEMTT 138
           GW + + L EL+AAT+    EN+IG+GGY  VY+G L DG  VA+K L   RG  E+   
Sbjct: 137 GWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK--- 193

Query: 139 DYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI---------LELSPHGSLASLLYAKW-- 187
           ++  E+ +I  V H N+ +++GY VEG   ++         LE   HG +  +    W  
Sbjct: 194 EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDI 253

Query: 188 ----------------------------------LPDKW----------------THHIV 197
                                             L  +W                + ++ 
Sbjct: 254 RMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVT 313

Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-----------KS 246
           +++ GTFGY+ PE+   G+ +EK+D+Y++G+L++EIITGR  +D S+           KS
Sbjct: 314 TRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKS 373

Query: 247 LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE 302
           +V     +E+VDP + +  +++ L R+LL+A  C++  +  RP+M  ++  L  ++
Sbjct: 374 MVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAED 429

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LK03|PERK2_ARATH Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 77/291 (26%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG 145
           F   EL  AT+ FS  NL+GQGG+  V+KG L +G+ VA+K+L  GS  +   ++ +E+G
Sbjct: 342 FNYEELSRATNGFSEANLLGQGGFGYVFKGMLRNGKEVAVKQLKEGS-SQGEREFQAEVG 400

Query: 146 IIVHVDHPNIAKMIGYGVEGGMHLI---------LELSPHGS------------------ 178
           II  V H ++  ++GY +     L+         LE   HG                   
Sbjct: 401 IISRVHHRHLVALVGYCIADAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSSRLKIAVGSA 460

Query: 179 ---------------------------------LASLLYAKWLPDKWTHHIVSKIEGTFG 205
                                            +A    AK   D  TH + +++ GTFG
Sbjct: 461 KGLSYLHENCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTH-VSTRVMGTFG 519

Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD----SSQKSLVMWS---------- 251
           YL PE+   G   EK+DV+++GV+LLE+ITGR+ +D     +  SLV W+          
Sbjct: 520 YLAPEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHADNSLVDWARPLLNQVSEL 579

Query: 252 -SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
            + + +VD  L + Y+ E++ R++  A+AC+  T+  RP+M +V + L G+
Sbjct: 580 GNFEVVVDKKLNNEYDKEEMARMVACAAACVRSTAPRRPRMDQVARVLEGN 630

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C660|PEK10_ARATH Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana GN=PERK10 PE=1 SV=2

 Score =  128 bits (321), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 85/335 (25%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG 145
           F+  EL  AT+ FS ENL+G+GG+  VYKG L D + VA+K+L  G   +   ++ +E+ 
Sbjct: 418 FSYEELVIATNGFSDENLLGEGGFGRVYKGVLPDERVVAVKQLKIGG-GQGDREFKAEVD 476

Query: 146 IIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLLYAKWLPD-KWT---------- 193
            I  V H N+  M+GY + E    LI +  P+ +L   L+A   P   W           
Sbjct: 477 TISRVHHRNLLSMVGYCISENRRLLIYDYVPNNNLYFHLHAAGTPGLDWATRVKIAAGAA 536

Query: 194 ------------------------------HHIVS-----------------KIEGTFGY 206
                                         H +VS                 ++ GTFGY
Sbjct: 537 RGLAYLHEDCHPRIIHRDIKSSNILLENNFHALVSDFGLAKLALDCNTHITTRVMGTFGY 596

Query: 207 LPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ----KSLVMWS----------- 251
           + PE+   G   EK+DV+++GV+LLE+ITGR+ +D+SQ    +SLV W+           
Sbjct: 597 MAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSNATETE 656

Query: 252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG-DEEAL----- 305
               L DP LG  Y   ++ R++  A+ACI  ++  RP+MS++V+A     EE L     
Sbjct: 657 EFTALADPKLGRNYVGVEMFRMIEAAAACIRHSATKRPRMSQIVRAFDSLAEEDLTNGMR 716

Query: 306 ---AQIIEENQSLRRLQRTFSEEFFDAEEFNSASL 337
              ++II   Q    + R F    F ++ +++ SL
Sbjct: 717 LGESEIINSAQQSAEI-RLFRRMAFGSQNYSTDSL 750

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAL2|CRK3_ARATH Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 70/287 (24%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG 145
           F+   L+ ATD FS +N +GQGG   VYKG L +G+ VA+KRL   + ++    + +E+ 
Sbjct: 311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNT-KQWVDHFFNEVN 369

Query: 146 IIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLYAK-------W---------- 187
           +I  VDH N+ K++G  + G   L++ E   + SL   L+ +       W          
Sbjct: 370 LISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGT 429

Query: 188 --------------------------LPDKWTHHIV----------------SKIEGTFG 205
                                     L D +T  I                 + I GT G
Sbjct: 430 AEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLG 489

Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ---------ALDSSQKSLVMWSSMKEL 256
           Y+ PE+ + G   EK DVY++GVL++E+ITG++         ++  S  SL   S+++E 
Sbjct: 490 YMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNVEEA 549

Query: 257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE 303
           VDP LGD +N  + +RLL I   C+      RP MS VV+ ++G  E
Sbjct: 550 VDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLE 596

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
356557851	408	PREDICTED: receptor-like cytosolic serin	0.834	0.742	0.643	1e-118
449454598	549	PREDICTED: receptor-like cytosolic serin	0.834	0.551	0.559	1e-110
449515189	524	PREDICTED: receptor-like cytosolic serin	0.834	0.578	0.559	1e-110
30687061	511	protein kinase family protein [Arabidops	0.842	0.598	0.558	1e-108
297812069	515	kinase family protein [Arabidopsis lyrat	0.845	0.596	0.556	1e-108
356546462	839	PREDICTED: uncharacterized protein LOC10	0.848	0.367	0.530	8e-97
357447557	442	Somatic embryogenesis receptor kinase [M	0.834	0.685	0.513	3e-96
297736942	487	unnamed protein product [Vitis vinifera]	0.818	0.609	0.501	2e-88
225432446	507	PREDICTED: receptor-like cytosolic serin	0.818	0.585	0.501	4e-88
224107299	431	predicted protein [Populus trichocarpa]	0.746	0.628	0.528	3e-86

>gi|356557851|ref|XP_003547224.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Glycine max]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/331 (64%), Positives = 254/331 (76%), Gaps = 28/331 (8%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIG 105
           KN PKLTRRK+KRIR     S NA  +D E    K  WKNF L+E+QAATD+FSHENLIG
Sbjct: 72  KNVPKLTRRKSKRIREDLIPSLNAASLDTEFGCFKSSWKNFTLAEIQAATDDFSHENLIG 131

Query: 106 QGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG 165
           +GGYAEVY G+LEDG FVAIKRLTRG  EEMT D+LSELGIIVHVDHPNIA++IGYGVEG
Sbjct: 132 EGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEG 191

Query: 166 GMHLILELSPHGSLASLLY---------------AKWLPDKWTHHIVSKIEGTFGYLPPE 210
           GM L+L+LSPHGSL+S+LY               AKWLPD+WTHH VSK+EGTFGYLPPE
Sbjct: 192 GMFLVLQLSPHGSLSSILYVCLMLILYQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPE 251

Query: 211 FFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGD 263
           FFMHGI DEKTDVYAYGVLLLE+ITGRQALDSSQKSLVMW+       ++KELVDP L D
Sbjct: 252 FFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTANNIKELVDPVLAD 311

Query: 264 AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFS 323
           AY+ EQ+  + L AS C++Q+S  RP MS+V+  LRG+EE+L  + E ++S  +LQRT+S
Sbjct: 312 AYDEEQMKLVTLTASLCVDQSSIQRPVMSQVLDILRGEEESLRIMKERSKS--KLQRTYS 369

Query: 324 EEFFDAEEFNSASLNELDVNDINRHMEIVLG 354
           EE  DAEE+NS       +++ +RHME +LG
Sbjct: 370 EELLDAEEYNSTKF----LSERDRHMETILG 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454598|ref|XP_004145041.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cucumis sativus] gi|449474089|ref|XP_004154070.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cucumis sativus]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/377 (55%), Positives = 253/377 (67%), Gaps = 74/377 (19%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNATL---VDAELCYLKPGWKNFALSELQAATDNFSHEN 102
           K  PKLTRRK+KRIR       +  +   ++ E CY +  WKNF LSEL+ A +NFS EN
Sbjct: 173 KAVPKLTRRKSKRIREDMIPVVSPVIDSSIETEFCYFRSSWKNFTLSELEVACNNFSQEN 232

Query: 103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           LIG+GGY+EVYKGQLEDGQ VAIKRL RGS EEMT D+LSELGIIVHVDHPNIA +IGYG
Sbjct: 233 LIGEGGYSEVYKGQLEDGQLVAIKRLNRGSQEEMTADFLSELGIIVHVDHPNIASVIGYG 292

Query: 163 VEGGMHLILELSPHGSLAS------------------------LLY-------------- 184
           VEGGMHLIL LSPHGSLAS                        LLY              
Sbjct: 293 VEGGMHLILHLSPHGSLASILYGSKERLDWSTRYKIALGIAEGLLYLHEGCQRRIIHRDI 352

Query: 185 --------------------AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVY 224
                               AKWLPD+WTHH VSK EGTFGYLPPEFFMHGI DEKTDVY
Sbjct: 353 KAANILLRDDFEPQISDFGLAKWLPDQWTHHTVSKFEGTFGYLPPEFFMHGIVDEKTDVY 412

Query: 225 AYGVLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIA 277
           AYGVLLLE+ITGR+ALDS Q+SLVMW+       ++KELVD +L DA++TEQ+ R++ IA
Sbjct: 413 AYGVLLLELITGRRALDSLQQSLVMWAKPLLSKQNLKELVDLSLVDAFDTEQMKRMISIA 472

Query: 278 SACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASL 337
           S CINQ+S  RP+MS++VQ L+GD     ++++  +S  +LQRT+SEE  DAEE+NS   
Sbjct: 473 SMCINQSSILRPEMSEIVQILKGDGVDNLELVKRQKS--KLQRTYSEELLDAEEYNSTKY 530

Query: 338 NELDVNDINRHMEIVLG 354
               ++DI+RH+EIVLG
Sbjct: 531 ----LSDIDRHLEIVLG 543

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515189|ref|XP_004164632.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cucumis sativus]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/377 (55%), Positives = 253/377 (67%), Gaps = 74/377 (19%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNATL---VDAELCYLKPGWKNFALSELQAATDNFSHEN 102
           K  PKLTRRK+KRIR       +  +   ++ E CY +  WKNF LSEL+ A +NFS EN
Sbjct: 148 KAVPKLTRRKSKRIREDMIPVVSPVIDSSIETEFCYFRSSWKNFTLSELEVACNNFSQEN 207

Query: 103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           LIG+GGY+EVYKGQLEDGQ VAIKRL RGS EEMT D+LSELGIIVHVDHPNIA +IGYG
Sbjct: 208 LIGEGGYSEVYKGQLEDGQLVAIKRLNRGSQEEMTADFLSELGIIVHVDHPNIASVIGYG 267

Query: 163 VEGGMHLILELSPHGSLAS------------------------LLY-------------- 184
           VEGGMHLIL LSPHGSLAS                        LLY              
Sbjct: 268 VEGGMHLILHLSPHGSLASILYGSKERLDWSTRYKIALGIAEGLLYLHEGCQRRIIHRDI 327

Query: 185 --------------------AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVY 224
                               AKWLPD+WTHH VSK EGTFGYLPPEFFMHGI DEKTDVY
Sbjct: 328 KAANILLRDDFEPQISDFGLAKWLPDQWTHHTVSKFEGTFGYLPPEFFMHGIVDEKTDVY 387

Query: 225 AYGVLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIA 277
           AYGVLLLE+ITGR+ALDS Q+SLVMW+       ++KELVD +L DA++TEQ+ R++ IA
Sbjct: 388 AYGVLLLELITGRRALDSLQQSLVMWAKPLLSKQNLKELVDLSLVDAFDTEQMKRMISIA 447

Query: 278 SACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASL 337
           S CINQ+S  RP+MS++VQ L+GD     ++++  +S  +LQRT+SEE  DAEE+NS   
Sbjct: 448 SMCINQSSILRPEMSEIVQILKGDGVDNLELVKRQKS--KLQRTYSEELLDAEEYNSTKY 505

Query: 338 NELDVNDINRHMEIVLG 354
               ++DI+RH+EIVLG
Sbjct: 506 ----LSDIDRHLEIVLG 518

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30687061|ref|NP_197392.2| protein kinase family protein [Arabidopsis thaliana] gi|26450962|dbj|BAC42588.1| putative protein kinase [Arabidopsis thaliana] gi|29028912|gb|AAO64835.1| At5g18910 [Arabidopsis thaliana] gi|332005244|gb|AED92627.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/378 (55%), Positives = 248/378 (65%), Gaps = 72/378 (19%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIG 105
           K  PKLTRRK+KRIR +      A   D  L Y KP W+NF+L ++Q AT+++S ENLIG
Sbjct: 141 KGVPKLTRRKSKRIRDNMVPVIPALDTD-HLFYFKPSWRNFSLRDIQTATNDYSRENLIG 199

Query: 106 QGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG 165
           +GGYAEVYKGQ+ DGQ VAIK+LTRGS EEMT DYLSELGIIVHVDHPNIAK+IGY VEG
Sbjct: 200 EGGYAEVYKGQMADGQIVAIKKLTRGSAEEMTMDYLSELGIIVHVDHPNIAKLIGYCVEG 259

Query: 166 GMHLILELSPH------------------------GSLASLLY----------------- 184
           GMHL+LELSP+                        G+   L Y                 
Sbjct: 260 GMHLVLELSPNGSLASLLYEAKEKLNWSMRYKVAMGTAEGLYYLHEGCQRRIIHKDIKAS 319

Query: 185 -----------------AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
                            AKWLPD+WTHH VSK+EGTFGYLPPEFFMHGI DEKTDVYAYG
Sbjct: 320 NILLTQNFEAQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYG 379

Query: 228 VLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASAC 280
           VLLLE+ITGRQALDSSQ S+VMW+        +K+LVDP L D Y+ E+L RL+ IAS C
Sbjct: 380 VLLLELITGRQALDSSQHSIVMWAKPLIKENKIKQLVDPILEDDYDVEELDRLVFIASLC 439

Query: 281 INQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNEL 340
           I+QTS  RPQMS+VV+ LRGD+ +L ++ E   S  +LQRT+SEE  D EE+NS      
Sbjct: 440 IHQTSMNRPQMSQVVEILRGDKCSLDKLRERENS--KLQRTYSEELLDNEEYNSTRY--- 494

Query: 341 DVNDINRHMEIVLGEDTD 358
            +NDINRHME VLG   D
Sbjct: 495 -LNDINRHMETVLGTSKD 511

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812069|ref|XP_002873918.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297319755|gb|EFH50177.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/379 (55%), Positives = 250/379 (65%), Gaps = 72/379 (18%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIG 105
           K  PKLTRRK+KRIR +      A   D +L Y KP W+NF+L ++Q AT+++S ENLIG
Sbjct: 144 KGVPKLTRRKSKRIRDNMVPVIPALDTD-DLFYFKPSWRNFSLQDIQTATNDYSRENLIG 202

Query: 106 QGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG 165
           +GGYAEVYKGQ+ DGQ VAIK+LTRGS EEMT DYLSELGIIVHVDHPNIAK+IGY VEG
Sbjct: 203 EGGYAEVYKGQMPDGQIVAIKKLTRGSAEEMTMDYLSELGIIVHVDHPNIAKLIGYCVEG 262

Query: 166 GMHLILELSPH------------------------GSLASLLY----------------- 184
           GMHL+LELSP+                        G+   L Y                 
Sbjct: 263 GMHLVLELSPNGSLASLLYEAKGKLNWSMRYKVAMGTAEGLYYLHEGCQRRIIHKDIKAS 322

Query: 185 -----------------AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
                            AKWLPD+WTHH VSK+EGTFGYLPPEFFMHGI DEKTDVYAYG
Sbjct: 323 NILLTQNFEAQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYG 382

Query: 228 VLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASAC 280
           VLLLE+ITGRQALDSSQ S+VMW+        +K+LVDP L D Y+ E+L RL+ IAS C
Sbjct: 383 VLLLELITGRQALDSSQHSIVMWAKPLIKENKIKQLVDPILEDDYDVEELDRLVFIASLC 442

Query: 281 INQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNEL 340
           I+QTS  RPQMS+VV+ LRGD+ +L ++ E   S  +LQRT+SEE  D EE+NS      
Sbjct: 443 IHQTSMNRPQMSQVVEILRGDKCSLDKLRERENS--KLQRTYSEELLDNEEYNSTRY--- 497

Query: 341 DVNDINRHMEIVLGEDTDS 359
            +NDI+RHME VLG   DS
Sbjct: 498 -LNDIHRHMETVLGTSKDS 515

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546462|ref|XP_003541645.1| PREDICTED: uncharacterized protein LOC100818794 [Glycine max]

 Score =  360 bits (923), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 203/383 (53%), Positives = 251/383 (65%), Gaps = 75/383 (19%)

Query: 41  PKSVTKNAPKLTRRKTKRIRGSRGLSFNATLV----DAELCYLKPGWKNFALSELQAATD 96
           P    KN PKLTRRK+KRIR     S N+  +    DAE    K  WKNF L+E+QAAT+
Sbjct: 148 PFHPLKNVPKLTRRKSKRIREDLIPSLNSPALHASFDAEFGCFKSSWKNFTLAEIQAATN 207

Query: 97  NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           +FSHENLIG+GGYAEVY G+LEDG FVAIKRLTRG  EEMT D+LSELGIIVHVDHPNIA
Sbjct: 208 DFSHENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIA 267

Query: 157 KMIGYGVEGGMHLILELSPHGSLASLLYA---------------------KWLPDKWTHH 195
           ++IGYGVEGGM L+L+LSPHGSL+S+LY                      ++L ++    
Sbjct: 268 RLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWNLRYKIALGTAEGLRYLHEECQRR 327

Query: 196 IVSK-IEGT--------------FG---YLP-------------------PEFFMHGIAD 218
           I+ K I+ +              FG   +LP                   PEFFMHGI D
Sbjct: 328 IIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVD 387

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLT 271
           EKTDVYAYGVLLLE+ITGRQALDSSQKSLVMW+       ++KELVDP L DAY+ EQ+ 
Sbjct: 388 EKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTANNIKELVDPVLADAYDEEQMK 447

Query: 272 RLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEE 331
            + L AS C++Q+S  RP MS+V   LRG+EE+L +I+EE +S  +LQRT+SEE FDAEE
Sbjct: 448 LVTLTASLCVDQSSIQRPDMSQVFDILRGEEESL-RIMEE-RSKSKLQRTYSEELFDAEE 505

Query: 332 FNSASLNELDVNDINRHMEIVLG 354
           +NS       +++ +RHME +LG
Sbjct: 506 YNSTKF----LSERDRHMETILG 524

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447557|ref|XP_003594054.1| Somatic embryogenesis receptor kinase [Medicago truncatula] gi|355483102|gb|AES64305.1| Somatic embryogenesis receptor kinase [Medicago truncatula]

 Score =  358 bits (918), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 194/378 (51%), Positives = 241/378 (63%), Gaps = 75/378 (19%)

Query: 46  KNAPKLTRRKTKRIRGSRGLSFNA----TLVDAELCYLKPGWKNFALSELQAATDNFSHE 101
           KN PKLTRRK+KRIR     S N+    +  D+E    K  WKNF L+E+QAAT++FS +
Sbjct: 66  KNVPKLTRRKSKRIREEFIPSLNSPALQSSFDSEFMCFKSSWKNFTLAEIQAATNDFSQD 125

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM--- 158
           NLIG+GGYAEVY G+LEDG FVAIKRLTRG  EEMT D+LSELGIIVHVDHPNIA++   
Sbjct: 126 NLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGY 185

Query: 159 ------------------------------------IGYGVEGGMH-------------- 168
                                               I  G   G+H              
Sbjct: 186 GVEGGMFLVLQLSPHGSLSSLLYGPREKLNWSLRYRITLGTAEGLHYLHEGCQRRIIHKD 245

Query: 169 -----LILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDV 223
                ++L       ++    AKWLPD+WTHH VSK+EGTFGYLPPEFFMHGI DEKTDV
Sbjct: 246 IKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDV 305

Query: 224 YAYGVLLLEIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLI 276
           YAYGVLLLE+ITGRQALDSSQKSLVMW+       ++KELVDP L DAY+ EQ+  ++L 
Sbjct: 306 YAYGVLLLELITGRQALDSSQKSLVMWAKPLLTSNNIKELVDPVLDDAYDAEQMKLVILA 365

Query: 277 ASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSAS 336
           AS CI+Q+S  RP MS+VVQ LRG+EE+L +I++E Q   +L RT+SEE + AE++NS  
Sbjct: 366 ASMCIDQSSIQRPHMSQVVQILRGEEESL-RILKERQK-SKLHRTYSEELYAAEDYNSTK 423

Query: 337 LNELDVNDINRHMEIVLG 354
                ++D +R+ME +LG
Sbjct: 424 F----LSDRDRYMETILG 437

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736942|emb|CBI26143.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/369 (50%), Positives = 231/369 (62%), Gaps = 72/369 (19%)

Query: 50  KLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGY 109
           KL+R K++R RGS   +   +L DA LC +KP WK F+LSEL+ ATDNFSH+NLIG+GGY
Sbjct: 124 KLSRSKSRRARGSMIPALYPSL-DAGLCLMKPSWKAFSLSELETATDNFSHKNLIGEGGY 182

Query: 110 AEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL 169
           AEVYKGQL+DGQFVAIKR+ RG+PEEMT D+LSELGIIVH+DHPN AK++GYGVEGGMHL
Sbjct: 183 AEVYKGQLQDGQFVAIKRIIRGTPEEMTVDFLSELGIIVHIDHPNTAKLVGYGVEGGMHL 242

Query: 170 ILELSPHGSLASLLYAKWLPDKWT--HHIVSKIEGTFGYLP------------------- 208
           +L LSPHGSLASLLY+     +W   + I        GYL                    
Sbjct: 243 VLYLSPHGSLASLLYSPEKKLEWEIRYKIALGTAEGLGYLHEGGQRRIIHRDIKASNILL 302

Query: 209 -----------------PEFFMHGI--------------------ADEKTDVYAYGVLLL 231
                            PE   H I                     DEKTDVYAYGVLLL
Sbjct: 303 KEDFEPQISDFGLAKWLPEQCTHHIVSGFEGTFGYLPPEYFLHGIVDEKTDVYAYGVLLL 362

Query: 232 EIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASACINQT 284
           E+ITGR ALDSSQKSLVMW+       S+ ELVDP L DAY++EQ+  +  ++S C++Q+
Sbjct: 363 ELITGRPALDSSQKSLVMWAKPLLINNSIDELVDPRLADAYDSEQMNIVATVSSLCLHQS 422

Query: 285 SACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVND 344
           S  RP+M++VVQ L+G E+     + +      LQRT+SEE  DAEE+NS       +ND
Sbjct: 423 SVQRPRMNQVVQVLKGRED--ISTLGKRYQKPILQRTYSEELLDAEEYNSTK----HLND 476

Query: 345 INRHMEIVL 353
           ++RHMEI+L
Sbjct: 477 LSRHMEILL 485

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432446|ref|XP_002277125.1| PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Vitis vinifera]

 Score =  331 bits (848), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 185/369 (50%), Positives = 231/369 (62%), Gaps = 72/369 (19%)

Query: 50  KLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGY 109
           KL+R K++R RGS   +   +L DA LC +KP WK F+LSEL+ ATDNFSH+NLIG+GGY
Sbjct: 144 KLSRSKSRRARGSMIPALYPSL-DAGLCLMKPSWKAFSLSELETATDNFSHKNLIGEGGY 202

Query: 110 AEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL 169
           AEVYKGQL+DGQFVAIKR+ RG+PEEMT D+LSELGIIVH+DHPN AK++GYGVEGGMHL
Sbjct: 203 AEVYKGQLQDGQFVAIKRIIRGTPEEMTVDFLSELGIIVHIDHPNTAKLVGYGVEGGMHL 262

Query: 170 ILELSPHGSLASLLYAKWLPDKWT--HHIVSKIEGTFGYLP------------------- 208
           +L LSPHGSLASLLY+     +W   + I        GYL                    
Sbjct: 263 VLYLSPHGSLASLLYSPEKKLEWEIRYKIALGTAEGLGYLHEGGQRRIIHRDIKASNILL 322

Query: 209 -----------------PEFFMHGI--------------------ADEKTDVYAYGVLLL 231
                            PE   H I                     DEKTDVYAYGVLLL
Sbjct: 323 KEDFEPQISDFGLAKWLPEQCTHHIVSGFEGTFGYLPPEYFLHGIVDEKTDVYAYGVLLL 382

Query: 232 EIITGRQALDSSQKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASACINQT 284
           E+ITGR ALDSSQKSLVMW+       S+ ELVDP L DAY++EQ+  +  ++S C++Q+
Sbjct: 383 ELITGRPALDSSQKSLVMWAKPLLINNSIDELVDPRLADAYDSEQMNIVATVSSLCLHQS 442

Query: 285 SACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVND 344
           S  RP+M++VVQ L+G E+     + +      LQRT+SEE  DAEE+NS       +ND
Sbjct: 443 SVQRPRMNQVVQVLKGRED--ISTLGKRYQKPILQRTYSEELLDAEEYNSTK----HLND 496

Query: 345 INRHMEIVL 353
           ++RHMEI+L
Sbjct: 497 LSRHMEILL 505

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107299|ref|XP_002314438.1| predicted protein [Populus trichocarpa] gi|222863478|gb|EEF00609.1| predicted protein [Populus trichocarpa]

 Score =  325 bits (832), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 184/348 (52%), Positives = 227/348 (65%), Gaps = 77/348 (22%)

Query: 72  VDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG 131
           +D E C+ K  WKNF+LSEL AATD FS ENLIG+GGYAEVYKG+LEDGQFVAIKRLTRG
Sbjct: 95  LDGEFCHFKSSWKNFSLSELHAATDTFSQENLIGEGGYAEVYKGKLEDGQFVAIKRLTRG 154

Query: 132 SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAK----- 186
           SPE+MT D+LSELGI VHVDHPNIAK+IGYGVEGGMHL+LELS +GSLASLLY       
Sbjct: 155 SPEDMTVDFLSELGINVHVDHPNIAKVIGYGVEGGMHLVLELSVNGSLASLLYGPKEKLD 214

Query: 187 ----------------WLPDKWTHHIVSK-IEGT--------------FG---YLPPEF- 211
                           +L ++    I+ K I+ +              FG   +LP E+ 
Sbjct: 215 WRIRYKIALGTARGLLYLHEECQRRIIHKDIKASNILLTEDLEPQISDFGLAKWLPEEWS 274

Query: 212 ------------------FMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS-- 251
                             FMHGI DEKTDVYAYGVLLLE+ITGRQALDSSQ SLVMW+  
Sbjct: 275 HHTLSKIEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQHSLVMWAKP 334

Query: 252 -----SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALA 306
                S++ELVDP L DAY++EQ+ RL   AS CI+Q+ + RPQMS+VV+ L+GDE +  
Sbjct: 335 LLLNNSIEELVDPILADAYDSEQMDRLACTASMCIHQSPSERPQMSQVVRVLQGDESSF- 393

Query: 307 QIIEENQSLRRLQRTFS-EEFFDAEEFNSASLNELDVNDINRHMEIVL 353
                 + L++ QRT S EE +DA+E +S       ++D+N+ ME+VL
Sbjct: 394 ------EELKQRQRTPSIEELYDADENDSTEY----LSDLNQQMEVVL 431

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2144970	511	AT5G18910 [Arabidopsis thalian	0.509	0.362	0.595	3.5e-107
TAIR|locus:2096209	460	RBK2 "ROP binding protein kina	0.426	0.336	0.557	5.2e-79
TAIR|locus:2172555	579	AT5G57670 [Arabidopsis thalian	0.338	0.212	0.503	1.4e-52
TAIR|locus:2155700	456	AT5G65530 [Arabidopsis thalian	0.526	0.418	0.415	2.4e-37
TAIR|locus:2162848	429	AT5G35960 [Arabidopsis thalian	0.297	0.251	0.685	3.9e-37
TAIR|locus:2142514	467	RBK1 "ROP binding protein kina	0.696	0.541	0.354	1e-36
TAIR|locus:2059919	617	AT2G16750 [Arabidopsis thalian	0.457	0.269	0.322	1.5e-36
TAIR|locus:2038992	744	ALE2 "Abnormal Leaf Shape 2" [	0.294	0.143	0.428	3.1e-35
TAIR|locus:2077730	512	AT3G59110 [Arabidopsis thalian	0.435	0.308	0.348	1.8e-33
TAIR|locus:2132168	725	AT4G02010 [Arabidopsis thalian	0.363	0.182	0.381	1e-32

TAIR|locus:2144970 AT5G18910 [Arabidopsis thaliana (taxid:3702)]

 Score = 577 (208.2 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
 Identities = 118/198 (59%), Positives = 145/198 (73%)

Query:   168 HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
             +++L  +    ++    AKWLPD+WTHH VSK+EGTFGYLPPEFFMHGI DEKTDVYAYG
Sbjct:   320 NILLTQNFEAQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYG 379

Query:   228 VLLLEIITGRQALDSSQKSLVMWSS-------MKELVDPTLGDAYNTEQLTRLLLIASAC 280
             VLLLE+ITGRQALDSSQ S+VMW+        +K+LVDP L D Y+ E+L RL+ IAS C
Sbjct:   380 VLLLELITGRQALDSSQHSIVMWAKPLIKENKIKQLVDPILEDDYDVEELDRLVFIASLC 439

Query:   281 INQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNEL 340
             I+QTS  RPQMS+VV+ LRGD+ +L ++ E   S  +LQRT+SEE  D EE+NS      
Sbjct:   440 IHQTSMNRPQMSQVVEILRGDKCSLDKLRERENS--KLQRTYSEELLDNEEYNSTRY--- 494

Query:   341 DVNDINRHMEIVLGEDTD 358
              +NDINRHME VLG   D
Sbjct:   495 -LNDINRHMETVLGTSKD 511

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2096209 RBK2 "ROP binding protein kinases 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
 Identities = 92/165 (55%), Positives = 119/165 (72%)

Query:   185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ 244
             AKWLP + THH VSK EGTFGY  PE+FMHGI DEKTDV+A+GVLLLE+ITG  ALD SQ
Sbjct:   289 AKWLPKQLTHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVFAFGVLLLELITGHPALDESQ 348

Query:   245 KSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA 297
             +SLV+W+       ++KELVDP+LGD YN E+L RL   AS CI+Q+S  RP+MS+VV+ 
Sbjct:   349 QSLVLWAKPLLERKAIKELVDPSLGDEYNREELIRLTSTASLCIDQSSLLRPRMSQVVEL 408

Query:   298 LRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSAS-LNELD 341
             L G E+ +  +      ++ +QRT+SEE  D+ E+NS   L +LD
Sbjct:   409 LLGHEDVV--MTPREAKIKMMQRTYSEELLDSVEYNSTKYLGDLD 451

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0051020 "GTPase binding" evidence=IPI

TAIR|locus:2172555 AT5G57670 [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
 Identities = 66/131 (50%), Positives = 95/131 (72%)

Query:   185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ 244
             AKWLP+KWTHH V  +EGTFGYL PE  M G  DEKTD+YA+G+LLLEIITGR+ ++ +Q
Sbjct:   414 AKWLPNKWTHHAVIPVEGTFGYLAPESLMQGTIDEKTDIYAFGILLLEIITGRRPVNPTQ 473

Query:   245 KSLVMWS--SMK-----ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA 297
             K +++W+  +M+     ELVDP L D Y+ +Q+ +L+L AS C+ Q+   RP M++V++ 
Sbjct:   474 KHILLWAKPAMETGNTSELVDPKLQDKYDDQQMNKLVLTASHCVQQSPILRPTMTQVLEL 533

Query:   298 L-RGDEEALAQ 307
             L  G+E  +A+
Sbjct:   534 LTNGNEAEIAK 544

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002238 "response to molecule of fungal origin" evidence=RCA

TAIR|locus:2155700 AT5G65530 [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 89/214 (41%), Positives = 136/214 (63%)

Query:   148 VHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
             +H D P   ++I   ++   +++L       ++    AKWLP+ W HHIV  IEGTFGYL
Sbjct:   257 LHNDCPR--RIIHRDIKAS-NILLSQDYEAQISDFGLAKWLPEHWPHHIVFPIEGTFGYL 313

Query:   208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDS-SQKSLVMWS-------SMKELVDP 259
              PE+FMHGI DEKTDV+A+GVLLLEIITGR+A+D+ S++S+VMW+       +M+E+VDP
Sbjct:   314 APEYFMHGIVDEKTDVFAFGVLLLEIITGRRAVDTDSRQSIVMWAKPLLEKNNMEEIVDP 373

Query:   260 TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQ 319
              LG+ ++  ++ R++  AS CI+  S  RP M+++VQ LRGD+    Q+ E+     R  
Sbjct:   374 QLGNDFDETEMKRVMQTASMCIHHVSTMRPDMNRLVQLLRGDD----QLAEQKPGGAR-- 427

Query:   320 RTFSEEFFDAEEFNSASLNELDVNDINRHMEIVL 353
              T S +  D +  +S+ LN     D+ RH ++++
Sbjct:   428 -TVSLDDCDLDHTSSSYLN-----DLTRHRQLLM 455

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2162848 AT5G35960 [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 74/108 (68%), Positives = 92/108 (85%)

Query:    86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG 145
             F  S+L++AT+NFS ENLIG+GGYAEVYKG L +GQ VAIKRL RG+ EE+  D+LSE+G
Sbjct:   122 FTFSDLKSATNNFSLENLIGKGGYAEVYKGMLPNGQMVAIKRLMRGNSEEIIVDFLSEMG 181

Query:   146 IIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
             I+ HV+HPNIAK++GYGVEGGMHL+LELSPHGSLAS+LY+     KW+
Sbjct:   182 IMAHVNHPNIAKLLGYGVEGGMHLVLELSPHGSLASMLYSSKEKMKWS 229

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2142514 RBK1 "ROP binding protein kinases 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 100/282 (35%), Positives = 164/282 (58%)

Query:    88 LSELQAATDNFSHENLIGQGGYAEVYKGQ---LEDGQFVAIKRLTRGSPE--EMTTDYLS 142
             LSEL     + +H N     G++   +G    LE   + ++  +  GS E  E    Y  
Sbjct:   198 LSELGIIA-HVNHPNAARLRGFSSD-RGLHFVLEYAPYGSLASMLFGSEECLEWKIRYKV 255

Query:   143 ELGIIVHVDHPNIA---KMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSK 199
              LGI   + + + A   ++I   ++   +++L       ++    AKWLP+ W HH+V  
Sbjct:   256 ALGIADGLSYLHNACPRRIIHRDIKAS-NILLNHDYEAQISDFGLAKWLPENWPHHVVFP 314

Query:   200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDS-SQKSLVMWS------- 251
             IEGTFGYL PE+FMHGI DEK DV+A+GVLLLEIIT R+A+D+ S++S+V W+       
Sbjct:   315 IEGTFGYLAPEYFMHGIVDEKIDVFAFGVLLLEIITSRRAVDTASRQSIVAWAKPFLEKN 374

Query:   252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEE 311
             SM+++VDP LG+ +N  ++ R++L AS C++  +A RP M+++VQ LRG E+  A++ ++
Sbjct:   375 SMEDIVDPRLGNMFNPTEMQRVMLTASMCVHHIAAMRPDMTRLVQLLRG-EDGPAELQQK 433

Query:   312 NQSLRRLQRTFSEEFFDAEEFNSASLNELDVNDINRHMEIVL 353
                    +RT S    D ++  S+S     +N++ RH ++++
Sbjct:   434 AG-----ERTMSVNACDLQDHTSSSY----LNELRRHRQLLM 466

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009623 "response to parasitic fungus" evidence=IEP

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0012505 "endomembrane system" evidence=IDA

GO:0051020 "GTPase binding" evidence=IPI

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2059919 AT2G16750 [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
 Identities = 60/186 (32%), Positives = 102/186 (54%)

Query:   172 ELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLL 231
             E  P   L+    + W      + I   + GTFGYL PE+FM+G   +K DVYA+GV+LL
Sbjct:   410 EFEPQ--LSDFGLSMWGSKSCRYTIQRDVVGTFGYLAPEYFMYGKVSDKVDVYAFGVVLL 467

Query:   232 EIITGRQALDSS----QKSLVMWS-------SMKELVDPTLGDAYNTEQLTRLLLIASAC 280
             E+I+GR ++ S     Q+SLVMW+       + KEL+DP +   ++ +Q  +++L A+ C
Sbjct:   468 ELISGRTSISSDSPRGQESLVMWAKPMIEKGNAKELLDPNIAGTFDEDQFHKMVLAATHC 527

Query:   281 INQTSACRPQMSKVVQALRGDEEALAQI-IEENQSLRRLQRTFSEEFFDAEEFN-SASLN 338
             + + +  RP + ++++ LRG+++    + IEE+      +  F +E +         SL 
Sbjct:   528 LTRAATYRPNIKEILKLLRGEDDVSKWVKIEEDD-----EDGFDDEVYPNSNTELHLSLA 582

Query:   339 ELDVND 344
              +DV D
Sbjct:   583 MVDVED 588

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2038992 ALE2 "Abnormal Leaf Shape 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
 Identities = 51/119 (42%), Positives = 77/119 (64%)

Query:   193 THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS----LV 248
             + HI +++ GTFGY+ PE+ M G    K+DVY+YGV+LLE++TGR+ +D SQ S    LV
Sbjct:   499 SQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLV 558

Query:   249 MWS--------SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
              W+         +++LVDP L   YN + + ++  IAS C++Q  + RP M +VVQAL+
Sbjct:   559 TWARPLLANREGLEQLVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQALK 617

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010068 "protoderm histogenesis" evidence=IMP

GO:0042335 "cuticle development" evidence=IMP

GO:0048367 "shoot system development" evidence=IGI

GO:0048645 "organ formation" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

TAIR|locus:2077730 AT3G59110 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
 Identities = 61/175 (34%), Positives = 97/175 (55%)

Query:   168 HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
             +++++   +  L+    AK L D    HI +++ GTFGY+ PE+   G+ +EK+D+Y++G
Sbjct:   321 NILIDDDFNAKLSDFGLAKLL-DSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFG 379

Query:   228 VLLLEIITGRQALD----SSQKSLVMWSSM-------KELVDPTLGDAYNTEQLTRLLLI 276
             VLLLE ITGR  +D    +++ +LV W  M       +E+VD  +     T  L R LL+
Sbjct:   380 VLLLETITGRDPVDYERPANEVNLVEWLKMMVGTRRAEEVVDSRIEPPPATRALKRALLV 439

Query:   277 ASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEE 331
             A  C++  +  RP+MS+VV+ L  DE       EE ++  R  RT S E  +  E
Sbjct:   440 ALRCVDPEAQKRPKMSQVVRMLESDEHPFR---EERRN--RKSRTASMEIVETTE 489

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2132168 AT4G02010 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
 Identities = 55/144 (38%), Positives = 87/144 (60%)

Query:   168 HLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYG 227
             +++LE + +  +A    AK  P+   +H+ +++ GTFGY+ PE+ M G    K+DVY+YG
Sbjct:   513 NILLENNFNAKVADFGLAKQAPEGRGNHLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYG 572

Query:   228 VLLLEIITGRQALDSSQKS----LVMWSS--------MKELVDPTLGDAYNTEQLTRLLL 275
             V+LLE++TGR+ +D SQ S    LV W+         ++ELVD  L   Y  E   R+  
Sbjct:   573 VVLLELLTGRKPVDMSQPSGQENLVTWTRPVLRDKDRLEELVDSRLEGKYPKEDFIRVCT 632

Query:   276 IASACINQTSACRPQMSKVVQALR 299
             IA+AC+   ++ RP M +VVQ+L+
Sbjct:   633 IAAACVAPEASQRPTMGEVVQSLK 656

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G18910	protein kinase family protein; protein kinase family protein; FUNCTIONS IN- protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN- protein amino acid phosphorylation; LOCATED IN- peroxisome; EXPRESSED IN- 9 plant structures; EXPRESSED DURING- L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, core (InterPro-IPR000719), Serine/threonine protein kinase-related (Inte [...] (511 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	GAMMA_CA2	GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase; Encodes mitochondrial gamma carb [...] (278 aa)					•				0.518

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-14
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-12
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-12
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-11
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-10
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-09
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-08
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	8e-08
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	6e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	9e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	6e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	7e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	7e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.001
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.001
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.001
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.002
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.002
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.002
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.003
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.004
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.004
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 81.5 bits (202), Expect = 4e-18
 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 57/187 (30%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           +G+GG+  VY  +  + G+ VAIK + +     +  + L E+ I+  ++HPNI K+ G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 163 VEGG-MHLILELSPHGSLASLLYAKWLPDKWT------------------HHIV------ 197
            +   ++L++E    GSL  LL                            + I+      
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 198 ------------------------------SKIEGTFGYLPPEFFMH-GIADEKTDVYAY 226
                                           I GT  Y+ PE  +  G   EK+D+++ 
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSL 180

Query: 227 GVLLLEI 233
           GV+L E+
Sbjct: 181 GVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 42/190 (22%), Positives = 69/190 (36%), Gaps = 56/190 (29%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
           +G G +  VYK +    G+ VA+K L  R    +       E+ I+  + HPNI ++I  
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDA 66

Query: 162 GVEGG-MHLILELSPHGSLASLL-YAKWLPD----KWTHHIVSKIE-------------- 201
             +   ++L++E    G L   L     L +    K    I+  +E              
Sbjct: 67  FEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKP 126

Query: 202 ---------------------------------GTFGYLPPEFFMHGI-ADEKTDVYAYG 227
                                            GT  Y+ PE  + G     K DV++ G
Sbjct: 127 ENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLG 186

Query: 228 VLLLEIITGR 237
           V+L E++TG+
Sbjct: 187 VILYELLTGK 196

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 74.1 bits (183), Expect = 4e-15
 Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 53/193 (27%)

Query: 98  FSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           +     +G+G + +VY  +  + G+ VAIK + +   ++     L E+ I+  + HPNI 
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLLYAKW-LPDKWTHHIV----------------- 197
           ++     +   ++L++E    G L  LL  +  L +      +                 
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVH 120

Query: 198 -----------------------SKIE----------GTFGYLPPEFFMHGIADEKTDVY 224
                                  ++            GT  Y+ PE  +     +  D++
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIW 180

Query: 225 AYGVLLLEIITGR 237
           + GV+L E++TG+
Sbjct: 181 SLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 71.4 bits (176), Expect = 4e-14
 Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 61/202 (30%)

Query: 97  NFSHENLIGQGGYAEVYKGQLED-GQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDHP 153
            ++   L+G+G +  VY    +D G+ +A+K   L+  S EE+      E+ I+  + HP
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEEL-EALEREIRILSSLQHP 59

Query: 154 NIAKMIGYGVE---GGMHLILELSPHGSLASLLYAKW-LPD----KWTHHIVSKIE---- 201
           NI +  G   +     +++ LE    GSL+SLL     LP+    K+T  I+  +     
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119

Query: 202 ---------------------------------------------GTFGYLPPEFFMHGI 216
                                                        GT  ++ PE      
Sbjct: 120 NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179

Query: 217 ADEKTDVYAYGVLLLEIITGRQ 238
                D+++ G  ++E+ TG+ 
Sbjct: 180 YGRAADIWSLGCTVIEMATGKP 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 97  NFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPN 154
           N+   +LIG+G +  VYKG  LE G FVAIK+++     EE     + E+ ++ ++ HPN
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 155 IAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           I K IG       +++ILE + +GSL  ++
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQII 90

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 104 IGQGGYAEVYKGQLED-----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +G+G + EVYKG+L+         VA+K L   + E+   ++L E  I+  +DHPN+ K+
Sbjct: 7   LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKL 66

Query: 159 IGYGVEGGMH-LILELSPHGSLASLL 183
           +G   E     +++E    G L S L
Sbjct: 67  LGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 102 NLIGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
             +G+G + EVYKG+L+        VA+K L   + EE   D+L E  ++  + HPN+ +
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLL 183
           ++G   E   ++L+LE    G L   L
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 104 IGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +G+G + EVYKG L+         VA+K L  G+ EE   ++L E  I+  + HPNI ++
Sbjct: 7   LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66

Query: 159 IGYGVEGGMH-LILELSPHGSLASLL 183
           +G   +G    ++ E  P G L   L
Sbjct: 67  LGVCTQGEPLYIVTEYMPGGDLLDFL 92

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 66.0 bits (162), Expect = 2e-12
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 104 IGQGGYAEVYKGQLEDG-----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +G+G + EVYKG L+         VA+K L   + E+   ++L E  I+  +DHPNI K+
Sbjct: 7   LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKL 66

Query: 159 IGYGVEGGMH-LILELSPHGSLASLL 183
           +G   E     +++E  P G L   L
Sbjct: 67  LGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 65.4 bits (159), Expect = 3e-12
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           L+G+G + EV+KG L+D   VA+K      P+E+   +LSE  I+   DHPNI K+IG  
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 163 VE-GGMHLILELSPHGSLASLLYAK 186
            +   +++++EL P G   S L  K
Sbjct: 62  TQRQPIYIVMELVPGGDFLSFLRKK 86

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 55/188 (29%)

Query: 104 IGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-Y 161
           IG+GG+ EVYK      G+ VAIK + +   +E     ++E+ I+    HPNI K  G Y
Sbjct: 8   IGKGGFGEVYKARHKRTGKEVAIKVI-KLESKEKKEKIINEIQILKKCKHPNIVKYYGSY 66

Query: 162 GVEGGMHLILELSPHGSLASLLYAKW--LPDKW----------------THHIV------ 197
             +  + +++E    GSL  LL +    L +                  ++ I+      
Sbjct: 67  LKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKA 126

Query: 198 ----------------------------SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVL 229
                                       + + GT  ++ PE       D K D+++ G+ 
Sbjct: 127 ANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGIT 186

Query: 230 LLEIITGR 237
            +E+  G+
Sbjct: 187 AIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
            IG+G + +VYKG L+    VA+K      P ++   +L E  I+   DHPNI K+IG  
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 163 VEGG-MHLILELSPHGSLASLL 183
           V+   +++++EL P GSL + L
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL 83

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 59.5 bits (144), Expect = 4e-10
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 102 NLIGQGGYAEVYKGQLED-------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           N +G G + EVY+G   D          VA+K L +G+ ++   ++L E  ++ + +HPN
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 155 IAKMIGYGVEG-GMHLILELSPHGSLASLL 183
           I K++G  +     ++I+EL   G L S L
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDLLSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV +G+L    +    VAIK L  GS ++   D+L+E  I+   DHPNI 
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
           ++ G   +    +I+ E   +GSL   L
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 103 LIGQGGYAEVYKG---QLEDGQF-VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
            IG+G + +VY+G     E+ +  VA+K     +   +   +L E  I+   DHP+I K+
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 159 IGYGVEGGMHLILELSPHGSLASLL--YAKWLP 189
           IG   E  + +++EL+P G L S L      L 
Sbjct: 73  IGVITENPVWIVMELAPLGELRSYLQVNKYSLD 105

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 22/133 (16%)

Query: 104 IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G+G + +V+ G+        D + VA+K L   +  +   D+  E  ++ +  H NI K
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLLYA---------------KWLPDKWTHHIVSKIE 201
             G   EG    ++ E   HG L   L +                 L       I  +I 
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 202 GTFGYLPPEFFMH 214
               YL  + F+H
Sbjct: 133 SGMVYLASQHFVH 145

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           +N  +   IGQG +  V++ +       E    VA+K L   +  +M  D+  E  ++  
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLP 208
            DHPNI K++G    G  M L+ E   +G L   L  +    +    +            
Sbjct: 65  FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHR--SPRAQCSLSHSTSSARKCGL 122

Query: 209 P 209
            
Sbjct: 123 N 123

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV +G+L+       FVAIK L  G  E+   D+LSE  I+   DHPNI 
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
            + G   +    +I+ E   +G+L S L
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 102 NLIGQGGYAEVYKGQLE---DGQF--VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
             +G+G + +V   + +   D     VA+K L     E+  +D+  E+ I+  +DH NI 
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 157 KMIGYGVEGG---MHLILELSPHGSLASLL 183
           K  G   + G   + LI+E  P GSL   L
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLT--RGSPEEMTTDYLSELGIIVHVD 151
             NF  E  IG+G ++ VYK   L DG+ VA+K++        +   D L E+ ++  +D
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 152 HPNIAKMIGYGVEGGM-HLILELSPHGSLASLL 183
           HPN+ K +   +E    +++LEL+  G L+ ++
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMI 93

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 52.8 bits (127), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GY 161
           +G G + +VYK Q  E G F A K +   S EE+  D++ E+ I+    HPNI  +   Y
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELE-DFMVEIDILSECKHPNIVGLYEAY 71

Query: 162 GVEGGMHLILELSPHGSLASLL 183
             E  + +++E    G+L S++
Sbjct: 72  FYENKLWILIEFCDGGALDSIM 93

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 62/257 (24%)

Query: 97  NFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLT-RGSPEEMTTDYLSELGIIVHVDHPN 154
           +F   N IG+G +  V+K  +  D +  A+K++           + + E  ++  +D   
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW---LPDK--WT---------HHIVSK 199
           I +     ++ G +++++E + +G L  LL  +    LP+   W           H+ SK
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120

Query: 200 ----------------------------------------IEGTFGYLPPEFFMHGIADE 219
                                                   I GT  YL PE       +E
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNE 180

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
           K+DV+A GV+L E  TG+   D++ +  ++   ++ +  P +   Y ++QL +L+     
Sbjct: 181 KSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP-VSQMY-SQQLAQLI---DQ 235

Query: 280 CINQTSACRPQMSKVVQ 296
           C+ +    RP   ++++
Sbjct: 236 CLTKDYRQRPDTFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELG----IIVHVDHPNIAK 157
           L+G G +  VY+G  L+DG F A+K ++     +   + + +L     ++  + HPNI +
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLL 183
            +G   E   +++ LEL P GSLA LL
Sbjct: 67  YLGTEREEDNLYIFLELVPGGSLAKLL 93

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 54/247 (21%), Positives = 86/247 (34%), Gaps = 68/247 (27%)

Query: 104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           +GQG    VYK +    G+  A+K++     EE     L EL  +   + P + K   YG
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKC--YG 66

Query: 163 V---EGGMHLILELSPHGSLASLL-YAKWLPDKW-----------------THHI----- 196
               EG + ++LE    GSLA LL     +P+                     HI     
Sbjct: 67  AFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDI 126

Query: 197 -------------------VSKI-----------EGTFGYLPPEFFMHGIADE-KTDVYA 225
                              +SK+            GT  Y+ PE    G +     D+++
Sbjct: 127 KPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERI-QGESYSYAADIWS 185

Query: 226 YGVLLLEIITGRQALDSSQKSLVMWSSMKELVD---PTLGDAYNTEQLTRLLLIASACIN 282
            G+ LLE   G+            +  M+ + D   P+L     + +    +   SAC+ 
Sbjct: 186 LGLTLLECALGKFPF-LPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI---SACLQ 241

Query: 283 QTSACRP 289
           +    RP
Sbjct: 242 KDPKKRP 248

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 92  QAATDNFSHENLIGQGGYAEVYKGQL--EDG----QFVAIKRLTRGSPEEMTTDYLSELG 145
           +   D+ +    +G G + EVY+G     DG      VA+K L     E+  +D+L E  
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 146 IIVHVDHPNIAKMIGYGVEGGMHLI-LELSPHGSLASLL 183
           I+   +H NI ++IG   E     I LEL   G L S L
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 8/101 (7%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-Y 161
           +G G    V K      G+ +A+K +     E +    L EL I+   + P I    G +
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68

Query: 162 GVEGGMHLILELSPHGSLASLL--YAKWLPDKWTHHIVSKI 200
              G + + +E    GSL  +L      +P+     I+ KI
Sbjct: 69  YNNGDISICMEYMDGGSLDKILKEVQGRIPE----RILGKI 105

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 102 NLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVD---HPNIA 156
             IG+G Y  VYK + L  G+FVA+K++    S E +    L E+ ++  ++   HPNI 
Sbjct: 5   AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIV 64

Query: 157 KMI----GYGVEGGMHLIL 171
           +++    G   +  + L L
Sbjct: 65  RLLDVCHGPRTDRELKLTL 83

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 104 IGQGGYAEVYKG--QLEDGQF--VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           +G G +  V KG   ++ G+   VA+K L +        ++L E  ++  +DHP I ++I
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 160 GYGVEGGMHLILELSPHGSL 179
           G      + L++EL+P G L
Sbjct: 63  GVCKGEPLMLVMELAPLGPL 82

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 104 IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           IG+G + EV+ G+L  D   VA+K      P ++   +L E  I+    HPNI ++IG  
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 163 VEGG-MHLILELSPHGSLASLL 183
            +   +++++EL   G   + L
Sbjct: 63  TQKQPIYIVMELVQGGDFLTFL 84

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 104 IGQGGYAEVYKG----QLEDGQF-VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +G G +  VYKG    + E  +  VAIK L   +  +   + L E  ++  VDHP++ ++
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 159 IGYGVEGGMHLILELSPHGSL 179
           +G  +   + LI +L P G L
Sbjct: 75  LGICLSSQVQLITQLMPLGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  E+   D+LSE  I+   DHPNI 
Sbjct: 9   EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + ++ E   +GSL + L
Sbjct: 69  HLEGVVTKSKPVMIVTEYMENGSLDAFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 91  LQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIV- 148
           L   T  F    +IG+G Y +VYK    + GQ VAIK +     E+   +   E  I+  
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIM--DIIEDEEEEIKEEYNILRK 58

Query: 149 HVDHPNIAKMIG-------YGVEGGMHLILELSPHGSLASL 182
           + +HPNIA   G        G +  + L++EL   GS+  L
Sbjct: 59  YSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDL 99

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.0 bits (110), Expect = 7e-06
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 97  NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHP- 153
           ++     +G+G + EVY     D + VA+K L +   S  +    +L E+ I+  ++HP 
Sbjct: 1   SYRILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 154 NIAKMIGYGV-EGGMHLILELSPHGSLASLLYAKW----LPDKWTHHIVSKIEGTFGYLP 208
           NI K+  +   EG ++L++E    GSL  LL        L +     I+++I     YL 
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 209 PEFFMH 214
            +  +H
Sbjct: 119 SKGIIH 124

Length = 384

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 46.6 bits (110), Expect = 9e-06
 Identities = 21/81 (25%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YG 162
           +G G + +VYK + ++   +A  ++     EE   DY+ E+ I+   +HP I K++G + 
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 163 VEGGMHLILELSPHGSLASLL 183
            +G + +++E  P G++ +++
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIM 100

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
           +G G + +VYK Q ++   +A  ++     EE   DY+ E+ I+   DHPNI K++  + 
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 163 VEGGMHLILELSPHGSLASLL 183
            E  + +++E    G++ +++
Sbjct: 73  YENNLWILIEFCAGGAVDAVM 93

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 38/155 (24%)

Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSEL 144
           EL  +   F  E  +G+  + ++YKG L     +  Q VAIK L   +  +   ++  E 
Sbjct: 1   ELPLSAVRFMEE--LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEA 58

Query: 145 GIIVHVDHPNIAKMIG-------------YGVEGGMHLILEL-SPHGSL----------- 179
            ++  + HPNI  ++G             Y  +G +H  L + SPH  +           
Sbjct: 59  SLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVK 118

Query: 180 ASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMH 214
           +SL +  +L      HI  +I     YL   FF+H
Sbjct: 119 SSLDHGDFL------HIAIQIAAGMEYLSSHFFVH 147

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
            +G G ++  Y+ + ++ G  +A+K     R T    EE+      E+ ++  ++HP+I 
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
           +M+G   E    +L +E    GS++ LL
Sbjct: 67  RMLGATCEDSHFNLFVEWMAGGSVSHLL 94

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           ++G G +  VYKG  + +G+ V    AIK L   +  +   +++ E  I+  +DHP++ +
Sbjct: 14  VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 73

Query: 158 MIGYGVEGGMHLILELSPHGSL 179
           ++G  +   + L+ +L PHG L
Sbjct: 74  LLGVCLSPTIQLVTQLMPHGCL 95

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 103 LIGQGGYAEVYKGQLEDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
            +G G +  V +G+          VA+K L      ++  D+L E  I+  +DH N+ ++
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 159 IGYGVEGGMHLILELSPHGSLASLL 183
            G  +   + ++ EL+P GSL   L
Sbjct: 62  YGVVLTHPLMMVTELAPLGSLLDRL 86

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 102 NLIGQGGYAEVYKGQ-LEDGQFVAIKR--LTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
             IG+G + +VY  +   DG+   +K   L+  S +E   D L+E+ I+  ++HPNI K 
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKE-REDALNEVKILKKLNHPNIIKY 64

Query: 159 IGYGVEGGM-HLILELSPHGSLASLL 183
                E G   +++E +  G L+  +
Sbjct: 65  YESFEEKGKLCIVMEYADGGDLSQKI 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTD---YLSELGIIVHVDHPNIAKMI 159
           IG+G Y  VYK +    G+ VAIK++      E        L E+ ++  ++HPNI K++
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKL--RFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 160 G-YGVEGGMHLILEL 173
             +  +G ++L+ E 
Sbjct: 65  DVFRHKGDLYLVFEF 79

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELGIIV 148
           E +   D      ++G+G Y  VY  +    Q  +AIK +              E+ +  
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY-VQPLHEEIALHS 60

Query: 149 HVDHPNIAKMIGYGVEGGMHLI-LELSPHGSLASLLYAKWLPDK 191
           ++ H NI + +G   E G   I +E  P GSL++LL +KW P K
Sbjct: 61  YLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLK 104

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
           F    ++G G +  VYKG  + +G+     VAIK L   +  +   + L E  ++  VD+
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 153 PNIAKMIGYGVEGGMHLILELSPHGSL 179
           P++ +++G  +   + LI +L P G L
Sbjct: 69  PHVCRLLGICLTSTVQLITQLMPFGCL 95

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
            IG+G + +V  G    GQ VA+K L   S       +L+E  ++  + HPN+ +++G  
Sbjct: 13  TIGKGEFGDVMLGDYR-GQKVAVKCLKDDS--TAAQAFLAEASVMTTLRHPNLVQLLGVV 69

Query: 163 VEG-GMHLILELSPHGSLASLL 183
           ++G  ++++ E    GSL   L
Sbjct: 70  LQGNPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 26/133 (19%)

Query: 104 IGQGGYAEVYKGQLEDGQF---VAIKRL-----TRGSPEEMTTDYLSELGIIVHVDHPNI 155
           +G+G +  V +GQL        VA+K +     TR   E    D+LSE   +   DHPN+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEME----DFLSEAVCMKEFDHPNV 62

Query: 156 AKMIGYGVEGGMH-------LILELSPHGSLAS-LLYAK------WLPDKWTHHIVSKIE 201
            ++IG  ++           +IL    HG L S LLY++      +LP +     ++ I 
Sbjct: 63  MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIA 122

Query: 202 GTFGYLPPEFFMH 214
               YL  + F+H
Sbjct: 123 SGMEYLSSKSFIH 135

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 64/259 (24%)

Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHP 153
           NF  E  IG+G ++EVY+   L DG  VA+K++        +   D + E+ ++  ++HP
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLL-----YAKWLPDK--WTH--HIVSKIE-- 201
           N+ K     +E   ++++LEL+  G L+ ++       + +P+K  W +   + S +E  
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 202 ---------------------------------------------GTFGYLPPEFFMHGI 216
                                                        GT  Y+ PE      
Sbjct: 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 182

Query: 217 ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRLLL 275
            + K+D+++ G LL E+   +      + +L       E  D P L   + +E+L +L+ 
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV- 241

Query: 276 IASACINQTSACRPQMSKV 294
             + CIN     RP ++ V
Sbjct: 242 --NMCINPDPEKRPDITYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLT--RGSPEEMTTDYLSELGIIVHVDHP 153
           NF  E  IG+G ++EVY+   L D + VA+K++        +   D + E+ ++  ++HP
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           N+ K +   +E   ++++LEL+  G L+ ++
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMI 93

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)

Query: 101 ENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEE------MTTDYLSELGIIVHVDHP 153
              +G+G YA VYK    E G+ VAIK++  G  +E       T   L E+ ++  + HP
Sbjct: 5   GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTA--LREIKLLQELKHP 62

Query: 154 NIAKMIG-YGVEGGMHLILEL 173
           NI  ++  +G +  ++L+ E 
Sbjct: 63  NIIGLLDVFGHKSNINLVFEF 83

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.8 bits (103), Expect = 6e-05
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 104 IGQGGYAEVYKGQ------LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G+G + +V K              VA+K L   +      D LSE  ++  V+HP++ K
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 158 MIGY-GVEGGMHLILELSPHGSLASLL 183
           + G    +G + LI+E + +GSL S L
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFL 94

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 12/89 (13%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEM----TTDYLSELGIIVHVDHPNIAKM 158
           IG+G Y +VYK +  + G+ VA+K++ R   E+     T   + E+ ++  + HPNI ++
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKI-RMENEKEGFPITA--IREIKLLQKLRHPNIVRL 63

Query: 159 IGYGVE---GGMHLILELSPHGSLASLLY 184
                    G ++++ E   H  L  LL 
Sbjct: 64  KEIVTSKGKGSIYMVFEYMDH-DLTGLLD 91

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 14/96 (14%)

Query: 103 LIGQGGYAEVYKGQL--EDGQF--VAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           ++G+G +  V +GQL  +DG    VA+K  +L   +  E+  ++LSE   +   DHPN+ 
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIE-EFLSEAACMKDFDHPNVM 64

Query: 157 KMIGYGVEGGMH-------LILELSPHGSLASLLYA 185
           K+IG   E           +IL    HG L S L  
Sbjct: 65  KLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLY 100

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 43.8 bits (103), Expect = 7e-05
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 99  SHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           + + +IG G + EV++G L+        VAIK L  G  E+   D+LSE  I+    H N
Sbjct: 8   TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN 67

Query: 155 IAKMIG 160
           I ++ G
Sbjct: 68  IIRLEG 73

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 62/193 (32%)

Query: 104 IGQGGYAEVYKGQLED-GQFVAIK-----RLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G+G + +V   + +D G+  A+K     ++ +    E T   L+E  I+  ++HP I K
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHT---LTERNILSRINHPFIVK 57

Query: 158 MI-GYGVEGGMHLILELSPHGSLASLLY-AKWLPDKWTH--------------------- 194
           +   +  E  ++L+LE +P G L S L       ++                        
Sbjct: 58  LHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYR 117

Query: 195 -------------HIV------SKI-----------EGTFGYLPPEFFMHGIADEKTDVY 224
                        HI       +K             GT  YL PE  +     +  D +
Sbjct: 118 DLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWW 177

Query: 225 AYGVLLLEIITGR 237
           + GVLL E++TG+
Sbjct: 178 SLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 43.4 bits (102), Expect = 8e-05
 Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 61/198 (30%)

Query: 97  NFSHENL---IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
           N     L   IG+G +  V +G+   GQ VA+K +     +     +L E  ++  + H 
Sbjct: 4   NLQKLTLGEIIGEGEFGAVLQGEYT-GQKVAVKNI---KCDVTAQAFLEETAVMTKLHHK 59

Query: 154 NIAKMIGYGVEGGMHLILELSPHGSLASLLYAK----------------------WLPDK 191
           N+ +++G  +  G+++++EL   G+L + L  +                      +L  K
Sbjct: 60  NLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK 119

Query: 192 WTHH-------------IVSKIEGTFGY------------LP-----PEFFMHGIADEKT 221
              H              V+K+   FG             LP     PE   H     K+
Sbjct: 120 KLVHRDLAARNILVSEDGVAKVS-DFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKS 178

Query: 222 DVYAYGVLLLEIIT-GRQ 238
           DV++YGVLL E+ + GR 
Sbjct: 179 DVWSYGVLLWEVFSYGRA 196

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 37/109 (33%)

Query: 139 DYLSELGIIVH---------VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAK--- 186
           +YL+     VH         V    + K+  +G          LS           K   
Sbjct: 119 EYLASKKF-VHRDLAARNCLVGEDLVVKISDFG----------LSRDVYDDDYYRKKTGG 167

Query: 187 WLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
            LP +W              + PE    GI   K+DV+++GVLL EI T
Sbjct: 168 KLPIRW--------------MAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 14/46 (30%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEI 233
           LP KW               PPE F+ GI   KTDV+++GVLL EI
Sbjct: 183 LPIKWM--------------PPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 98  FSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           F+    IG+G + EVYK       Q VAIK +     E+   D   E+  +     P I 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 157 KMIGYGVEG-GMHLILELSPHGSLASLL 183
           K  G  ++G  + +I+E    GS   LL
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSCLDLL 90

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 8/137 (5%)

Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           F+    IG+G + EVYKG      + VAIK +     E+   D   E+ ++   D P I 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
           +  G  ++G  + +I+E    GS   LL    L + +   I+ +I     YL  E  +H 
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIH- 124

Query: 216 IADEKTDVYAYGVLLLE 232
                 D+ A  VLL E
Sbjct: 125 -----RDIKAANVLLSE 136

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 120 GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHLILELSPH 176
           G+ VA+K L R   ++ T+ +  E+ I+  + H NI K  G   E G   + LI+E  P 
Sbjct: 33  GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPL 92

Query: 177 GSLASLL 183
           GSL   L
Sbjct: 93  GSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 14/50 (28%)

Query: 186 KWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
             LP +W              + PE    G    K+DV+++GVLL EI T
Sbjct: 163 GKLPIRW--------------MAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
           ++ PE    G    K+DV+++GVLL EI T
Sbjct: 170 WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
           +G G + EV++G   +   VA+K L  G+ +    D+L+E  I+  + HP + ++  Y V
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP--KDFLAEAQIMKKLRHPKLIQL--YAV 69

Query: 164 ---EGGMHLILELSPHGSLASLL 183
              E  ++++ EL  +GSL   L
Sbjct: 70  CTLEEPIYIVTELMKYGSLLEYL 92

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 102 NLIGQGGYAEVYKGQL--EDGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVH-VDHPNIA 156
            +IG+G +  VY G L   DGQ    A+K L R +  E    +L E GII+    HPN+ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKE-GIIMKDFSHPNVL 59

Query: 157 KMIGYGV--EGGMHLILELSPHGSL 179
            ++G  +  EG   ++L    HG L
Sbjct: 60  SLLGICLPSEGSPLVVLPYMKHGDL 84

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 5/93 (5%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDG--QFVAIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   +++IG+G + +V K ++ +DG     AIKR+   + ++   D+  EL ++  +  
Sbjct: 7   NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 66

Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           HPNI  ++G     G ++L +E +PHG+L   L
Sbjct: 67  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 99

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-----YLSELGIIVHVDHPNIA 156
            ++G+G Y  VY G    GQ +A+K++   +   +  +        E+ ++  + H NI 
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
           + +G  ++   + + +E  P GS++S+L
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSIL 93

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 104 IGQGGYAEVYKG--QLEDGQF-VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
           +G G +  V KG  ++   Q  VAIK L   + + +  + + E  I+  +D+P I +MIG
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 161 YGVEGGMHLILELSPHGSLASLLYAK 186
                 + L++E++  G L   L  K
Sbjct: 63  VCEAEALMLVMEMASGGPLNKFLSGK 88

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 102 NLIGQGGYAEVYKG-QLEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           N IG G + +VY    L+ G+ +A+K  R+    P+    +   E+ ++  + HPN+ K 
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPK-TIKEIADEMKVLELLKHPNLVKY 64

Query: 159 IGYGVE---GGMHLILELSPHGSLASLL 183
             YGVE     +++ +E    G+L  LL
Sbjct: 65  --YGVEVHREKVYIFMEYCSGGTLEELL 90

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 58/194 (29%)

Query: 98  FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           F+ E  +G G + EV++G  ++   VAIK L          D+  E+  +  + H ++  
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLIS 66

Query: 158 MIGYGVEGG-MHLILELSPHGSL--------------ASLLYAKW--------LPDKWTH 194
           +      G  +++I EL   GSL              ASL+            L ++ + 
Sbjct: 67  LFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSI 126

Query: 195 H-------------IVSKIEGTFG---------YLP-----------PEFFMHGIADEKT 221
           H             +V K+   FG         YL            PE   HG    K+
Sbjct: 127 HRDLAARNILVGEDLVCKV-ADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKS 185

Query: 222 DVYAYGVLLLEIIT 235
           DV+++G+LL E+ T
Sbjct: 186 DVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 57/191 (29%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGI---IVHVDHPNIAKM 158
           LIG+G Y  VY+G  +  G+ VA+K +   +P++  +D   E+ +   +     PNI K 
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 159 IGYGVEG-GMHLILELSPHGSLASLLYAKWLPDKWTHHIV-------------------- 197
            G  ++G  + +I+E +  GS+ +L+ A  + +K+   I+                    
Sbjct: 68  YGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDI 127

Query: 198 -------------------------------SKIEGTFGYLPPEFFMHGIA-DEKTDVYA 225
                                          S   GT  ++ PE    G   D K D+++
Sbjct: 128 KAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWS 187

Query: 226 YGVLLLEIITG 236
            G+ + E+ TG
Sbjct: 188 LGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 26/150 (17%)

Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSE 143
           E+  +   F  E  +G+G + +VYKG+L           VAIK L   +  ++  ++  E
Sbjct: 1   EIPLSAVRFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQE 58

Query: 144 LGIIVHVDHPNIAKMIG-------------YGVEGGMH-LILELSPHGSLASLLYAKWLP 189
             ++  + HPNI  ++G             Y   G +H  ++  SPH  + +    + + 
Sbjct: 59  AELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVK 118

Query: 190 DKWTH----HIVSKIEGTFGYLPPEFFMHG 215
                    HI  +I     YL    F+H 
Sbjct: 119 SSLDCSDFLHIAIQIAAGMEYLSSHHFVHR 148

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 24/120 (20%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIK-----RLTRGSPEEMTTDY-------LS 142
           D+F    +IG+G ++ V   +  E  +  AIK     +L +    E    Y       L+
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK----EKKVKYVKIEKEVLT 56

Query: 143 ELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL-YAKWLPDKWTHHIVSKI 200
            L       HP I K+   +  E  ++ +LE +P+G L   +     L +K T    ++I
Sbjct: 57  RLN-----GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEI 111

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 59/192 (30%)

Query: 101 ENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           ++ +G G Y EVY+G  +     VA+K L   + E    ++L E  ++  + HPN+ +++
Sbjct: 11  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 68

Query: 160 GYGV-EGGMHLILELSPHGSLASLLYA---KWLPDKWTHHIVSKIEGTFGYLPPEFFMH- 214
           G    E   ++I E   +G+L   L     + +      ++ ++I     YL  + F+H 
Sbjct: 69  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 128

Query: 215 ---------------GIAD------------------------------------EKTDV 223
                           +AD                                     K+DV
Sbjct: 129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 188

Query: 224 YAYGVLLLEIIT 235
           +A+GVLL EI T
Sbjct: 189 WAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 41.4 bits (97), Expect = 7e-04
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS---QKSLVMWSS-------MKE 255
           Y+ PE        EK+D+Y +G++L+E++TG+   D+      S+V W+        +  
Sbjct: 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDM 903

Query: 256 LVDPTL-GDA-YNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
            +DP++ GD   N  ++  ++ +A  C       RP  + V++ L
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 9/77 (11%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTR--GSPEEMTTDYLSELGIIVHV-DHPNIAKMI 159
           IG+G ++EV K Q  + G++ AIK + +   S E++    L E+  +  +  HPNI ++I
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN--LREIQALRRLSPHPNILRLI 64

Query: 160 GYGVE---GGMHLILEL 173
               +   G + L+ EL
Sbjct: 65  EVLFDRKTGRLALVFEL 81

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 104 IGQGGYAEVYK-GQLEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           IG+G +  V+K    E G+ VA+K     RL  G P +     L E+  +    HP + K
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQA----LREIKALQACQHPYVVK 63

Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
           ++     G G  L++E  P   L+ +L
Sbjct: 64  LLDVFPHGSGFVLVMEYMPS-DLSEVL 89

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 207 LPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
           + PE    G    K+DV+++GVLL EI T 
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 20/147 (13%)

Query: 98  FSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHPNI 155
           F    L+G G Y +VYKG+ ++ GQ  AIK +   G  EE     ++ L    H  H NI
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNI 65

Query: 156 AKMIGY-------GVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHHIVSKIEGTFG 205
           A   G        G++  + L++E    GS+  L+       L ++W  +I  +I     
Sbjct: 66  ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 125

Query: 206 YLPPEFFMHGIADEKTDVYAYGVLLLE 232
           +L     +H       D+    VLL E
Sbjct: 126 HLHQHKVIH------RDIKGQNVLLTE 146

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 120 GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHLILELSPH 176
           G+ VA+K L   S      D   E+ I+ ++ H NI K  G   E G   + LI+E  P 
Sbjct: 33  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 92

Query: 177 GSLASLL 183
           GSL   L
Sbjct: 93  GSLKEYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSE 143
           E+  +T  F  E  +G+  + +VYKG L      E  Q VAIK L   +   +  ++  E
Sbjct: 1   EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 144 LGIIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
             +   + HPNI  ++G    E  + +I     H  L   L
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 103 LIGQGGYAEVYKGQ---LED--GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
            +G+G +  V   +   L+D  G+ VA+K+L   + E +  D+  E+ I+  + H NI K
Sbjct: 11  QLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-RDFEREIEILKSLQHDNIVK 69

Query: 158 MIGYGVEGG---MHLILELSPHGSLASLL 183
             G     G   + L++E  P+GSL   L
Sbjct: 70  YKGVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 98  FSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHPNI 155
           +     +G+G Y  VYK +  + G+ VA+K++   + EE + +  L E+ ++  + HPNI
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI 60

Query: 156 AKMI 159
            K++
Sbjct: 61  VKLL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV 163
           IG G +  V+ G   + + VAIK +  G+  E   D++ E  +++ + HP + ++ G   
Sbjct: 12  IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE--EDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 164 EGG-MHLILELSPHGSLASLLYAK 186
           E   + L+ E   HG L+  L A+
Sbjct: 70  ERSPICLVFEFMEHGCLSDYLRAQ 93

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 13/101 (12%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFVAIKR--LTRGSPEE-------MTTDYLSELGIIVHVDH 152
           LIG+G Y  VY    +  G+ +A+K+  L              M     SE+  +  +DH
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 153 PNIAKMIGY-GVEGGMHLILELSPHGSLASLL--YAKWLPD 190
            NI + +G+   E  + + LE  P GS+ S L  Y ++   
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQ 108

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 16/109 (14%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYK-GQLEDGQFVAIKRL--TRGSPEEMTTDY-- 140
             L  L   TD +     IG+G Y +VYK    +DG   A+K L       EE+  +Y  
Sbjct: 12  LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNI 71

Query: 141 LSELGIIVHVDHPNIAKMIG------YGVEGGMHLILELSPHGSLASLL 183
           L  L      +HPN+ K  G        V G + L+LEL   GS+  L+
Sbjct: 72  LQSLP-----NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELV 115

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 72/212 (33%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   E++IG+G + +V +  ++ DG  +  AIK L   + E    D+  EL ++  +  
Sbjct: 2   EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH 61

Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSL----------------------ASLLYAK-- 186
           HPNI  ++G     G +++ +E +P+G+L                      AS L ++  
Sbjct: 62  HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121

Query: 187 ------------WLPDKWTHH-------------IVSKI-------------EGTFGYLP 208
                       +L +K   H             + SKI             + T G LP
Sbjct: 122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLP 181

Query: 209 P-----EFFMHGIADEKTDVYAYGVLLLEIIT 235
                 E   + +   K+DV+++GVLL EI++
Sbjct: 182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 104 IGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-Y 161
           IG+G   EVYK      G+ VAIK++      +     ++E+ I+    HPNI      Y
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELI--INEILIMKDCKHPNIVDYYDSY 84

Query: 162 GVEGGMHLILELSPHGSLASLLY 184
            V   + +++E    GSL  ++ 
Sbjct: 85  LVGDELWVVMEYMDGGSLTDIIT 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)

Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPN 154
           +F     +G+G Y  VYK + L D QF A+K +  GS  ++   D ++E+ I+  V+HPN
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 155 IAKMIGYG---VEGG-MHLILELSPHGSLASLL 183
           I   I Y    ++G  + +++E +P G L+  +
Sbjct: 61  I---ISYKEAFLDGNKLCIVMEYAPFGDLSKAI 90

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           F+    IG+G + EV+KG      Q VAIK +     E+   D   E+ ++   D P + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
           K  G  ++G  + +I+E    GS   LL A    +     ++ +I     YL  E  +H 
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIH- 124

Query: 216 IADEKTDVYAYGVLLLE 232
                 D+ A  VLL E
Sbjct: 125 -----RDIKAANVLLSE 136

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKR-LTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-- 159
           IGQG + EV+K +  +  Q VA+K+ L     E      L E+ I+  + H N+  +I  
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 79

Query: 160 -------GYGVEGGMHLILELSPHGSLASLL 183
                      +G  +L+ E   H  LA LL
Sbjct: 80  CRTKATPYNRYKGSFYLVFEFCEH-DLAGLL 109

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
           I  KI GT  Y+ PE  +   A E TD+YA GV+L +++T
Sbjct: 187 IPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.0 bits (89), Expect = 0.003
 Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 11/174 (6%)

Query: 179 LASLLYAKWLPDKWTHHIV----SKIEGTFGYLPPEFFMHGI---ADEKTDVYAYGVLLL 231
           L     AK LPD  +   +    S   GT GY+ PE  +      A   +D+++ G+ L 
Sbjct: 143 LIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLY 202

Query: 232 EIITGR---QALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR 288
           E++TG    +   +S  +      + EL  P+L    +      +   AS  + +  A  
Sbjct: 203 ELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKD 262

Query: 289 PQMS-KVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELD 341
           P+        L  D  A  ++ E + S        +           A ++ L+
Sbjct: 263 PKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISSLN 316

Length = 384

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           F     +G+G Y  VYK    E GQ VAIK +     EE   + + E+ I+   D P I 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV---PVEEDLQEIIKEISILKQCDSPYIV 61

Query: 157 KMIG-YGVEGGMHLILELSPHGSLASLL 183
           K  G Y     + +++E    GS++ ++
Sbjct: 62  KYYGSYFKNTDLWIVMEYCGAGSVSDIM 89

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 38.0 bits (88), Expect = 0.004
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKG--QLEDGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E ++G G + E+ +G  +L   +   VAI  L  G  ++    +L+E   +   DH NI 
Sbjct: 10  ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIV 69

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
           ++ G    G  M ++ E   +G+L S L
Sbjct: 70  RLEGVITRGNTMMIVTEYMSNGALDSFL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 21/61 (34%), Positives = 40/61 (65%), Gaps = 6/61 (9%)

Query: 104 IGQGGYAEVYKGQ-LED-GQFVAIKRLTRGSPEE-MTTDYLSELGIIVHV---DHPNIAK 157
           IG+G Y +V+K + L++ G+FVA+KR+   + EE M    + E+ ++ H+   +HPN+ +
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 158 M 158
           +
Sbjct: 69  L 69

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.98
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.98
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.98
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
KOG0578	550	consensus p21-activated serine/threonine protein k	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0589	426	consensus Serine/threonine protein kinase [General	99.97
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.97
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.96
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.96
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.96
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.96
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.96
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.96
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.96
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.96
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.96
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.96
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.95
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.95
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.95
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.95
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.95
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.95
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.95
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.95
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.95
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.95
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.94
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.94
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.94
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.94
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.93
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.93
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.93
PHA03211	461	serine/threonine kinase US3; Provisional	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.93
PHA03207	392	serine/threonine kinase US3; Provisional	99.93
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.93
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.93
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.93
PHA03209	357	serine/threonine kinase US3; Provisional	99.93
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.93
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.93
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.93
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.93
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.93
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.93
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.93
KOG0586	596	consensus Serine/threonine protein kinase [General	99.93
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.93
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.92
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.92
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.92
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.92
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.92
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.92
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.92
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.92
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.92
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.91
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.91
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.91
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.91
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.91
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.9
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.9
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.9
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.89
PHA03210	501	serine/threonine kinase US3; Provisional	99.89
KOG3653	534	consensus Transforming growth factor beta/activin	99.89
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.89
PHA02882	294	putative serine/threonine kinase; Provisional	99.89
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.89
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.88
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.86
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.85
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.85
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.85
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.84
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.84
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.84
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.83
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.83
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.83
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.82
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.82
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.82
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.81
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.79
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.78
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.78
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.73
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.72
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.71
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.69
KOG1152	772	consensus Signal transduction serine/threonine kin	99.66
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.62
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.61
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.58
PLN00181	793	protein SPA1-RELATED; Provisional	99.47
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.42
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.37
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.35
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.34
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.29
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.22
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.18
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.15
PRK09188	365	serine/threonine protein kinase; Provisional	99.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.1
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.95
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.91
PRK10345	210	hypothetical protein; Provisional	98.84
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.79
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.7
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.69
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.64
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.64
PRK14879	211	serine/threonine protein kinase; Provisional	98.61
PRK12274	218	serine/threonine protein kinase; Provisional	98.59
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.55
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.48
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.47
smart00090	237	RIO RIO-like kinase.	98.39
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.34
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.29
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.13
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.12
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.95
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.84
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.8
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.75
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.51
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.39
KOG1243	690	consensus Protein kinase [General function predict	97.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.17
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.77
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.75
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.61
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.33
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.22
COG4248	637	Uncharacterized protein with protein kinase and he	96.12
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.93
PLN02876	822	acyl-CoA dehydrogenase	94.78
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.59
PRK10593	297	hypothetical protein; Provisional	94.14
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.33
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.22
PF01636	239	APH: Phosphotransferase enzyme family This family	92.35
COG0478	304	RIO-like serine/threonine protein kinase fused to	91.89
PRK09550	401	mtnK methylthioribose kinase; Reviewed	91.53
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	91.33
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	90.17
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	89.87
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	88.38
KOG3087	229	consensus Serine/threonine protein kinase [General	88.15
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	86.99
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	86.65
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	85.74
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	82.62
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	80.1

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-39  Score=305.83  Aligned_cols=218  Identities=45%  Similarity=0.808  Sum_probs=181.6

Q ss_pred             CCcccCHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           82 GWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        82 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      ....|++.++..+|++|...++||+|+||+||+|.+.+|..||||++....... .++|.+|+.++.+++|||||+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence            457899999999999999999999999999999999989999999987665442 4569999999999999999999999


Q ss_pred             EEcCC--eEEEEEccCCCChhhhhhhccC-CCCcee-----------------------------------------EE-
Q 048684          162 GVEGG--MHLILELSPHGSLASLLYAKWL-PDKWTH-----------------------------------------HI-  196 (363)
Q Consensus       162 ~~~~~--~~lv~E~~~~gsL~~~l~~~~~-~~~~~~-----------------------------------------~~-  196 (363)
                      |.+.+  .+||+|||++|+|.++|+.... +..|..                                         .+ 
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            99776  7999999999999999864322 111100                                         00 


Q ss_pred             --------------Eeec-ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCc----hhhHHHHH------
Q 048684          197 --------------VSKI-EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS----QKSLVMWS------  251 (363)
Q Consensus       197 --------------~~~~-~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~----~~~~~~~~------  251 (363)
                                    .... .||.+|+|||++..+.++.|+|||||||+|+||+||+.|.+..    ....+.|.      
T Consensus       220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~  299 (361)
T KOG1187|consen  220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE  299 (361)
T ss_pred             CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence                          0011 7999999999999999999999999999999999999988743    22345553      


Q ss_pred             -hhhhhcCCcCC-CCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          252 -SMKELVDPTLG-DAYNT-EQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       252 -~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                       .+.+++||.+. ..++. +....+..++..|++.+|..||+|.+|+++|..
T Consensus       300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~  351 (361)
T KOG1187|consen  300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG  351 (361)
T ss_pred             cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence             46788999987 55664 688889999999999999999999999998843

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4e-36  Score=283.18  Aligned_cols=203  Identities=25%  Similarity=0.456  Sum_probs=162.0

Q ss_pred             CccCCcccccCceEEEEEEEcCCcE-EEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEEEEc
Q 048684           98 FSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLILEL  173 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~~g~~-vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv~E~  173 (363)
                      +...+.||.|+||+||+|.+. |+. ||||.+.... .....+.|.+|+.+|.+++|||||+|+|+|.++.  ++|||||
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            344456999999999999997 555 9999997543 2222679999999999999999999999999885  8999999


Q ss_pred             cCCCChhhhhhhc----------------------cCCCCc--ee-----------------E---------------EE
Q 048684          174 SPHGSLASLLYAK----------------------WLPDKW--TH-----------------H---------------IV  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~----------------------~~~~~~--~~-----------------~---------------~~  197 (363)
                      +++|+|..+++..                      ++....  .|                 .               ..
T Consensus       122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~  201 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM  201 (362)
T ss_pred             CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence            9999999999531                      011111  10                 0               11


Q ss_pred             eecccccCCCCchhhc--cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFM--HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~--~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      +...||+.|||||++.  ...|+.|+|||||||+||||+||+.||.......+..........|.++...++.    +..
T Consensus       202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~----l~~  277 (362)
T KOG0192|consen  202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPH----LSS  277 (362)
T ss_pred             cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH----HHH
Confidence            1246999999999999  5699999999999999999999999999887756666666666666665555555    999


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhcChHHH
Q 048684          276 IASACINQTSACRPQMSKVVQALRGDEEAL  305 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~~~~~~  305 (363)
                      |+..||+.||..||++.+++..|+......
T Consensus       278 l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  278 LMERCWLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             HHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            999999999999999999999997665433

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-36  Score=269.74  Aligned_cols=199  Identities=23%  Similarity=0.368  Sum_probs=156.4

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv~E~  173 (363)
                      +++..+.||+|..|+||++.+ .+++.+|+|.+.........+++.+|++++++.+|||||.+||.+..+.  ..|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            455678899999999999995 6789999999977777777899999999999999999999999665544  8999999


Q ss_pred             cCCCChhhhhhhc--------------------cCC--CC-----------------------------ceeEEEeeccc
Q 048684          174 SPHGSLASLLYAK--------------------WLP--DK-----------------------------WTHHIVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~--------------------~~~--~~-----------------------------~~~~~~~~~~g  202 (363)
                      |.+|||++++...                    ++.  ..                             ....++.+.+|
T Consensus       160 MDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvG  239 (364)
T KOG0581|consen  160 MDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVG  239 (364)
T ss_pred             cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccc
Confidence            9999999987510                    000  00                             01113456689


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh----hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK----SLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      |..|||||-+.+..|+.++||||||++++||++|+.||.....    .......+.....|.++..   .++.++..++.
T Consensus       240 T~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~---~fS~ef~~FV~  316 (364)
T KOG0581|consen  240 TSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG---EFSPEFRSFVS  316 (364)
T ss_pred             cccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc---cCCHHHHHHHH
Confidence            9999999999999999999999999999999999999987521    1222222333334555443   24444999999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      .||++||.+|||+.|++++-
T Consensus       317 ~CL~Kdp~~R~s~~qLl~Hp  336 (364)
T KOG0581|consen  317 CCLRKDPSERPSAKQLLQHP  336 (364)
T ss_pred             HHhcCCcccCCCHHHHhcCH
Confidence            99999999999999999753

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-35  Score=271.20  Aligned_cols=205  Identities=19%  Similarity=0.253  Sum_probs=159.5

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchh------HHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE------MTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .+.|...+.||+|+||.|-+|. ..+|+.||||++++.....      ......+|+++|.+|+|||||++++++.... 
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            4568888999999999999997 6789999999997543211      1233569999999999999999999998877 


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------cCCCC-----------------------c
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------WLPDK-----------------------W  192 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------~~~~~-----------------------~  192 (363)
                      .|+||||+.||+|.+++.+.                               ..|+.                       .
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence            69999999999999887411                               01110                       0


Q ss_pred             eeEEEeecccccCCCCchhhccCC---CCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCCCHH
Q 048684          193 THHIVSKIEGTFGYLPPEFFMHGI---ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       193 ~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  268 (363)
                      ....+.++||||.|.|||++.+..   +..++|+||+|||||-+|||.+||.+........ ++..+.+.  +....+.+
T Consensus       331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--f~p~~w~~  408 (475)
T KOG0615|consen  331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--FGPLQWDR  408 (475)
T ss_pred             cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--ccChhhhh
Confidence            112345679999999999998765   3458899999999999999999999877666333 33333322  22335667


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+.+..+||.++|..||++|||+.+++++-+..
T Consensus       409 Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  409 ISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             hhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            788899999999999999999999999876543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.9e-37  Score=266.57  Aligned_cols=200  Identities=25%  Similarity=0.425  Sum_probs=152.5

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEE--EEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGY--GVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~--~~~~~-~~lv  170 (363)
                      .+|++.++||.|+||+||++. +.+|..||.|.++-+. ..........|+.+|++|+|||||+++++  ..+.. ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            457788999999999999998 7889999999998554 34456778999999999999999999983  33444 8999


Q ss_pred             EEccCCCChhhhhhh-----ccCCCC------------------------cee---------------------------
Q 048684          171 LELSPHGSLASLLYA-----KWLPDK------------------------WTH---------------------------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~-----~~~~~~------------------------~~~---------------------------  194 (363)
                      ||||.+|+|...+..     +.+++.                        ..|                           
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999988851     001100                        000                           


Q ss_pred             ----EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          195 ----HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                          ..+.+.+|||.||+||.+.+.+|+.||||||+||++|||+.-.+||.+.+..... ..+...--|.+   .....+
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~-~KI~qgd~~~~---p~~~YS  254 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC-KKIEQGDYPPL---PDEHYS  254 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH-HHHHcCCCCCC---cHHHhh
Confidence                0122357999999999999999999999999999999999999999987433333 23333221222   224556


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..+..||..|+..||..||+...++..+.
T Consensus       255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  255 TDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             hHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            66999999999999999999666555443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-34  Score=276.66  Aligned_cols=198  Identities=19%  Similarity=0.364  Sum_probs=157.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..|...+.||+|||+.||.++. .+|..||+|++.+..  .....+.+.+||+|++.|+|||||++++|+.+.. .|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4699999999999999999995 889999999997533  2334678999999999999999999999999877 89999


Q ss_pred             EccCCCChhhhhhhc-------------------------------------cCCCCce---------------eEEEee
Q 048684          172 ELSPHGSLASLLYAK-------------------------------------WLPDKWT---------------HHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------------~~~~~~~---------------~~~~~~  199 (363)
                      |+|++|+|..++..+                                     .+.....               ...-.+
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence            999999998887511                                     0111100               112346


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      +||||.|+|||++....++..+||||+|||||-||+|+|||...........+...  +-.+    |...+....+||.+
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~--~Y~~----P~~ls~~A~dLI~~  251 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN--EYSM----PSHLSAEAKDLIRK  251 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc--Cccc----ccccCHHHHHHHHH
Confidence            79999999999999999999999999999999999999999876544333332221  1122    22344558999999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      +|+.||.+|||+.+|+.+-.
T Consensus       252 lL~~~P~~Rpsl~~vL~h~F  271 (592)
T KOG0575|consen  252 LLRPNPSERPSLDEVLDHPF  271 (592)
T ss_pred             HhcCCcccCCCHHHHhcCHh
Confidence            99999999999999998643

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=264.70  Aligned_cols=198  Identities=23%  Similarity=0.392  Sum_probs=150.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||.|+||+||+|++ .+|..||||.+.... .....+.+..|+.+|+.++|||||.|++++..++ +||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            46899999999999999999994 568999999998664 4445677889999999999999999999998877 89999


Q ss_pred             EccCCCChhhhhhhcc-C------------------------------C------CC------cee--------------
Q 048684          172 ELSPHGSLASLLYAKW-L------------------------------P------DK------WTH--------------  194 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-~------------------------------~------~~------~~~--------------  194 (363)
                      |||.||+|.+||+.+. +                              |      ..      ...              
T Consensus        89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~  168 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG  168 (429)
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence            9999999999996320 0                              0      00      000              


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-hhhhcCCcCCCCCCHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-MKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      ....++||++-|||||++....|+.|+|+||+|+|||+|++|++||+........... ......|.+    +......+
T Consensus       169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~----~~~~s~~~  244 (429)
T KOG0595|consen  169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVL----PAELSNPL  244 (429)
T ss_pred             hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCch----hhhccCch
Confidence            0123468999999999999999999999999999999999999999976554433221 111112222    22223335


Q ss_pred             HHHHHHccccCCCCCCCHHHHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      .+++...+..+|..|-+..+-..
T Consensus       245 ~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  245 RELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             hhhhhHHHhcCccccCchHHhhh
Confidence            67777778888888877666554

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=273.87  Aligned_cols=199  Identities=23%  Similarity=0.387  Sum_probs=152.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ...+...+.||+|-||.||.|.+.....||||.++.....  ...|.+|+++|++|+|+|||+++|+|...+ +||||||
T Consensus       205 r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~--~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~  282 (468)
T KOG0197|consen  205 REELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS--PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY  282 (468)
T ss_pred             HHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC--hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence            3445566789999999999999986668999999876543  368999999999999999999999999866 9999999


Q ss_pred             cCCCChhhhhhhc---cCCC--------------------CceeE----------------E----Ee------------
Q 048684          174 SPHGSLASLLYAK---WLPD--------------------KWTHH----------------I----VS------------  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~---~~~~--------------------~~~~~----------------~----~~------------  198 (363)
                      |+.|+|.++|...   .+..                    ...|+                +    +.            
T Consensus       283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~  362 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE  362 (468)
T ss_pred             cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence            9999999999731   0000                    00000                0    00            


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...-...|.|||.+..+.++.|||||||||+||||+| |+.||.+.....+....-.+..-|.+ ..++.    .+.+|+
T Consensus       363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P-~~CP~----~vY~lM  437 (468)
T KOG0197|consen  363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP-EGCPD----EVYELM  437 (468)
T ss_pred             CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC-CCCCH----HHHHHH
Confidence            0012345999999999999999999999999999999 99999988766555443333322222 23444    499999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..||+.+|.+|||+..+...|+.
T Consensus       438 ~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  438 KSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             HHHhhCCcccCCCHHHHHHHHHH
Confidence            99999999999999988877653

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2e-34  Score=284.72  Aligned_cols=203  Identities=23%  Similarity=0.410  Sum_probs=160.5

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcC------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLED------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .+.+.+..+.||+|.||.||+|....      ...||||.++.....+...+|.+|+++++.++|||||+|+|.|.+++ 
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            34556677889999999999997432      35799999998887767899999999999999999999999999887 


Q ss_pred             eEEEEEccCCCChhhhhhhccCCCCce---------------eEEEeec-------------------------------
Q 048684          167 MHLILELSPHGSLASLLYAKWLPDKWT---------------HHIVSKI-------------------------------  200 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~~~~~~---------------~~~~~~~-------------------------------  200 (363)
                      +++|+|||.+|||..||....-.....               .+++.+|                               
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK  643 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK  643 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence            899999999999999997432111000               0001110                               


Q ss_pred             ----------------------ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          201 ----------------------EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       201 ----------------------~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                            .-...|||||.+..++||++||||||||||||++| |+.||.+.....+...+-.+.+
T Consensus       644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l  723 (774)
T KOG1026|consen  644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL  723 (774)
T ss_pred             ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc
Confidence                                  02356999999999999999999999999999998 9999998877766655544444


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                       -.    .+..++.++..|+..||+.+|.+||++++|-..|+..
T Consensus       724 -L~----~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  724 -LS----CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             -cc----CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence             22    3334445599999999999999999999999888643

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=4e-34  Score=270.05  Aligned_cols=195  Identities=22%  Similarity=0.390  Sum_probs=157.3

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..+....++-||+|+.|.||+|++. +..||||+++.-        -..+|+.|++|+||||+.|.|+|.... +|||||
T Consensus       122 PFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  122 PFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             CHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            3344455677999999999999996 788999987532        125789999999999999999999877 789999


Q ss_pred             ccCCCChhhhhhhccC-------------------------------------CCCceeEE--------------Eeecc
Q 048684          173 LSPHGSLASLLYAKWL-------------------------------------PDKWTHHI--------------VSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~-------------------------------------~~~~~~~~--------------~~~~~  201 (363)
                      ||+.|-|..+|.+...                                     .......|              ...++
T Consensus       193 fCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFa  272 (904)
T KOG4721|consen  193 FCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFA  272 (904)
T ss_pred             ccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhh
Confidence            9999999998863210                                     00000001              12367


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||..|||||++.+.+.+.|+|||||||||||||||..||.+-+.....|..-...+.-.++..++..    +.-|+.+||
T Consensus       273 GTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~G----fklL~Kqcw  348 (904)
T KOG4721|consen  273 GTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDG----FKLLLKQCW  348 (904)
T ss_pred             hhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchH----HHHHHHHHH
Confidence            9999999999999999999999999999999999999999888888888766666655555555555    888999999


Q ss_pred             ccCCCCCCCHHHHHHHhhcC
Q 048684          282 NQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..|.+||++.+++.+|.-.
T Consensus       349 ~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  349 NSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             hcCCCCCccHHHHHHHHhhc
Confidence            99999999999999998744

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=264.97  Aligned_cols=197  Identities=22%  Similarity=0.375  Sum_probs=156.6

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ..|...+.||+|.||.||+|. ..+++.||+|++.....+.......+|+.+|..++|+||.++||.+..+. ++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            456677899999999999998 57799999999987776666788999999999999999999999666555 8999999


Q ss_pred             cCCCChhhhhhhccC-CCCceeE---------------------------------------------------EEeecc
Q 048684          174 SPHGSLASLLYAKWL-PDKWTHH---------------------------------------------------IVSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~-~~~~~~~---------------------------------------------------~~~~~~  201 (363)
                      |.||++.+.|..... .+.....                                                   .-..++
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfv  172 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFV  172 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccccc
Confidence            999999988863322 1111000                                                   013457


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|||||++....|+.|+||||||++.+||++|.+|+.......+. ..+....+|.+.+.+++    .+.+++..||
T Consensus       173 GTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-flIpk~~PP~L~~~~S~----~~kEFV~~CL  247 (467)
T KOG0201|consen  173 GTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-FLIPKSAPPRLDGDFSP----PFKEFVEACL  247 (467)
T ss_pred             ccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-EeccCCCCCccccccCH----HHHHHHHHHh
Confidence            999999999999889999999999999999999999999866542111 12233344555554444    4999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.||..||++.+++++
T Consensus       248 ~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  248 DKNPEFRPSAKELLKH  263 (467)
T ss_pred             hcCcccCcCHHHHhhh
Confidence            9999999999999975

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=6.2e-32  Score=249.56  Aligned_cols=195  Identities=22%  Similarity=0.277  Sum_probs=147.1

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEc--C---CeEEEEEc
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVE--G---GMHLILEL  173 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~---~~~lv~E~  173 (363)
                      ...||+|++|.||+|.+ +|+.||||.+.....  ....+.|.+|+.+|.+++|||||+++|++.+  .   ..++||||
T Consensus        25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            36799999999999998 589999999975432  2335678899999999999999999998866  2   37899999


Q ss_pred             cCCCChhhhhhhcc--------------------CC--CCcee----------------EE------------Eeecccc
Q 048684          174 SPHGSLASLLYAKW--------------------LP--DKWTH----------------HI------------VSKIEGT  203 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------~~--~~~~~----------------~~------------~~~~~gt  203 (363)
                      |++|+|.+++....                    +.  ....|                .+            .....||
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  183 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF  183 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence            99999998874210                    00  00000                00            0123478


Q ss_pred             cCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          204 FGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       204 ~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      +.|+|||++.+  ..++.++|||||||++|||+||+.||..................+.++...    ...+.+++.+||
T Consensus       184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~----~~~l~~li~~cl  259 (283)
T PHA02988        184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDC----PLEIKCIVEACT  259 (283)
T ss_pred             ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcC----cHHHHHHHHHHh
Confidence            89999999976  689999999999999999999999998765443333333333333333223    345999999999


Q ss_pred             ccCCCCCCCHHHHHHHhhc
Q 048684          282 NQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~  300 (363)
                      +.||.+|||+.+++..|+.
T Consensus       260 ~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        260 SHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             cCCcccCcCHHHHHHHHHH
Confidence            9999999999999998853

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.98  E-value=3.7e-32  Score=257.08  Aligned_cols=203  Identities=24%  Similarity=0.405  Sum_probs=151.3

Q ss_pred             hcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ..++|.+.+.||+|+||.||+|..      .++..||||.+...........+.+|+.++..+ +|||||++++++....
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            446899999999999999999973      235689999997655444567899999999999 8999999999887543


Q ss_pred             --eEEEEEccCCCChhhhhhhccCC-------------------------------------------------------
Q 048684          167 --MHLILELSPHGSLASLLYAKWLP-------------------------------------------------------  189 (363)
Q Consensus       167 --~~lv~E~~~~gsL~~~l~~~~~~-------------------------------------------------------  189 (363)
                        .++|||||++|+|.+++......                                                       
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence              78999999999998777531000                                                       


Q ss_pred             ---------------------------C-Ccee----------------EE-----E------------eecccccCCCC
Q 048684          190 ---------------------------D-KWTH----------------HI-----V------------SKIEGTFGYLP  208 (363)
Q Consensus       190 ---------------------------~-~~~~----------------~~-----~------------~~~~gt~~y~a  208 (363)
                                                 . ...|                .+     .            ....+++.|+|
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence                                       0 0000                00     0            01124568999


Q ss_pred             chhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC
Q 048684          209 PEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSAC  287 (363)
Q Consensus       209 PE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  287 (363)
                      ||++.+..++.++|||||||+||||++ |..||.+..........+.....+..+...+    ..+.+|+..||+.||.+
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~cl~~dp~~  320 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENAT----PEIYRIMLACWQGDPKE  320 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCC----HHHHHHHHHHccCChhh
Confidence            999999999999999999999999997 9999987544333333333322222223333    44899999999999999


Q ss_pred             CCCHHHHHHHhhc
Q 048684          288 RPQMSKVVQALRG  300 (363)
Q Consensus       288 RPt~~evl~~L~~  300 (363)
                      |||+.++++.|+.
T Consensus       321 RPs~~el~~~l~~  333 (338)
T cd05102         321 RPTFSALVEILGD  333 (338)
T ss_pred             CcCHHHHHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.98  E-value=1.6e-32  Score=248.69  Aligned_cols=190  Identities=20%  Similarity=0.285  Sum_probs=149.8

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|++.++||+|+||.||.++ .++++.+|+|++++...  ....+....|..||.+++||.||.++..+.+.+ +|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4689999999999999999998 56799999999986542  234678899999999999999999988665554 9999


Q ss_pred             EEccCCCChhhhhhhc-cC------------------------------------CCC-------------c--eeEEEe
Q 048684          171 LELSPHGSLASLLYAK-WL------------------------------------PDK-------------W--THHIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-~~------------------------------------~~~-------------~--~~~~~~  198 (363)
                      +||+.||.|..+|... .+                                    ...             .  ......
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~  183 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR  183 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc
Confidence            9999999999888511 00                                    000             0  001234


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+|||+.|||||++.+..|+..+|+||+||++|||++|.+||.+.+.......+..+.+ +.++.-    .+....+++.
T Consensus       184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-~~~p~~----ls~~ardll~  258 (357)
T KOG0598|consen  184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-PLPPGY----LSEEARDLLK  258 (357)
T ss_pred             cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-CCCCcc----CCHHHHHHHH
Confidence            57999999999999999999999999999999999999999998876655555444431 122222    3344899999


Q ss_pred             HccccCCCCCC
Q 048684          279 ACINQTSACRP  289 (363)
Q Consensus       279 ~cl~~dP~~RP  289 (363)
                      ..+..||.+|.
T Consensus       259 ~LL~rdp~~RL  269 (357)
T KOG0598|consen  259 KLLKRDPRQRL  269 (357)
T ss_pred             HHhccCHHHhc
Confidence            99999999996

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.98  E-value=4.1e-32  Score=277.15  Aligned_cols=203  Identities=28%  Similarity=0.461  Sum_probs=156.7

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC--Cc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED--GQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~--g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .........||+|.||.||.|+..+  |.    .||||.+.+....+....|++|..+|++++|||||+++|+|.+.. .
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            4556677889999999999998533  43    399999998888888899999999999999999999999998866 7


Q ss_pred             EEEEEccCCCChhhhhhhccCCC----------------------------CceeE-------------EEe--------
Q 048684          168 HLILELSPHGSLASLLYAKWLPD----------------------------KWTHH-------------IVS--------  198 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~~----------------------------~~~~~-------------~~~--------  198 (363)
                      +|++|||.+|+|..||.......                            .+.|+             ++.        
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence            88999999999999996321000                            00000             000        


Q ss_pred             --------ec----ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCC
Q 048684          199 --------KI----EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAY  265 (363)
Q Consensus       199 --------~~----~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (363)
                              ..    .-...|||||.+..+.+|.|+|||||||+|||++| |..||.+.+...++.....+. .-.    .
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~----~  925 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLD----P  925 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccC----C
Confidence                    00    01246999999999999999999999999999999 899998877665554344433 111    2


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      +..+...+.++|..||+.+|++||++..+++.+..+.
T Consensus       926 P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  926 PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence            3334445899999999999999999999999765443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-32  Score=261.00  Aligned_cols=212  Identities=21%  Similarity=0.369  Sum_probs=167.6

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG  165 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  165 (363)
                      +..++.+..+.+.+...||+|.||+||+|.+. | .||||.++... ..+..+.|.+|+.++++-+|-||+-|.|||..+
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            34556666677888899999999999999985 3 49999998554 445688999999999999999999999999999


Q ss_pred             CeEEEEEccCCCChhhhhhh--------------------------c------------cCCCCceeEE-----------
Q 048684          166 GMHLILELSPHGSLASLLYA--------------------------K------------WLPDKWTHHI-----------  196 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~--------------------------~------------~~~~~~~~~~-----------  196 (363)
                      ++.||+-+|.|-+|+.+|+-                          +            ++.++....|           
T Consensus       461 ~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~  540 (678)
T KOG0193|consen  461 PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR  540 (678)
T ss_pred             ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence            99999999999999999871                          0            0111111111           


Q ss_pred             ------EeecccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          197 ------VSKIEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       197 ------~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                            ..+-.|...|||||++..   .+|++.+||||||||+|||+||..||.....+...|+.-.+.+.|.+.. ...
T Consensus       541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~-~~s  619 (678)
T KOG0193|consen  541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSK-IRS  619 (678)
T ss_pred             eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchh-hhc
Confidence                  111237888999999964   4799999999999999999999999997777777777766655554432 223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .....+.+|+..||..++++||.+.+|+..|+..
T Consensus       620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  620 NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence            4455699999999999999999999999987543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-31  Score=246.27  Aligned_cols=202  Identities=20%  Similarity=0.321  Sum_probs=158.5

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-GGMHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~lv~E  172 (363)
                      .++|+...+||.|.-++||+|. .+.+..||||+++..........+.+|+..|+.++|||||+++..+.. ..+|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            3689999999999999999998 678999999999866655557889999999999999999999996554 55999999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------------------------CC---CCce
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------------------------LP---DKWT  193 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------------------------~~---~~~~  193 (363)
                      ||.+||+.+++....                                                        +.   ....
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~  184 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV  184 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceee
Confidence            999999998875100                                                        00   0111


Q ss_pred             eEEEeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC----CCCCCH
Q 048684          194 HHIVSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL----GDAYNT  267 (363)
Q Consensus       194 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  267 (363)
                      .+. ..++||++|||||++..  ..|+.|+|||||||+..||++|..||.......+....+.+..+...    ......
T Consensus       185 ~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k  263 (516)
T KOG0582|consen  185 TRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDK  263 (516)
T ss_pred             Eee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhh
Confidence            111 56789999999999643  46999999999999999999999999987766555554444332111    111223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....+.+++..||+.||.+|||+.+++++
T Consensus       264 ~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  264 KFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             hhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            355679999999999999999999999974

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=261.25  Aligned_cols=199  Identities=20%  Similarity=0.333  Sum_probs=156.8

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCCeEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~~lv~E  172 (363)
                      ...|....+||+|..|.||.+. ..+++.||||++....... .+-+++|+.+|+..+|+|||.++. |....++|+|||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            4568888899999999999997 6779999999998655332 466889999999999999999998 555666999999


Q ss_pred             ccCCCChhhhhhhccCCC--------------------Ccee-------------------------E------EEeecc
Q 048684          173 LSPHGSLASLLYAKWLPD--------------------KWTH-------------------------H------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~~--------------------~~~~-------------------------~------~~~~~~  201 (363)
                      ||+||+|.|.+....+.+                    ...|                         +      .-..++
T Consensus       351 ym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmV  430 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMV  430 (550)
T ss_pred             ecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccccc
Confidence            999999988774211100                    0000                         0      112357


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |||.|||||++....|++|+||||||++++||+-|.+||-.+..-..+|.+..... |.+  ..+...+..+.+++.+||
T Consensus       431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~-P~l--k~~~klS~~~kdFL~~cL  507 (550)
T KOG0578|consen  431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PKL--KNPEKLSPELKDFLDRCL  507 (550)
T ss_pred             CCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC-CCc--CCccccCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999987655555554433322 222  235556677999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.|+.+||++.++|++
T Consensus       508 ~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  508 VVDVEQRASAKELLEH  523 (550)
T ss_pred             hcchhcCCCHHHHhcC
Confidence            9999999999999985

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=2.1e-32  Score=258.40  Aligned_cols=195  Identities=21%  Similarity=0.339  Sum_probs=157.0

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|.+.+.||+|+||.||||+ ..+++.||+|.+.+.. .+...+.+.+|++|++.++|||||.+++++.... +++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            578888999999999999998 5678999999997544 4556788999999999999999999999777654 999999


Q ss_pred             ccCCCChhhhhhhc--------------------------cCCC--------------------------CceeEEEeec
Q 048684          173 LSPHGSLASLLYAK--------------------------WLPD--------------------------KWTHHIVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~~--------------------------~~~~--------------------------~~~~~~~~~~  200 (363)
                      ||.| +|..+|...                          .+..                          .....+.+.+
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            9987 998887511                          0000                          1122356678


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      .|||.|||||++.+..|+..+|+||+|||+|||.+|++||...........+..+.+.      ++...+..+..++...
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~------~p~~~S~~f~nfl~gL  234 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK------PPSTASSSFVNFLQGL  234 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC------CcccccHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999876544443333333222      3345666799999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      |.+||..|.|..+++.+
T Consensus       235 L~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  235 LIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             hhcChhhcccHHHHhcC
Confidence            99999999999999875

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=256.73  Aligned_cols=210  Identities=26%  Similarity=0.419  Sum_probs=159.7

Q ss_pred             HHHHHhcCCCccCCcccccCceEEEEEEEc--CC--cE-EEEEEecC--CCchhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           89 SELQAATDNFSHENLIGQGGYAEVYKGQLE--DG--QF-VAIKRLTR--GSPEEMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        89 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~g--~~-vAvK~~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      ..++...++....++||+|+||.||+|.+.  ++  .. ||||....  .........|++|+++|+.++|||||++||+
T Consensus       150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV  229 (474)
T KOG0194|consen  150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV  229 (474)
T ss_pred             cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            344455566777799999999999999853  23  23 89999874  2345567899999999999999999999998


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhcc--------------------------------------CCCCceeEE------
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI------  196 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~------  196 (363)
                      +.... ++||||+|.||+|.++|....                                      +.......+      
T Consensus       230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs  309 (474)
T KOG0194|consen  230 AVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS  309 (474)
T ss_pred             EcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence            88765 899999999999999996211                                      011111000      


Q ss_pred             -------Eee-c-ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCC
Q 048684          197 -------VSK-I-EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYN  266 (363)
Q Consensus       197 -------~~~-~-~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (363)
                             ... . .-...|+|||.+..+.|+.++|||||||++||+++ |..||.+.....+...+.........+... 
T Consensus       310 ~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~-  388 (474)
T KOG0194|consen  310 RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKT-  388 (474)
T ss_pred             cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCC-
Confidence                   000 0 12367999999999999999999999999999999 899999887766665554554444443333 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                         +..+..++.+||..+|..||||.++.+.|+...
T Consensus       389 ---p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~  421 (474)
T KOG0194|consen  389 ---PKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE  421 (474)
T ss_pred             ---HHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence               344888899999999999999999999886543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=4.1e-32  Score=255.80  Aligned_cols=202  Identities=18%  Similarity=0.267  Sum_probs=152.4

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ..++|+.+.+||+|+||.||+++ ..+|.++|+|++++...  ...++.+..|-.+|...++|+||+||..+.+.. +||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45789999999999999999998 67799999999986542  234678999999999999999999998777766 999


Q ss_pred             EEEccCCCChhhhhhh-------------------------------c--------------------------------
Q 048684          170 ILELSPHGSLASLLYA-------------------------------K--------------------------------  186 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~-------------------------------~--------------------------------  186 (363)
                      ||||+|||++..+|..                               .                                
T Consensus       219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~  298 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE  298 (550)
T ss_pred             EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence            9999999999877730                               0                                


Q ss_pred             --------------cCCCCce-----e-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHH
Q 048684          187 --------------WLPDKWT-----H-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLL  230 (363)
Q Consensus       187 --------------~~~~~~~-----~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl  230 (363)
                                    ..+....     .                 ..+...+|||.|||||++.+..|+..+|+||+|||+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im  378 (550)
T KOG0605|consen  299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM  378 (550)
T ss_pred             hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence                          0000000     0                 012235799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHHh
Q 048684          231 LEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ---MSKVVQAL  298 (363)
Q Consensus       231 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~L  298 (363)
                      ||||.|.+||.++.......+++.-...-..+  .......+..+||.+|+. ||.+|..   +.||-++-
T Consensus       379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP--~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HP  446 (550)
T KOG0605|consen  379 YEMLVGYPPFCSETPQETYRKIVNWRETLKFP--EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHP  446 (550)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC--CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCC
Confidence            99999999999876554433322211110111  111223568999999999 9999965   77776543

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=8.3e-31  Score=247.39  Aligned_cols=205  Identities=19%  Similarity=0.255  Sum_probs=150.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||+|+||.||++.. .+|..||+|.+...........+.+|++++.+++||||+++++++...+ .++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            36899999999999999999985 5688999999876544445678999999999999999999999877665 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------CCC--Ccee-----------------------------EEEeecc
Q 048684          173 LSPHGSLASLLYAKW--------------------LPD--KWTH-----------------------------HIVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------~~~--~~~~-----------------------------~~~~~~~  201 (363)
                      |+++|+|.+++....                    +..  ...|                             .......
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence            999999988874210                    000  0000                             0011235


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh----------------------------
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM----------------------------  253 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~----------------------------  253 (363)
                      ||+.|+|||++.+..++.++|||||||++|||+||+.||.............                            
T Consensus       164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (331)
T cd06649         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGH  243 (331)
T ss_pred             CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccc
Confidence            8999999999999999999999999999999999999997543221110000                            


Q ss_pred             --------------hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          254 --------------KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       254 --------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                    ..+.....+..........+.+|+.+||+.||.+|||+.+++++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~  303 (331)
T cd06649         244 GMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF  303 (331)
T ss_pred             ccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence                          0000000000001123456899999999999999999999998654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=6e-31  Score=252.56  Aligned_cols=203  Identities=22%  Similarity=0.348  Sum_probs=151.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ..++|...+.||+|+||+||+|..      .++..||||.+...........+.+|+.++..+ +|||||++++++..+.
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            346789999999999999999963      235689999997554444457889999999999 8999999999887766


Q ss_pred             -eEEEEEccCCCChhhhhhhccCC--------------------------------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWLP--------------------------------------------------------  189 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~~--------------------------------------------------------  189 (363)
                       .++|||||++|+|.+++......                                                        
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence             88999999999998877431100                                                        


Q ss_pred             ----------------------------------------CCceeE----------------E-----------------
Q 048684          190 ----------------------------------------DKWTHH----------------I-----------------  196 (363)
Q Consensus       190 ----------------------------------------~~~~~~----------------~-----------------  196 (363)
                                                              ....|.                +                 
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence                                                    000000                0                 


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....++..|+|||++.+..++.++|||||||++|||+| |..||.........+..+.....+..+...+    ..+.+
T Consensus       273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~  348 (375)
T cd05104         273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAP----SEMYD  348 (375)
T ss_pred             cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCC----HHHHH
Confidence            000113456999999999999999999999999999998 8999976554434344333332222222223    35899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhc
Q 048684          276 IASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      |+..||+.||.+|||+.+|++.|+.
T Consensus       349 li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHh
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.9e-31  Score=243.53  Aligned_cols=199  Identities=22%  Similarity=0.409  Sum_probs=148.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-cC--CeEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV-EG--GMHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~--~~~lv~  171 (363)
                      .+|...+.||+|+||+||++.. ++|...|||.+....... .+.+.+|+.+|.+++|||||+++|... ..  .+++.|
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            4677789999999999999985 459999999997664333 567899999999999999999999633 33  378999


Q ss_pred             EccCCCChhhhhhhcc--CCCC-------------------------------------ce------------------e
Q 048684          172 ELSPHGSLASLLYAKW--LPDK-------------------------------------WT------------------H  194 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--~~~~-------------------------------------~~------------------~  194 (363)
                      ||+++|+|.+++....  +++.                                     +.                  .
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~  175 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS  175 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence            9999999999875211  1110                                     00                  0


Q ss_pred             EEEeecccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCc-hhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSS-QKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      .....+.||+.|||||++..+. ...++|||||||++.||+||++||... ...............|.++..    .+..
T Consensus       176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~----ls~~  251 (313)
T KOG0198|consen  176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDS----LSDE  251 (313)
T ss_pred             cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcc----cCHH
Confidence            1122356999999999998643 345999999999999999999999862 222222222222233444444    4445


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..+++..|+..||..|||+.+++++..
T Consensus       252 a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  252 AKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhhChh
Confidence            999999999999999999999998754

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=6e-31  Score=239.74  Aligned_cols=194  Identities=29%  Similarity=0.506  Sum_probs=140.7

Q ss_pred             cCCcccccCceEEEEEEEc-----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684          100 HENLIGQGGYAEVYKGQLE-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ..+.||.|.||.||+|.+.     .+..|+||.++..........|.+|++++++++||||++++|++...+ .++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3467999999999999965     257899999976555555789999999999999999999999999544 8999999


Q ss_pred             cCCCChhhhhhhc---cCC------------------------------------CCceeEE-----------------E
Q 048684          174 SPHGSLASLLYAK---WLP------------------------------------DKWTHHI-----------------V  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~---~~~------------------------------------~~~~~~~-----------------~  197 (363)
                      |++|+|.++|...   .++                                    ......+                 .
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~  162 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND  162 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999988632   000                                    0000000                 0


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....+...|+|||++....++.++||||||+++|||+| |+.||............ .....+..+..++..    +.++
T Consensus       163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~l  237 (259)
T PF07714_consen  163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKD----IYSL  237 (259)
T ss_dssp             TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHH----HHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccceeccchhHH----HHHH
Confidence            11235677999999999999999999999999999999 78999776444333232 222222223334444    8899


Q ss_pred             HHHccccCCCCCCCHHHHHHHh
Q 048684          277 ASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +..||+.||.+|||+.++++.|
T Consensus       238 i~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  238 IQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=2.4e-30  Score=236.44  Aligned_cols=200  Identities=21%  Similarity=0.323  Sum_probs=149.3

Q ss_pred             CCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|.+.+.||+|+||.||+|.+.    .+..||+|.+...........|.+|+.++..++||||++++|++..+. .++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            56888899999999999999742    356899999986655555678999999999999999999999877655 8999


Q ss_pred             EEccCCCChhhhhhhcc--CCC------------------------------------CceeEE--------------E-
Q 048684          171 LELSPHGSLASLLYAKW--LPD------------------------------------KWTHHI--------------V-  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~~~------------------------------------~~~~~~--------------~-  197 (363)
                      |||+++|+|.+++....  ++.                                    .....+              . 
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~  164 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT  164 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc
Confidence            99999999998875210  000                                    000000              0 


Q ss_pred             -eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          198 -SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       198 -~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                       ....++..|+|||++.+..++.++|||||||++||+++ |..||........... +.....+..+...    ...+.+
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~  239 (266)
T cd05064         165 TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA-VEDGFRLPAPRNC----PNLLHQ  239 (266)
T ss_pred             ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HHCCCCCCCCCCC----CHHHHH
Confidence             01124568999999999999999999999999999775 9999987654332222 2222222222223    345899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhc
Q 048684          276 IASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ++..||+.+|..||++.++++.|..
T Consensus       240 li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         240 LMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             HHHHHcCCCchhCCCHHHHHHHHHh
Confidence            9999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=2.5e-30  Score=248.13  Aligned_cols=203  Identities=24%  Similarity=0.380  Sum_probs=151.2

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-c-----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-E-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~-----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ..++|+..+.||+|+||.||+|.. .     ++..||||.+...........+.+|+.+++.+ +|||||++++++...+
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            345799999999999999999873 2     24579999997655444467789999999999 8999999999887765


Q ss_pred             -eEEEEEccCCCChhhhhhhccC---------------------------------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL---------------------------------------------------------  188 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  188 (363)
                       .++|||||++|+|.+++.....                                                         
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence             8899999999999887642100                                                         


Q ss_pred             ---------------------------------C-CCcee----------------EE-----E------------eecc
Q 048684          189 ---------------------------------P-DKWTH----------------HI-----V------------SKIE  201 (363)
Q Consensus       189 ---------------------------------~-~~~~~----------------~~-----~------------~~~~  201 (363)
                                                       . ....|                .+     .            ....
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                                             0 00000                00     0            0011


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +++.|||||++.+..++.++|||||||++|||++ |+.||.........+........+..+...+    ..+.+++.+|
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~c  351 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAP----PEIYSIMKMC  351 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCC----HHHHHHHHHH
Confidence            3457999999998999999999999999999997 9999976544333333333333333323233    3489999999


Q ss_pred             cccCCCCCCCHHHHHHHhhc
Q 048684          281 INQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L~~  300 (363)
                      |+.||.+|||+.+|++.|+.
T Consensus       352 l~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         352 WNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             cCCChhhCcCHHHHHHHHHH
Confidence            99999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=1.1e-30  Score=252.43  Aligned_cols=204  Identities=21%  Similarity=0.311  Sum_probs=152.6

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~  165 (363)
                      ...++|.+.++||+|+||.||+|...      .+..||||.+...........|.+|+.++.++. |||||++++++...
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            34578999999999999999999742      134699999976555555678999999999996 99999999998776


Q ss_pred             C-eEEEEEccCCCChhhhhhhccC--------------------------------------------------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKWL--------------------------------------------------------  188 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~--------------------------------------------------------  188 (363)
                      + .+||||||++|+|.++|.....                                                        
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            5 8999999999999887653110                                                        


Q ss_pred             -----------------------------------------------------------------------C------CC
Q 048684          189 -----------------------------------------------------------------------P------DK  191 (363)
Q Consensus       189 -----------------------------------------------------------------------~------~~  191 (363)
                                                                                             +      ..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~  273 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG  273 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence                                                                                   0      00


Q ss_pred             ceeEE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          192 WTHHI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       192 ~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                      ....+                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||.........+..+
T Consensus       274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~  353 (400)
T cd05105         274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI  353 (400)
T ss_pred             CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence            00000                 001125567999999999999999999999999999997 999997654433333333


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....+....    .....+.+++.+||+.||.+|||+.+|.+.|+.
T Consensus       354 ~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~  396 (400)
T cd05105         354 KSGYRMAKPD----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES  396 (400)
T ss_pred             hcCCCCCCCc----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence            3333222222    233458999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=5e-31  Score=248.53  Aligned_cols=202  Identities=19%  Similarity=0.294  Sum_probs=160.1

Q ss_pred             HHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-  166 (363)
                      .....+|..++.||.|+|++||+|+ ..+++.||||++.+...  +...+-+..|-.+|.+| .||.||+|+-.+.+.. 
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4455789999999999999999998 67899999999975432  23344566899999999 7999999998666554 


Q ss_pred             eEEEEEccCCCChhhhhhh------------------------------------------------------ccCCCC-
Q 048684          167 MHLILELSPHGSLASLLYA------------------------------------------------------KWLPDK-  191 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~------------------------------------------------------~~~~~~-  191 (363)
                      +|+|+||+++|+|.++|..                                                      +.++.. 
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            9999999999999988851                                                      001100 


Q ss_pred             ----------ceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC
Q 048684          192 ----------WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       192 ----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                                ........++||..|.+||++..+..++.+|+|+||||||+|+.|.+||.+.+....+.+++.-.+  .+
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y--~f  306 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY--EF  306 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--cC
Confidence                      011112458899999999999999999999999999999999999999999887777666554332  33


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +..+++    .+.+|+.+.|..||.+|+|..+|-++.-
T Consensus       307 p~~fp~----~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  307 PEGFPE----DARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             CCCCCH----HHHHHHHHHHccCccccccHHHHhhCcc
Confidence            344554    4899999999999999999999987644

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=1.2e-29  Score=236.33  Aligned_cols=203  Identities=22%  Similarity=0.333  Sum_probs=145.4

Q ss_pred             CCCccCCcccccCceEEEEEEEcC-----------------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED-----------------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM  158 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l  158 (363)
                      ++|...++||+|+||.||+|.+.+                 +..||||.+...........|.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            578888999999999999997432                 347999999765545556789999999999999999999


Q ss_pred             EEEEEcCC-eEEEEEccCCCChhhhhhhccCC------------------------------------------------
Q 048684          159 IGYGVEGG-MHLILELSPHGSLASLLYAKWLP------------------------------------------------  189 (363)
Q Consensus       159 ~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~------------------------------------------------  189 (363)
                      ++++.+.+ .++||||+++|+|.+++......                                                
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl  164 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL  164 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence            99887655 89999999999998766321100                                                


Q ss_pred             --------CCce-----------------eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh--CCCCCCC
Q 048684          190 --------DKWT-----------------HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT--GRQALDS  242 (363)
Q Consensus       190 --------~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt--G~~P~~~  242 (363)
                              ....                 ........++..|+|||++..+.++.++|||||||++|||++  |..||..
T Consensus       165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  244 (304)
T cd05096         165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE  244 (304)
T ss_pred             chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence                    0000                 000111234678999999998999999999999999999987  5678875


Q ss_pred             chhhHHHHHhhhhhcC---CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          243 SQKSLVMWSSMKELVD---PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       243 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .......... .....   .......+...+..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus       245 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         245 LTDEQVIENA-GEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCHHHHHHHH-HHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            4432222111 11000   00000011123345899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=7.2e-31  Score=231.12  Aligned_cols=187  Identities=19%  Similarity=0.298  Sum_probs=150.0

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||.|+||.|.+++ ..+|..+|+|++++...  -...+...+|..+|..+.||.+|++++.+.+.. +|+||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            578889999999999999998 56789999999976542  233567889999999999999999999777665 99999


Q ss_pred             EccCCCChhhhhhhc-cC------------------------------CCC------------------ceeEEEeeccc
Q 048684          172 ELSPHGSLASLLYAK-WL------------------------------PDK------------------WTHHIVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-~~------------------------------~~~------------------~~~~~~~~~~g  202 (363)
                      ||.+||.|..+|+.. .+                              |+.                  ........+||
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCG  203 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCG  203 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecC
Confidence            999999999998621 00                              000                  01112456899


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      ||.|+|||++....|+.++|+|||||++|||+.|.+||.+........+++.+.+  .++..++.    .+.+|+...|+
T Consensus       204 TPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v--~fP~~fs~----~~kdLl~~LL~  277 (355)
T KOG0616|consen  204 TPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV--KFPSYFSS----DAKDLLKKLLQ  277 (355)
T ss_pred             CccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc--cCCcccCH----HHHHHHHHHHh
Confidence            9999999999999999999999999999999999999998877555555555543  22333444    49999999999


Q ss_pred             cCCCCC
Q 048684          283 QTSACR  288 (363)
Q Consensus       283 ~dP~~R  288 (363)
                      .|-+.|
T Consensus       278 vD~t~R  283 (355)
T KOG0616|consen  278 VDLTKR  283 (355)
T ss_pred             hhhHhh
Confidence            999999

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.4e-30  Score=245.31  Aligned_cols=197  Identities=21%  Similarity=0.341  Sum_probs=160.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv~  171 (363)
                      ++|..++++|+|+||.++..++ .++..|++|.+.... .+...+...+|+.++++++|||||.+.+.+..++  .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5788999999999999999984 557889999997544 3344567889999999999999999999666555  78999


Q ss_pred             EccCCCChhhhhhhcc---------------------------------------CCCC--------------cee-EEE
Q 048684          172 ELSPHGSLASLLYAKW---------------------------------------LPDK--------------WTH-HIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---------------------------------------~~~~--------------~~~-~~~  197 (363)
                      +||+||+|.+.|....                                       +...              ... ...
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a  163 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA  163 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence            9999999998875110                                       0000              000 145


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      .+++||+.||.||++.+.+|+.|+|||||||++|||++-+++|.+.+.......+......|.     +...+..+..++
T Consensus       164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl-----p~~ys~el~~lv  238 (426)
T KOG0589|consen  164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL-----PSMYSSELRSLV  238 (426)
T ss_pred             heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC-----CccccHHHHHHH
Confidence            567899999999999999999999999999999999999999999888777777776665542     333444599999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..|+..+|..||++.+++.+
T Consensus       239 ~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  239 KSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHhhcCCccCCCHHHHhhC
Confidence            99999999999999999986

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.97  E-value=8.6e-30  Score=242.99  Aligned_cols=214  Identities=26%  Similarity=0.418  Sum_probs=160.1

Q ss_pred             hcCCCCcccCHHHHHHhcCCCccCCcccccCceEEEEEEEcC---C--cEEEEEEecCCCchhHHHHHHHHHHHHHhCCC
Q 048684           78 YLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLED---G--QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH  152 (363)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~---g--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H  152 (363)
                      +..|+.+.+.     ...+.....++||.|-||.||+|.+.+   |  -.||||..+.+...+..+.|++|..+|+.++|
T Consensus       376 y~~P~~rnye-----l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH  450 (974)
T KOG4257|consen  376 YSTPTVRNYE-----LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH  450 (974)
T ss_pred             ccCCCCCcce-----eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC
Confidence            4445544443     333455666889999999999998533   3  35999999886666668999999999999999


Q ss_pred             CCcceEEEEEEcCCeEEEEEccCCCChhhhhhhccCCC----------------------CceeE---------------
Q 048684          153 PNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPD----------------------KWTHH---------------  195 (363)
Q Consensus       153 ~niv~l~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~----------------------~~~~~---------------  195 (363)
                      ||||+|+|+|.+...|||||.++.|.|..||....-..                      .+.|+               
T Consensus       451 phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CV  530 (974)
T KOG4257|consen  451 PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCV  530 (974)
T ss_pred             cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCccee
Confidence            99999999999999999999999999999986211000                      00000               


Q ss_pred             -----------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          196 -----------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       196 -----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                       -.+...-...|||||.++...++.+||||-|||++||++. |..||.+-....+.. .+..+-
T Consensus       531 KLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-~iEnGe  609 (974)
T KOG4257|consen  531 KLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-HIENGE  609 (974)
T ss_pred             eecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-EecCCC
Confidence                             0111123456999999999999999999999999999886 999998765444332 222333


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ....++.+++.    |..|+.+||+.+|.+||.+.++...|...
T Consensus       610 RlP~P~nCPp~----LYslmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  610 RLPCPPNCPPA----LYSLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             CCCCCCCCChH----HHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence            33344445544    99999999999999999999999888755

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3.8e-30  Score=242.73  Aligned_cols=198  Identities=20%  Similarity=0.256  Sum_probs=149.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++..++|||||++++++.+.+ .++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5788899999999999999985 568999999986432  1223567889999999999999999999877666 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeEE------------Eeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI------------VSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~------------~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +.......+            ....+|
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g  177 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG  177 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence            9999999988764210                                     000000000            113468


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|+|||++.+..++.++|||||||++|||+||+.||.+..............  ..++...+    ..+.+++.+||+
T Consensus       178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~~~----~~~~~li~~~L~  251 (329)
T PTZ00263        178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--LKFPNWFD----GRARDLVKGLLQ  251 (329)
T ss_pred             ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--cCCCCCCC----HHHHHHHHHHhh
Confidence            999999999999999999999999999999999999998755433322222221  12222233    348899999999


Q ss_pred             cCCCCCCC-----HHHHHHHhh
Q 048684          283 QTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       283 ~dP~~RPt-----~~evl~~L~  299 (363)
                      .||.+||+     +.+++.+-.
T Consensus       252 ~dP~~R~~~~~~~~~~ll~hp~  273 (329)
T PTZ00263        252 TDHTKRLGTLKGGVADVKNHPY  273 (329)
T ss_pred             cCHHHcCCCCCCCHHHHhcCCc
Confidence            99999997     788887644

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.7e-30  Score=241.33  Aligned_cols=204  Identities=20%  Similarity=0.261  Sum_probs=151.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++.... .++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4688899999999999999995 468999999987432  1223567889999999999999999999887766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE------------EEeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH------------IVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~------------~~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +.......            .....+|
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g  160 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG  160 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence            9999999998874210                                     00000000            1123569


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh--hhhcC-CcCCCCCCHHHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM--KELVD-PTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~li~~  279 (363)
                      |+.|+|||++.+..++.++|||||||++|||++|..||.............  ..... +.... .....+..+.+++.+
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~s~~~~~li~~  239 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDD-PRFNLSDEAWDLITK  239 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCc-cccccCHHHHHHHHH
Confidence            999999999999999999999999999999999999998765433222111  11111 11110 011234558999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||..+|.+||++.+++++...
T Consensus       240 ~l~~~~~rr~s~~~ll~h~~~  260 (333)
T cd05600         240 LINDPSRRFGSLEDIKNHPFF  260 (333)
T ss_pred             HhhChhhhcCCHHHHHhCccc
Confidence            999999999999999987543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=9.1e-30  Score=233.83  Aligned_cols=199  Identities=22%  Similarity=0.376  Sum_probs=149.5

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|.+.+.||+|+||.||+|...      ++..||||.+......+....|.+|++++..++||||+++++++.... .+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            46788899999999999999853      247899999976655545678999999999999999999999887766 89


Q ss_pred             EEEEccCCCChhhhhhhccC----------------------------------CC-Ccee----------------E--
Q 048684          169 LILELSPHGSLASLLYAKWL----------------------------------PD-KWTH----------------H--  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~----------------------------------~~-~~~~----------------~--  195 (363)
                      +||||+++|+|.+++.....                                  .. ...+                .  
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~  164 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG  164 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence            99999999999887742100                                  00 0000                0  


Q ss_pred             ---------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCC
Q 048684          196 ---------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDP  259 (363)
Q Consensus       196 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~  259 (363)
                                     ......+++.|+|||++.+..++.++|||||||++|||++ |..||................ .+
T Consensus       165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~-~~  243 (280)
T cd05049         165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR-LL  243 (280)
T ss_pred             CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-cC
Confidence                           0011124567999999999999999999999999999999 999997654433332222221 12


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ......+    ..+.+++.+||+.||.+||++.+|++.|.
T Consensus       244 ~~~~~~~----~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         244 QRPRTCP----SEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             CCCCCCC----HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            2222233    44899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=1.2e-29  Score=233.60  Aligned_cols=200  Identities=24%  Similarity=0.403  Sum_probs=150.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcC-C-----cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED-G-----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~-g-----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|+..+.||+|+||.||+|.... +     ..||+|.+...........|.+|+.++..++||||+++++++.... .+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            468888999999999999998532 2     5799999976555555677999999999999999999999887655 88


Q ss_pred             EEEEccCCCChhhhhhhccC-----------------------------------------------------CCCceeE
Q 048684          169 LILELSPHGSLASLLYAKWL-----------------------------------------------------PDKWTHH  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~-----------------------------------------------------~~~~~~~  195 (363)
                      ++|||+++|+|.+++.....                                                     .......
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence            99999999999887742100                                                     0000000


Q ss_pred             E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          196 I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       196 ~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                      +                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+......... +....
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~~~~  243 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IRSRQ  243 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHcCC
Confidence            0                 011235678999999998999999999999999999998 9999987554333222 22211


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+..    +...+..+.+|+.+||+.||.+||++.+|+++|+.
T Consensus       244 ~~~~----~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         244 LLPC----PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             cCCC----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            1222    22334559999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.97  E-value=6.6e-30  Score=241.48  Aligned_cols=201  Identities=19%  Similarity=0.292  Sum_probs=148.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||.|+||.||++.. .+|..+|+|.+...........+.+|++++..++|||||++++++.+.+ .++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            36899999999999999999985 4688999999876544444577999999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------CCC--CceeE-----------------------------EEeecc
Q 048684          173 LSPHGSLASLLYAKW--------------------LPD--KWTHH-----------------------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------~~~--~~~~~-----------------------------~~~~~~  201 (363)
                      |+++|+|.+++....                    +..  ...|.                             ......
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  163 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence            999999998874110                    000  00000                             011235


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-----------------------------
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-----------------------------  252 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-----------------------------  252 (363)
                      ||+.|+|||++.+..++.++|||||||++|||++|+.||............                             
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (333)
T cd06650         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP  243 (333)
T ss_pred             CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence            889999999999889999999999999999999999999754322111100                             


Q ss_pred             --------------hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          253 --------------MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       253 --------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                    +.....+...   .......+.+|+.+||+.||.+|||+.+++.+-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~  300 (333)
T cd06650         244 DSRPPMAIFELLDYIVNEPPPKLP---SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA  300 (333)
T ss_pred             cccccccHHHHHHHHhcCCCccCC---CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence                          0000000000   001234588999999999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=253.32  Aligned_cols=200  Identities=26%  Similarity=0.414  Sum_probs=154.7

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ....+.++||.|.||.||+|+++ .|   ..||||.++....+..+..|+.|+.||.+++||||++|.|+..... .+||
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            34566789999999999999853 23   5799999998888888899999999999999999999999887665 7889


Q ss_pred             EEccCCCChhhhhhhcc---------------------CCC-Ccee------------------------EEE-------
Q 048684          171 LELSPHGSLASLLYAKW---------------------LPD-KWTH------------------------HIV-------  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---------------------~~~-~~~~------------------------~~~-------  197 (363)
                      .|||+||+|+.||....                     +.+ ...|                        +..       
T Consensus       709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~  788 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  788 (996)
T ss_pred             hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence            99999999999996211                     000 0000                        000       


Q ss_pred             -eecc--cccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          198 -SKIE--GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 -~~~~--gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                       +...  -...|.|||.+...++|.+||||||||||||.++ |.+||.+.....+...+- +.+.-..+.+++.    .|
T Consensus       789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe-~gyRLPpPmDCP~----aL  863 (996)
T KOG0196|consen  789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-QGYRLPPPMDCPA----AL  863 (996)
T ss_pred             ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH-hccCCCCCCCCcH----HH
Confidence             0000  1256999999999999999999999999999665 999999887776654433 3332222333444    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..|++.||++|...||.+.||+..|..
T Consensus       864 ~qLMldCWqkdR~~RP~F~qiV~~lDk  890 (996)
T KOG0196|consen  864 YQLMLDCWQKDRNRRPKFAQIVSTLDK  890 (996)
T ss_pred             HHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence            999999999999999999999998864

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=1.7e-29  Score=236.77  Aligned_cols=200  Identities=22%  Similarity=0.401  Sum_probs=149.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      .+|+..+.||+|+||+||+|.+ .+|.    .||||.+...........|.+|+.++..++||||++++|+|.....++|
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            4689999999999999999984 3444    3899999765544556789999999999999999999999988888999


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeEE----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~----------------  196 (363)
                      +||+++|+|.+++....                                      +.......+                
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  166 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEY  166 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcce
Confidence            99999999988775210                                      000000000                


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....++..|+|||++.+..++.++|||||||++|||+| |+.||.+...... ...+........+...+    ..+.
T Consensus       167 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~  241 (316)
T cd05108         167 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICT----IDVY  241 (316)
T ss_pred             eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCCCCCCC----HHHH
Confidence             001123567999999999999999999999999999998 9999986543322 22222221111122233    3488


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .++..||..+|..||++.+++..|..
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~l~~  267 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIEFSK  267 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHH
Confidence            99999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.6e-30  Score=239.54  Aligned_cols=198  Identities=16%  Similarity=0.182  Sum_probs=149.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++.+.. .++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4688899999999999999985 468999999986432  1223467889999999999999999999877665 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeEE------------Eeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI------------VSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~------------~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +.......+            ....+|
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g  160 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG  160 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence            9999999988774210                                     000000000            112468


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++...+    ..+.+++.+||+
T Consensus       161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~----~~~~~li~~~l~  234 (291)
T cd05612         161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK--LEFPRHLD----LYAKDLIKKLLV  234 (291)
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--cCCCccCC----HHHHHHHHHHcC
Confidence            999999999999999999999999999999999999998765443333332221  12222233    448999999999


Q ss_pred             cCCCCCCC-----HHHHHHHhh
Q 048684          283 QTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       283 ~dP~~RPt-----~~evl~~L~  299 (363)
                      .||.+||+     +.+++++-+
T Consensus       235 ~dp~~R~~~~~~~~~~~l~h~~  256 (291)
T cd05612         235 VDRTRRLGNMKNGADDVKNHRW  256 (291)
T ss_pred             CCHHHccCCccCCHHHHhcCcc
Confidence            99999995     889887644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=2.4e-29  Score=228.78  Aligned_cols=199  Identities=21%  Similarity=0.323  Sum_probs=149.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .++|+..++||+|+||.||+|...++..||+|.+.....  ..+.+.+|+.+++.++|+||+++++++...+ .+++|||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            357889999999999999999987788899999865432  2468999999999999999999999877655 7899999


Q ss_pred             cCCCChhhhhhhcc---------------------------------------CCCCceeE----------------EEe
Q 048684          174 SPHGSLASLLYAKW---------------------------------------LPDKWTHH----------------IVS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---------------------------------------~~~~~~~~----------------~~~  198 (363)
                      +++|+|.+++....                                       +.......                ...
T Consensus        83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  162 (261)
T cd05072          83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE  162 (261)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence            99999988874210                                       00000000                001


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...++..|+|||++....++.++|||||||++|+|+| |..||............ ............+    ..+.+++
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~li  237 (261)
T cd05072         163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-QRGYRMPRMENCP----DELYDIM  237 (261)
T ss_pred             CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCC----HHHHHHH
Confidence            1124567999999998899999999999999999999 99999765443332222 2222221222233    3489999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+||+.+|.+||++.++++.|+.
T Consensus       238 ~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         238 KTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=2e-29  Score=228.76  Aligned_cols=196  Identities=19%  Similarity=0.367  Sum_probs=146.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|...+.||+|+||.||++.+.++..+|+|.+......  ...|.+|+.++++++||||+++++++.... .++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS--EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc--HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            457888899999999999999877888999998654322  357899999999999999999999887665 88999999


Q ss_pred             CCCChhhhhhhcc--CCC------------------------------------CceeEE----------------Eeec
Q 048684          175 PHGSLASLLYAKW--LPD------------------------------------KWTHHI----------------VSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--~~~------------------------------------~~~~~~----------------~~~~  200 (363)
                      ++|+|.+++....  ++.                                    .....+                ....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~  161 (256)
T cd05114          82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGA  161 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCC
Confidence            9999998875211  000                                    000000                0011


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.+..++.++|||||||++|||++ |+.||................ .+..+...    ...+.+++.+
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~----~~~~~~li~~  236 (256)
T cd05114         162 KFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRPKLA----SMTVYEVMYS  236 (256)
T ss_pred             CCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCC----CHHHHHHHHH
Confidence            24557999999998899999999999999999999 999998765433322222211 11111222    3458999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||+.+|..||++.++++.|
T Consensus       237 c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         237 CWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HccCCcccCcCHHHHHHhh
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.96  E-value=7.5e-30  Score=235.72  Aligned_cols=199  Identities=21%  Similarity=0.280  Sum_probs=144.7

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|...+.||+|+||+||+|. ..+|+.||||.+.....  ......+.+|+.++..++|+||+++++++.+.+ .++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            36778899999999999998 46799999999864331  122356889999999999999999999877655 889999


Q ss_pred             ccCCCChhhhhhhcc---------------------------------------CCCCcee--------------EEEee
Q 048684          173 LSPHGSLASLLYAKW---------------------------------------LPDKWTH--------------HIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------------------------~~~~~~~--------------~~~~~  199 (363)
                      ||++|+|.+++....                                       +......              .....
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG  160 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence            999999976653100                                       0000000              01123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||....................  ..++...+..+.+|+.+
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~  238 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--EEYSEKFSEDAKSICRM  238 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--ccCCccCCHHHHHHHHH
Confidence            4689999999999999999999999999999999999999986543221111111111111  11223334458999999


Q ss_pred             ccccCCCCCCC-----HHHHHHH
Q 048684          280 CINQTSACRPQ-----MSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt-----~~evl~~  297 (363)
                      ||+.||.+||+     +.+++++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         239 LLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HhhcCHHHhcCCCCCCHHHHhcC
Confidence            99999999997     7888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=240.56  Aligned_cols=201  Identities=17%  Similarity=0.271  Sum_probs=155.6

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-  166 (363)
                      ..+.|...+.||+|+||+|+.|. ..+|..||||.+.+..    .....+.+.+|+.+++.++ ||||++++.+..... 
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            35789999999999999999997 5678999999776531    1123456668999999999 999999999887655 


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------------cCCCC----------------ce
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------------WLPDK----------------WT  193 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~----------------~~  193 (363)
                      +++|||||.+|+|.+++...                                     .+...                ..
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~  174 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE  174 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence            89999999999999988520                                     00111                01


Q ss_pred             eEEEeecccccCCCCchhhccCC-CC-ccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          194 HHIVSKIEGTFGYLPPEFFMHGI-AD-EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       194 ~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                      .......|||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+..........+....+  .++....   +.
T Consensus       175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~--~~p~~~~---S~  249 (370)
T KOG0583|consen  175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF--KIPSYLL---SP  249 (370)
T ss_pred             CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc--cCCCCcC---CH
Confidence            22345678999999999999877 75 899999999999999999999998665555554333322  2222231   45


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+..|+.+|+..||..|+|+.+++.+-+
T Consensus       250 ~~~~Li~~mL~~~P~~R~t~~~i~~h~w  277 (370)
T KOG0583|consen  250 EARSLIEKMLVPDPSTRITLLEILEHPW  277 (370)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence            5999999999999999999999996433

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=4.4e-30  Score=244.58  Aligned_cols=199  Identities=21%  Similarity=0.302  Sum_probs=143.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.+++.++|+|||++++++...+ +++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            4567778999999999999985 5689999999976555555678999999999999999999999887665 8899999


Q ss_pred             cCCCChhhhhh---------------------hc------------cCCCCc---------ee------EEEeecccccC
Q 048684          174 SPHGSLASLLY---------------------AK------------WLPDKW---------TH------HIVSKIEGTFG  205 (363)
Q Consensus       174 ~~~gsL~~~l~---------------------~~------------~~~~~~---------~~------~~~~~~~gt~~  205 (363)
                      |.+|+|.+...                     ..            .+....         ..      .......||+.
T Consensus       154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  233 (353)
T PLN00034        154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIA  233 (353)
T ss_pred             CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCcc
Confidence            99999865421                     00            000000         00      01123468999


Q ss_pred             CCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhH--HHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          206 YLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSL--VMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       206 y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      |+|||++..     ...+.++|||||||++|||++|+.||.......  .....+.....+......    ...+.+|+.
T Consensus       234 y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~  309 (353)
T PLN00034        234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA----SREFRHFIS  309 (353)
T ss_pred             ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCcc----CHHHHHHHH
Confidence            999999843     234579999999999999999999997432111  111111111112222223    345999999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      .||+.||.+|||+.+++++-
T Consensus       310 ~~l~~~P~~Rpt~~ell~hp  329 (353)
T PLN00034        310 CCLQREPAKRWSAMQLLQHP  329 (353)
T ss_pred             HHccCChhhCcCHHHHhcCc
Confidence            99999999999999999864

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=4.8e-29  Score=227.58  Aligned_cols=200  Identities=24%  Similarity=0.351  Sum_probs=148.9

Q ss_pred             CCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||+||+|.+..    ...||||.+...........|.+|+.++..++||||+++++++...+ .++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            578889999999999999998632    35799999876655555678999999999999999999999877655 8899


Q ss_pred             EEccCCCChhhhhhhcc--C------------------------------------CCCceeE-----------------
Q 048684          171 LELSPHGSLASLLYAKW--L------------------------------------PDKWTHH-----------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~------------------------------------~~~~~~~-----------------  195 (363)
                      |||+++|+|.+++....  +                                    .......                 
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY  163 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence            99999999998874210  0                                    0000000                 


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..................+ .....    +..+.
T Consensus       164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~l~  238 (266)
T cd05033         164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP-PPMDC----PSALY  238 (266)
T ss_pred             eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC-CCCCC----CHHHH
Confidence            0001124567999999998999999999999999999998 999997654333222222211111 12223    34589


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +++..||+.+|.+||++.+|+++|..
T Consensus       239 ~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         239 QLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            99999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.96  E-value=1.4e-29  Score=238.20  Aligned_cols=191  Identities=16%  Similarity=0.246  Sum_probs=144.1

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      ++||+|+||.||++.. .+|+.||||.+....  .......+.+|+.++.+++||||+++++++...+ .++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999984 578999999987432  2233567889999999999999999999877666 89999999999


Q ss_pred             Chhhhhhhcc-------------------------------------CCCCcee---------------EEEeecccccC
Q 048684          178 SLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTFG  205 (363)
Q Consensus       178 sL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~~  205 (363)
                      +|.+++....                                     +......               ......+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            9987764110                                     0000000               01123469999


Q ss_pred             CCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC
Q 048684          206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTS  285 (363)
Q Consensus       206 y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  285 (363)
                      |+|||++.+..++.++|||||||++|||+||+.||...+...........  +..++...    ...+.+++.+||+.||
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~p~~~----~~~~~~li~~~L~~dP  234 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTL----SPEAKSLLAGLLKKDP  234 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCC----CHHHHHHHHHHccCCH
Confidence            99999999999999999999999999999999999876543332222222  12222333    3458999999999999


Q ss_pred             CCCC-----CHHHHHHHh
Q 048684          286 ACRP-----QMSKVVQAL  298 (363)
Q Consensus       286 ~~RP-----t~~evl~~L  298 (363)
                      .+||     ++.+++++-
T Consensus       235 ~~R~~~~~~~~~~ll~h~  252 (323)
T cd05571         235 KQRLGGGPEDAKEIMEHR  252 (323)
T ss_pred             HHcCCCCCCCHHHHHcCC
Confidence            9999     899998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=8.8e-30  Score=244.87  Aligned_cols=198  Identities=19%  Similarity=0.305  Sum_probs=158.9

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCC--CchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +-|..++.||.|+.|.|-+|+ ..+|+.+|||++.+.  ..+.....+.+||-||+-+.||||+++|+.+.+.. +|+|+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            568888999999999999998 578999999999765  23344567889999999999999999999777655 99999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce--------------eEEEeec
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT--------------HHIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~--------------~~~~~~~  200 (363)
                      ||+++|.|+++|..+.                                     +.....              ...+..-
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS  171 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS  171 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence            9999999999985210                                     000001              1123445


Q ss_pred             ccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ||+|+|.+||++.+.+| +.++||||.|||||.||||+.||++++......+...+.++  ++...+.+    +.+|+.+
T Consensus       172 CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~--MPs~Is~e----aQdLLr~  245 (786)
T KOG0588|consen  172 CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE--MPSNISSE----AQDLLRR  245 (786)
T ss_pred             CCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc--CCCcCCHH----HHHHHHH
Confidence            89999999999999988 58999999999999999999999987776666665555443  23334444    9999999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      |+..||..|.|+.+|+++..
T Consensus       246 ml~VDp~~RiT~~eI~kHP~  265 (786)
T KOG0588|consen  246 MLDVDPSTRITTEEILKHPF  265 (786)
T ss_pred             HhccCccccccHHHHhhCch
Confidence            99999999999999998643

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.4e-30  Score=220.75  Aligned_cols=197  Identities=25%  Similarity=0.390  Sum_probs=155.8

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+.++.||+|-||.||.|+ ..++..||+|++-+...  .+...++.+|++|-+.|+||||+++|+|+.+.. .||++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            679999999999999999998 56788999999865431  233467889999999999999999999988876 89999


Q ss_pred             EccCCCChhhhhhhcc------------------------------------------------CCCCceeE----EEee
Q 048684          172 ELSPHGSLASLLYAKW------------------------------------------------LPDKWTHH----IVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~------------------------------------------------~~~~~~~~----~~~~  199 (363)
                      ||.++|+|...|....                                                ....|..+    .-..
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~t  181 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKT  181 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCcee
Confidence            9999999998886110                                                00011111    1235


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      +|||+.|++||+..+..++..+|+|++||+.||++.|.+||..........+ +.. ++-.++...+.    ...++|..
T Consensus       182 lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr-I~k-~~~~~p~~is~----~a~dlI~~  255 (281)
T KOG0580|consen  182 LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR-IRK-VDLKFPSTISG----GAADLISR  255 (281)
T ss_pred             eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH-HHH-ccccCCcccCh----hHHHHHHH
Confidence            7899999999999999999999999999999999999999998774444333 222 12222233344    48999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      |+..+|.+|.+..|++++-
T Consensus       256 ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  256 LLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             HhccCccccccHHHHhhhH
Confidence            9999999999999999764

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=5.2e-29  Score=239.64  Aligned_cols=201  Identities=15%  Similarity=0.218  Sum_probs=146.5

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|+..+.||+|+||+||+|. ..+++.||||.+....  .......+.+|+.++..++|||||++++++.+.. .++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            58888999999999999998 4668999999996532  2234567899999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhhcc-------------------------------------CCCCceeE--------------------
Q 048684          173 LSPHGSLASLLYAKW-------------------------------------LPDKWTHH--------------------  195 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~--------------------  195 (363)
                      ||++|+|.+++....                                     +.......                    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            999999988763100                                     00000000                    


Q ss_pred             ------------------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHH
Q 048684          196 ------------------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEI  233 (363)
Q Consensus       196 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el  233 (363)
                                                                .....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence                                                      01235799999999999998999999999999999999


Q ss_pred             HhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH--ccccCCCCCCCHHHHHHHhh
Q 048684          234 ITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA--CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       234 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.....................+.  .......+.+++.+  |+..+|..||++.+++.+-.
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~  307 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVINWENTLHIPP--QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF  307 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHHccccccCCCC--CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence            999999987654333333222111111111  11123347777776  66777778999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.96  E-value=3.7e-29  Score=233.09  Aligned_cols=201  Identities=23%  Similarity=0.367  Sum_probs=149.6

Q ss_pred             CCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-e
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~  167 (363)
                      ++|...+.||+|+||.||++..      .++..||||.+...........+.+|+.+++++ +||||+++++++...+ .
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            5799999999999999999973      124579999987654444467899999999999 7999999999887665 8


Q ss_pred             EEEEEccCCCChhhhhhhcc---CCC--------------------Ccee------------------------------
Q 048684          168 HLILELSPHGSLASLLYAKW---LPD--------------------KWTH------------------------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~---~~~--------------------~~~~------------------------------  194 (363)
                      ++||||+++|+|.+++....   ++.                    ...|                              
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMND  194 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence            99999999999988774211   000                    0000                              


Q ss_pred             ---EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                         .......+++.|+|||++.+..++.++|||||||++|||+| |..||..................+..+...    .
T Consensus       195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~  270 (302)
T cd05055         195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHA----P  270 (302)
T ss_pred             CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCC----C
Confidence               00011224567999999999999999999999999999998 999997655433333333222222222222    3


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.+++.+||+.+|.+|||+.++++.|..
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            459999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.6e-30  Score=233.19  Aligned_cols=198  Identities=24%  Similarity=0.366  Sum_probs=149.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||.|+||.||+|.. .+|..||+|.+...........+.+|+.+++.++||||+++++++.++. .++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3688889999999999999985 5689999999876544444567899999999999999999999877665 8899999


Q ss_pred             cCCCChhhhhhhccCCC------------------------------------CceeE---------------EEeeccc
Q 048684          174 SPHGSLASLLYAKWLPD------------------------------------KWTHH---------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~~------------------------------------~~~~~---------------~~~~~~g  202 (363)
                      +++|+|.+++....++.                                    .....               ......|
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVG  160 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccC
Confidence            99999988875221000                                    00000               0112357


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      ++.|+|||++.+..++.++|||||||++|+|+||..||........... +.....+.+...   .....+.+++..||.
T Consensus       161 ~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~l~~~l~  236 (274)
T cd06609         161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFL-IPKNNPPSLEGN---KFSKPFKDFVSLCLN  236 (274)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHH-hhhcCCCCCccc---ccCHHHHHHHHHHhh
Confidence            8889999999988899999999999999999999999976543322222 222222333222   033348899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 048684          283 QTSACRPQMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RPt~~evl~~  297 (363)
                      .+|.+|||+.+++++
T Consensus       237 ~~p~~Rpt~~~il~~  251 (274)
T cd06609         237 KDPKERPSAKELLKH  251 (274)
T ss_pred             CChhhCcCHHHHhhC
Confidence            999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.8e-29  Score=235.05  Aligned_cols=189  Identities=19%  Similarity=0.231  Sum_probs=141.2

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||+|+||+||+|.. .+++.||+|.+....  .......+.+|+.++.+++|||||++++++...+ .++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999985 568899999986432  2233567889999999999999999999877665 8999999999999


Q ss_pred             hhhhhhcc-------------------------------------CCCCcee---------------EEEeecccccCCC
Q 048684          180 ASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTFGYL  207 (363)
Q Consensus       180 ~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~~y~  207 (363)
                      .+++....                                     +......               ......+||+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence            88774110                                     0000000               0112346999999


Q ss_pred             CchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC
Q 048684          208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSAC  287 (363)
Q Consensus       208 aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  287 (363)
                      |||++.+..++.++|||||||++|||+||+.||.+.............  ...++...    ...+.+++.+||+.||.+
T Consensus       161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~li~~~L~~dp~~  234 (312)
T cd05585         161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE--PLRFPDGF----DRDAKDLLIGLLSRDPTR  234 (312)
T ss_pred             CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--CCCCCCcC----CHHHHHHHHHHcCCCHHH
Confidence            999999999999999999999999999999999876544333222222  11222233    345899999999999999


Q ss_pred             CCC---HHHHHHHh
Q 048684          288 RPQ---MSKVVQAL  298 (363)
Q Consensus       288 RPt---~~evl~~L  298 (363)
                      ||+   +.+++.+-
T Consensus       235 R~~~~~~~e~l~hp  248 (312)
T cd05585         235 RLGYNGAQEIKNHP  248 (312)
T ss_pred             cCCCCCHHHHHcCC
Confidence            975   67777653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=1.8e-29  Score=232.78  Aligned_cols=205  Identities=20%  Similarity=0.267  Sum_probs=150.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||+|+||+||++.. .+|+.||+|.+...........+.+|++++..++||||+++++++.... .++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4677888999999999999984 5689999999876544445678999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------CC------------------CCcee-------------EEEeeccc
Q 048684          174 SPHGSLASLLYAKW--------------------LP------------------DKWTH-------------HIVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------~~------------------~~~~~-------------~~~~~~~g  202 (363)
                      +++|+|.+++....                    +.                  .....             ......+|
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~  164 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG  164 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc
Confidence            99999987653110                    00                  00000             00112358


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh-------HHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS-------LVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      +..|+|||++.+..++.++|||||||++|+|+||+.||......       ..........................+.+
T Consensus       165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd06620         165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRD  244 (284)
T ss_pred             CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHH
Confidence            89999999998889999999999999999999999999854331       00001111111111111111224455899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhc
Q 048684          276 IASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ++.+||+.||.+|||+.+++++...
T Consensus       245 li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         245 FVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             HHHHHhcCCcccCcCHHHHhcCccc
Confidence            9999999999999999999987544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=5.1e-29  Score=226.63  Aligned_cols=199  Identities=22%  Similarity=0.355  Sum_probs=151.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEcc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELS  174 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~  174 (363)
                      .++|+..++||+|+||.||+|...+++.||+|.+......  ...|.+|+.++++++||||+++++++.....+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcC
Confidence            4678889999999999999999888899999998755432  46789999999999999999999988777799999999


Q ss_pred             CCCChhhhhhhcc---------------------------------------CCCCceeEE----------------Eee
Q 048684          175 PHGSLASLLYAKW---------------------------------------LPDKWTHHI----------------VSK  199 (363)
Q Consensus       175 ~~gsL~~~l~~~~---------------------------------------~~~~~~~~~----------------~~~  199 (363)
                      ++|+|.+++....                                       +.......+                ...
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (260)
T cd05067          83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG  162 (260)
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence            9999988764210                                       000000000                001


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..++..|+|||++....++.++|||||||++|||++ |+.||.+........ .+............+    ..+.+++.
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~li~  237 (260)
T cd05067         163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ-NLERGYRMPRPDNCP----EELYELMR  237 (260)
T ss_pred             CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH-HHHcCCCCCCCCCCC----HHHHHHHH
Confidence            234567999999998999999999999999999999 999997654433222 222222222222233    44999999


Q ss_pred             HccccCCCCCCCHHHHHHHhhc
Q 048684          279 ACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +||+.+|.+|||+.+++..|+.
T Consensus       238 ~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         238 LCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHccCChhhCCCHHHHHHHhhc
Confidence            9999999999999999998853

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=8.8e-29  Score=224.79  Aligned_cols=193  Identities=22%  Similarity=0.320  Sum_probs=144.6

Q ss_pred             cccccCceEEEEEEE---cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCCC
Q 048684          103 LIGQGGYAEVYKGQL---EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGS  178 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~---~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~gs  178 (363)
                      +||+|+||.||+|.+   .++..||+|.+.... .......|..|+.+++.++||||+++++++.....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999964   357889999986443 2334578999999999999999999999988777899999999999


Q ss_pred             hhhhhhhcc-------------------------------------CCCCceeEE------------------Eeecccc
Q 048684          179 LASLLYAKW-------------------------------------LPDKWTHHI------------------VSKIEGT  203 (363)
Q Consensus       179 L~~~l~~~~-------------------------------------~~~~~~~~~------------------~~~~~gt  203 (363)
                      |.+++....                                     +.......+                  .....++
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  161 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWP  161 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCC
Confidence            988774110                                     000000000                  0111234


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      +.|+|||.+....++.++|||||||++|||+| |..||........... +.....+..+...+.    .+.+++.+||+
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~----~l~~li~~~~~  236 (257)
T cd05116         162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-IESGERMECPQRCPP----EMYDLMKLCWT  236 (257)
T ss_pred             ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCH----HHHHHHHHHhc
Confidence            78999999988889999999999999999998 9999987654433322 222222333333444    48999999999


Q ss_pred             cCCCCCCCHHHHHHHhhc
Q 048684          283 QTSACRPQMSKVVQALRG  300 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L~~  300 (363)
                      .||.+||++.+|...|+.
T Consensus       237 ~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         237 YGVDERPGFAVVELRLRN  254 (257)
T ss_pred             cCchhCcCHHHHHHHHhc
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=3.2e-29  Score=230.25  Aligned_cols=201  Identities=22%  Similarity=0.367  Sum_probs=148.2

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .+++|+..+.||+|+||.||+|...      ++..||||.+...........|.+|+.++..++||||+++++++..+. 
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567999999999999999999742      256799999865443344567999999999999999999999887655 


Q ss_pred             eEEEEEccCCCChhhhhhhccC-----------------------------------------------CCCceeEE---
Q 048684          167 MHLILELSPHGSLASLLYAKWL-----------------------------------------------PDKWTHHI---  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------~~~~~~~~---  196 (363)
                      .++||||+++|+|.+++.....                                               .......+   
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence            7899999999999887642110                                               00000000   


Q ss_pred             --------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcC
Q 048684          197 --------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       197 --------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                                    .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+............... +..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~~~  242 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL-LDK  242 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCC
Confidence                          001124667999999998899999999999999999999 7889976544332222222111 122


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...    ....+.+++.+||+.||.+|||+.++++.|+
T Consensus       243 ~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         243 PDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            222    3345899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.6e-30  Score=247.12  Aligned_cols=193  Identities=19%  Similarity=0.305  Sum_probs=154.1

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-e
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~  167 (363)
                      ..-++|...++||+|+||+|+++.. .+++.+|||.++++.  ..+.++..+.|..|+.-.. ||.++.+++.+.... +
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            3447899999999999999999984 568899999998775  3345788999999988775 999999999776655 9


Q ss_pred             EEEEEccCCCChhhhhhhccCCC---------------------------------------------------CceeEE
Q 048684          168 HLILELSPHGSLASLLYAKWLPD---------------------------------------------------KWTHHI  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~~---------------------------------------------------~~~~~~  196 (363)
                      |+||||+.||++..+.+...+++                                                   -+....
T Consensus       445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~  524 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR  524 (694)
T ss_pred             EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence            99999999999765543111000                                                   011123


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      .+++||||.|||||++.+..|+.++|+|||||+|||||+|..||.+++...+...++..  ++.    |+...+.+...|
T Consensus       525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--~~~----yP~~ls~ea~~i  598 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--EVR----YPRFLSKEAIAI  598 (694)
T ss_pred             cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CCC----CCCcccHHHHHH
Confidence            56789999999999999999999999999999999999999999998877666555443  222    444455569999


Q ss_pred             HHHccccCCCCCCCH
Q 048684          277 ASACINQTSACRPQM  291 (363)
Q Consensus       277 i~~cl~~dP~~RPt~  291 (363)
                      +.++|..+|++|..+
T Consensus       599 l~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  599 MRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHhccCcccccCC
Confidence            999999999999876

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=7.5e-29  Score=228.44  Aligned_cols=199  Identities=22%  Similarity=0.387  Sum_probs=147.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ++|+..+.||+|+||+||+|..     .++..||+|.+...........|.+|+.+++.++||||+++++++.... .++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4678889999999999999973     2467899999975554444578899999999999999999999877655 899


Q ss_pred             EEEccCCCChhhhhhhccC------------------------------------------------------CCCceeE
Q 048684          170 ILELSPHGSLASLLYAKWL------------------------------------------------------PDKWTHH  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~------------------------------------------------------~~~~~~~  195 (363)
                      ||||+++|+|.+++.....                                                      .......
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence            9999999999887731100                                                      0000000


Q ss_pred             E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          196 I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       196 ~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                      +                 .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.......... ....
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~  243 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV-RKRQ  243 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HcCC
Confidence            0                 011224567999999998899999999999999999999 99999765433222221 1111


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+..+...+    ..+.+++.+||+.||.+||++.+|+++|.
T Consensus       244 ~~~~~~~~~----~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         244 LLPCSEDCP----PRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             cCCCCCCCC----HHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence            122223333    44899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=2e-29  Score=238.90  Aligned_cols=198  Identities=17%  Similarity=0.267  Sum_probs=149.0

Q ss_pred             CCCccCCcccccCceEEEEEEEc-C-CcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-D-GQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~-g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|... + +..||+|.+....  .......+.+|+.++..++|||||++++++.+.. .++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            57888999999999999999843 3 3689999986432  2233567889999999999999999999887766 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCceeE------------EEeecc
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWTHH------------IVSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~------------~~~~~~  201 (363)
                      |||+++|+|.+++....                                     +.......            .....+
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~  189 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC  189 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence            99999999988874210                                     00000000            112346


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|+|||++.+..++.++|||||||++|||++|..||.................  .++...+    ..+.+++.+||
T Consensus       190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~----~~~~~li~~~l  263 (340)
T PTZ00426        190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--YFPKFLD----NNCKHLMKKLL  263 (340)
T ss_pred             CChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--CCCCCCC----HHHHHHHHHHc
Confidence            99999999999998999999999999999999999999987654433333222221  1222233    34889999999


Q ss_pred             ccCCCCCC-----CHHHHHHHhh
Q 048684          282 NQTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       282 ~~dP~~RP-----t~~evl~~L~  299 (363)
                      +.||.+|+     ++.+++++-.
T Consensus       264 ~~dp~~R~~~~~~~~~~~~~hp~  286 (340)
T PTZ00426        264 SHDLTKRYGNLKKGAQNVKEHPW  286 (340)
T ss_pred             ccCHHHcCCCCCCCHHHHHcCCC
Confidence            99999995     8999988644

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.8e-29  Score=249.59  Aligned_cols=194  Identities=20%  Similarity=0.278  Sum_probs=146.7

Q ss_pred             CCccCCcccccCceEEEEEEE-cC-CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-ED-GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~-g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .|...+.||+|+||.||+|.. .+ +..||+|.+.... ......+.+|+.+++.++|||||++++++...+ .+|||||
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            488889999999999999974 34 6788999775443 233456788999999999999999999887666 8999999


Q ss_pred             cCCCChhhhhhhcc-----------------------------------------CCCCce-----------------eE
Q 048684          174 SPHGSLASLLYAKW-----------------------------------------LPDKWT-----------------HH  195 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-----------------------------------------~~~~~~-----------------~~  195 (363)
                      +++|+|.++|....                                         +.....                 ..
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~  226 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLD  226 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccc
Confidence            99999987653100                                         000000                 00


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....+||+.|+|||++.+..++.++|||||||++|||+||+.||.................++ .+...+    ..+.+
T Consensus       227 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~s----~~~~~  301 (478)
T PTZ00267        227 VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP-FPCPVS----SGMKA  301 (478)
T ss_pred             cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCccCC----HHHHH
Confidence            1223469999999999999999999999999999999999999998765544443333333222 222233    45899


Q ss_pred             HHHHccccCCCCCCCHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~  296 (363)
                      ++..||+.||..||++.+++.
T Consensus       302 li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        302 LLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHhccChhhCcCHHHHHh
Confidence            999999999999999999985

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=1.4e-29  Score=233.74  Aligned_cols=201  Identities=18%  Similarity=0.267  Sum_probs=144.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|++.+.||+|+||+||+|.. .+++.||||.+.... .......+.+|+.+++.++||||+++++++...+ .++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4688999999999999999996 468899999987543 2233567889999999999999999999776655 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCCCceeE----------------EEee
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPDKWTHH----------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~~~~~~----------------~~~~  199 (363)
                      |++++.+..+....                                     .+.......                ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            99988665442100                                     000000000                0113


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-------------CC-------
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-------------DP-------  259 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-------------~~-------  259 (363)
                      ..||+.|+|||++.+..++.++|||||||++|||++|++||............ ....             ++       
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI-QKVLGPLPAEQMKLFYSNPRFHGLRF  239 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHhhCCCCHHHHHhhhccchhccccc
Confidence            46899999999999889999999999999999999999999865432211110 0000             00       


Q ss_pred             -cCCC------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -TLGD------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       ....      .+....+..+.+++.+||+.||.+|||+.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence             0000      0011134569999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=4.5e-29  Score=229.48  Aligned_cols=202  Identities=20%  Similarity=0.274  Sum_probs=151.5

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC-----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--Ce
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED-----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~  167 (363)
                      .++|...++||+|+||.||+|....     +..||+|.+...........+.+|+.++.+++||||+++++++...  ..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4678889999999999999998654     6889999987655555567899999999999999999999988763  37


Q ss_pred             EEEEEccCCCChhhhhhhccCC---------C------------------------------------CceeEE------
Q 048684          168 HLILELSPHGSLASLLYAKWLP---------D------------------------------------KWTHHI------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~---------~------------------------------------~~~~~~------  196 (363)
                      ++++||+++|+|.+++......         .                                    .....+      
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~  164 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS  164 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence            8999999999998887421100         0                                    000000      


Q ss_pred             -----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          197 -----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       197 -----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                                 .....++..|+|||++.+..++.++|||||||++||+++ |+.||....... ....+...........
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~  243 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-MAAYLKDGYRLAQPIN  243 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-HHHHHHcCCCCCCCCc
Confidence                       011224567999999998899999999999999999999 999997654322 2222222222222222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+    ..+.+++.+||..||.+|||+.++++.|...
T Consensus       244 ~~----~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         244 CP----DELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             CC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            33    4589999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=2.7e-29  Score=249.03  Aligned_cols=202  Identities=21%  Similarity=0.299  Sum_probs=152.5

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---  165 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---  165 (363)
                      .....++|.+.+.||+|+||+||+|. ..+|+.||||.+.... .......+.+|+.++..++|+||+++++.+...   
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            34456799999999999999999998 5679999999986543 344456788999999999999999998755321   


Q ss_pred             ------CeEEEEEccCCCChhhhhhhcc-----------------------------------------CCCCce-----
Q 048684          166 ------GMHLILELSPHGSLASLLYAKW-----------------------------------------LPDKWT-----  193 (363)
Q Consensus       166 ------~~~lv~E~~~~gsL~~~l~~~~-----------------------------------------~~~~~~-----  193 (363)
                            ..++||||+++|+|.++|....                                         +.....     
T Consensus       107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D  186 (496)
T PTZ00283        107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD  186 (496)
T ss_pred             CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence                  1579999999999988764210                                         000000     


Q ss_pred             ------------eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC
Q 048684          194 ------------HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       194 ------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                                  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+...............++ +
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~-~  265 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP-L  265 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC-C
Confidence                        001123468999999999999999999999999999999999999998765544433333333222 2


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +...+    ..+.+++..||+.||.+||++.+++++
T Consensus       266 ~~~~~----~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        266 PPSIS----PEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCC----HHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            23333    449999999999999999999999874

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=4.9e-29  Score=229.46  Aligned_cols=200  Identities=19%  Similarity=0.322  Sum_probs=146.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||.|+||+||+|.+ .+|.    .||+|.+...........+..|+.++.+++|||||++++++.....+++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            4678889999999999999985 4454    4788887654433445678889999999999999999999877778899


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeE-----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHH-----------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~-----------------  195 (363)
                      +||+++|+|.+++....                                      +.......                 
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY  166 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence            99999999998874210                                      00000000                 


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......|+..|+|||++.++.++.++|||||||++|||+| |..||.+....... ..+.....+..+...+    ..+.
T Consensus       167 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~  241 (279)
T cd05111         167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP-DLLEKGERLAQPQICT----IDVY  241 (279)
T ss_pred             ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCcCCCCCCCC----HHHH
Confidence            0112236678999999998999999999999999999998 99999876433221 1122211222222233    3478


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .++..||..||..|||+.++++.|..
T Consensus       242 ~li~~c~~~~p~~Rps~~el~~~l~~  267 (279)
T cd05111         242 MVMVKCWMIDENVRPTFKELANEFTR  267 (279)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            89999999999999999999988754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.96  E-value=2.2e-29  Score=229.64  Aligned_cols=202  Identities=24%  Similarity=0.390  Sum_probs=149.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||.||+|.. .+|+.||||.+....  .......|.+|+.+++.++||||+++++++...+ .++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5788999999999999999984 578999999876422  2334567899999999999999999999777655 88999


Q ss_pred             EccCCCChhhhhhhc-----cCC------------------------------------CCceeEE--------------
Q 048684          172 ELSPHGSLASLLYAK-----WLP------------------------------------DKWTHHI--------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-----~~~------------------------------------~~~~~~~--------------  196 (363)
                      ||+++|+|.+++...     .++                                    ......+              
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            999999998766310     000                                    0000000              


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....|++.|+|||++.+..++.++|||||||++|||++|+.||.......... ..+.....+..   ........+.
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  238 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL---PTEHYSEKLR  238 (267)
T ss_pred             HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC---ChhhcCHHHH
Confidence             012357889999999998889999999999999999999999997553322211 22222122211   1223445699


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +++.+||+.+|.+||++.+|++.|+.
T Consensus       239 ~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         239 ELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             HHHHHHCCCCcccCcCHHHHHHHHHH
Confidence            99999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=2.6e-29  Score=237.82  Aligned_cols=202  Identities=23%  Similarity=0.398  Sum_probs=148.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-  166 (363)
                      .++|++.+.||.|+||.||+|..      .+++.||+|.+...........+..|+.++.++ +||||++++++|.... 
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            45789999999999999999963      235789999987554444456788999999999 7999999999876543 


Q ss_pred             -eEEEEEccCCCChhhhhhhccC---------------------------------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL---------------------------------------------------------  188 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  188 (363)
                       .+++|||+++|+|.+++.....                                                         
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence             7899999999999887642100                                                         


Q ss_pred             -----CC--------------------Ccee----------------EE-----------------EeecccccCCCCch
Q 048684          189 -----PD--------------------KWTH----------------HI-----------------VSKIEGTFGYLPPE  210 (363)
Q Consensus       189 -----~~--------------------~~~~----------------~~-----------------~~~~~gt~~y~aPE  210 (363)
                           +.                    ...|                .+                 .....++..|+|||
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence                 00                    0000                00                 00112456799999


Q ss_pred             hhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 048684          211 FFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRP  289 (363)
Q Consensus       211 ~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  289 (363)
                      ++.+..++.++|||||||++|||++ |..||.+..........+.....+..+..    ....+.+++.+||+.+|.+||
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~cl~~~p~~RP  321 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEY----ATPEIYSIMLDCWHNNPEDRP  321 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCcc----CCHHHHHHHHHHccCChhhCc
Confidence            9999999999999999999999998 99999764433333333333222222222    334589999999999999999


Q ss_pred             CHHHHHHHhhc
Q 048684          290 QMSKVVQALRG  300 (363)
Q Consensus       290 t~~evl~~L~~  300 (363)
                      ++.+|+++|..
T Consensus       322 s~~ell~~l~~  332 (337)
T cd05054         322 TFSELVEILGD  332 (337)
T ss_pred             CHHHHHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=7.5e-30  Score=244.54  Aligned_cols=204  Identities=19%  Similarity=0.240  Sum_probs=149.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ..++|+..+.||+|+||.||++.. .+|..||||.+....  .......+..|+.+++.++||||+++++++.++. .++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            456899999999999999999985 568999999986432  1223456789999999999999999999887766 899


Q ss_pred             EEEccCCCChhhhhhhccCCCC------------------------------------c---------eeE-------EE
Q 048684          170 ILELSPHGSLASLLYAKWLPDK------------------------------------W---------THH-------IV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~~~~------------------------------------~---------~~~-------~~  197 (363)
                      |||||++|+|.+++....++..                                    .         ...       ..
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~  200 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC  200 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence            9999999999887742111100                                    0         000       01


Q ss_pred             eecccccCCCCchhhccC----CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHG----IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      ...+||+.|+|||++.+.    .++.++|||||||++|||++|+.||.+..................++.  ....+..+
T Consensus       201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~  278 (370)
T cd05596         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD--DIEISKQA  278 (370)
T ss_pred             CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC--cCCCCHHH
Confidence            134689999999998653    488999999999999999999999987655433333322211111211  11234458


Q ss_pred             HHHHHHccccCCCC--CCCHHHHHHHhh
Q 048684          274 LLIASACINQTSAC--RPQMSKVVQALR  299 (363)
Q Consensus       274 ~~li~~cl~~dP~~--RPt~~evl~~L~  299 (363)
                      .+++..||+.+|.+  ||++.+++++-.
T Consensus       279 ~~li~~~L~~~p~r~~R~s~~ell~h~~  306 (370)
T cd05596         279 KDLICAFLTDREVRLGRNGVDEIKSHPF  306 (370)
T ss_pred             HHHHHHHccChhhccCCCCHHHHhcCcc
Confidence            99999999999987  999999998644

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=4.8e-29  Score=237.02  Aligned_cols=204  Identities=18%  Similarity=0.243  Sum_probs=165.1

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch--hHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE--EMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~  168 (363)
                      ....|++.+.||.|.||.||+++. .+|+.+|+|.+.+....  .....+.+|+.+|.++. |||||.+++.+.... .+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            346788899999999999999984 55999999999765432  23468899999999998 999999999887766 89


Q ss_pred             EEEEccCCCChhhhhhhc-c-------------------------------------CCCC----------------cee
Q 048684          169 LILELSPHGSLASLLYAK-W-------------------------------------LPDK----------------WTH  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-~-------------------------------------~~~~----------------~~~  194 (363)
                      +|||+|.||.|.+.|... +                                     ....                ...
T Consensus       113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~  192 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG  192 (382)
T ss_pred             EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence            999999999999887532 0                                     0000                001


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      .....++||+.|+|||++....|+..+||||+||++|.|++|.+||.+...............  .+...++...+..+.
T Consensus       193 ~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~ak  270 (382)
T KOG0032|consen  193 ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISESAK  270 (382)
T ss_pred             ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHHHH
Confidence            245667899999999999999999999999999999999999999998876666655544433  344445566677799


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhh
Q 048684          275 LIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +++..|+..||..|+|+.+++++-+
T Consensus       271 d~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  271 DFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             HHHHHhcccCcccCCCHHHHhcCcc
Confidence            9999999999999999999999644

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=7.5e-29  Score=224.47  Aligned_cols=196  Identities=23%  Similarity=0.416  Sum_probs=148.9

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||+|+||.||+|.. .+|..||+|.+.... .......+.+|+.+++.++||||+++++++.... .++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            477788999999999999985 568999999986432 3344678999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhcc---C------------------------------CCC------ceeE---------------EEee
Q 048684          174 SPHGSLASLLYAKW---L------------------------------PDK------WTHH---------------IVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~------------------------------~~~------~~~~---------------~~~~  199 (363)
                      +++++|.+++....   +                              +..      ....               ....
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            99999998875310   0                              000      0000               0012


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|++.|+|||++.+..++.++|||||||++|+|+||+.||................. +.+...+    ...+.+++.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~i~~  235 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF-PPVSQMY----SQQLAQLIDQ  235 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCcccc----CHHHHHHHHH
Confidence            3578899999999999999999999999999999999999987654333322222222 2222223    3459999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.+|.+||++.++++.
T Consensus       236 ~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         236 CLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HccCCcccCcCHHHHhhC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=2.8e-29  Score=228.21  Aligned_cols=201  Identities=22%  Similarity=0.324  Sum_probs=151.7

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      +..+|...++||.|+||.||+|...++..||+|.+...... ....+..|+.+++.++||||+++++++.... .++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL-KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh-hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34578889999999999999999877899999998765432 2567889999999999999999999887766 789999


Q ss_pred             ccCCCChhhhhhhcc---C------------------------------------CCCceeEE---------------Ee
Q 048684          173 LSPHGSLASLLYAKW---L------------------------------------PDKWTHHI---------------VS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---~------------------------------------~~~~~~~~---------------~~  198 (363)
                      |+++|+|.+++....   +                                    .......+               ..
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~  162 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS  162 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence            999999998875210   0                                    00000000               00


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...++..|+|||++....++.++|||||||++|+|++ |+.||............ .....+..+.    ..+..+.+++
T Consensus       163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~i  237 (261)
T cd05148         163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI-TAGYRMPCPA----KCPQEIYKIM  237 (261)
T ss_pred             CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH-HhCCcCCCCC----CCCHHHHHHH
Confidence            1124567999999998899999999999999999998 89999766543322222 2222222222    3334589999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+||+.||.+|||+.++++.|+.
T Consensus       238 ~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         238 LECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHcCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.96  E-value=3.6e-30  Score=227.35  Aligned_cols=202  Identities=19%  Similarity=0.283  Sum_probs=146.0

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      +.|+...++|+|+||+||+++ ..+|+.||||++..... ....+-.++||++|++++|||+|.|+.+|.... ++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            467888899999999999999 56799999999976554 344455789999999999999999999877665 899999


Q ss_pred             ccCCCChhhhhh-------------------------------hccCCCCcee---------------------EEEeec
Q 048684          173 LSPHGSLASLLY-------------------------------AKWLPDKWTH---------------------HIVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~-------------------------------~~~~~~~~~~---------------------~~~~~~  200 (363)
                      ||+..-|.++=.                               ....|+....                     ...+..
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY  161 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY  161 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence            998754433211                               0111111000                     011223


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh--------------------hhhcCC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM--------------------KELVDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~--------------------~~~~~~  259 (363)
                      +.|.+|.|||.+.+ ..|+..+||||+||++.||++|.+-|.+.+.-...+.+.                    .+..-|
T Consensus       162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence            57889999999987 689999999999999999999999998765443333211                    111111


Q ss_pred             cCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDAY-----NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+....     .+..+.-+++++..||+.||++|++.++++.+
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            111111     12345578999999999999999999999964

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=9.1e-29  Score=225.48  Aligned_cols=198  Identities=22%  Similarity=0.373  Sum_probs=148.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .+|...+.||.|+||.||+|.. .+++.||+|.+.....  ....+.+|+.++..++||||+++++++.... .+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch--HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            4577888999999999999984 5688999999875432  2567899999999999999999999877655 7899999


Q ss_pred             cCCCChhhhhhhcc---CCC--------------------CceeE----------------E----------------Ee
Q 048684          174 SPHGSLASLLYAKW---LPD--------------------KWTHH----------------I----------------VS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~~~--------------------~~~~~----------------~----------------~~  198 (363)
                      +++|+|.+++....   ++.                    ...|.                +                ..
T Consensus        84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~  163 (263)
T cd05052          84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA  163 (263)
T ss_pred             CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence            99999998874210   000                    00000                0                00


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+++.|+|||++.+..++.++|||||||++|||+| |..||.+..... .+..+.....+..+...+    ..+.+++
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~li  238 (263)
T cd05052         164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKGYRMERPEGCP----PKVYELM  238 (263)
T ss_pred             CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCC----HHHHHHH
Confidence            0113567999999999999999999999999999998 999997654332 223333323333333333    4499999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+||+.||.+|||+.++++.|+.
T Consensus       239 ~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         239 RACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             HHHccCCcccCCCHHHHHHHHHh
Confidence            99999999999999999998853

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=1.5e-28  Score=221.99  Aligned_cols=193  Identities=26%  Similarity=0.417  Sum_probs=144.7

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChh
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA  180 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~  180 (363)
                      ++||+|+||.||+|...++..||+|.+...........|.+|+.++..++||||+++++++.... .++||||+++|+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36999999999999987889999999876655554567999999999999999999999887665 88999999999998


Q ss_pred             hhhhhccCC--------------------------------------CCceeEEE----------------eecccccCC
Q 048684          181 SLLYAKWLP--------------------------------------DKWTHHIV----------------SKIEGTFGY  206 (363)
Q Consensus       181 ~~l~~~~~~--------------------------------------~~~~~~~~----------------~~~~gt~~y  206 (363)
                      +++......                                      ......+.                ....+++.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y  160 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKW  160 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccc
Confidence            877421100                                      00000000                001234569


Q ss_pred             CCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC
Q 048684          207 LPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTS  285 (363)
Q Consensus       207 ~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  285 (363)
                      +|||++.+..++.++|||||||++|+|++ |..||........... +...........    .+..+.+++.+||+.+|
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~li~~~l~~~p  235 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ-VEKGYRMSCPQK----CPDDVYKVMQRCWDYKP  235 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-HHcCCCCCCCCC----CCHHHHHHHHHHcccCc
Confidence            99999998899999999999999999998 9999976543332222 222222222222    33459999999999999


Q ss_pred             CCCCCHHHHHHHhh
Q 048684          286 ACRPQMSKVVQALR  299 (363)
Q Consensus       286 ~~RPt~~evl~~L~  299 (363)
                      .+||++.++++.|.
T Consensus       236 ~~Rp~~~~l~~~l~  249 (250)
T cd05085         236 ENRPKFSELQKELA  249 (250)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=8.1e-29  Score=227.63  Aligned_cols=200  Identities=27%  Similarity=0.431  Sum_probs=148.0

Q ss_pred             cCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      +++|...+.||+|+||.||+|...      .+..||+|.+...........|.+|+.+++.++|+||+++++++.+.. .
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            467889999999999999999863      357899998875554444567999999999999999999999777655 7


Q ss_pred             EEEEEccCCCChhhhhhhccCCC----------------------------Ccee------EE------------Ee---
Q 048684          168 HLILELSPHGSLASLLYAKWLPD----------------------------KWTH------HI------------VS---  198 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~~----------------------------~~~~------~~------------~~---  198 (363)
                      ++||||+++|+|.+++.......                            ...|      .+            +.   
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg  164 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG  164 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCc
Confidence            89999999999998874321000                            0000      00            00   


Q ss_pred             ---------------ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          199 ---------------KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       199 ---------------~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                     ...+++.|+|||++.+..++.++|||||||++|||++ |..||.......... .+.....+..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~-~~~~~~~~~~~  243 (277)
T cd05036         165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME-FVTGGGRLDPP  243 (277)
T ss_pred             cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHcCCcCCCC
Confidence                           0012346999999999999999999999999999997 999998654433221 11111112222


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .    ..+..+.+++.+||+.+|.+|||+.+|+++|.
T Consensus       244 ~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         244 K----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             C----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            2    23345899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.2e-29  Score=238.66  Aligned_cols=201  Identities=21%  Similarity=0.285  Sum_probs=147.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++.++. .++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4788999999999999999985 568999999997432  1233466889999999999999999999887766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE-------------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH-------------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~-------------------  195 (363)
                      |||++|+|.+++....                                     +.......                   
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            9999999988774110                                     00000000                   


Q ss_pred             ----------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCC
Q 048684          196 ----------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD  241 (363)
Q Consensus       196 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~  241 (363)
                                                        .....+||+.|+|||++....++.++|||||||++|||++|..||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                              0012469999999999999999999999999999999999999998


Q ss_pred             CchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHHhh
Q 048684          242 SSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ---MSKVVQALR  299 (363)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~L~  299 (363)
                      ....................+..  ......+.+++.+|+. +|.+|++   +.+++++-.
T Consensus       241 ~~~~~~~~~~i~~~~~~~~~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~  298 (364)
T cd05599         241 SDNPQETYRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF  298 (364)
T ss_pred             CCCHHHHHHHHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence            76544333222221111111111  1123448889999986 9999998   999988643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=9.4e-29  Score=223.73  Aligned_cols=193  Identities=24%  Similarity=0.391  Sum_probs=142.7

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      +.||+|+||.||+|.. .+|+.||+|.+......+....|.+|+++++.++||||+++++++.... .++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3699999999999985 5789999998875554555678999999999999999999999887666 7899999999999


Q ss_pred             hhhhhhcc--CCC--------------------CceeE---------------EEee------------------ccccc
Q 048684          180 ASLLYAKW--LPD--------------------KWTHH---------------IVSK------------------IEGTF  204 (363)
Q Consensus       180 ~~~l~~~~--~~~--------------------~~~~~---------------~~~~------------------~~gt~  204 (363)
                      .+++....  ++.                    ...|.               .+..                  ..++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  160 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV  160 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence            98874211  000                    00000               0000                  01134


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      .|+|||++.++.++.++|||||||++|||++ |..||............ ........    +...+..+.+++.+||+.
T Consensus       161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~~l~~  235 (252)
T cd05084         161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI-EQGVRLPC----PELCPDAVYRLMERCWEY  235 (252)
T ss_pred             eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH-HcCCCCCC----cccCCHHHHHHHHHHcCC
Confidence            5999999999999999999999999999998 88998755433222211 11122222    222344589999999999


Q ss_pred             CCCCCCCHHHHHHHhh
Q 048684          284 TSACRPQMSKVVQALR  299 (363)
Q Consensus       284 dP~~RPt~~evl~~L~  299 (363)
                      +|.+|||+.+|++.|.
T Consensus       236 ~p~~Rps~~~~~~~l~  251 (252)
T cd05084         236 DPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ChhhCcCHHHHHHHHh
Confidence            9999999999998874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=5e-29  Score=229.36  Aligned_cols=201  Identities=20%  Similarity=0.302  Sum_probs=146.1

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..++||+|+||.||+|. ..+++.||+|.+...........|.+|+.++.+++||||+++++++...+ .++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            367888999999999999998 46789999999876544444567999999999999999999999877655 8899999


Q ss_pred             cCCCChhhhhh---------------------hcc------------CCCC-------------ceeEEEeecccccCCC
Q 048684          174 SPHGSLASLLY---------------------AKW------------LPDK-------------WTHHIVSKIEGTFGYL  207 (363)
Q Consensus       174 ~~~gsL~~~l~---------------------~~~------------~~~~-------------~~~~~~~~~~gt~~y~  207 (363)
                      +++|+|..+..                     ...            +...             .........+||..|+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~  160 (279)
T cd06619          81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYM  160 (279)
T ss_pred             CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhc
Confidence            99998864421                     000            0000             0001122346899999


Q ss_pred             CchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH------HHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL------VMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       208 aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |||++.+..++.++|||||||++|+|++|+.||.......      ...........+.+.   .......+.+++.+||
T Consensus       161 aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l  237 (279)
T cd06619         161 APERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP---VGQFSEKFVHFITQCM  237 (279)
T ss_pred             CceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC---CCcCCHHHHHHHHHHh
Confidence            9999999899999999999999999999999996532110      011111111112211   1112334899999999


Q ss_pred             ccCCCCCCCHHHHHHHhh
Q 048684          282 NQTSACRPQMSKVVQALR  299 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~  299 (363)
                      +.+|..||++.+++++..
T Consensus       238 ~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         238 RKQPKERPAPENLMDHPF  255 (279)
T ss_pred             hCChhhCCCHHHHhcCcc
Confidence            999999999999997643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-30  Score=250.90  Aligned_cols=189  Identities=25%  Similarity=0.435  Sum_probs=149.7

Q ss_pred             cccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChh
Q 048684          103 LIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA  180 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~  180 (363)
                      +||+|+||+||.|+. .+...+|||.+....+. ..+-+..||.+.++++|.|||+++|.+.+++ +-|.||-+|||+|.
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            599999999999994 44556899999765543 3667889999999999999999999988777 55789999999999


Q ss_pred             hhhhhccCCCCceeE--------------------E------------------------------------Eeeccccc
Q 048684          181 SLLYAKWLPDKWTHH--------------------I------------------------------------VSKIEGTF  204 (363)
Q Consensus       181 ~~l~~~~~~~~~~~~--------------------~------------------------------------~~~~~gt~  204 (363)
                      ++|..++.|.+....                    |                                    ...+.||+
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence            999877655431110                    0                                    11234999


Q ss_pred             CCCCchhhccC--CCCccceEEechhHHHHHHhCCCCCCCchhh-HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          205 GYLPPEFFMHG--IADEKTDVYAYGVLLLEIITGRQALDSSQKS-LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       205 ~y~aPE~~~~~--~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      .|||||++-.+  .|+.++|||||||++.||.||++||...... ..+++.-.-.+.|.    .+.+.+.+...+|.+|+
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~----iPeelsaeak~FilrcF  816 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPP----IPEELSAEAKNFILRCF  816 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCC----CcHHHHHHHHHHHHHHc
Confidence            99999999766  5999999999999999999999999865432 23333222223333    46677788999999999


Q ss_pred             ccCCCCCCCHHHHHH
Q 048684          282 NQTSACRPQMSKVVQ  296 (363)
Q Consensus       282 ~~dP~~RPt~~evl~  296 (363)
                      .+||..||++.+++.
T Consensus       817 epd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  817 EPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CCCcccCccHHHhcc
Confidence            999999999999996

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=4.8e-29  Score=240.91  Aligned_cols=205  Identities=22%  Similarity=0.355  Sum_probs=152.3

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEc
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVE  164 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~  164 (363)
                      ....++|.+.+.||+|+||.||+|.+.      .+..||||.+...........+.+|+.+|.++. |||||++++++..
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~  112 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK  112 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence            334457888899999999999999853      246799999976544444567999999999997 9999999998877


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccC-------------------------------------------------------
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWL-------------------------------------------------------  188 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------------------  188 (363)
                      .. .++|||||++|+|.++++....                                                       
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM  192 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence            55 8999999999999988753210                                                       


Q ss_pred             ---------------------------------------------------------------CC-CceeE---------
Q 048684          189 ---------------------------------------------------------------PD-KWTHH---------  195 (363)
Q Consensus       189 ---------------------------------------------------------------~~-~~~~~---------  195 (363)
                                                                                     .. ...+.         
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl  272 (401)
T cd05107         193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI  272 (401)
T ss_pred             hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence                                                                           00 00000         


Q ss_pred             -------E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHH
Q 048684          196 -------I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMW  250 (363)
Q Consensus       196 -------~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~  250 (363)
                             +                 .....|++.|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~  352 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY  352 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence                   0                 001124567999999998899999999999999999998 899997654433333


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.....+..+...+    ..+.+|+..||+.+|..||++.+|+..|+.
T Consensus       353 ~~~~~~~~~~~p~~~~----~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         353 NAIKRGYRMAKPAHAS----DEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             HHHHcCCCCCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            3333322222222233    459999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.2e-29  Score=239.47  Aligned_cols=198  Identities=20%  Similarity=0.373  Sum_probs=151.8

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecC-CCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..|++++.||+||.+.||++...+.+.+|+|++.. ..+......|.+|+..|.+|+ |.+||+||+|....+ +|+|||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            45889999999999999999988788899888753 334556788999999999995 999999999988766 899999


Q ss_pred             ccCCCChhhhhhhcc------------------------------------------------------CCCCceeEEEe
Q 048684          173 LSPHGSLASLLYAKW------------------------------------------------------LPDKWTHHIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~------------------------------------------------------~~~~~~~~~~~  198 (363)
                      |=.. +|..+|..+.                                                      +..+.+..+..
T Consensus       441 ~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kd  519 (677)
T KOG0596|consen  441 CGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKD  519 (677)
T ss_pred             cccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeec
Confidence            8654 7777664221                                                      11111222223


Q ss_pred             ecccccCCCCchhhccC-----------CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          199 KIEGTFGYLPPEFFMHG-----------IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                      .-+||+.||+||.+...           +.+.+|||||+|||||+|+.|++||...   ...|..+..+.+|.-...|+.
T Consensus       520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---~n~~aKl~aI~~P~~~Iefp~  596 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---INQIAKLHAITDPNHEIEFPD  596 (677)
T ss_pred             cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---HHHHHHHHhhcCCCccccccC
Confidence            34799999999998543           2568999999999999999999999753   335666777777744333322


Q ss_pred             HH-HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          268 EQ-LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       268 ~~-~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      -- -..+++++..||..||.+||++.+||++
T Consensus       597 ~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  597 IPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             CCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            11 1229999999999999999999999985

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-29  Score=239.63  Aligned_cols=207  Identities=22%  Similarity=0.314  Sum_probs=158.5

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .+.+...+.++||+|-||.|..+....+..||||.++.......+..|..|+++|.+++|||||.|+|.|..++ +++|+
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            34456677899999999999999998789999999998877777899999999999999999999999998766 88999


Q ss_pred             EccCCCChhhhhhhccCCCC--------------------------------------------------------ceeE
Q 048684          172 ELSPHGSLASLLYAKWLPDK--------------------------------------------------------WTHH  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~~~--------------------------------------------------------~~~~  195 (363)
                      |||++|+|..||.....+..                                                        ...+
T Consensus       615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            99999999999864322220                                                        0011


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHH--hCCCCCCCchhhHHHHHhhhhhcC-CcC--CCCCCHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEII--TGRQALDSSQKSLVMWSSMKELVD-PTL--GDAYNTEQL  270 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ell--tG~~P~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~  270 (363)
                      +-...+-...|||||.+..+++|.+||||+|||+|||++  +...||.......+.... .+.++ +..  -...+.-+.
T Consensus       695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~-~~~~~~~~~~~~l~~P~~cp  773 (807)
T KOG1094|consen  695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA-GEFFRDQGRQVVLSRPPACP  773 (807)
T ss_pred             eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh-hhhcCCCCcceeccCCCcCc
Confidence            111223346799999999999999999999999999976  478999876544433221 11111 110  111233445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.+++..||..+..+||++.++...|..
T Consensus       774 ~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  774 QGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             HHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            559999999999999999999999987754

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.96  E-value=6.8e-29  Score=225.05  Aligned_cols=196  Identities=17%  Similarity=0.280  Sum_probs=148.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      +|+..+.||.|+||.||++.. .++..||+|.+.........+.+..|+.+++.++||||+++++++.... .++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            477889999999999999984 5689999999865444444678889999999999999999999877665 89999999


Q ss_pred             CCCChhhhhhhcc---------------------------------------CCCCcee---------------EEEeec
Q 048684          175 PHGSLASLLYAKW---------------------------------------LPDKWTH---------------HIVSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~---------------------------------------~~~~~~~---------------~~~~~~  200 (363)
                      ++|+|.+++....                                       +......               ......
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY  160 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence            9999987763100                                       0000000               001123


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      .|++.|+|||++.+..++.++||||||+++|+|++|..||..................+ ++..    ....+.+++.+|
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~li~~~  235 (255)
T cd08219         161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-LPSH----YSYELRSLIKQM  235 (255)
T ss_pred             cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC-CCcc----cCHHHHHHHHHH
Confidence            58888999999998889999999999999999999999998765443333332222221 2222    334588999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      |+.||.+|||+.+++..
T Consensus       236 l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         236 FKRNPRSRPSATTILSR  252 (255)
T ss_pred             HhCCcccCCCHHHHhhc
Confidence            99999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-28  Score=223.89  Aligned_cols=199  Identities=17%  Similarity=0.279  Sum_probs=149.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP----EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||+|.+.....    ......+.+|+.++.+++||||+++++++.... .++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5789999999999999999984 5689999999864321    123457889999999999999999999887766 889


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------CCCCceeEEE---------------
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------LPDKWTHHIV---------------  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~~---------------  197 (363)
                      |+||+++++|.+++....                                     +.......+.               
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999999999987763100                                     0000000000               


Q ss_pred             ---eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          198 ---SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       198 ---~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                         ....|+..|+|||++.+..++.++|||||||++|||++|+.||..................+.++..    ....+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  237 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSH----VSPDAR  237 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCcc----CCHHHH
Confidence               1234778899999999989999999999999999999999999765443333332222222223333    334589


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHh
Q 048684          275 LIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +++..||..+|.+|||+.+++++.
T Consensus       238 ~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         238 NFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             HHHHHHhhcCcccCCCHHHHhhCC
Confidence            999999999999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.96  E-value=1.4e-28  Score=223.79  Aligned_cols=198  Identities=21%  Similarity=0.319  Sum_probs=149.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSP  175 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~  175 (363)
                      ++|++.+.||+|+||.||+|...++..||+|.+......  ...|.+|+.++++++||||+++++++.....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecC
Confidence            578889999999999999999877888999998754432  357999999999999999999999987777899999999


Q ss_pred             CCChhhhhhhcc---CC------------------------------------CCceeEE-----E-----------eec
Q 048684          176 HGSLASLLYAKW---LP------------------------------------DKWTHHI-----V-----------SKI  200 (363)
Q Consensus       176 ~gsL~~~l~~~~---~~------------------------------------~~~~~~~-----~-----------~~~  200 (363)
                      +|+|.+++....   ++                                    ......+     .           ...
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence            999988774210   00                                    0000000     0           011


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.+..++.++|||||||++|||++ |..||.+......... +.....+..+.    ..+..+.+++.+
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~li~~  238 (260)
T cd05070         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ-VERGYRMPCPQ----DCPISLHELMLQ  238 (260)
T ss_pred             CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHcCCCCCCCC----cCCHHHHHHHHH
Confidence            23457999999988899999999999999999999 8999976543332222 22222222222    233459999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||+.+|.+|||+.++...|+.
T Consensus       239 ~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         239 CWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HcccCcccCcCHHHHHHHHhc
Confidence            999999999999999988853

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1e-28  Score=237.18  Aligned_cols=201  Identities=17%  Similarity=0.240  Sum_probs=145.9

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||+||++. ..+|+.||||.+....  .......+.+|+.++..++|||||++++++.++. .|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            478889999999999999998 4678999999986432  2233567889999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeEE------------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI------------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~------------------  196 (363)
                      |||++|+|.+++....                                     +.......+                  
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            9999999988763100                                     000000000                  


Q ss_pred             --------------------------------------------EeecccccCCCCchhhccCCCCccceEEechhHHHH
Q 048684          197 --------------------------------------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLE  232 (363)
Q Consensus       197 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~e  232 (363)
                                                                  ....+||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                                                        002469999999999999999999999999999999


Q ss_pred             HHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHHhh
Q 048684          233 IITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR---PQMSKVVQALR  299 (363)
Q Consensus       233 lltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~~L~  299 (363)
                      |+||.+||.+..................++..  ......+.+++.+|+. +|.+|   +++.+++.+-.
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         241 CLIGWPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHccCCccCCCCC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence            99999999876543332222211111111111  1123458899999997 66665   69999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=4.9e-29  Score=226.33  Aligned_cols=195  Identities=23%  Similarity=0.388  Sum_probs=144.1

Q ss_pred             CcccccCceEEEEEEE-cC---CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL-ED---GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~---g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~g  177 (363)
                      ++||+|+||.||+|.. ..   +..||+|.+...........+.+|+.+++.++|||||++++++.....++||||+++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            4699999999999974 22   2689999997665444457899999999999999999999998877799999999999


Q ss_pred             Chhhhhhhcc-C------------------------------C------CCceeEEE------------------eeccc
Q 048684          178 SLASLLYAKW-L------------------------------P------DKWTHHIV------------------SKIEG  202 (363)
Q Consensus       178 sL~~~l~~~~-~------------------------------~------~~~~~~~~------------------~~~~g  202 (363)
                      +|.+++.... +                              +      ......+.                  ....+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRW  160 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccc
Confidence            9998874211 0                              0      00000000                  00112


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      +..|+|||.+.+..++.++|||||||++|||++ |..||......... ..+........+...    +..+.+++.+||
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~l~~li~~cl  235 (257)
T cd05060         161 PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-AMLESGERLPRPEEC----PQEIYSIMLSCW  235 (257)
T ss_pred             cccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH-HHHHcCCcCCCCCCC----CHHHHHHHHHHh
Confidence            457999999998999999999999999999998 99999765543222 222222111122223    345899999999


Q ss_pred             ccCCCCCCCHHHHHHHhhcC
Q 048684          282 NQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..+|.+||++.++++.|+..
T Consensus       236 ~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         236 KYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             cCChhhCcCHHHHHHHHHhc
Confidence            99999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=1.7e-28  Score=224.46  Aligned_cols=193  Identities=21%  Similarity=0.316  Sum_probs=136.7

Q ss_pred             CcccccCceEEEEEEEcC---CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQLED---GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      +.||+|+||.||+|...+   +..+|+|.+...........|.+|+.++++++||||+++++++.+.. .++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            369999999999998543   45799999876554444567899999999999999999999887655 78999999999


Q ss_pred             ChhhhhhhccCC------------------------------------------CCceeEE-----------------Ee
Q 048684          178 SLASLLYAKWLP------------------------------------------DKWTHHI-----------------VS  198 (363)
Q Consensus       178 sL~~~l~~~~~~------------------------------------------~~~~~~~-----------------~~  198 (363)
                      +|.+++......                                          ......+                 ..
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            998887421100                                          0000000                 01


Q ss_pred             ecccccCCCCchhhccC-------CCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhh----hcCCcCCCCCC
Q 048684          199 KIEGTFGYLPPEFFMHG-------IADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKE----LVDPTLGDAYN  266 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~-------~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~----~~~~~~~~~~~  266 (363)
                      ...|++.|+|||++...       .++.++|||||||++|||++ |+.||...............    ...+.+.... 
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL-  239 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC-
Confidence            12356789999998642       35889999999999999997 99999765433222111111    1122222222 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         ...+.+++..|| .+|.+|||+.+|+..|+
T Consensus       240 ---~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         240 ---SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             ---ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence               334788999999 68999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=1.9e-29  Score=237.39  Aligned_cols=195  Identities=17%  Similarity=0.281  Sum_probs=142.7

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHH---HhCCCCCcceEEEEEEcCC-eEEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGII---VHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      |.+.+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++   ..++||||+++++++..++ .|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            56678999999999999984 568999999997432  122345677776665   5678999999999887766 8999


Q ss_pred             EEccCCCChhhhhhhccCCC------------------------------------Cce---------------eEEEee
Q 048684          171 LELSPHGSLASLLYAKWLPD------------------------------------KWT---------------HHIVSK  199 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~~~------------------------------------~~~---------------~~~~~~  199 (363)
                      |||+++|+|..++....++.                                    ...               ......
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTST  160 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccc
Confidence            99999999977664211100                                    000               001123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  +..+...+    ..+.+++.+
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~~p~~~~----~~~~~li~~  234 (324)
T cd05589         161 FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE--VRYPRFLS----REAISIMRR  234 (324)
T ss_pred             cccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCC----HHHHHHHHH
Confidence            468999999999999999999999999999999999999998765443332222221  22223333    448899999


Q ss_pred             ccccCCCCCC-----CHHHHHHHh
Q 048684          280 CINQTSACRP-----QMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RP-----t~~evl~~L  298 (363)
                      ||+.||.+||     ++.+++++.
T Consensus       235 ~L~~dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         235 LLRRNPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             HhhcCHhHcCCCCCCCHHHHhhCC
Confidence            9999999999     577777654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=2.3e-28  Score=222.31  Aligned_cols=193  Identities=22%  Similarity=0.350  Sum_probs=143.3

Q ss_pred             cccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCCCh
Q 048684          103 LIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL  179 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~gsL  179 (363)
                      .||+|+||.||+|.+.   ++..||||.+.........+.|.+|+.++++++||||+++++++.....++||||+++|+|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            3899999999999753   3567999998765544445679999999999999999999999887779999999999999


Q ss_pred             hhhhhhcc--CC------------------------------------CCceeEE------------------Eeecccc
Q 048684          180 ASLLYAKW--LP------------------------------------DKWTHHI------------------VSKIEGT  203 (363)
Q Consensus       180 ~~~l~~~~--~~------------------------------------~~~~~~~------------------~~~~~gt  203 (363)
                      .+++....  ++                                    ......+                  .....++
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  161 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWP  161 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCC
Confidence            98874210  00                                    0000000                  0001124


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      +.|+|||++....++.++|||||||++|||++ |..||......... ..+.....+..+...+    ..+.+++..||+
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~l~~li~~c~~  236 (257)
T cd05115         162 LKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM-SFIEQGKRLDCPAECP----PEMYALMKDCWI  236 (257)
T ss_pred             cccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH-HHHHCCCCCCCCCCCC----HHHHHHHHHHcC
Confidence            67999999988889999999999999999996 99999866443322 2222222222223333    448899999999


Q ss_pred             cCCCCCCCHHHHHHHhhc
Q 048684          283 QTSACRPQMSKVVQALRG  300 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L~~  300 (363)
                      .+|.+||++.+|.+.|+.
T Consensus       237 ~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         237 YKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             CChhhCcCHHHHHHHHhh
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=2.1e-29  Score=232.10  Aligned_cols=203  Identities=22%  Similarity=0.345  Sum_probs=143.5

Q ss_pred             CccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHL  169 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~l  169 (363)
                      |...+.||+|+||+||++..     .++..||+|.+...........|.+|+.++++++||||+++++++...   ..++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37788999999999988652     357899999997654444457889999999999999999999987643   2789


Q ss_pred             EEEccCCCChhhhhhhccCC------------------------------------CCceeEE-----------------
Q 048684          170 ILELSPHGSLASLLYAKWLP------------------------------------DKWTHHI-----------------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~~------------------------------------~~~~~~~-----------------  196 (363)
                      ||||+++|+|.+++....++                                    ......+                 
T Consensus        86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  165 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR  165 (283)
T ss_pred             EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhc
Confidence            99999999998876421110                                    0000000                 


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH----------HhhhhhcCCcCCCCC
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----------SSMKELVDPTLGDAY  265 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~----------~~~~~~~~~~~~~~~  265 (363)
                       .....++..|+|||++.+..++.++|||||||++|||+||..||..........          .......+.......
T Consensus       166 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd05080         166 VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC  245 (283)
T ss_pred             cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC
Confidence             001124556999999998899999999999999999999999986533211000          000111111111111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +......+.+++..||+.+|.+|||+.++++.|+.
T Consensus       246 ~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~  280 (283)
T cd05080         246 PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE  280 (283)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            22234559999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=1.3e-28  Score=227.68  Aligned_cols=200  Identities=22%  Similarity=0.354  Sum_probs=148.1

Q ss_pred             CCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      .+|.+.+.||+|+||+||++..      .++..+|+|.+.... ......+.+|+.++.+++||||+++++++.... .+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            5788889999999999999974      234568999887544 334568999999999999999999999887665 88


Q ss_pred             EEEEccCCCChhhhhhhcc--------------CCC------------------------------------CceeE---
Q 048684          169 LILELSPHGSLASLLYAKW--------------LPD------------------------------------KWTHH---  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------~~~------------------------------------~~~~~---  195 (363)
                      +||||+++|+|.+++....              ++.                                    .....   
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEecc
Confidence            9999999999988764211              000                                    00000   


Q ss_pred             --------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCc
Q 048684          196 --------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPT  260 (363)
Q Consensus       196 --------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~  260 (363)
                                    ......+++.|+|||++.+..++.++|||||||++|||+| |.+||................ .+.
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-~~~  242 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-VLQ  242 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-cCC
Confidence                          0011124668999999998899999999999999999999 999997665433322222222 122


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .....+    ..+.+++.+||+.||.+|||+.+++..|+..
T Consensus       243 ~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~  279 (288)
T cd05093         243 RPRTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNL  279 (288)
T ss_pred             CCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            222333    3499999999999999999999999888644

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.4e-28  Score=225.61  Aligned_cols=200  Identities=22%  Similarity=0.358  Sum_probs=149.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .++|.+.+.||+|+||.||+|...      .+..||+|.+...........+.+|+.++..++||||+++++++..+. .
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            357888899999999999999853      236899999876554444568899999999999999999999887666 8


Q ss_pred             EEEEEccCCCChhhhhhhccC-----------------------------------------------CCCceeE-----
Q 048684          168 HLILELSPHGSLASLLYAKWL-----------------------------------------------PDKWTHH-----  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------~~~~~~~-----  195 (363)
                      ++||||+++|+|.+++.....                                               .......     
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg  164 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG  164 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence            899999999999887642100                                               0000000     


Q ss_pred             ------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          196 ------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       196 ------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                  ......++..|+|||.+.++.++.++|||||||++|||+| |..||........... +.....+..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~  243 (277)
T cd05032         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF-VIDGGHLDLP  243 (277)
T ss_pred             cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH-HhcCCCCCCC
Confidence                        0011235678999999988899999999999999999998 9999976554333222 2222222333


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...    ...+.+++..||+.+|.+|||+.++++.|+
T Consensus       244 ~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         244 ENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            333    445999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.96  E-value=1.3e-28  Score=232.24  Aligned_cols=192  Identities=17%  Similarity=0.244  Sum_probs=143.8

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      +.||+|+||.||++.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++...+ .++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999984 568999999997532  2234567889999999999999999999877665 89999999999


Q ss_pred             Chhhhhhhcc-------------------------------------CCCCce---------------eEEEeecccccC
Q 048684          178 SLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTFG  205 (363)
Q Consensus       178 sL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~~  205 (363)
                      +|.+++....                                     +.....               .......+||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            9977663110                                     000000               011123569999


Q ss_pred             CCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC
Q 048684          206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTS  285 (363)
Q Consensus       206 y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  285 (363)
                      |+|||++.+..++.++|||||||++|||++|+.||...............  +..++...+    ..+.+++.+||+.||
T Consensus       161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~----~~~~~li~~~L~~dP  234 (328)
T cd05593         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--DIKFPRTLS----ADAKSLLSGLLIKDP  234 (328)
T ss_pred             ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC--CccCCCCCC----HHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999765443322222111  222233333    448999999999999


Q ss_pred             CCCC-----CHHHHHHHhh
Q 048684          286 ACRP-----QMSKVVQALR  299 (363)
Q Consensus       286 ~~RP-----t~~evl~~L~  299 (363)
                      .+||     ++.+++++.+
T Consensus       235 ~~R~~~~~~~~~~il~h~~  253 (328)
T cd05593         235 NKRLGGGPDDAKEIMRHSF  253 (328)
T ss_pred             HHcCCCCCCCHHHHhcCCC
Confidence            9997     8999997644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=1.9e-28  Score=223.42  Aligned_cols=197  Identities=21%  Similarity=0.429  Sum_probs=147.7

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-----EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      +|...+.||.|+||+||+|...+|..+|||.+.....     ......+.+|+.+++.++|+||+++++++.+.. .+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4778899999999999999987899999999864321     223456889999999999999999999988766 7899


Q ss_pred             EEccCCCChhhhhhhcc-C------------------------------------CCCcee-------------------
Q 048684          171 LELSPHGSLASLLYAKW-L------------------------------------PDKWTH-------------------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-~------------------------------------~~~~~~-------------------  194 (363)
                      |||+++|+|.+++.... +                                    ......                   
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence            99999999998874210 0                                    000000                   


Q ss_pred             --EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh-hcCCcCCCCCCHHHHH
Q 048684          195 --HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE-LVDPTLGDAYNTEQLT  271 (363)
Q Consensus       195 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  271 (363)
                        .......|++.|+|||++.+..++.++|||||||++|+|++|..||............... ...+.++..++    .
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  236 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS----A  236 (265)
T ss_pred             ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCC----H
Confidence              0112235788999999999888999999999999999999999999765433222111111 12233333344    4


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+.+++.+||+.+|.+||++.+++.+
T Consensus       237 ~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         237 AAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            48999999999999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=1.2e-28  Score=224.08  Aligned_cols=197  Identities=18%  Similarity=0.323  Sum_probs=146.5

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|...+.||+|+||+||.|...++..||||.+......  ...|.+|+.++.+++||||+++++++.... .++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc--HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            457788899999999999998776677999998754332  357899999999999999999999887665 79999999


Q ss_pred             CCCChhhhhhhcc--CC------------------------------------CCceeEE----------------Eeec
Q 048684          175 PHGSLASLLYAKW--LP------------------------------------DKWTHHI----------------VSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--~~------------------------------------~~~~~~~----------------~~~~  200 (363)
                      ++|+|.+++....  +.                                    ......+                ....
T Consensus        82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~  161 (256)
T cd05113          82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGS  161 (256)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCC
Confidence            9999988874210  00                                    0000000                0011


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.+..++.++|||||||++|||+| |..||.............. ...+......    ...+.+++.+
T Consensus       162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~li~~  236 (256)
T cd05113         162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ-GLRLYRPHLA----SEKVYAIMYS  236 (256)
T ss_pred             ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc-CCCCCCCCCC----CHHHHHHHHH
Confidence            24567999999998889999999999999999999 9999976554333222222 2222222223    3458999999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      ||+.+|.+||++.+++..|+
T Consensus       237 cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         237 CWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HcCCCcccCCCHHHHHHhhC
Confidence            99999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.9e-29  Score=236.74  Aligned_cols=202  Identities=19%  Similarity=0.210  Sum_probs=149.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+....  .......+..|+.++..++||||+++++++.++. .++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4688899999999999999985 479999999987432  1233567889999999999999999999877665 89999


Q ss_pred             EccCCCChhhhhhhc-c------------------------------------CCCCcee--------------------
Q 048684          172 ELSPHGSLASLLYAK-W------------------------------------LPDKWTH--------------------  194 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-~------------------------------------~~~~~~~--------------------  194 (363)
                      ||+++|+|.+++... .                                    +......                    
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999998877421 0                                    0000000                    


Q ss_pred             ------------------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH
Q 048684          195 ------------------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW  250 (363)
Q Consensus       195 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~  250 (363)
                                              .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~  240 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN  240 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence                                    01123458999999999999999999999999999999999999998765433322


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHHHhhc
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ-MSKVVQALRG  300 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~L~~  300 (363)
                      ..........++...  .....+.+++..|+. ||.+||+ +.+++++...
T Consensus       241 ~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~  288 (350)
T cd05573         241 KIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF  288 (350)
T ss_pred             HHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence            222200111111111  134458999999997 9999999 9999986543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.96  E-value=1.3e-29  Score=232.91  Aligned_cols=197  Identities=24%  Similarity=0.380  Sum_probs=147.2

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      .|+..+.||+|+||.||+|.. .+|..||+|.+...........+.+|+.++++++||||+++++++..+. .++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            456667899999999999985 5688999999875554445678999999999999999999999877665 89999999


Q ss_pred             CCCChhhhhhhccCCC--------------------C----------------ceeEE---------------Eeecccc
Q 048684          175 PHGSLASLLYAKWLPD--------------------K----------------WTHHI---------------VSKIEGT  203 (363)
Q Consensus       175 ~~gsL~~~l~~~~~~~--------------------~----------------~~~~~---------------~~~~~gt  203 (363)
                      ++|+|.+++....+..                    .                ....+               .....|+
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  164 (277)
T cd06642          85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT  164 (277)
T ss_pred             CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCc
Confidence            9999988764211000                    0                00000               0112478


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      ..|+|||++.+..++.++|||||||++|||+||+.||.........+. +.....+.+..    .....+.+++.+||+.
T Consensus       165 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~li~~~l~~  239 (277)
T cd06642         165 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL-IPKNSPPTLEG----QYSKPFKEFVEACLNK  239 (277)
T ss_pred             ccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh-hhcCCCCCCCc----ccCHHHHHHHHHHccC
Confidence            889999999988999999999999999999999999975443322221 11122222222    2344589999999999


Q ss_pred             CCCCCCCHHHHHHHh
Q 048684          284 TSACRPQMSKVVQAL  298 (363)
Q Consensus       284 dP~~RPt~~evl~~L  298 (363)
                      +|.+||++.+++.+-
T Consensus       240 ~p~~Rp~~~~il~~~  254 (277)
T cd06642         240 DPRFRPTAKELLKHK  254 (277)
T ss_pred             CcccCcCHHHHHHhH
Confidence            999999999999853

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.96  E-value=7.8e-29  Score=233.16  Aligned_cols=192  Identities=16%  Similarity=0.231  Sum_probs=143.5

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      +.||+|+||.||++.. .+|..||+|.+....  .......+.+|+.++..++||||+++++++...+ .++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999984 578999999987432  2233567889999999999999999999777665 89999999999


Q ss_pred             Chhhhhhhcc-------------------------------------CCCCcee---------------EEEeecccccC
Q 048684          178 SLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTFG  205 (363)
Q Consensus       178 sL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~~  205 (363)
                      +|..++....                                     +......               ......+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            9987664110                                     0000000               01123468999


Q ss_pred             CCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC
Q 048684          206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTS  285 (363)
Q Consensus       206 y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  285 (363)
                      |+|||++.+..++.++|||||||++|||++|+.||................  ..++...+    ..+.+++..||+.||
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~----~~~~~li~~~L~~dP  234 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLS----PEAKSLLAGLLKKDP  234 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCC----HHHHHHHHHHccCCH
Confidence            999999999999999999999999999999999997665433332222221  12223334    448999999999999


Q ss_pred             CCCC-----CHHHHHHHhh
Q 048684          286 ACRP-----QMSKVVQALR  299 (363)
Q Consensus       286 ~~RP-----t~~evl~~L~  299 (363)
                      .+||     ++.+++++-.
T Consensus       235 ~~R~~~~~~~~~~~l~h~~  253 (323)
T cd05595         235 KQRLGGGPSDAKEVMEHRF  253 (323)
T ss_pred             HHhCCCCCCCHHHHHcCCC
Confidence            9998     8999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=7.2e-29  Score=231.10  Aligned_cols=203  Identities=19%  Similarity=0.246  Sum_probs=142.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||.|+||+||+|.. .+|+.||||.+...........+.+|+.+++.++||||+++++++.... .++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            46899999999999999999985 4689999999875443333456789999999999999999999887666 889999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCcee---------------EEEee
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWTH---------------HIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~~---------------~~~~~  199 (363)
                      |+. |+|.+++....                                      +......               .....
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  162 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN  162 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence            996 57766553110                                      0000000               00112


Q ss_pred             cccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-CC------------c-----
Q 048684          200 IEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-DP------------T-----  260 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-~~------------~-----  260 (363)
                      ..||+.|+|||++.+ ..++.++|||||||++|||+||..||.+..........+.... .+            .     
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd07869         163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER  242 (303)
T ss_pred             CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence            357889999999865 4589999999999999999999999986532211111111000 00            0     


Q ss_pred             CCCCCCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          261 LGDAYNT---------EQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       261 ~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .....+.         .....+.+++.+||+.||.+|||+.+++++-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~  289 (303)
T cd07869         243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE  289 (303)
T ss_pred             ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence            0000000         0124578999999999999999999999753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=1.8e-28  Score=223.33  Aligned_cols=203  Identities=26%  Similarity=0.391  Sum_probs=150.1

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||.||+|... +|+.||+|.+....  .......+.+|+.++++++|+||+++++++...+ .++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            67899999999999999999854 79999999886322  2333578999999999999999999999877655 88999


Q ss_pred             EccCCCChhhhhhhcc-----------------------------------------CCCCceeE---------------
Q 048684          172 ELSPHGSLASLLYAKW-----------------------------------------LPDKWTHH---------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-----------------------------------------~~~~~~~~---------------  195 (363)
                      ||+++|+|.+++....                                         +.......               
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            9999999987763100                                         00000000               


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.......... ..+.....+..+   .......+.
T Consensus       162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  238 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLP---ADHYSEELR  238 (267)
T ss_pred             ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCC---hhhcCHHHH
Confidence            0112357888999999998899999999999999999999999997554322111 111111111111   113344589


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++.+||..+|.+|||+.+|++.|+..
T Consensus       239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         239 DLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            999999999999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.96  E-value=2.5e-29  Score=238.50  Aligned_cols=202  Identities=23%  Similarity=0.405  Sum_probs=148.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-  166 (363)
                      .++|.+.+.||+|+||+||+|..      .+++.||||.+...........+.+|+.++.++ +|||||++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            36799999999999999999963      347899999997655444467789999999999 6899999999876543 


Q ss_pred             -eEEEEEccCCCChhhhhhhccC---------------------------------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL---------------------------------------------------------  188 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------------------  188 (363)
                       .++|||||++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence             7899999999999888753210                                                         


Q ss_pred             -----------C-------------------C-Ccee----------------EEE-----------------eeccccc
Q 048684          189 -----------P-------------------D-KWTH----------------HIV-----------------SKIEGTF  204 (363)
Q Consensus       189 -----------~-------------------~-~~~~----------------~~~-----------------~~~~gt~  204 (363)
                                 .                   . ...|                .+.                 ....+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL  245 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence                       0                   0 0000                000                 0011346


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      .|+|||++.+..++.++|||||||++|+|++ |..||............+.....+..+...+    ..+.+++..||+.
T Consensus       246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~cl~~  321 (343)
T cd05103         246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHG  321 (343)
T ss_pred             ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCC----HHHHHHHHHHccC
Confidence            7999999998899999999999999999997 9999976543322222222222222222233    3488999999999


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 048684          284 TSACRPQMSKVVQALRG  300 (363)
Q Consensus       284 dP~~RPt~~evl~~L~~  300 (363)
                      ||.+|||+.+|+++|+.
T Consensus       322 ~p~~Rps~~eil~~l~~  338 (343)
T cd05103         322 EPSQRPTFSELVEHLGN  338 (343)
T ss_pred             ChhhCcCHHHHHHHHHH
Confidence            99999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=4.2e-29  Score=229.50  Aligned_cols=198  Identities=24%  Similarity=0.379  Sum_probs=150.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ..|+..+.||.|+||.||+|.. .++..||||.+...........+.+|+.++++++||||+++++++.++. .++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3577788999999999999985 4688999999876554445678999999999999999999999887766 8899999


Q ss_pred             cCCCChhhhhhhccCCC--------------------Ccee----------------E---------------EEeeccc
Q 048684          174 SPHGSLASLLYAKWLPD--------------------KWTH----------------H---------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~~--------------------~~~~----------------~---------------~~~~~~g  202 (363)
                      +++|+|.+++....++.                    ...+                .               ......|
T Consensus        84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  163 (277)
T cd06640          84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG  163 (277)
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccC
Confidence            99999988774211000                    0000                0               0111247


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      +..|+|||++.+..++.++|||||||++|||+||..||............ .....+    .........+.+++.+||+
T Consensus       164 ~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~li~~~l~  238 (277)
T cd06640         164 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-PKNNPP----TLTGEFSKPFKEFIDACLN  238 (277)
T ss_pred             cccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-hcCCCC----CCchhhhHHHHHHHHHHcc
Confidence            78899999999888999999999999999999999999865433222211 111112    2334455669999999999


Q ss_pred             cCCCCCCCHHHHHHHh
Q 048684          283 QTSACRPQMSKVVQAL  298 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L  298 (363)
                      .+|..||++.+++.+-
T Consensus       239 ~~p~~Rp~~~~il~~~  254 (277)
T cd06640         239 KDPSFRPTAKELLKHK  254 (277)
T ss_pred             cCcccCcCHHHHHhCh
Confidence            9999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.7e-28  Score=230.83  Aligned_cols=192  Identities=22%  Similarity=0.333  Sum_probs=142.8

Q ss_pred             CcccccCceEEEEEEE----cCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684          102 NLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.||+|+||.||++..    .+|+.||||.+....   .......+..|+.++..++||||+++++++..++ .|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999974    357899999987432   1223456789999999999999999999777655 8999999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCCCcee---------------EEEeecc
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~  201 (363)
                      +++|+|.+++....                                     +......               ......+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC  161 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccC
Confidence            99999987763110                                     0000000               0112246


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|+|||++.+..++.++|||||||++|||++|+.||................  ..++...+    ..+.+++.+||
T Consensus       162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~li~~~l  235 (323)
T cd05584         162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK--LNLPPYLT----PEARDLLKKLL  235 (323)
T ss_pred             CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCC----HHHHHHHHHHc
Confidence            8999999999998899999999999999999999999998765443332222221  12222233    44899999999


Q ss_pred             ccCCCCCC-----CHHHHHHHhh
Q 048684          282 NQTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       282 ~~dP~~RP-----t~~evl~~L~  299 (363)
                      +.||.+||     ++.+++++-.
T Consensus       236 ~~~p~~R~~~~~~~~~~l~~h~~  258 (323)
T cd05584         236 KRNPSSRLGAGPGDAAEVQSHPF  258 (323)
T ss_pred             ccCHhHcCCCCCCCHHHHhcCCC
Confidence            99999999     8888887543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.9e-29  Score=229.26  Aligned_cols=201  Identities=20%  Similarity=0.268  Sum_probs=146.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|+..++||+|+||+||++.. .+|+.||||.+.....  ......+.+|+.+++.++||||+++++++..++ .++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            477788999999999999984 5689999999865331  222356789999999999999999999877655 899999


Q ss_pred             ccCCCChhhhhhhcc---C------------------------------------CCCceeE--------------EEee
Q 048684          173 LSPHGSLASLLYAKW---L------------------------------------PDKWTHH--------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---~------------------------------------~~~~~~~--------------~~~~  199 (363)
                      |+++|+|.+++....   +                                    .......              ....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence            999999987763100   0                                    0000000              0122


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|++.|+|||++.+..++.++|||||||++|||++|+.||.+.......... ...+... ...++......+.+++..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~li~~  238 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV-ERRVKED-QEEYSEKFSEAARSICRQ  238 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHH-HHHhhhc-ccccCcccCHHHHHHHHH
Confidence            36889999999999889999999999999999999999999865432221111 1111111 111233344558999999


Q ss_pred             ccccCCCCCC-----CHHHHHHHhh
Q 048684          280 CINQTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RP-----t~~evl~~L~  299 (363)
                      ||+.||.+||     ++.+++++-.
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~  263 (285)
T cd05605         239 LLTKDPGFRLGCRGEGAEEVKAHPF  263 (285)
T ss_pred             HccCCHHHhcCCCCCCHHHHhcCcC
Confidence            9999999999     8888887643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.96  E-value=1.7e-28  Score=229.17  Aligned_cols=201  Identities=19%  Similarity=0.285  Sum_probs=148.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||+|+||.||++.. .+|..||+|.+...........+.+|++++.+++||||+++++++..++ .++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4688899999999999999984 5688999999876544445667899999999999999999999877665 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------CCC--CceeE-----------------------------EEeeccc
Q 048684          174 SPHGSLASLLYAKW--------------------LPD--KWTHH-----------------------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------~~~--~~~~~-----------------------------~~~~~~g  202 (363)
                      +++|+|.+++....                    +..  ...|.                             ......|
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG  160 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence            99999988874210                    000  00000                             0122357


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh---------------------------
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE---------------------------  255 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~---------------------------  255 (363)
                      ++.|+|||++.+..++.++|||||||++|+|+||+.||......... ..+..                           
T Consensus       161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (308)
T cd06615         161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI  239 (308)
T ss_pred             CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhH
Confidence            88999999998888999999999999999999999999754321111 00000                           


Q ss_pred             ------h---cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          256 ------L---VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       256 ------~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                            .   ..+..+   .......+.+++.+||..+|.+|||+.+|+++...
T Consensus       240 ~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~  290 (308)
T cd06615         240 FELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI  290 (308)
T ss_pred             HHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence                  0   001110   00123458899999999999999999999987543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.96  E-value=1.7e-28  Score=225.94  Aligned_cols=199  Identities=22%  Similarity=0.340  Sum_probs=146.8

Q ss_pred             CCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      +|...+.||.|+||.||+|...      .+..||||.+...........|..|+.++..++|||||++++++.... .++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4666788999999999999853      257899999986554444567899999999999999999999887655 889


Q ss_pred             EEEccCCCChhhhhhhccC-----------------------------------------------------CCCcee--
Q 048684          170 ILELSPHGSLASLLYAKWL-----------------------------------------------------PDKWTH--  194 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~-----------------------------------------------------~~~~~~--  194 (363)
                      ++||+++++|.+++.....                                                     ......  
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl  165 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI  165 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence            9999999999888631100                                                     000000  


Q ss_pred             ---------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          195 ---------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       195 ---------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                     .......+++.|+|||++.++.++.++|||||||++|||+| |..||.+.............. .
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~  244 (283)
T cd05091         166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ-V  244 (283)
T ss_pred             cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c
Confidence                           00011224678999999998899999999999999999998 888987654432222222221 1


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ...+..++    ..+.+++..||+.+|.+||++.+|+..|+.
T Consensus       245 ~~~~~~~~----~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         245 LPCPDDCP----AWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCCCCCCC----HHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            22223334    448999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.96  E-value=1.2e-28  Score=224.74  Aligned_cols=199  Identities=22%  Similarity=0.320  Sum_probs=149.0

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEcc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELS  174 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~  174 (363)
                      .++|.+.+.||+|+||+||+|...++..||+|.+......  ...|.+|+.++..++||||+++++++.+...++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC--HHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcC
Confidence            3568899999999999999998766667999999754332  35789999999999999999999988777789999999


Q ss_pred             CCCChhhhhhhcc---C------------------------------C------CCceeEE----------------Eee
Q 048684          175 PHGSLASLLYAKW---L------------------------------P------DKWTHHI----------------VSK  199 (363)
Q Consensus       175 ~~gsL~~~l~~~~---~------------------------------~------~~~~~~~----------------~~~  199 (363)
                      ++|+|.+++....   +                              +      ......+                ...
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~  162 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  162 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence            9999988874210   0                              0      0000000                001


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..++..|+|||+..+..++.++|||||||++|||+| |..||........... +.......    .....+..+.+++.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~l~~li~  237 (262)
T cd05071         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMP----CPPECPESLHDLMC  237 (262)
T ss_pred             CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH-HhcCCCCC----CccccCHHHHHHHH
Confidence            124567999999998899999999999999999999 8889976544332222 22211111    12334455899999


Q ss_pred             HccccCCCCCCCHHHHHHHhhc
Q 048684          279 ACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +||+.||.+||++.++++.|+.
T Consensus       238 ~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         238 QCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             HHccCCcccCCCHHHHHHHHHH
Confidence            9999999999999999998853

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=8.8e-29  Score=226.31  Aligned_cols=199  Identities=22%  Similarity=0.372  Sum_probs=144.6

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC-----
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG-----  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-----  165 (363)
                      .+++.|+..+.||+|+||.||+|.. .+++.||+|.+......  ...+.+|+.++.++ +||||+++++++...     
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc--HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            4567888999999999999999984 56889999998754322  45788999999998 699999999987642     


Q ss_pred             --CeEEEEEccCCCChhhhhhhcc---CC------------------------------------CCc---------ee-
Q 048684          166 --GMHLILELSPHGSLASLLYAKW---LP------------------------------------DKW---------TH-  194 (363)
Q Consensus       166 --~~~lv~E~~~~gsL~~~l~~~~---~~------------------------------------~~~---------~~-  194 (363)
                        ..++||||+++|+|.+++....   +.                                    ...         .. 
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence              2789999999999988765210   00                                    000         00 


Q ss_pred             -----EEEeecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          195 -----HIVSKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       195 -----~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                           .......|++.|+|||++.     +..++.++|||||||++|||++|+.||................ .+.+   
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~---  236 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-APRL---  236 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC-CCCC---
Confidence                 0011245888999999986     3468899999999999999999999997654332222211111 1111   


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ........+.+++.+||+.+|.+|||+.+++.+
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         237 KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            111233458999999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=5e-29  Score=226.84  Aligned_cols=199  Identities=23%  Similarity=0.352  Sum_probs=148.8

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .++|...+.||+|+||.||+|...+++.||||.+......  .+.|.+|+.++++++||||+++++++...+ .++||||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc--HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            4578889999999999999999777888999998754422  467899999999999999999999887665 8999999


Q ss_pred             cCCCChhhhhhhcc---CCC--------------------Ccee----------------EE-------------Eeecc
Q 048684          174 SPHGSLASLLYAKW---LPD--------------------KWTH----------------HI-------------VSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~~~--------------------~~~~----------------~~-------------~~~~~  201 (363)
                      +++|+|.+++....   ++.                    ...|                .+             .....
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  162 (261)
T cd05068          83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE  162 (261)
T ss_pred             ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC
Confidence            99999988874211   000                    0000                00             00011


Q ss_pred             c---ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          202 G---TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       202 g---t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      |   +..|+|||++.+..++.++|||||||++|||+| |+.||.+........ .+..........    .....+.+++
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~li  237 (261)
T cd05068         163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ-QVDQGYRMPCPP----GCPKELYDIM  237 (261)
T ss_pred             CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHHcCCCCCCCC----cCCHHHHHHH
Confidence            2   346999999998899999999999999999999 999998755433222 222222221222    2334589999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+||+.+|.+||++.+++..|+.
T Consensus       238 ~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         238 LDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHhhcCcccCCCHHHHHHHHhc
Confidence            99999999999999999998863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=3.3e-28  Score=225.14  Aligned_cols=203  Identities=22%  Similarity=0.394  Sum_probs=149.3

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      ...++|+..+.||+|+||.||++...      ....||+|.+...........+.+|+.++.++ +||||+++++++..+
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            34467888999999999999999853      23679999987655444456789999999999 799999999988766


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc-----------------------------------------------------CCCC
Q 048684          166 G-MHLILELSPHGSLASLLYAKW-----------------------------------------------------LPDK  191 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~-----------------------------------------------------~~~~  191 (363)
                      . .+++|||+++|+|.+++....                                                     +...
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~  168 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED  168 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence            5 899999999999988874210                                                     0000


Q ss_pred             ceeE-----------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          192 WTHH-----------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       192 ~~~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                      ....                 ......+++.|+|||++.+..++.++|||||||++|||++ |..||......... ..+
T Consensus       169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~  247 (293)
T cd05053         169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLL  247 (293)
T ss_pred             CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHH
Confidence            0000                 0001124567999999998999999999999999999998 99999765433222 222


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....+..+.    .....+.+|+.+||..||.+|||+.++++.|..
T Consensus       248 ~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         248 KEGYRMEKPQ----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             HcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence            2222222222    233458999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=240.48  Aligned_cols=196  Identities=22%  Similarity=0.369  Sum_probs=153.5

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      -|..++.||.|+||.||-++ ..+..+||||.+....  ..+....++.|+..|.+++|||+|.+-|++.... .|||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46777889999999999998 5778999999997543  3456788999999999999999999999877665 899999


Q ss_pred             ccCCCChhhhhhhc--------------------------------------cCCC-----------CceeEEEeecccc
Q 048684          173 LSPHGSLASLLYAK--------------------------------------WLPD-----------KWTHHIVSKIEGT  203 (363)
Q Consensus       173 ~~~~gsL~~~l~~~--------------------------------------~~~~-----------~~~~~~~~~~~gt  203 (363)
                      ||-| |-.|+|.-.                                      .+.+           ........+++||
T Consensus       107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT  185 (948)
T KOG0577|consen  107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT  185 (948)
T ss_pred             HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence            9975 766665300                                      0111           1111234567899


Q ss_pred             cCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          204 FGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       204 ~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      |.|||||++.   .+.|+-++|||||||+..||...++|+...+.....+. +...-.|.+.   ..+.+..+..++..|
T Consensus       186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH-IAQNesPtLq---s~eWS~~F~~Fvd~C  261 (948)
T KOG0577|consen  186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQNESPTLQ---SNEWSDYFRNFVDSC  261 (948)
T ss_pred             ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH-HHhcCCCCCC---CchhHHHHHHHHHHH
Confidence            9999999985   56899999999999999999999999987765444443 2333345553   456677799999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      |++-|.+|||..+++.+
T Consensus       262 LqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  262 LQKIPQERPTSEELLKH  278 (948)
T ss_pred             HhhCcccCCcHHHHhhc
Confidence            99999999999999875

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.96  E-value=1.5e-28  Score=224.24  Aligned_cols=202  Identities=24%  Similarity=0.404  Sum_probs=149.2

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||.|+||.||+|. ..+|..||||.+....  .......|.+|+.+++.++||||+++++++..++ .+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            468888999999999999998 4679999999886432  2234568899999999999999999999777655 88999


Q ss_pred             EccCCCChhhhhhhc-----cCC------------------------------------CCceeE---------------
Q 048684          172 ELSPHGSLASLLYAK-----WLP------------------------------------DKWTHH---------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-----~~~------------------------------------~~~~~~---------------  195 (363)
                      ||+++++|.+++...     .++                                    ......               
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence            999999998876410     000                                    000000               


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH-HHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM-WSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......|+..|+|||++.+..++.++|||||||++|+|++|..||......... ...+.....+..   ........+.
T Consensus       162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  238 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL---PSDHYSEELR  238 (267)
T ss_pred             ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC---CcccccHHHH
Confidence            011235888999999999889999999999999999999999999754332211 112222211211   1122344599


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +++.+||+.||.+|||+.+|++.+..
T Consensus       239 ~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         239 QLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             HHHHHhcCCCcccCCCHHHHHHHHhh
Confidence            99999999999999999999988753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=2.6e-28  Score=222.11  Aligned_cols=201  Identities=20%  Similarity=0.342  Sum_probs=150.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||.|+||+||+|.. .++..+|+|.+...........+.+|+.+++.++|+||+++++.+...+ .++||||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4788999999999999999984 5688999999976543335678999999999999999999999777665 8899999


Q ss_pred             cCCCChhhhhhhccC----C------------------------------------CCceeE------------------
Q 048684          174 SPHGSLASLLYAKWL----P------------------------------------DKWTHH------------------  195 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~----~------------------------------------~~~~~~------------------  195 (363)
                      +++++|.+++.....    +                                    ......                  
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence            999999888743110    0                                    000000                  


Q ss_pred             -EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCC-CHHHHHH
Q 048684          196 -IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAY-NTEQLTR  272 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  272 (363)
                       ......|+..|+|||++... .++.++|||||||++|+|++|+.||............... ..+.+.... ....+..
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  239 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKS  239 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHH
Confidence             01123578899999999877 7899999999999999999999999866544333333322 122222111 1234456


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHH
Q 048684          273 LLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+++..||+.||..|||+.+++.+
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         240 FRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhC
Confidence            8999999999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=5.2e-29  Score=233.17  Aligned_cols=203  Identities=24%  Similarity=0.370  Sum_probs=149.0

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMH  168 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~  168 (363)
                      ..+.|+.+++||+|+||.||+|+ ..+|+.||+|++..+. .++...-..+||.||++|+|||||+|.+...+.   .+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            34678889999999999999998 6889999999998665 344566678999999999999999999976654   499


Q ss_pred             EEEEccCCCChhhhhhhcc--------------------------------------CCCC----------------cee
Q 048684          169 LILELSPHGSLASLLYAKW--------------------------------------LPDK----------------WTH  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~----------------~~~  194 (363)
                      ||+|||++ +|..++....                                      +...                ...
T Consensus       195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence            99999998 7766654110                                      0000                000


Q ss_pred             EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC--------cCC---
Q 048684          195 HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP--------TLG---  262 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--------~~~---  262 (363)
                      ...+..+-|++|.|||++.+. .|+.++|+||.||||.||++|++.|.+.........+++-.-.|        .++   
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~  353 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT  353 (560)
T ss_pred             cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence            112334579999999999876 59999999999999999999999998865433332221111000        000   


Q ss_pred             -----CCC-------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 -----DAY-------NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 -----~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                           ..+       ........++|+..+|..||.+|.|+.+++..
T Consensus       354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence                 001       01234568899999999999999999999974

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=2.7e-28  Score=223.08  Aligned_cols=201  Identities=22%  Similarity=0.351  Sum_probs=149.8

Q ss_pred             CCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~  171 (363)
                      ++|...+.||+|+||.||+|...+    ...||||...........+.|.+|+.++..++||||+++++++.+...++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            457888999999999999998533    2469999987655444567899999999999999999999999888889999


Q ss_pred             EccCCCChhhhhhhcc--CCC------------------------------------CceeEE----------------E
Q 048684          172 ELSPHGSLASLLYAKW--LPD------------------------------------KWTHHI----------------V  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--~~~------------------------------------~~~~~~----------------~  197 (363)
                      ||+++|+|.+++....  +..                                    .....+                .
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  165 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA  165 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence            9999999998875211  000                                    000000                0


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....+++.|+|||.+....++.++|||||||++|||++ |..||........... +........+...    +..+.++
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~l  240 (270)
T cd05056         166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR-IENGERLPMPPNC----PPTLYSL  240 (270)
T ss_pred             CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHcCCcCCCCCCC----CHHHHHH
Confidence            01123457999999988889999999999999999996 9999977654333222 2222222222223    3459999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhhcC
Q 048684          277 ASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.+||..+|.+|||+.+++..|...
T Consensus       241 i~~~l~~~P~~Rpt~~~~~~~l~~~  265 (270)
T cd05056         241 MTKCWAYDPSKRPRFTELKAQLSDI  265 (270)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=1.3e-28  Score=236.30  Aligned_cols=201  Identities=15%  Similarity=0.182  Sum_probs=145.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||++.. .+|+.||||.+....  .......+.+|+.+|..++||||+++++++.+++ .++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3688999999999999999984 568999999986432  1223466889999999999999999999877666 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE-------------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH-------------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~-------------------  195 (363)
                      |||++|+|.+++....                                     +.......                   
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            9999999988764110                                     00000000                   


Q ss_pred             ---------------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhC
Q 048684          196 ---------------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG  236 (363)
Q Consensus       196 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG  236 (363)
                                                             ....++||+.|||||++.+..++.++|||||||++|||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence                                                   01134799999999999999999999999999999999999


Q ss_pred             CCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC---CHHHHHHHhh
Q 048684          237 RQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRP---QMSKVVQALR  299 (363)
Q Consensus       237 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---t~~evl~~L~  299 (363)
                      +.||.+...................+  ........+.+++.+|+ .+|.+|+   ++.+++++-.
T Consensus       241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~  303 (376)
T cd05598         241 QPPFLADTPAETQLKVINWETTLHIP--SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF  303 (376)
T ss_pred             CCCCCCCCHHHHHHHHhccCccccCC--CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence            99998765433322221111111111  11122334777777766 5999999   8999998644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=1.8e-28  Score=235.99  Aligned_cols=198  Identities=14%  Similarity=0.197  Sum_probs=143.4

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|+..++||+|+||+||+|.. .+++.||||.+....  .......+.+|+.+++.++|||||++++++.++. .++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            588889999999999999984 668999999986432  1233567889999999999999999999887666 899999


Q ss_pred             ccCCCChhhhhhhcc-------------------------------------CCCCceeE--------------------
Q 048684          173 LSPHGSLASLLYAKW-------------------------------------LPDKWTHH--------------------  195 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~--------------------  195 (363)
                      ||++|+|.+++....                                     +.......                    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence            999999988764110                                     00000000                    


Q ss_pred             ------------------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHH
Q 048684          196 ------------------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEI  233 (363)
Q Consensus       196 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el  233 (363)
                                                                ....++||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  241 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence                                                      01234699999999999999999999999999999999


Q ss_pred             HhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 048684          234 ITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ---MSKVVQA  297 (363)
Q Consensus       234 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~  297 (363)
                      ++|++||.....................+.  .......+.+++.+|+ .+|.+|++   +.+++++
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            999999987654333333222111111111  1122334667776665 59999987   8888875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-29  Score=240.69  Aligned_cols=201  Identities=23%  Similarity=0.376  Sum_probs=153.0

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEcC-CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CeEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~lv  170 (363)
                      -...+.....+||.|.||.||.|.|+. ...||||.++.+..+  .++|+.|+.+|+.++|||+|+|+|+|... .+|||
T Consensus       264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe--veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi  341 (1157)
T KOG4278|consen  264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII  341 (1157)
T ss_pred             ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh--HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence            333455666889999999999999754 678999999987765  68999999999999999999999988754 49999


Q ss_pred             EEccCCCChhhhhhhc----------------------------c-----------CCCCceeEEE--------------
Q 048684          171 LELSPHGSLASLLYAK----------------------------W-----------LPDKWTHHIV--------------  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~----------------------------~-----------~~~~~~~~~~--------------  197 (363)
                      +|||.+|+|.+||...                            +           ..+.....+.              
T Consensus       342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence            9999999999998611                            0           0111111000              


Q ss_pred             --eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          198 --SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       198 --~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                        ....-...|.|||.+....++.|+|||+|||+|||+.| |--||.+.+...+.     +.+........+..+...+.
T Consensus       422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-----~LLEkgyRM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----GLLEKGYRMDGPEGCPPKVY  496 (1157)
T ss_pred             cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-----HHHhccccccCCCCCCHHHH
Confidence              00012356999999999999999999999999999998 88999887655443     22222222233344445599


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +|+..||+.+|.+||++.++-+.++.
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFET  522 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHH
Confidence            99999999999999999999887763

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.96  E-value=8.6e-31  Score=231.06  Aligned_cols=196  Identities=19%  Similarity=0.290  Sum_probs=153.5

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCCeEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~~lv~E~~  174 (363)
                      -|++.++||+|+||.||++. ..+|++||||.+.-..   ..++++.|+.+|.+++.|+||++|| |+...++|||||||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            47777899999999999998 5779999999987543   4678999999999999999999999 67777899999999


Q ss_pred             CCCChhhhhhhccCCCCc---------------------------------------------------ee--EEEeecc
Q 048684          175 PHGSLASLLYAKWLPDKW---------------------------------------------------TH--HIVSKIE  201 (363)
Q Consensus       175 ~~gsL~~~l~~~~~~~~~---------------------------------------------------~~--~~~~~~~  201 (363)
                      -.|++.+++..+..+...                                                   +.  .--..+.
T Consensus       111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI  190 (502)
T KOG0574|consen  111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI  190 (502)
T ss_pred             CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence            999999988632211100                                                   00  0012356


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |||.|||||++..-.|+.++||||||++..||..|++||.+.......+.   -...|...-.-+...+..+.+++..||
T Consensus       191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---IPT~PPPTF~KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---IPTKPPPTFKKPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---ccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence            99999999999999999999999999999999999999976543221111   111121112235667888999999999


Q ss_pred             ccCCCCCCCHHHHHHHh
Q 048684          282 NQTSACRPQMSKVVQAL  298 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L  298 (363)
                      ...|++|-|+.+++++-
T Consensus       268 iK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEHT  284 (502)
T ss_pred             cCCHHHHHHHHHHhhhh
Confidence            99999999999999863

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-29  Score=242.22  Aligned_cols=196  Identities=23%  Similarity=0.374  Sum_probs=150.9

Q ss_pred             CCccCCcccccCceEEEEEEEc--CCc--EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE--DGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~--~g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      .....++||+|.||.|++|.|.  +|+  .||||++..+........|++|+.+|.+|+|||+|+|||...+....+|||
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~E  190 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFE  190 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhh
Confidence            3445678999999999999863  454  589999987765556789999999999999999999999999988999999


Q ss_pred             ccCCCChhhhhhhcc----------------------------C-----------CCCceeEE-----------------
Q 048684          173 LSPHGSLASLLYAKW----------------------------L-----------PDKWTHHI-----------------  196 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~----------------------------~-----------~~~~~~~~-----------------  196 (363)
                      .++.|+|.+.|+...                            +           ....+..|                 
T Consensus       191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv  270 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV  270 (1039)
T ss_pred             hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence            999999998886310                            0           00000000                 


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....-.+.|.|||.+....++.+||||+|||+||||+| |..||.+.....+...+     |..-.-.-++.++..+.
T Consensus       271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i-----D~~erLpRPk~csedIY  345 (1039)
T KOG0199|consen  271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI-----DAGERLPRPKYCSEDIY  345 (1039)
T ss_pred             ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc-----cccccCCCCCCChHHHH
Confidence             000113456999999999999999999999999999999 78999887765544332     22111223455677799


Q ss_pred             HHHHHccccCCCCCCCHHHHHHH
Q 048684          275 LIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +++..||..+|.+|||+..|...
T Consensus       346 ~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  346 QIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HHHHHhccCCccccccHHHHHHh
Confidence            99999999999999999999743

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=2e-28  Score=226.21  Aligned_cols=204  Identities=21%  Similarity=0.305  Sum_probs=148.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv~  171 (363)
                      ++|+..+.||.|+||.||+|.. .+++.||+|.+...........+.+|+++++.++||||+++++++.+.   .+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            4688889999999999999995 568999999997655444567899999999999999999999987543   378999


Q ss_pred             EccCCCChhhhhhhcc-----------------------------------------CCCCceeE-------------EE
Q 048684          172 ELSPHGSLASLLYAKW-----------------------------------------LPDKWTHH-------------IV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-----------------------------------------~~~~~~~~-------------~~  197 (363)
                      ||+++|+|.+++....                                         +.......             ..
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence            9999999987653100                                         00000000             01


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh----hHHHHHhhhhhcCCcCCCCCC--HHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK----SLVMWSSMKELVDPTLGDAYN--TEQLT  271 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~  271 (363)
                      ....++..|+|||.+.+..++.++|||||||++|+|++|..||.....    .......+.....+.+.....  .....
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE  240 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHH
Confidence            123478889999999999999999999999999999999999986521    111111111111111111111  12345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+.+++.+||..+|.+|||+.+++.+-.
T Consensus       241 ~~~~li~~~l~~~p~~Rpt~~eil~~~~  268 (287)
T cd06621         241 EFKDFIKQCLEKDPTRRPTPWDMLEHPW  268 (287)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence            6899999999999999999999998543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=1.9e-28  Score=226.79  Aligned_cols=200  Identities=21%  Similarity=0.334  Sum_probs=147.7

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      .+|...+.||+|+||.||+|...      ++..+|+|.+..... ...+.|.+|+.++.+++||||+++++++.... .+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            45788899999999999999742      356699999865443 23467899999999999999999999887766 89


Q ss_pred             EEEEccCCCChhhhhhhccC-----------------CC--------------------Ccee-----------------
Q 048684          169 LILELSPHGSLASLLYAKWL-----------------PD--------------------KWTH-----------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~-----------------~~--------------------~~~~-----------------  194 (363)
                      +||||+++|+|.+++.....                 +.                    ...|                 
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            99999999999888742110                 00                    0000                 


Q ss_pred             ----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          195 ----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       195 ----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                      .......|++.|+|||++.+..++.++|||||||++|||+| |+.||......... ..+....
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~-~~~~~~~  242 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI-ECITQGR  242 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHhCCC
Confidence                            00011235678999999999999999999999999999999 99998765443322 2222211


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+.....    .+..+.+++.+||+.+|.+|||+.+|++.|...
T Consensus       243 ~~~~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         243 VLERPRV----CPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             CCCCCcc----CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            1122222    334589999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.96  E-value=2e-28  Score=261.84  Aligned_cols=202  Identities=25%  Similarity=0.435  Sum_probs=150.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ...|...++||+|+||.||+|.. .+|..||||.+......     ...|+.++++++|||||+++|+|.+.. .++|||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            34577788999999999999985 67899999998643321     124688999999999999999988766 789999


Q ss_pred             ccCCCChhhhhhhc-----------------cCC----CCcee----------------EEE----------eecccccC
Q 048684          173 LSPHGSLASLLYAK-----------------WLP----DKWTH----------------HIV----------SKIEGTFG  205 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-----------------~~~----~~~~~----------------~~~----------~~~~gt~~  205 (363)
                      ||++|+|.+++..-                 ++.    ....|                .+.          ....||+.
T Consensus       764 y~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~  843 (968)
T PLN00113        764 YIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSA  843 (968)
T ss_pred             CCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCcccccc
Confidence            99999999887410                 011    00000                000          11246789


Q ss_pred             CCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch---hhHHHHHh-------hhhhcCCcCCC--CCCHHHHHHH
Q 048684          206 YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ---KSLVMWSS-------MKELVDPTLGD--AYNTEQLTRL  273 (363)
Q Consensus       206 y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~---~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~l  273 (363)
                      |||||++.+..++.++|||||||++|||+||+.||+...   .....|..       .....++.+..  ....+....+
T Consensus       844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  923 (968)
T PLN00113        844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV  923 (968)
T ss_pred             ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence            999999999999999999999999999999999986432   12223321       22334444422  2345566778


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+++.+||+.||.+||||.+|++.|+..
T Consensus       924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~  951 (968)
T PLN00113        924 MNLALHCTATDPTARPCANDVLKTLESA  951 (968)
T ss_pred             HHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence            9999999999999999999999998643

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.96  E-value=3.9e-28  Score=224.58  Aligned_cols=199  Identities=24%  Similarity=0.372  Sum_probs=148.4

Q ss_pred             CCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      +|++.+.||+|+||.||+|...      ....+|+|.+...........+.+|+.+++.++||||+++++++...+ .++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4778899999999999999742      235799999876655555678999999999999999999999877655 889


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------------------------------C
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------------------------------L  188 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------------------------------~  188 (363)
                      +|||+++|+|.+++....                                                             +
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            999999999988753210                                                             0


Q ss_pred             CCCceeEE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHH
Q 048684          189 PDKWTHHI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMW  250 (363)
Q Consensus       189 ~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~  250 (363)
                      .......+                 .....++..|+|||++.+..++.++|||||||++|||+| |..||.+..... .+
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~  239 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER-LF  239 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH-HH
Confidence            00000000                 001134668999999988899999999999999999999 999997654322 23


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ...........+...+    ..+.+++..||+.+|.+||++.++++.|+.
T Consensus       240 ~~~~~~~~~~~~~~~~----~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~  285 (290)
T cd05045         240 NLLKTGYRMERPENCS----EEMYNLMLTCWKQEPDKRPTFADISKELEK  285 (290)
T ss_pred             HHHhCCCCCCCCCCCC----HHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            3333322222233333    458999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.5e-28  Score=225.52  Aligned_cols=204  Identities=21%  Similarity=0.324  Sum_probs=144.1

Q ss_pred             CCCccCCcccccCceEEEEEEEcC---------------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED---------------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG  160 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~---------------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~  160 (363)
                      ++|++.+.||+|+||.||++....               ...||||.+...........|.+|++++.+++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            578889999999999999987432               23589999976554445668999999999999999999999


Q ss_pred             EEEcCC-eEEEEEccCCCChhhhhhhcc-------------------------------------------------CCC
Q 048684          161 YGVEGG-MHLILELSPHGSLASLLYAKW-------------------------------------------------LPD  190 (363)
Q Consensus       161 ~~~~~~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------------------~~~  190 (363)
                      ++.... .++||||+++++|.+++....                                                 +..
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~  164 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN  164 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence            887655 889999999999987763210                                                 000


Q ss_pred             CceeEE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh--CCCCCCCchhhHHHHH
Q 048684          191 KWTHHI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT--GRQALDSSQKSLVMWS  251 (363)
Q Consensus       191 ~~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt--G~~P~~~~~~~~~~~~  251 (363)
                      .....+                 .....+++.|+|||++.++.++.++|||||||++|||++  |..||...........
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~  244 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN  244 (295)
T ss_pred             CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence            000000                 011123568999999999999999999999999999998  6678875433222111


Q ss_pred             hhh--hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          252 SMK--ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       252 ~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...  ...........+...+..+.+|+.+||+.||.+|||+.+|++.|.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            100  000000000011112345999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=6.7e-28  Score=223.32  Aligned_cols=205  Identities=20%  Similarity=0.327  Sum_probs=147.7

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC-----------------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcce
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED-----------------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK  157 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~  157 (363)
                      ..+|++.+.||+|+||.||++....                 +..||+|.+...........|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3578999999999999999987432                 24689999986655555678999999999999999999


Q ss_pred             EEEEEEcCC-eEEEEEccCCCChhhhhhhcc------------CC-----------------------------------
Q 048684          158 MIGYGVEGG-MHLILELSPHGSLASLLYAKW------------LP-----------------------------------  189 (363)
Q Consensus       158 l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~------------~~-----------------------------------  189 (363)
                      +++++.... .+++|||+++++|.+++....            ++                                   
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            999887755 889999999999988764211            00                                   


Q ss_pred             -CCcee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh--CCCCCCCchhhHHH
Q 048684          190 -DKWTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT--GRQALDSSQKSLVM  249 (363)
Q Consensus       190 -~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt--G~~P~~~~~~~~~~  249 (363)
                       .....                 .......+++.|+|||++.+..++.++|||||||++|||++  |..||.........
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI  243 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence             00000                 00011234668999999998899999999999999999998  77888765433222


Q ss_pred             HHhhhhhc--CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          250 WSSMKELV--DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       250 ~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ........  ........+...+..+.+++.+||+.||.+|||+.+|++.|.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            22111100  000001112223355999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=1.8e-28  Score=224.33  Aligned_cols=201  Identities=21%  Similarity=0.385  Sum_probs=145.5

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc---------hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP---------EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG  166 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~---------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~  166 (363)
                      +|...+.||.|+||.||+|. ..+|+.||||.+.....         ....+.+.+|+.++..++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            46778899999999999998 45689999998753211         112356889999999999999999999887766


Q ss_pred             -eEEEEEccCCCChhhhhhhcc-C------------------------------------CCCceeE-------------
Q 048684          167 -MHLILELSPHGSLASLLYAKW-L------------------------------------PDKWTHH-------------  195 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~-~------------------------------------~~~~~~~-------------  195 (363)
                       .++||||+++|+|.+++.... +                                    .......             
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence             889999999999988764210 0                                    0000000             


Q ss_pred             ----EEeecccccCCCCchhhccCC--CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          196 ----IVSKIEGTFGYLPPEFFMHGI--ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       196 ----~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                          ......|+..|+|||++....  ++.++|||||||++|+|++|..||..................+.+........
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence                011235788899999997654  89999999999999999999999975543332222222222222222222334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...+.+++..||+.+|..|||+.+|+++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            5569999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.96  E-value=3e-28  Score=221.21  Aligned_cols=196  Identities=21%  Similarity=0.365  Sum_probs=146.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      .+|...+.||+|+||.||+|...++..+|+|.+......  ...|.+|+.++..++||||+++++++.... .++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM   81 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence            357788999999999999999777778999998654332  357889999999999999999999887665 78999999


Q ss_pred             CCCChhhhhhhcc--C------------------------------------CCCceeEEE-------------e---ec
Q 048684          175 PHGSLASLLYAKW--L------------------------------------PDKWTHHIV-------------S---KI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--~------------------------------------~~~~~~~~~-------------~---~~  200 (363)
                      ++++|.+++....  +                                    .......+.             .   ..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~  161 (256)
T cd05059          82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT  161 (256)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence            9999998874210  0                                    000000000             0   00


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.+..++.++|||||||++|||+| |+.||........ ...+.....+..+...+    ..+.+++.+
T Consensus       162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~li~~  236 (256)
T cd05059         162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-VESVSAGYRLYRPKLAP----TEVYTIMYS  236 (256)
T ss_pred             CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-HHHHHcCCcCCCCCCCC----HHHHHHHHH
Confidence            12346999999999999999999999999999999 8999976543322 22233322222223333    459999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||+.+|.+|||+.++++.|
T Consensus       237 cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         237 CWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HhcCChhhCcCHHHHHHHh
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.96  E-value=4.1e-28  Score=223.08  Aligned_cols=199  Identities=22%  Similarity=0.405  Sum_probs=148.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|+..+.||+|+||+||+|.+ .+|.    .||||.+...........+.+|+.++..++||||+++++++.....+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            5788889999999999999984 4555    4899999765555556789999999999999999999999988888999


Q ss_pred             EEccCCCChhhhhhhcc--CCC--------------------Ccee----------------EE----------------
Q 048684          171 LELSPHGSLASLLYAKW--LPD--------------------KWTH----------------HI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~~~--------------------~~~~----------------~~----------------  196 (363)
                      +||+++|+|.+++....  ++.                    ...|                .+                
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~  166 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY  166 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccccee
Confidence            99999999988875210  000                    0000                00                


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....+++.|+|||.+.+..++.++|||||||++|||++ |..||......... ..+.....+......    ...+.
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~  241 (279)
T cd05109         167 HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLEKGERLPQPPIC----TIDVY  241 (279)
T ss_pred             ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCcCCCCccC----CHHHH
Confidence             001123567999999998899999999999999999998 99999765433222 122222222222223    34588


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhh
Q 048684          275 LIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +++..||+.||..||++.+++..|.
T Consensus       242 ~li~~~l~~dp~~Rp~~~~l~~~l~  266 (279)
T cd05109         242 MIMVKCWMIDSECRPRFRELVDEFS  266 (279)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999999999998774

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=2.5e-28  Score=233.40  Aligned_cols=201  Identities=22%  Similarity=0.276  Sum_probs=142.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||+||++.. .+|+.||||++....  .......+..|+.++..++||||+++++++.+.. .|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4788999999999999999984 568999999996432  1223457889999999999999999999887665 89999


Q ss_pred             EccCCCChhhhhhhc-------------------------------------cCCCCcee--------------------
Q 048684          172 ELSPHGSLASLLYAK-------------------------------------WLPDKWTH--------------------  194 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------------~~~~~~~~--------------------  194 (363)
                      |||++|+|.+++...                                     .+......                    
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            999999998877410                                     00000000                    


Q ss_pred             ------------------------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch
Q 048684          195 ------------------------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ  244 (363)
Q Consensus       195 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~  244 (363)
                                                    ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence                                          00123579999999999999999999999999999999999999998765


Q ss_pred             hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH--ccccCCCCCCCHHHHHHHh
Q 048684          245 KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA--CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPt~~evl~~L  298 (363)
                      ................++...  .....+.+++.+  |...++..||++.+++++-
T Consensus       241 ~~~~~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp  294 (363)
T cd05628         241 PQETYKKVMNWKETLIFPPEV--PISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP  294 (363)
T ss_pred             HHHHHHHHHcCcCcccCCCcC--CCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence            443332222211111111111  122336666665  3334455679999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=3.7e-28  Score=221.86  Aligned_cols=201  Identities=23%  Similarity=0.365  Sum_probs=147.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      .++|...+.||+|+||.||+|... ++   ..+|||.+...........+.+|+.++..++||||+++++++...+ .++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            357888899999999999999853 33   3799999876544444678999999999999999999999887655 899


Q ss_pred             EEEccCCCChhhhhhhcc--CCC------------------------------------CceeEEE--------------
Q 048684          170 ILELSPHGSLASLLYAKW--LPD------------------------------------KWTHHIV--------------  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~--~~~------------------------------------~~~~~~~--------------  197 (363)
                      ||||+++|+|.+++....  ++.                                    .....+.              
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  163 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG  163 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence            999999999988874211  000                                    0000000              


Q ss_pred             ----eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          198 ----SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       198 ----~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                          .....++.|+|||++....++.++|||||||++|||++ |+.||..................+.     .......
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~  238 (268)
T cd05063         164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA-----PMDCPSA  238 (268)
T ss_pred             ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC-----CCCCCHH
Confidence                00012346999999998899999999999999999998 9999976544332222221111111     1123345


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+++.+||+.+|..||++.+|++.|..
T Consensus       239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         239 VYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            8999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=2.6e-28  Score=225.65  Aligned_cols=202  Identities=21%  Similarity=0.344  Sum_probs=148.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .+++|.+.+.||+|+||.||+|...      .+..||+|.+...........+.+|+.++..++||||+++++++..+. 
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4578999999999999999999743      245799999875543334557889999999999999999999877665 


Q ss_pred             eEEEEEccCCCChhhhhhhccC-----------------------------------------------CCCceeEE---
Q 048684          167 MHLILELSPHGSLASLLYAKWL-----------------------------------------------PDKWTHHI---  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------~~~~~~~~---  196 (363)
                      .++||||+++|+|.+++.....                                               .......+   
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Df  163 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF  163 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcC
Confidence            8999999999999988852100                                               00000000   


Q ss_pred             --------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcC
Q 048684          197 --------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       197 --------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                                    .....++..|+|||++.++.++.++|||||||++|||++ |..||.+............... +..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~~~  242 (288)
T cd05061         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQ  242 (288)
T ss_pred             CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCC
Confidence                          001123567999999999999999999999999999999 7889976554332222221111 111


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +...    ...+.+++.+||+.||.+|||+.++++.|..
T Consensus       243 ~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  277 (288)
T cd05061         243 PDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKD  277 (288)
T ss_pred             CCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            2222    3459999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=4.1e-29  Score=228.97  Aligned_cols=198  Identities=19%  Similarity=0.259  Sum_probs=156.2

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +.|...+.||.|.-|+||++.+. ++..+|+|++.+...  .....+...|-+||..++||.++.||+.+.... .|++|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            46788899999999999999964 468999999986542  234567778999999999999999999877766 89999


Q ss_pred             EccCCCChhhhhh-------------------------------------------------------------------
Q 048684          172 ELSPHGSLASLLY-------------------------------------------------------------------  184 (363)
Q Consensus       172 E~~~~gsL~~~l~-------------------------------------------------------------------  184 (363)
                      |||+||+|..+.+                                                                   
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence            9999999987764                                                                   


Q ss_pred             -hcc----------------------CCC-C-------------------ceeEEEeecccccCCCCchhhccCCCCccc
Q 048684          185 -AKW----------------------LPD-K-------------------WTHHIVSKIEGTFGYLPPEFFMHGIADEKT  221 (363)
Q Consensus       185 -~~~----------------------~~~-~-------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~s  221 (363)
                       ...                      ... .                   ........++||-.|+|||++.+...+.++
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV  316 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV  316 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence             000                      000 0                   000112345799999999999999999999


Q ss_pred             eEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC----HHHHHHH
Q 048684          222 DVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ----MSKVVQA  297 (363)
Q Consensus       222 DvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~evl~~  297 (363)
                      |+|+|||+||||+.|..||.+.+.......++...+  .++.  .+..+..+.+||.+.|.+||.+|..    +.||-++
T Consensus       317 DWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l--~Fp~--~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  317 DWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL--KFPE--EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             hHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC--cCCC--CCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence            999999999999999999999988877766665433  2222  2245567999999999999999998    8888764

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.96  E-value=1.1e-28  Score=226.65  Aligned_cols=196  Identities=24%  Similarity=0.395  Sum_probs=147.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      -|+..+.||.|+||.||+|.. .++..||||.+...........+.+|+.++.+++||||+++++++..+. .++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            467778999999999999985 5689999999875544444578899999999999999999999887766 88999999


Q ss_pred             CCCChhhhhhhccCCC------------------------------------CceeEE---------------Eeecccc
Q 048684          175 PHGSLASLLYAKWLPD------------------------------------KWTHHI---------------VSKIEGT  203 (363)
Q Consensus       175 ~~gsL~~~l~~~~~~~------------------------------------~~~~~~---------------~~~~~gt  203 (363)
                      ++|+|.+++....++.                                    .....+               .....|+
T Consensus        85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  164 (277)
T cd06641          85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT  164 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCC
Confidence            9999988774211000                                    000000               0112478


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      ..|+|||++.+..++.++|||||||++|+|++|..||........... +.....+.+....+    ..+.+++..||+.
T Consensus       165 ~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~i~~~l~~  239 (277)
T cd06641         165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL-IPKNNPPTLEGNYS----KPLKEFVEACLNK  239 (277)
T ss_pred             ccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH-HhcCCCCCCCcccC----HHHHHHHHHHccC
Confidence            889999999888899999999999999999999999976543322222 22222222333333    4488999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 048684          284 TSACRPQMSKVVQA  297 (363)
Q Consensus       284 dP~~RPt~~evl~~  297 (363)
                      +|..||++.+++.+
T Consensus       240 ~p~~Rp~~~~~l~~  253 (277)
T cd06641         240 EPSFRPTAKELLKH  253 (277)
T ss_pred             ChhhCcCHHHHHhC
Confidence            99999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=1.3e-28  Score=224.82  Aligned_cols=200  Identities=19%  Similarity=0.285  Sum_probs=144.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||+|+||.||+|.. .+|+.||+|.+...... ....+.+|+.++.+++||||+++++++...+ .++||||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            5799999999999999999984 67899999998754332 2456889999999999999999999877665 7899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCCCc---------eeEE------Eeecc
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPDKW---------THHI------VSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~~~---------~~~~------~~~~~  201 (363)
                      +++|+|.+++....                                     +....         ....      .....
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI  167 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence            99999988764110                                     00000         0000      01234


Q ss_pred             cccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-CCcCCCCCCHHHHHHHHHHH
Q 048684          202 GTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-DPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       202 gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li  277 (363)
                      |++.|+|||.+.   ...++.++|||||||++|||++|+.||................. .+.+..  ....+..+.+++
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li  245 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKD--KTKWSSTFHNFV  245 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcc--ccccCHHHHHHH
Confidence            788999999984   34578999999999999999999999865432211111111111 111111  112345689999


Q ss_pred             HHccccCCCCCCCHHHHHHHh
Q 048684          278 SACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..||+.+|.+|||+.++++.|
T Consensus       246 ~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         246 KISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHhhCChhhCcCHHHHhcCC
Confidence            999999999999999999765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=5.2e-28  Score=220.96  Aligned_cols=200  Identities=24%  Similarity=0.346  Sum_probs=146.9

Q ss_pred             CCCccCCcccccCceEEEEEEEc-C---CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-D---GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~---g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|... +   +..+|+|.+...........|.+|+.++..++||||+++++++..++ .++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            46888899999999999999842 2   34799999876554445678999999999999999999999887655 8899


Q ss_pred             EEccCCCChhhhhhhccC--------------------------------------CCCceeEE----------------
Q 048684          171 LELSPHGSLASLLYAKWL--------------------------------------PDKWTHHI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~--------------------------------------~~~~~~~~----------------  196 (363)
                      |||+++|+|.+++.....                                      .......+                
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  163 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence            999999999888742100                                      00000000                


Q ss_pred             --EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 --VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 --~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                        .....++..|+|||++.+..++.++|||||||++||+++ |..||......... ..+.....+......    +..+
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~  238 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI-KAIEEGYRLPAPMDC----PAAL  238 (267)
T ss_pred             eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH-HHHhCCCcCCCCCCC----CHHH
Confidence              001112457999999998899999999999999999887 99999765433222 222222222222223    3448


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+++.+||+.+|..||++.++++.|..
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         239 HQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             HHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            899999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=8.2e-28  Score=219.73  Aligned_cols=198  Identities=24%  Similarity=0.370  Sum_probs=144.1

Q ss_pred             CccCCcccccCceEEEEEEEc-C---CcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           98 FSHENLIGQGGYAEVYKGQLE-D---GQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~-~---g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      |.+.+.||+|+||.||+|... +   +..||||.+.... .......+.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            567789999999999999853 2   3679999987543 2334568999999999999999999999775433      


Q ss_pred             -eEEEEEccCCCChhhhhhhccCC-------------------------------------------CCceeEE-----E
Q 048684          167 -MHLILELSPHGSLASLLYAKWLP-------------------------------------------DKWTHHI-----V  197 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~~-------------------------------------------~~~~~~~-----~  197 (363)
                       .+++|||+++|+|..++......                                           ......+     .
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             58999999999998776321100                                           0000000     0


Q ss_pred             ------------eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          198 ------------SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       198 ------------~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                                  ....++..|+|||++.+..++.++|||||||++|||++ |..||.+......... +.....+..+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~  239 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY-LRHGNRLKQPED  239 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCcC
Confidence                        00124567999999988899999999999999999999 8899976554333222 222222222222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                          ....+.+++.+||+.||.+|||+.+++..|..
T Consensus       240 ----~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         240 ----CLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             ----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence                34459999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=1.8e-28  Score=226.85  Aligned_cols=201  Identities=19%  Similarity=0.250  Sum_probs=143.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||.|+||+||+|.. .++..||+|.+...........+.+|+.+++.++||||+++++++.... .++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            5689999999999999999985 5689999999875443333457889999999999999999999877665 7899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCceeE---------------EEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------IVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------~~~~~  200 (363)
                      +++ +|.+++....                                      +.......               .....
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~  163 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNE  163 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCc
Confidence            985 8877653110                                      00000000               01123


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--------------------cCC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--------------------VDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--------------------~~~  259 (363)
                      .||+.|+|||++.+ ..++.++|||||||++|||+||++||.+..............                    ..+
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T cd07871         164 VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFP  243 (288)
T ss_pred             eecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccC
Confidence            57889999999875 568999999999999999999999997654332221111100                    000


Q ss_pred             cCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....    ........+.+++.+||+.||.+|||+.|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         244 QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00000    001123458899999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=9.8e-29  Score=229.57  Aligned_cols=199  Identities=18%  Similarity=0.283  Sum_probs=149.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..+|...+.||+|+||.||+|.. .+|+.||+|.+....... ...+.+|+.++..++||||+++++++..+. .++|||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            35788899999999999999984 568999999987654433 467889999999999999999999777655 899999


Q ss_pred             ccCCCChhhhhhhccC------------------------------------CCCceeE---------------EEeecc
Q 048684          173 LSPHGSLASLLYAKWL------------------------------------PDKWTHH---------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~------------------------------------~~~~~~~---------------~~~~~~  201 (363)
                      |+++|+|.+++....+                                    .......               ......
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~  177 (296)
T cd06654          98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (296)
T ss_pred             ccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCccc
Confidence            9999999887642110                                    0000000               011235


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |++.|+|||++.+..++.++|||||||++|+|++|+.||................ .+.+  ..+......+.+++.+||
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~li~~~l  254 (296)
T cd06654         178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPEL--QNPEKLSAIFRDFLNRCL  254 (296)
T ss_pred             CCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC-CCCC--CCccccCHHHHHHHHHHC
Confidence            8889999999998889999999999999999999999997654322221111111 1111  122334455899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      ..+|..|||+.+++++
T Consensus       255 ~~~p~~Rpt~~eil~~  270 (296)
T cd06654         255 DMDVEKRGSAKELLQH  270 (296)
T ss_pred             cCCcccCcCHHHHhhC
Confidence            9999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-30  Score=222.54  Aligned_cols=203  Identities=18%  Similarity=0.214  Sum_probs=158.7

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CeEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~lv~  171 (363)
                      ++.|++.++||+|.|+.||++. ..+|+.+|+|+++... .....+.+.+|+.|.+.|+|||||+|+....+. -.|+|+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            4678888899999999999997 6789999999986433 223467888999999999999999999855544 489999


Q ss_pred             EccCCCChhhhhhhc-------------------------------cCCC-------------C-----c-----eeEEE
Q 048684          172 ELSPHGSLASLLYAK-------------------------------WLPD-------------K-----W-----THHIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------~~~~-------------~-----~-----~~~~~  197 (363)
                      |+|.||+|..-|-.+                               ..|.             +     .     .....
T Consensus        90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence            999999986543200                               0000             0     0     01123


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+|||+|||||++...+|+..+|||+.|||||-|+.|.+||.+.+......++....+|-.  ...++..+.+..+|+
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~--~~~w~~is~~Ak~Lv  247 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP--SPEWDTVTPEAKSLI  247 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC--CcccCcCCHHHHHHH
Confidence            345799999999999999999999999999999999999999999877777767666655432  223444556699999


Q ss_pred             HHccccCCCCCCCHHHHHHHhh
Q 048684          278 SACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+||..||.+|.|+.|.+++-+
T Consensus       248 rrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             HHHhccChhhhccHHHHhCCch
Confidence            9999999999999999997544

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.96  E-value=4.8e-28  Score=223.65  Aligned_cols=200  Identities=26%  Similarity=0.418  Sum_probs=148.2

Q ss_pred             cCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .++|+..+.||.|+||.||++...      ++..||+|.+...........|.+|+.++++++||||+++++++..+. .
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467899999999999999999853      467899999876554444577999999999999999999999887665 8


Q ss_pred             EEEEEccCCCChhhhhhhccCC-------------------------------------------CCceeE---------
Q 048684          168 HLILELSPHGSLASLLYAKWLP-------------------------------------------DKWTHH---------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~-------------------------------------------~~~~~~---------  195 (363)
                      ++||||+++|+|.+++......                                           ....|.         
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~  163 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV  163 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence            9999999999998887421100                                           000000         


Q ss_pred             -------E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHH
Q 048684          196 -------I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMW  250 (363)
Q Consensus       196 -------~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~  250 (363)
                             +                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+........
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~  243 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY  243 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                   0                 000113456999999998999999999999999999998 888987654333222


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ....... ...+..    ....+.+++.+||+.||.+|||+.|+++.|+
T Consensus       244 ~~~~~~~-~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         244 YVRDGNV-LSCPDN----CPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHhcCCC-CCCCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            2111111 111222    3345999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.96  E-value=3.5e-28  Score=222.07  Aligned_cols=202  Identities=21%  Similarity=0.369  Sum_probs=149.1

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++.+++++.....||+|+||.||+|.. .++..||+|.+...... ..+.+.+|+.++..++|+||+++++++..++ .+
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR-YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH-HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            345667777778999999999999984 56788999998755433 3568999999999999999999999888766 78


Q ss_pred             EEEEccCCCChhhhhhhccCCC-----------------------------------------CceeEE-----------
Q 048684          169 LILELSPHGSLASLLYAKWLPD-----------------------------------------KWTHHI-----------  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~~~-----------------------------------------~~~~~~-----------  196 (363)
                      +|+||+++++|.+++.....+.                                         .....+           
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG  161 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence            9999999999998875321100                                         000000           


Q ss_pred             ----EeecccccCCCCchhhccCC--CCccceEEechhHHHHHHhCCCCCCCchhh-HHHHHhhhhhcCCcCCCCCCHHH
Q 048684          197 ----VSKIEGTFGYLPPEFFMHGI--ADEKTDVYAYGVLLLEIITGRQALDSSQKS-LVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       197 ----~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                          .....|++.|+|||++....  ++.++|||||||++|+|++|+.||...... ...+........+.++.    ..
T Consensus       162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~  237 (268)
T cd06624         162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE----SL  237 (268)
T ss_pred             CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCc----cc
Confidence                01124788999999986654  889999999999999999999999754322 22222211112222322    23


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...+.+++.+||+.+|.+|||+.+++.+
T Consensus       238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         238 SAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            3458999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=4.3e-28  Score=220.64  Aligned_cols=198  Identities=23%  Similarity=0.324  Sum_probs=148.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSP  175 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~  175 (363)
                      ++|.+...||+|+||.||+|...++..||+|.+.....  ....|.+|+.+++.++||||+++++++.....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCC
Confidence            46888899999999999999977667799998865432  2467889999999999999999999887777899999999


Q ss_pred             CCChhhhhhhcc---C------------------------------------CCCceeEE----------------Eeec
Q 048684          176 HGSLASLLYAKW---L------------------------------------PDKWTHHI----------------VSKI  200 (363)
Q Consensus       176 ~gsL~~~l~~~~---~------------------------------------~~~~~~~~----------------~~~~  200 (363)
                      +|+|.+++....   +                                    .......+                ....
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence            999988874210   0                                    00000000                0011


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||+..+..++.++|||||||++|||+| |..||.+....... ..+.....+..    +...+..+.+++.+
T Consensus       164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~li~~  238 (260)
T cd05069         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL-EQVERGYRMPC----PQGCPESLHELMKL  238 (260)
T ss_pred             ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCC----CcccCHHHHHHHHH
Confidence            24567999999998899999999999999999999 89999875443322 22222222222    22334559999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||+.||.+||++.+|++.|+.
T Consensus       239 ~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         239 CWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HccCCcccCcCHHHHHHHHhc
Confidence            999999999999999998853

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=1.4e-28  Score=228.50  Aligned_cols=201  Identities=21%  Similarity=0.370  Sum_probs=147.2

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCc--EEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...++||+|+||.||+|... +|.  .+|+|.+.........+.|.+|+.++.++ +||||+++++++.... .+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            57888899999999999999853 343  47899887544444457899999999999 7999999999887665 8999


Q ss_pred             EEccCCCChhhhhhhccC-----------------------------------------------------CCCceeEEE
Q 048684          171 LELSPHGSLASLLYAKWL-----------------------------------------------------PDKWTHHIV  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~-----------------------------------------------------~~~~~~~~~  197 (363)
                      |||+++|+|.+++.....                                                     .......+.
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence            999999999887742110                                                     000000000


Q ss_pred             ------------ee--cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          198 ------------SK--IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       198 ------------~~--~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                  ..  ...+..|+|||++....++.++|||||||++|||+| |..||........... +.....+..+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~-~~~~~~~~~~  240 (297)
T cd05089         162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEK-LPQGYRMEKP  240 (297)
T ss_pred             CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhcCCCCCCC
Confidence                        00  012446999999998899999999999999999998 9999977654332222 2222222222


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ...+    ..+.+|+.+||+.+|.+|||+.++++.|...
T Consensus       241 ~~~~----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         241 RNCD----DEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            2333    4489999999999999999999999888543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.96  E-value=6.6e-28  Score=222.01  Aligned_cols=198  Identities=20%  Similarity=0.355  Sum_probs=145.9

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      .+|+..++||+|+||.||++...      ++..+|+|.+.... ......|.+|+.++..++||||+++++++.... .+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            46777899999999999999632      35689999887544 334568999999999999999999999888766 88


Q ss_pred             EEEEccCCCChhhhhhhcc----------------C------------------------------------CCCceeEE
Q 048684          169 LILELSPHGSLASLLYAKW----------------L------------------------------------PDKWTHHI  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~----------------~------------------------------------~~~~~~~~  196 (363)
                      ++|||+++|+|.+++....                +                                    .......+
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL  163 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKI  163 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEE
Confidence            9999999999987764210                0                                    00000000


Q ss_pred             -----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          197 -----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       197 -----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                       .....+++.|+|||++.+..++.++|||||||++|||++ |.+||............... ..
T Consensus       164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~  242 (280)
T cd05092         164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-RE  242 (280)
T ss_pred             CCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC-cc
Confidence                             001123567999999999999999999999999999998 99999765433322222221 12


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +..+...+    ..+.+++.+||+.||.+||++.+|+..|+
T Consensus       243 ~~~~~~~~----~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         243 LERPRTCP----PEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             CCCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            22222333    34889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.8e-28  Score=230.16  Aligned_cols=186  Identities=22%  Similarity=0.309  Sum_probs=138.0

Q ss_pred             CcccccCceEEEEEEE----cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684          102 NLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      +.||+|+||.||++..    .+|+.||+|.+..... ......+..|+.++.+++||||+++++++..++ .|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999874    3588999999975321 122456788999999999999999999887665 899999999


Q ss_pred             CCChhhhhhhcc-------------------------------------CCCCcee---------------EEEeecccc
Q 048684          176 HGSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGT  203 (363)
Q Consensus       176 ~gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt  203 (363)
                      +|+|.+++....                                     +......               ......+||
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~  161 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT  161 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCC
Confidence            999988764110                                     0000000               012235689


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      +.|+|||++.+..++.++|||||||++|||+||+.||.................  .++...+    ..+.+++.+||+.
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~--~~p~~~~----~~~~~li~~~l~~  235 (318)
T cd05582         162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--GMPQFLS----PEAQSLLRALFKR  235 (318)
T ss_pred             hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--CCCCCCC----HHHHHHHHHHhhc
Confidence            999999999988999999999999999999999999987654433333222211  1222233    4488999999999


Q ss_pred             CCCCCCCHHH
Q 048684          284 TSACRPQMSK  293 (363)
Q Consensus       284 dP~~RPt~~e  293 (363)
                      ||.+||++.+
T Consensus       236 ~P~~R~~a~~  245 (318)
T cd05582         236 NPANRLGAGP  245 (318)
T ss_pred             CHhHcCCCCC
Confidence            9999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.96  E-value=8.4e-28  Score=218.01  Aligned_cols=194  Identities=23%  Similarity=0.367  Sum_probs=143.8

Q ss_pred             CcccccCceEEEEEEEcC--Cc--EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQLED--GQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~--g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~g  177 (363)
                      ++||+|+||.||+|.+.+  +.  .||||.+.........+.|.+|+.++.+++||||+++++++.....++||||+++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            468999999999998532  33  69999998765534567899999999999999999999988776689999999999


Q ss_pred             Chhhhhhhcc---CCC--------------------Ccee----------------E------------------EEeec
Q 048684          178 SLASLLYAKW---LPD--------------------KWTH----------------H------------------IVSKI  200 (363)
Q Consensus       178 sL~~~l~~~~---~~~--------------------~~~~----------------~------------------~~~~~  200 (363)
                      +|.+++....   ++.                    ...|                .                  .....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL  160 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCC
Confidence            9998774211   000                    0000                0                  00012


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.+..++.++|||||||++|||+| |..||.....................    +...+..+.+++..
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~  236 (257)
T cd05040         161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLER----PEACPQDIYNVMLQ  236 (257)
T ss_pred             CCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCC----CccCCHHHHHHHHH
Confidence            36678999999998899999999999999999999 99999765443322222211111111    12233459999999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      ||+.+|.+|||+.++++.|.
T Consensus       237 ~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         237 CWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HCCCCcccCCCHHHHHHHhc
Confidence            99999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.96  E-value=2e-28  Score=228.25  Aligned_cols=200  Identities=23%  Similarity=0.421  Sum_probs=145.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc--EEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|+..+.||+|+||.||+|.. .+|.  .+|+|.+...........|.+|+.++.++ +||||+++++++...+ .++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            5788889999999999999985 4454  46888876544444467889999999999 8999999999887666 8999


Q ss_pred             EEccCCCChhhhhhhccC-----------------CC--------------------CceeE------E---------Ee
Q 048684          171 LELSPHGSLASLLYAKWL-----------------PD--------------------KWTHH------I---------VS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~-----------------~~--------------------~~~~~------~---------~~  198 (363)
                      |||+++|+|.+++.....                 +.                    ...|.      +         +.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~  166 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  166 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence            999999999887742110                 00                    00000      0         00


Q ss_pred             -------------e--cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          199 -------------K--IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       199 -------------~--~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                   .  ..+++.|+|||++.+..++.++|||||||++|||+| |..||......... ..+.....+..+
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~~~~~~~~~  245 (303)
T cd05088         167 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-EKLPQGYRLEKP  245 (303)
T ss_pred             ccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-HHHhcCCcCCCC
Confidence                         0  112457999999988889999999999999999998 99999765433222 112221111112


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..    ....+.+++.+||+.+|..||++.+++..|..
T Consensus       246 ~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         246 LN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            22    23458999999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.96  E-value=1.5e-28  Score=225.27  Aligned_cols=200  Identities=24%  Similarity=0.421  Sum_probs=147.7

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|+....||.|+||+||+|...      +...||+|.+...........|.+|+.++.+++||||+++++++.+.. .+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57888899999999999999853      246799999876544435678999999999999999999999887755 89


Q ss_pred             EEEEccCCCChhhhhhhcc----------CCCC--------------------cee----------------EE------
Q 048684          169 LILELSPHGSLASLLYAKW----------LPDK--------------------WTH----------------HI------  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~----------~~~~--------------------~~~----------------~~------  196 (363)
                      +||||+++|+|.+++....          ++..                    ..|                .+      
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence            9999999999998875221          0000                    000                00      


Q ss_pred             ----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCC
Q 048684          197 ----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAY  265 (363)
Q Consensus       197 ----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (363)
                                .....++..|+|||.+.+..++.++|||||||++|+|++ |..||........................+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGC  244 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCC
Confidence                      011234567999999988889999999999999999999 888997544332222221111111112223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +    ..+.+++.+||+.+|.+|||+.+++..|.
T Consensus       245 ~----~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         245 P----SRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             C----HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            3    35999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=5.3e-28  Score=228.11  Aligned_cols=192  Identities=18%  Similarity=0.255  Sum_probs=139.6

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||++.. .+++.||||.+....  .......+..|+.++..+ +||||+++++++.... .++|||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999985 568999999997532  223356688999999998 6999999999887666 8999999999


Q ss_pred             CChhhhhhhc-c------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAK-W------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~-~------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|.+++... .                                    +.....               .......+||+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence            9998776310 0                                    000000               00122356899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh--------hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK--------SLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      .|+|||++.+..++.++|||||||++|||+||+.||.....        .......+... ...++...+    ..+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~----~~~~~l  235 (329)
T cd05588         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-QIRIPRSLS----VKASSV  235 (329)
T ss_pred             cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC-CCCCCCCCC----HHHHHH
Confidence            99999999999999999999999999999999999963211        11111111111 122223333    348899


Q ss_pred             HHHccccCCCCCCC------HHHHHHHh
Q 048684          277 ASACINQTSACRPQ------MSKVVQAL  298 (363)
Q Consensus       277 i~~cl~~dP~~RPt------~~evl~~L  298 (363)
                      +.+||+.||.+||+      +.+++++-
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~~~i~~hp  263 (329)
T cd05588         236 LKGFLNKDPKERLGCHPQTGFRDIKSHP  263 (329)
T ss_pred             HHHHhccCHHHcCCCCCCCCHHHHhcCC
Confidence            99999999999997      67887653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=3e-28  Score=228.72  Aligned_cols=191  Identities=16%  Similarity=0.254  Sum_probs=141.7

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||+|.. .+++.||||.+....  .......+..|+.++..+ +||||+++++++...+ .++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999985 458899999997532  223356678899999888 6999999999877666 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCcee---------------EEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~  204 (363)
                      |+|..++....                                     +......               ......+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence            99987664110                                     0000000               0112346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...............  .+..+...    ...+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~----~~~~~~li~~~l~~d  234 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVRYPRWL----SKEAKSILKSFLTKN  234 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcC----CHHHHHHHHHHccCC
Confidence            999999999999999999999999999999999999866543332222211  12222223    345899999999999


Q ss_pred             CCCCCCH-----HHHHHHh
Q 048684          285 SACRPQM-----SKVVQAL  298 (363)
Q Consensus       285 P~~RPt~-----~evl~~L  298 (363)
                      |.+||++     .+++.+-
T Consensus       235 P~~R~s~~~~~~~~ll~~~  253 (318)
T cd05570         235 PEKRLGCLPTGEQDIKGHP  253 (318)
T ss_pred             HHHcCCCCCCCHHHHhcCC
Confidence            9999999     8888753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=4.2e-28  Score=227.92  Aligned_cols=192  Identities=17%  Similarity=0.233  Sum_probs=142.6

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||+|.. .+|+.||||.+....  .......+..|+.++..+ +||||+++++++...+ .++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999985 558899999987532  223356688899999876 7999999999887666 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCcee---------------EEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~  204 (363)
                      |+|..++....                                     +......               ......+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence            99987663110                                     0000000               0112345899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||+||+.||................  ...+...+    ..+.+++..||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~----~~~~~ll~~~L~~d  234 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD--VLYPVWLS----KEAVSILKAFMTKN  234 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCC----HHHHHHHHHHhccC
Confidence            9999999999999999999999999999999999998766544333332221  11222233    44889999999999


Q ss_pred             CCCCC-------CHHHHHHHhh
Q 048684          285 SACRP-------QMSKVVQALR  299 (363)
Q Consensus       285 P~~RP-------t~~evl~~L~  299 (363)
                      |.+||       ++.+++++-.
T Consensus       235 p~~R~~~~~~~~~~~~~~~hp~  256 (321)
T cd05591         235 PNKRLGCVASQGGEDAIKQHPF  256 (321)
T ss_pred             HHHcCCCCCCCCCHHHHhcCCc
Confidence            99999       8888887643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.4e-28  Score=235.67  Aligned_cols=207  Identities=17%  Similarity=0.245  Sum_probs=148.7

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      +....++|+..+.||+|+||.||++.. .+++.||+|.+....  .......+.+|+.++..++||||+++++++.++. 
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            344457899999999999999999985 568899999986422  2223456789999999999999999999887766 


Q ss_pred             eEEEEEccCCCChhhhhhhccCCC------------------------------------Cce----------------e
Q 048684          167 MHLILELSPHGSLASLLYAKWLPD------------------------------------KWT----------------H  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~~----------------~  194 (363)
                      .++|||||++|+|.+++....++.                                    ...                .
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence            899999999999988774211100                                    000                0


Q ss_pred             EEEeecccccCCCCchhhccC----CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHG----IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                      ......+||+.|+|||++.+.    .++.++|||||||++|||++|+.||....................++.  ....+
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s  275 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE--DVEIS  275 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC--cccCC
Confidence            011234699999999999754    378999999999999999999999987654333333222211111111  11234


Q ss_pred             HHHHHHHHHccccCCCC--CCCHHHHHHHhh
Q 048684          271 TRLLLIASACINQTSAC--RPQMSKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~--RPt~~evl~~L~  299 (363)
                      ..+.+++..|+..++.+  |+++.+++++-+
T Consensus       276 ~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~  306 (370)
T cd05621         276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPF  306 (370)
T ss_pred             HHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence            45888899999755543  899999998744

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=2.1e-28  Score=225.48  Aligned_cols=192  Identities=19%  Similarity=0.270  Sum_probs=138.2

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||+|+||+||++.. .+|+.||||.+.....  ......+..|+.++..++||||+++++++.... .++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999984 5789999999864332  122456789999999999999999999776655 8899999999999


Q ss_pred             hhhhhhc-----------------------------------------cCCCCceeEE---------------Eeecccc
Q 048684          180 ASLLYAK-----------------------------------------WLPDKWTHHI---------------VSKIEGT  203 (363)
Q Consensus       180 ~~~l~~~-----------------------------------------~~~~~~~~~~---------------~~~~~gt  203 (363)
                      .+++...                                         .+.......+               .....||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            7665210                                         0000000000               1123588


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      +.|+|||++.+..++.++|||||||++|||++|+.||.....................  .++...+..+.+++..||+.
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~  238 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV--TYPDKFSPASKSFCEALLAK  238 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC--CCcccCCHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999764332111111111111111  12233445589999999999


Q ss_pred             CCCCCC-----CHHHHHHH
Q 048684          284 TSACRP-----QMSKVVQA  297 (363)
Q Consensus       284 dP~~RP-----t~~evl~~  297 (363)
                      ||.+||     ++.+++++
T Consensus       239 ~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         239 DPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CHHHhcCCCCCCHHHHhcC
Confidence            999999     67777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=9.3e-28  Score=222.78  Aligned_cols=203  Identities=20%  Similarity=0.332  Sum_probs=144.3

Q ss_pred             CCCccCCcccccCceEEEEEEEc-----------------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-----------------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM  158 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-----------------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l  158 (363)
                      ++|++.+.||+|+||+||++...                 ++..||+|.+...........|.+|+.++..++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            57889999999999999998532                 2457999999765545556789999999999999999999


Q ss_pred             EEEEEcCC-eEEEEEccCCCChhhhhhhccCCC--------------------------------Ccee-----------
Q 048684          159 IGYGVEGG-MHLILELSPHGSLASLLYAKWLPD--------------------------------KWTH-----------  194 (363)
Q Consensus       159 ~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~~--------------------------------~~~~-----------  194 (363)
                      ++++...+ .++||||+++|+|.+++.......                                ...|           
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~  164 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence            99887655 889999999999988764211000                                0000           


Q ss_pred             -----EE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh--CCCCCCCchhhHHHH
Q 048684          195 -----HI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT--GRQALDSSQKSLVMW  250 (363)
Q Consensus       195 -----~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt--G~~P~~~~~~~~~~~  250 (363)
                           .+                 .....+++.|++||+...+.++.++|||||||++|||+|  |..||..........
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~  244 (296)
T cd05095         165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE  244 (296)
T ss_pred             CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence                 00                 000112467999999988899999999999999999998  778887543322211


Q ss_pred             Hhh---hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          251 SSM---KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       251 ~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...   ........ ...+......+.+++.+||+.||.+||++.+|++.|+
T Consensus       245 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         245 NTGEFFRDQGRQVY-LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHhhcccccc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            110   00000000 0011122345899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=2.8e-28  Score=229.13  Aligned_cols=190  Identities=18%  Similarity=0.298  Sum_probs=140.8

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||+|.. .+|+.||||.+....  .......+..|+.++..+ +||||+++++++...+ .++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999985 568999999987432  223356778899998876 6999999999887766 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCcee---------------EEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~  204 (363)
                      |+|.+++....                                     +......               ......+||+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            99987764110                                     0000000               0112346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||................  ...+...    ...+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~----~~~~~~li~~~L~~d  234 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--VVYPTWL----SQDAVDILKAFMTKN  234 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC--CCCCCCC----CHHHHHHHHHHcccC
Confidence            9999999999999999999999999999999999998765443333222221  1122223    344899999999999


Q ss_pred             CCCCCCH------HHHHHH
Q 048684          285 SACRPQM------SKVVQA  297 (363)
Q Consensus       285 P~~RPt~------~evl~~  297 (363)
                      |.+||++      .+++.+
T Consensus       235 P~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         235 PTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             HHHCCCCCCCCCHHHHHcC
Confidence            9999998      666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=3.2e-28  Score=223.89  Aligned_cols=192  Identities=19%  Similarity=0.256  Sum_probs=136.1

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||+|+||+||++.. .+|+.||+|.+.....  ......+..|++++.+++||||+++++++..+. .++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999984 5699999999864321  122345667999999999999999999877655 8899999999999


Q ss_pred             hhhhhhcc---------------------------------------CCCCceeE--------------EEeecccccCC
Q 048684          180 ASLLYAKW---------------------------------------LPDKWTHH--------------IVSKIEGTFGY  206 (363)
Q Consensus       180 ~~~l~~~~---------------------------------------~~~~~~~~--------------~~~~~~gt~~y  206 (363)
                      .+++....                                       +.......              ......|++.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY  160 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence            87663100                                       00000000              01124588999


Q ss_pred             CCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCC
Q 048684          207 LPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSA  286 (363)
Q Consensus       207 ~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  286 (363)
                      +|||++.+..++.++|||||||++|||++|+.||....................+.. ........+.+++..||+.||.
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHHHHHHHhccCHh
Confidence            999999998999999999999999999999999975432221111112222111111 0112344589999999999999


Q ss_pred             CCCCHHHHHH
Q 048684          287 CRPQMSKVVQ  296 (363)
Q Consensus       287 ~RPt~~evl~  296 (363)
                      +||++.++++
T Consensus       240 ~R~~~~~~~~  249 (277)
T cd05607         240 DRLGSREKND  249 (277)
T ss_pred             hCCCCccchh
Confidence            9999977664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=2.7e-28  Score=224.55  Aligned_cols=206  Identities=21%  Similarity=0.375  Sum_probs=149.0

Q ss_pred             cCHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 048684           86 FALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGV  163 (363)
Q Consensus        86 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~  163 (363)
                      .++.++..+.+.|+..+.||.|+||.||+|.. .+++.||+|.+....  .....+..|+.++.++ +||||+++++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            35566667788999999999999999999985 568999999986543  2245788999999998 6999999999875


Q ss_pred             c-------CCeEEEEEccCCCChhhhhhhcc---C------------------------------------CCCceeEE-
Q 048684          164 E-------GGMHLILELSPHGSLASLLYAKW---L------------------------------------PDKWTHHI-  196 (363)
Q Consensus       164 ~-------~~~~lv~E~~~~gsL~~~l~~~~---~------------------------------------~~~~~~~~-  196 (363)
                      .       ...+++|||+++|+|.+++....   +                                    .......+ 
T Consensus        84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             cccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence            2       23789999999999988774210   0                                    00000000 


Q ss_pred             --------------EeecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc
Q 048684          197 --------------VSKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       197 --------------~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                    .....|++.|+|||++.     ...++.++|||||||++|||++|..||............ ....
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~-~~~~  242 (282)
T cd06636         164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI-PRNP  242 (282)
T ss_pred             eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH-hhCC
Confidence                          11235788999999986     346889999999999999999999999765432222111 1111


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+.+   .....+..+.+++.+||+.||.+|||+.+++++
T Consensus       243 ~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         243 PPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             CCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            1111   111233459999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.95  E-value=4.1e-28  Score=228.33  Aligned_cols=195  Identities=17%  Similarity=0.258  Sum_probs=143.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCC-CcceEEEEEEcCC-eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHP-NIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~-~~lv~  171 (363)
                      +|...+.||+|+||.||+|.. .+++.||||.+....  .......+..|+.++..++|+ +|+++++++...+ .|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            578889999999999999985 467899999987532  223456788999999999765 5888888776655 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~  199 (363)
                      ||+++|+|.+++....                                     +.....               ......
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence            9999999987763100                                     000000               001223


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||+||+.||.+..............  +.++...+    ..+.+++.+
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~~~~~~----~~~~~li~~  234 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPKSLS----KEAVSICKG  234 (324)
T ss_pred             ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCC----HHHHHHHHH
Confidence            468999999999999999999999999999999999999998765443333322221  22223333    448899999


Q ss_pred             ccccCCCCCCCH-----HHHHHH
Q 048684          280 CINQTSACRPQM-----SKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~-----~evl~~  297 (363)
                      ||+.||.+|++.     .+++++
T Consensus       235 ~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         235 LLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcC
Confidence            999999999986     566554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.95  E-value=4.1e-28  Score=227.61  Aligned_cols=189  Identities=18%  Similarity=0.289  Sum_probs=138.7

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVH-VDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      +.||+|+||+||+|.. .+++.||||.+....  .......+..|..++.. ++||||+++++++.+.+ .++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999985 558899999987532  12234567778888876 48999999999887666 8899999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCc---------e------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKW---------T------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~---------~------~~~~~~~~gt~  204 (363)
                      |+|.+++....                                     +....         .      .......+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence            99988764210                                     00000         0      00122346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||........... +.. ..+..+...+    ..+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~-i~~-~~~~~~~~~~----~~~~~li~~~l~~~  234 (316)
T cd05619         161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-IRM-DNPCYPRWLT----REAKDILVKLFVRE  234 (316)
T ss_pred             cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh-CCCCCCccCC----HHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999987654332222 111 1222222233    44889999999999


Q ss_pred             CCCCCCHH-HHHH
Q 048684          285 SACRPQMS-KVVQ  296 (363)
Q Consensus       285 P~~RPt~~-evl~  296 (363)
                      |.+||++. ++++
T Consensus       235 P~~R~~~~~~l~~  247 (316)
T cd05619         235 PERRLGVKGDIRQ  247 (316)
T ss_pred             HhhcCCChHHHHc
Confidence            99999997 6655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=3e-28  Score=229.50  Aligned_cols=199  Identities=19%  Similarity=0.323  Sum_probs=140.4

Q ss_pred             cCCccccc--CceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684          100 HENLIGQG--GYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus       100 ~~~~lG~G--~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ..++||+|  +||+||++. ..+|+.||||.+.... .......+.+|+.+++.++|||||++++++..++ .++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35689999  789999998 4679999999997543 2334456778999999999999999999887766 88999999


Q ss_pred             CCCChhhhhhhcc---CC------------------------------CC------ceeEE-------------------
Q 048684          175 PHGSLASLLYAKW---LP------------------------------DK------WTHHI-------------------  196 (363)
Q Consensus       175 ~~gsL~~~l~~~~---~~------------------------------~~------~~~~~-------------------  196 (363)
                      ++|+|.+++....   ++                              ..      ....+                   
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            9999988774110   00                              00      00000                   


Q ss_pred             ---EeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----------
Q 048684          197 ---VSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----------  260 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----------  260 (363)
                         .....++..|+|||++.+  ..++.++|||||||++|||++|+.||................+...           
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL  241 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence               001135677999999976  4589999999999999999999999976443222222111110000           


Q ss_pred             ------------C-----------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          261 ------------L-----------------GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       261 ------------~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                  .                 ...........+.+++.+||+.||.+|||+.+++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence                        0                 0001112345688999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.95  E-value=4.7e-28  Score=227.16  Aligned_cols=189  Identities=19%  Similarity=0.298  Sum_probs=138.0

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||+|.. .+++.||||.+....  .......+..|..++..+ +||||+++++++..+. .++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999985 568899999987532  122345566777777654 8999999999877665 8899999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence            99987763110                                     000000               01122356899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||.+.............  .+.++...+    ..+.+++..||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~----~~~~~ll~~~l~~~  234 (316)
T cd05592         161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPHFPRWIS----KEAKDCLSKLFERD  234 (316)
T ss_pred             cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCC----HHHHHHHHHHccCC
Confidence            999999999999999999999999999999999999876554333332221  222333333    34889999999999


Q ss_pred             CCCCCCHH-HHHH
Q 048684          285 SACRPQMS-KVVQ  296 (363)
Q Consensus       285 P~~RPt~~-evl~  296 (363)
                      |.+||++. ++++
T Consensus       235 P~~R~~~~~~l~~  247 (316)
T cd05592         235 PTKRLGVDGDIRQ  247 (316)
T ss_pred             HHHcCCChHHHHc
Confidence            99999976 5554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=1.5e-28  Score=235.58  Aligned_cols=211  Identities=17%  Similarity=0.243  Sum_probs=150.7

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      +.++....++|...+.||+|+||.||++.. .+++.||+|.+....  .......+.+|+.++..++||||+++++++.+
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            334455568999999999999999999985 568899999986422  12234567899999999999999999998877


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccCCC------------------------------------Ccee-------------
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWLPD------------------------------------KWTH-------------  194 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~~~-------------  194 (363)
                      +. .++|||||++|+|.+++....++.                                    ....             
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~  194 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  194 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence            66 889999999999988774211110                                    0000             


Q ss_pred             ---EEEeecccccCCCCchhhccC----CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHG----IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                         ......+||+.|+|||++...    .++.++|||||||++|||++|+.||...+................++.  ..
T Consensus       195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~  272 (371)
T cd05622         195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD--DN  272 (371)
T ss_pred             CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCC--cC
Confidence               011234699999999999754    388999999999999999999999987654433333222211111111  12


Q ss_pred             HHHHHHHHHHHHccccCCCC--CCCHHHHHHHhhc
Q 048684          268 EQLTRLLLIASACINQTSAC--RPQMSKVVQALRG  300 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~--RPt~~evl~~L~~  300 (363)
                      ..+..+.+++..|+..++.+  ||++.+++++...
T Consensus       273 ~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         273 DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence            33445889999999844433  7899999987653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=2.8e-28  Score=230.18  Aligned_cols=200  Identities=16%  Similarity=0.215  Sum_probs=139.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------CeE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------GMH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~  168 (363)
                      +|.+.++||+|+||.||+|.. .+|..||||.+.... .......+.+|+.++++++||||+++++++...      ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            477889999999999999984 578999999986432 222345788999999999999999999987532      268


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------------cCCCCcee-----------------
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------------WLPDKWTH-----------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~~~-----------------  194 (363)
                      +|||||. ++|.+++...                                     .+......                 
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  159 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT  159 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence            9999996 5887765310                                     00000000                 


Q ss_pred             -EEEeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHH--------------h-----
Q 048684          195 -HIVSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS--------------S-----  252 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~--------------~-----  252 (363)
                       ......+||+.|+|||++.+  ..++.++|||||||++|||+||++||.+.........              .     
T Consensus       160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  239 (338)
T cd07859         160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK  239 (338)
T ss_pred             cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence             01123468999999999876  6789999999999999999999999976532111000              0     


Q ss_pred             ---hhhhcCCcCCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          253 ---MKELVDPTLGDAYN---TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       253 ---~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                         ......+..+....   +.....+.+++.+||+.||.+|||+.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence               00000000000000   0123447899999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=9.2e-28  Score=218.36  Aligned_cols=194  Identities=21%  Similarity=0.311  Sum_probs=138.4

Q ss_pred             CcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEEEccC
Q 048684          102 NLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLILELSP  175 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~E~~~  175 (363)
                      +.||+|+||.||+|...    ++..||+|.+...........+.+|+.+++.++||||+++++++...  ..++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999842    24579999986544444467899999999999999999999977543  3789999999


Q ss_pred             CCChhhhhhhccC--------------------------------------CCCceeEE-------------------Ee
Q 048684          176 HGSLASLLYAKWL--------------------------------------PDKWTHHI-------------------VS  198 (363)
Q Consensus       176 ~gsL~~~l~~~~~--------------------------------------~~~~~~~~-------------------~~  198 (363)
                      +|+|.+++.....                                      .......+                   ..
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  160 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT  160 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence            9999888742100                                      00000000                   01


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhC-CCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG-RQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+++.|+|||++.+..++.++|||||||++|||++| .+||........ ...+.....+..+...    +..+.+++
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~li  235 (262)
T cd05058         161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI-TVYLLQGRRLLQPEYC----PDPLYEVM  235 (262)
T ss_pred             cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhcCCCCCCCCcC----CHHHHHHH
Confidence            22346689999999888999999999999999999995 556654432221 1222221122222222    34588999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..||+.+|.+||++.+|+..|+.
T Consensus       236 ~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         236 LSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             HHHcCCChhhCCCHHHHHHHHHH
Confidence            99999999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=2.8e-29  Score=229.17  Aligned_cols=197  Identities=16%  Similarity=0.254  Sum_probs=156.1

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      -+|++.+.||+|+||.|-++. ...|+.||||.+.++.  +++..-.+.+||+||..|+||||+++|.++.+.+ ..|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            468888999999999999998 6789999999998765  3445667889999999999999999999888776 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce--------------eEEEeec
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT--------------HHIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~--------------~~~~~~~  200 (363)
                      ||..+|.|.||+....                                     +.....              ...+..+
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF  212 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF  212 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence            9999999999985110                                     111111              1123467


Q ss_pred             ccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ||++-|.+||++++.+| ++.+|.|||||+||-|+.|..||++.+......++..+....       ++.+.....||.+
T Consensus       213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE-------P~~PSdA~gLIRw  285 (668)
T KOG0611|consen  213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE-------PETPSDASGLIRW  285 (668)
T ss_pred             cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC-------CCCCchHHHHHHH
Confidence            99999999999999988 589999999999999999999999876654443333332211       1122236789999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      ||-.+|++|.|+.+|..+-+
T Consensus       286 mLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  286 MLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             HHhcCcccchhHHHHhhhhe
Confidence            99999999999999998644

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.95  E-value=1.2e-27  Score=218.65  Aligned_cols=199  Identities=21%  Similarity=0.385  Sum_probs=146.3

Q ss_pred             CCccCCcccccCceEEEEEEEcC--CcEEEEEEecCCC---------chhHHHHHHHHHHHHHh-CCCCCcceEEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQLED--GQFVAIKRLTRGS---------PEEMTTDYLSELGIIVH-VDHPNIAKMIGYGVE  164 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~~~~~~---------~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~  164 (363)
                      +|+..+.||+|+||.||+|....  ++.+|||.+....         .......+.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47788999999999999999643  7889999875321         22335668889998875 799999999998776


Q ss_pred             CC-eEEEEEccCCCChhhhhhhc------------------------cCCC-C-ceeE----------------------
Q 048684          165 GG-MHLILELSPHGSLASLLYAK------------------------WLPD-K-WTHH----------------------  195 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~------------------------~~~~-~-~~~~----------------------  195 (363)
                      ++ .++||||+++++|.+++...                        .+.. . ..|.                      
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            65 88999999999998776310                        0110 0 0110                      


Q ss_pred             --------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          196 --------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       196 --------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                              ......|+..|+|||++.+..++.++|||||||++|||++|++||..................+.....++ 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYS-  239 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCC-
Confidence                    01123478899999999988899999999999999999999999976544333322222222222211233 


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         ..+.+++.+||+.||.+||++.++..++.
T Consensus       240 ---~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         240 ---EDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ---HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence               44899999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=2.4e-28  Score=230.39  Aligned_cols=200  Identities=19%  Similarity=0.239  Sum_probs=145.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||+||++.. .+|+.||||.+....  .......+..|+.++..++||||+++++++.+.. .++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4688899999999999999984 568999999997532  2234567889999999999999999999877665 89999


Q ss_pred             EccCCCChhhhhhhc--cCC------------------------------------CCc---------e-------eEEE
Q 048684          172 ELSPHGSLASLLYAK--WLP------------------------------------DKW---------T-------HHIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--~~~------------------------------------~~~---------~-------~~~~  197 (363)
                      ||+++|+|.+++...  .++                                    ...         .       ....
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            999999998887421  000                                    000         0       0011


Q ss_pred             eecccccCCCCchhhc------cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          198 SKIEGTFGYLPPEFFM------HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                      ....||+.|+|||++.      ...++.++|||||||++|||++|+.||.....................+.  ......
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~  238 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE--DPKVSS  238 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCC--CCCCCH
Confidence            1235899999999996      45688999999999999999999999986654333222221111111111  112334


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+.+++..||. +|.+|||+.+++.+-
T Consensus       239 ~~~~li~~ll~-~p~~R~t~~~l~~h~  264 (330)
T cd05601         239 DFLDLIQSLLC-GQKERLGYEGLCCHP  264 (330)
T ss_pred             HHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence            48899999997 999999999999753

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.95  E-value=1.2e-27  Score=217.65  Aligned_cols=199  Identities=21%  Similarity=0.328  Sum_probs=149.3

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEcc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELS  174 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~  174 (363)
                      .++|...+.||+|+||.||++...++..+|+|.+....  .....|.+|+.+++.++|+||+++++++.....+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeC
Confidence            46788999999999999999997777889999887543  2246789999999999999999999988886689999999


Q ss_pred             CCCChhhhhhhcc---C------------------------------------CCCceeEE----------------Eee
Q 048684          175 PHGSLASLLYAKW---L------------------------------------PDKWTHHI----------------VSK  199 (363)
Q Consensus       175 ~~gsL~~~l~~~~---~------------------------------------~~~~~~~~----------------~~~  199 (363)
                      ++|+|.+++....   .                                    .......+                ...
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  162 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence            9999988874210   0                                    00000000                001


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..++..|+|||++....++.++|||||||++|+|+| |..||........... +...........    ....+.+++.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~i~  237 (260)
T cd05073         163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERGYRMPRPEN----CPEELYNIMM  237 (260)
T ss_pred             CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HhCCCCCCCccc----CCHHHHHHHH
Confidence            124567999999998889999999999999999999 9999986544333222 222222112222    3345999999


Q ss_pred             HccccCCCCCCCHHHHHHHhhc
Q 048684          279 ACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +||+.+|.+||++.+++..|..
T Consensus       238 ~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         238 RCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHcccCcccCcCHHHHHHHHhc
Confidence            9999999999999999998853

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.95  E-value=2.7e-28  Score=229.49  Aligned_cols=195  Identities=16%  Similarity=0.240  Sum_probs=144.1

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +|...+.||+|+||.||+|.. .+++.||||.+....  .......+..|..++..+ +|++|+++++++...+ .++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            578889999999999999985 467899999987542  222345677888888877 5899999999877665 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~  199 (363)
                      ||+++|+|.+++....                                     +.....               ......
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence            9999999987763100                                     000000               001123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||+||+.||.+..............  ..++.    .....+.+++.+
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~--~~~p~----~~s~~~~~li~~  234 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPK----SMSKEAVAICKG  234 (323)
T ss_pred             CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCC----cCCHHHHHHHHH
Confidence            568999999999999999999999999999999999999998766544433333221  12222    234458999999


Q ss_pred             ccccCCCCCCCH-----HHHHHH
Q 048684          280 CINQTSACRPQM-----SKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~-----~evl~~  297 (363)
                      ||+.||.+|++.     .+++++
T Consensus       235 ~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         235 LMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             HcccCHHhcCCCCCCCHHHHhcC
Confidence            999999999985     566543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=9.6e-28  Score=219.33  Aligned_cols=200  Identities=26%  Similarity=0.404  Sum_probs=146.1

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|... +|   ..||||.+...........|..|+.+++.++||||+++++++..+. .++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            35778899999999999999853 34   3699999876544555678999999999999999999999887665 7899


Q ss_pred             EEccCCCChhhhhhhccC--------------------------------C------CCceeEE----------------
Q 048684          171 LELSPHGSLASLLYAKWL--------------------------------P------DKWTHHI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~--------------------------------~------~~~~~~~----------------  196 (363)
                      |||+++|+|.+++.....                                +      ......+                
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  163 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  163 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence            999999999887742100                                0      0000000                


Q ss_pred             --Eeecc--cccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          197 --VSKIE--GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       197 --~~~~~--gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                        .....  ++..|+|||++.+..++.++|||||||++|||++ |..||........... +............    +.
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~----~~  238 (269)
T cd05065         164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINA-IEQDYRLPPPMDC----PT  238 (269)
T ss_pred             ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHH-HHcCCcCCCcccC----CH
Confidence              00001  1346999999999999999999999999999887 9999976544322222 2221111112223    34


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+.+++..||+.+|.+||++.+|+..|+.
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         239 ALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            48899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=1.1e-27  Score=218.59  Aligned_cols=197  Identities=18%  Similarity=0.303  Sum_probs=143.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      .+|...+.||+|+||.||+|.. .+|..||+|.+....    .......+.+|+.+++.++||||+++++++...   ..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4788999999999999999984 568999999886432    123345788999999999999999999987652   27


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeEE--------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI--------------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~--------------  196 (363)
                      ++++||+++++|.+++....                                     +.......+              
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            89999999999988764210                                     000000000              


Q ss_pred             ----EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          197 ----VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       197 ----~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                          .....|+..|+|||++.+..++.++|||||||++|||++|+.||..................+.+    +......
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  237 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQL----PSHISEH  237 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCC----chhcCHH
Confidence                01234788899999999888999999999999999999999999865433222222222222322    2223344


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHH
Q 048684          273 LLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +..++ .||..+|.+||++.+|+.+
T Consensus       238 ~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         238 ARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HHHHH-HHhcCChhhCcCHHHHhcC
Confidence            66676 6888999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.95  E-value=1e-27  Score=217.27  Aligned_cols=197  Identities=19%  Similarity=0.299  Sum_probs=150.0

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||.|+||.||.+. ..+|..|++|.+.... .......+.+|+.++++++|+||+++++++.+.. .+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            47888999999999999998 4668999999986443 3344567899999999999999999999887766 7899999


Q ss_pred             cCCCChhhhhhhcc---C------------------------------------CCCceeE---------------EEee
Q 048684          174 SPHGSLASLLYAKW---L------------------------------------PDKWTHH---------------IVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~------------------------------------~~~~~~~---------------~~~~  199 (363)
                      +++|+|.+++....   +                                    .......               ....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            99999998775320   0                                    0000000               0122


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|++.|+|||++.+..++.++|||||||++|||++|..||..................+.     .......+.+++..
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~  235 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV-----VSVYSSELISLVHS  235 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-----ccccCHHHHHHHHH
Confidence            4588999999999888899999999999999999999999987654433333332222221     12233458899999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||..+|.+||++.++++++
T Consensus       236 ~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         236 LLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HcccCcccCCCHHHHhhCc
Confidence            9999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=9.4e-28  Score=219.39  Aligned_cols=197  Identities=20%  Similarity=0.292  Sum_probs=137.3

Q ss_pred             CcccccCceEEEEEEEcC---CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQLED---GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~---g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      +.||+|+||.||+|...+   ...+|+|.+...........|.+|+.+++.++||||+++++++.... .++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997433   45789998865544445567899999999999999999999887665 89999999999


Q ss_pred             ChhhhhhhccC------------------------------------------CCCceeEE-----------------Ee
Q 048684          178 SLASLLYAKWL------------------------------------------PDKWTHHI-----------------VS  198 (363)
Q Consensus       178 sL~~~l~~~~~------------------------------------------~~~~~~~~-----------------~~  198 (363)
                      +|.+++.....                                          .......+                 ..
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence            99987742110                                          00000000                 01


Q ss_pred             ecccccCCCCchhhcc-------CCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          199 KIEGTFGYLPPEFFMH-------GIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                      ...+++.|+|||++..       ..++.++|||||||++|||++ |..||............+.....+......+....
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS  240 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence            1124567999999753       356889999999999999999 78888765433333332222211111111222334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..+.+++..|| .||.+|||+.+|++.|.
T Consensus       241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         241 DRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            45778889998 59999999999998773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=9.1e-29  Score=229.83  Aligned_cols=198  Identities=18%  Similarity=0.303  Sum_probs=148.1

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .+|...+.||.|+||.||+|. ..+|+.||||.+...... ....+.+|+.+++.++||||+++++++...+ .++|+||
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            468999999999999999998 467999999998754433 2567889999999999999999999877665 8999999


Q ss_pred             cCCCChhhhhhhccCCC------------------------------------CceeE---------------EEeeccc
Q 048684          174 SPHGSLASLLYAKWLPD------------------------------------KWTHH---------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~~------------------------------------~~~~~---------------~~~~~~g  202 (363)
                      +++|+|..++....++.                                    .....               ......|
T Consensus        98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  177 (296)
T cd06655          98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVG  177 (296)
T ss_pred             cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCC
Confidence            99999988764211100                                    00000               0112357


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      ++.|+|||.+.+..++.++|||||||++|+|++|+.||................ .+.+  ..+......+.+++.+||.
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~  254 (296)
T cd06655         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPEL--QNPEKLSPIFRDFLNRCLE  254 (296)
T ss_pred             CccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-Cccc--CCcccCCHHHHHHHHHHhh
Confidence            889999999998889999999999999999999999998764432221111111 1111  1122233458899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 048684          283 QTSACRPQMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RPt~~evl~~  297 (363)
                      .||.+|||+.+++.+
T Consensus       255 ~dp~~Rpt~~~il~~  269 (296)
T cd06655         255 MDVEKRGSAKELLQH  269 (296)
T ss_pred             cChhhCCCHHHHhhC
Confidence            999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=6.1e-28  Score=223.07  Aligned_cols=200  Identities=18%  Similarity=0.287  Sum_probs=138.5

Q ss_pred             CCccCCcccccCceEEEEEEE-c-CCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhC---CCCCcceEEEEEEc------
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-E-DGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHV---DHPNIAKMIGYGVE------  164 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~-~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~------  164 (363)
                      +|...+.||+|+||+||+|.. . +|..||||.+..... ......+.+|+.++..+   +||||+++++++..      
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            688889999999999999985 3 468899999864332 22234567788777765   69999999998752      


Q ss_pred             CCeEEEEEccCCCChhhhhhhcc---------------------------------------CCCCcee-----------
Q 048684          165 GGMHLILELSPHGSLASLLYAKW---------------------------------------LPDKWTH-----------  194 (363)
Q Consensus       165 ~~~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~~-----------  194 (363)
                      ...++||||++ |+|.+++....                                       +......           
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            23789999997 57776653100                                       0000000           


Q ss_pred             ---EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----------
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----------  260 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----------  260 (363)
                         .......||+.|+|||++.+..++.++|||||||++|||++|++||.+..........+.....+.           
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (290)
T cd07862         161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  240 (290)
T ss_pred             cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhccc
Confidence               011234589999999999988999999999999999999999999987644332222221110000           


Q ss_pred             -------CCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          261 -------LGD---AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       261 -------~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                             ...   ...+.....+.+++.+||+.||.+|||+.+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         241 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             chhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence                   000   0001223457899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.95  E-value=9.8e-28  Score=217.44  Aligned_cols=196  Identities=21%  Similarity=0.403  Sum_probs=145.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      .+|...+.||.|+||.||+|...++..+|+|.+......  ...|.+|++++..++||||+++++++.... .++||||+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            467888999999999999998766889999998754432  357899999999999999999999877655 88999999


Q ss_pred             CCCChhhhhhhcc--CC------------------------------------CCceeE---------EE-------eec
Q 048684          175 PHGSLASLLYAKW--LP------------------------------------DKWTHH---------IV-------SKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--~~------------------------------------~~~~~~---------~~-------~~~  200 (363)
                      ++|+|.+++....  ++                                    ......         ..       ...
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~  161 (256)
T cd05112          82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGT  161 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCC
Confidence            9999988774210  00                                    000000         00       011


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .++..|+|||++.++.++.++|||||||++|||++ |..||........... +.....+..+...+    ..+.+|+.+
T Consensus       162 ~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~l~~~  236 (256)
T cd05112         162 KFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFRLYKPRLAS----QSVYELMQH  236 (256)
T ss_pred             ccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCCCCCCCCCC----HHHHHHHHH
Confidence            23457999999998899999999999999999998 9999976543332222 22111111122233    459999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||+.+|.+|||+.++++.|
T Consensus       237 ~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         237 CWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HcccChhhCCCHHHHHHhh
Confidence            9999999999999999887

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=2.9e-28  Score=229.41  Aligned_cols=192  Identities=17%  Similarity=0.260  Sum_probs=143.2

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      +.||+|+||.||++.. .+|..||+|.+....  .......+..|+.++..++||||+++++++.... .++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999984 578999999997432  2233567789999999999999999999877665 89999999999


Q ss_pred             Chhhhhhhc--------------------cCC--CCceeE-------------------------------EEeeccccc
Q 048684          178 SLASLLYAK--------------------WLP--DKWTHH-------------------------------IVSKIEGTF  204 (363)
Q Consensus       178 sL~~~l~~~--------------------~~~--~~~~~~-------------------------------~~~~~~gt~  204 (363)
                      +|..++...                    .+.  ....|.                               .....+||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            998766311                    000  000000                               011245899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||+||+.||...............  ...++...++    .+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~----~~~~li~~~L~~d  234 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSP----EAKSLLSGLLKKD  234 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCH----HHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999765543322222111  2222333444    4899999999999


Q ss_pred             CCCCC-----CHHHHHHHhh
Q 048684          285 SACRP-----QMSKVVQALR  299 (363)
Q Consensus       285 P~~RP-----t~~evl~~L~  299 (363)
                      |.+|+     ++.+++++-.
T Consensus       235 P~~R~~~~~~~~~~il~h~~  254 (325)
T cd05594         235 PKQRLGGGPDDAKEIMQHKF  254 (325)
T ss_pred             HHHhCCCCCCCHHHHhcCCC
Confidence            99996     8999997644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=2.1e-28  Score=225.67  Aligned_cols=198  Identities=22%  Similarity=0.345  Sum_probs=146.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||+|+||.||++.. .+|..||+|.+...........+.+|+.++.+++||||+++++++...+ .++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            3688889999999999999985 4789999999875444444578999999999999999999999766555 8999999


Q ss_pred             cCCCChhhhhhhc----cCCC---------------------CceeE-----------------------------EEee
Q 048684          174 SPHGSLASLLYAK----WLPD---------------------KWTHH-----------------------------IVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~----~~~~---------------------~~~~~-----------------------------~~~~  199 (363)
                      +++++|..++...    .++.                     ...|.                             ....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT  160 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence            9999998776531    1100                     01010                             0011


Q ss_pred             cccccCCCCchhhccC------CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh---hcCCcCCCCCCHHHH
Q 048684          200 IEGTFGYLPPEFFMHG------IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE---LVDPTLGDAYNTEQL  270 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  270 (363)
                      ..|++.|+|||++.+.      .++.++|||||||++|+|++|+.||......... ..+..   ...+.+    +....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~  235 (286)
T cd06622         161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVDGDPPTL----PSGYS  235 (286)
T ss_pred             CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhhcCCCCC----CcccC
Confidence            2477889999998554      3588999999999999999999999764332221 11122   222222    22344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+.+++.+||+.+|.+||++.+++++-
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~l~~~~  263 (286)
T cd06622         236 DDAQDFVAKCLNKIPNRRPTYAQLLEHP  263 (286)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence            5589999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9e-30  Score=243.08  Aligned_cols=201  Identities=24%  Similarity=0.395  Sum_probs=152.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCCeEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~~lv~E  172 (363)
                      .+.|.++..||.|+||.||++.. .++...|-|.+.... ++..+.|+-||+||+.++||+||+|++ |+.++.+||+.|
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            45678888999999999999984 446666778776544 445889999999999999999999998 777888999999


Q ss_pred             ccCCCChhhhhhh---------------------ccCCCC-cee----------------E---------------EEee
Q 048684          173 LSPHGSLASLLYA---------------------KWLPDK-WTH----------------H---------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~---------------------~~~~~~-~~~----------------~---------------~~~~  199 (363)
                      ||.||....++..                     .++... ..|                +               --..
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence            9999987665530                     011000 000                0               0123


Q ss_pred             cccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       200 ~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      +.|||+|||||+..     ..+|+.++|||||||+|.||..+.+|-...+...+...+.+. -+|.+.  -+..++..+.
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS-ePPTLl--qPS~Ws~~F~  266 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTLL--QPSHWSRSFS  266 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc-CCCccc--CcchhhhHHH
Confidence            56999999999874     568999999999999999999999998776655444443332 223332  3455667799


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhh
Q 048684          275 LIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +++..||..||..||++.+++++-.
T Consensus       267 DfLk~cL~Knp~~Rp~aaqll~Hpf  291 (1187)
T KOG0579|consen  267 DFLKRCLVKNPRNRPPAAQLLKHPF  291 (1187)
T ss_pred             HHHHHHHhcCCccCCCHHHHhhCcc
Confidence            9999999999999999999998644

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=5e-28  Score=219.33  Aligned_cols=196  Identities=20%  Similarity=0.336  Sum_probs=147.8

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||+|+||.||++. ..+|+.||+|.+.... .......+.+|+.++++++||||+++++++...+ .++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            47788999999999999998 4568999999986432 2334568899999999999999999999887665 8899999


Q ss_pred             cCCCChhhhhhhcc---CC------------------------------------CCceeEEE---------------ee
Q 048684          174 SPHGSLASLLYAKW---LP------------------------------------DKWTHHIV---------------SK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~~------------------------------------~~~~~~~~---------------~~  199 (363)
                      +++++|.+++....   ++                                    ......+.               ..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            99999988764211   00                                    00000000               11


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|++.|+|||++.+..++.++|||||||++|+|+||+.||................. +....    .....+.+++.+
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~li~~  235 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-PPVSS----HYSYDLRNLVSQ  235 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-CCCcc----cCCHHHHHHHHH
Confidence            2478889999999988999999999999999999999999976544333333332222 22222    233459999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.+|.+||++.+|+.+
T Consensus       236 ~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         236 LFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HhhCChhhCcCHHHHhhC
Confidence            999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=8.4e-28  Score=226.85  Aligned_cols=198  Identities=19%  Similarity=0.288  Sum_probs=143.5

Q ss_pred             CCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-e
Q 048684           97 NFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~  167 (363)
                      +|++.+.||+|+||+||++..    .+|+.||+|.+....   .......+..|+.++..+ +||||+++++++...+ .
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478889999999999999874    358899999986432   122345688999999999 5999999999877655 8


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCcee----------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTH----------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~----------------  194 (363)
                      ++||||+++|+|.+++....                                     +......                
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            89999999999988764110                                     0000000                


Q ss_pred             EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                      ......+||+.|+|||++.+. .++.++|||||||++|||+||+.||......   ......+. ..++.++...+.   
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---  236 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL-KCDPPFPSFIGP---  236 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCH---
Confidence            011234689999999999865 4889999999999999999999999743221   11111111 123333333343   


Q ss_pred             HHHHHHHHHccccCCCCCC-----CHHHHHHHhh
Q 048684          271 TRLLLIASACINQTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RP-----t~~evl~~L~  299 (363)
                       .+.+++.+||+.||.+||     ++.+++++-+
T Consensus       237 -~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  269 (332)
T cd05614         237 -EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF  269 (332)
T ss_pred             -HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence             488999999999999999     7788887644

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=2.4e-27  Score=218.65  Aligned_cols=200  Identities=20%  Similarity=0.303  Sum_probs=144.2

Q ss_pred             CCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~  168 (363)
                      .|...+.||+|+||.||.+..     .++..||+|.+...........+.+|+.+++.++||||+++++++...   ..+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467889999999999999974     347889999987655444567899999999999999999999988764   378


Q ss_pred             EEEEccCCCChhhhhhhcc--CC------------------------------------CCcee----------------
Q 048684          169 LILELSPHGSLASLLYAKW--LP------------------------------------DKWTH----------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--~~------------------------------------~~~~~----------------  194 (363)
                      +||||+++|+|.+++....  ++                                    .....                
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE  164 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence            9999999999988874210  00                                    00000                


Q ss_pred             --EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH-------------H-HHHhhhhhcC
Q 048684          195 --HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL-------------V-MWSSMKELVD  258 (363)
Q Consensus       195 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-------------~-~~~~~~~~~~  258 (363)
                        .......|+..|+|||++.+..++.++|||||||++|||+||+.|+.......             . ....+.....
T Consensus       165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd05079         165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR  244 (284)
T ss_pred             ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc
Confidence              00112345667999999998899999999999999999999887653211100             0 0001111111


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....    ..+..+.+|+.+||+.+|.+|||+.++++.|+.
T Consensus       245 ~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         245 LPRPP----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             CCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            11112    234459999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=1.1e-27  Score=223.56  Aligned_cols=201  Identities=24%  Similarity=0.382  Sum_probs=147.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEc--------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE--------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      .++|.+.+.||+|+||.||++...        ++..||+|.+...........+..|+.++..+ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            367999999999999999999742        23579999997654444456788999999999 799999999988766


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc-----------------CCC--------------------Ccee-------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKW-----------------LPD--------------------KWTH-------------  194 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~-----------------~~~--------------------~~~~-------------  194 (363)
                      + .++||||+++|+|.+++....                 ++.                    ...|             
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  176 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  176 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence            5 889999999999988875321                 000                    0000             


Q ss_pred             ---EE-----E------------eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          195 ---HI-----V------------SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       195 ---~~-----~------------~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                         .+     .            ....+++.|+|||++.+..++.++|||||||++|||++ |..||........... +
T Consensus       177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~-~  255 (307)
T cd05098         177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-L  255 (307)
T ss_pred             CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-H
Confidence               00     0            00113357999999998899999999999999999998 8899876544322222 2


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ........    +......+.+++..||+.+|.+|||+.+|++.|..
T Consensus       256 ~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         256 KEGHRMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             HcCCCCCC----CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence            22111122    22234458899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.95  E-value=6.9e-28  Score=226.05  Aligned_cols=190  Identities=17%  Similarity=0.262  Sum_probs=139.2

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||+|.. .+|..||||.+....  .......+..|..++... +||||+++++++.+.+ .|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999999985 568999999997532  122345677888888764 8999999999877665 8899999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence            99987664110                                     000000               01123456899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||........... +.. ..+.++...+.    .+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~-~~~-~~~~~~~~~~~----~~~~li~~~l~~d  234 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES-IRV-DTPHYPRWITK----ESKDILEKLFERD  234 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH-HHh-CCCCCCCCCCH----HHHHHHHHHccCC
Confidence            99999999999999999999999999999999999987654332222 211 12333333333    4889999999999


Q ss_pred             CCCCCCHH-HHHHH
Q 048684          285 SACRPQMS-KVVQA  297 (363)
Q Consensus       285 P~~RPt~~-evl~~  297 (363)
                      |.+||++. +++++
T Consensus       235 P~~R~~~~~~~~~h  248 (316)
T cd05620         235 PTRRLGVVGNIRGH  248 (316)
T ss_pred             HHHcCCChHHHHcC
Confidence            99999985 56544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.2e-27  Score=218.26  Aligned_cols=200  Identities=21%  Similarity=0.387  Sum_probs=148.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||+|+||.||+|.. .+|.    .||+|.+...........+.+|+.++.+++||||+++++++.....++|
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            5678889999999999999984 3343    5899998766555556789999999999999999999999988779999


Q ss_pred             EEccCCCChhhhhhhccCC----------------------CCcee----------------EE----------------
Q 048684          171 LELSPHGSLASLLYAKWLP----------------------DKWTH----------------HI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~~----------------------~~~~~----------------~~----------------  196 (363)
                      |||+++|+|.+++......                      ....|                .+                
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  166 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY  166 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccce
Confidence            9999999999887521000                      00000                00                


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....++..|+|||.+....++.++|||||||++||+++ |+.||........... +........+...+    ..+.
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~  241 (279)
T cd05057         167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDL-LEKGERLPQPPICT----IDVY  241 (279)
T ss_pred             ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-HhCCCCCCCCCCCC----HHHH
Confidence             000113467999999988899999999999999999999 9999987654332222 22211112222233    3488


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +++.+||..+|..||++.++++.|..
T Consensus       242 ~~~~~~l~~~p~~Rp~~~~l~~~l~~  267 (279)
T cd05057         242 MVLVKCWMIDAESRPTFKELINEFSK  267 (279)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            99999999999999999999988854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=9e-28  Score=221.88  Aligned_cols=198  Identities=20%  Similarity=0.277  Sum_probs=144.0

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      |+..++||+|+||+||++.. .+++.||||.+.....  ......+.+|+.++..++|+||+.+++.+...+ .++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            67778999999999999984 5789999999865432  222356789999999999999999999877655 8899999


Q ss_pred             cCCCChhhhhhhcc---CC------------------------------------CCceeE--------------EEeec
Q 048684          174 SPHGSLASLLYAKW---LP------------------------------------DKWTHH--------------IVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~~------------------------------------~~~~~~--------------~~~~~  200 (363)
                      +++|+|.+++....   ++                                    ......              .....
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR  161 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence            99999988763110   00                                    000000              00123


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--HHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--MWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||........  ................+    ...+.+++.
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~  237 (285)
T cd05630         162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKF----SPDARSLCK  237 (285)
T ss_pred             CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccC----CHHHHHHHH
Confidence            588999999999999999999999999999999999999986432111  11111111111222223    344899999


Q ss_pred             HccccCCCCCCC-----HHHHHHHhh
Q 048684          279 ACINQTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt-----~~evl~~L~  299 (363)
                      .||+.||.+|||     +.+++++-.
T Consensus       238 ~~l~~~p~~R~s~~~~~~~~~~~h~~  263 (285)
T cd05630         238 MLLCKDPKERLGCQGGGAREVKEHPL  263 (285)
T ss_pred             HHhhcCHHHccCCCCCchHHHHcChh
Confidence            999999999999     888887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=217.66  Aligned_cols=201  Identities=20%  Similarity=0.285  Sum_probs=149.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||.|+||.||+|.. .++..+|+|.+...... ....+.+|+.+++.++||||+++++++.... .+++||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            36788999999999999999985 56889999999765433 3578999999999999999999999877666 889999


Q ss_pred             ccCCCChhhhhhhcc--C------------------------------------CCCceeE---------------EEee
Q 048684          173 LSPHGSLASLLYAKW--L------------------------------------PDKWTHH---------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--~------------------------------------~~~~~~~---------------~~~~  199 (363)
                      |+++++|.+++....  +                                    .......               ....
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS  160 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence            999999988764210  0                                    0000000               0112


Q ss_pred             cccccCCCCchhhccC---CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHG---IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~---~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ..|+..|+|||.+.+.   .++.++|||||||++|||+||++||..................+.. ..........+.++
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  239 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK-LKDKEKWSPVFHDF  239 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc-ccchhhhhHHHHHH
Confidence            3477889999999777   8899999999999999999999999865433322222222111111 11233445669999


Q ss_pred             HHHccccCCCCCCCHHHHHHH
Q 048684          277 ASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+||..+|..|||+.+|+.+
T Consensus       240 i~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhcC
Confidence            999999999999999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=5.9e-28  Score=222.59  Aligned_cols=208  Identities=22%  Similarity=0.337  Sum_probs=147.9

Q ss_pred             cCHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 048684           86 FALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGV  163 (363)
Q Consensus        86 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~  163 (363)
                      +.+..+..+.++|+..+.||+|+||.||++.. .+|+.+|+|.+.....  ....+.+|+.++..+ +||||+++++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            44556667889999999999999999999985 5688999998864332  235678899999999 6999999999774


Q ss_pred             c------CCeEEEEEccCCCChhhhhhhc-----cC------------------------------------CCCc----
Q 048684          164 E------GGMHLILELSPHGSLASLLYAK-----WL------------------------------------PDKW----  192 (363)
Q Consensus       164 ~------~~~~lv~E~~~~gsL~~~l~~~-----~~------------------------------------~~~~----  192 (363)
                      .      ...++||||+++|+|.+++...     .+                                    ....    
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEE
Confidence            2      2278999999999998765310     00                                    0000    


Q ss_pred             -----eeE------EEeecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh
Q 048684          193 -----THH------IVSKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL  256 (363)
Q Consensus       193 -----~~~------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~  256 (363)
                           ...      ......|++.|+|||++..     ..++.++|||||||++|||++|+.||........... ....
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~  244 (286)
T cd06638         166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRN  244 (286)
T ss_pred             ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-cccc
Confidence                 000      0012358899999999853     4578999999999999999999999976543222111 1111


Q ss_pred             cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+...  .+......+.+++.+||+.||.+|||+.++++++
T Consensus       245 ~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         245 PPPTLH--QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             CCCccc--CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            111111  1111233488999999999999999999999764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=6.5e-28  Score=218.30  Aligned_cols=197  Identities=20%  Similarity=0.336  Sum_probs=146.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||.|+||.||+|... ++..||+|.+.....   ...+.+|+.++++++||||+++++++.... .++++|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            367899999999999999999964 488999999865422   578999999999999999999999877665 889999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCceeE---------------EEee
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------~~~~  199 (363)
                      |+++++|.+++....                                      +.......               ....
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            999999988774110                                      00000000               0112


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|+..|+|||++.+..++.++|||||||++|+|++|+.||............ .....+.+  ..+......+.+++..
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~i~~  235 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI-PNKPPPTL--SDPEKWSPEFNDFVKK  235 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh-ccCCCCCC--CchhhcCHHHHHHHHH
Confidence            34788999999999889999999999999999999999999765432221111 11111111  1122334568999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||..|||+.+|+.+
T Consensus       236 ~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         236 CLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             HHhcChhhCcCHHHHhcC
Confidence            999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.95  E-value=1.6e-27  Score=224.81  Aligned_cols=192  Identities=18%  Similarity=0.254  Sum_probs=137.8

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||++.. .+++.||+|.+....  .......+..|+.++.++ +|||||++++++.... .++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999985 568899999997532  223356678899988877 7999999999877655 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCcee---------------EEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~  204 (363)
                      |+|..++....                                     +......               ......+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence            99987653100                                     0000000               0112356899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh--------hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK--------SLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      .|+|||++.+..++.++|||||||++|||+||+.||.....        ....+..+.. ....++...    ...+.++
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~----~~~~~~l  235 (329)
T cd05618         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSL----SVKAASV  235 (329)
T ss_pred             cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-CCCCCCCCC----CHHHHHH
Confidence            99999999999999999999999999999999999953110        1111111111 112222333    3448899


Q ss_pred             HHHccccCCCCCCC------HHHHHHHh
Q 048684          277 ASACINQTSACRPQ------MSKVVQAL  298 (363)
Q Consensus       277 i~~cl~~dP~~RPt------~~evl~~L  298 (363)
                      +.+||+.||.+||+      +.+++++-
T Consensus       236 l~~~L~~dP~~R~~~~~~~~~~~i~~hp  263 (329)
T cd05618         236 LKSFLNKDPKERLGCHPQTGFADIQGHP  263 (329)
T ss_pred             HHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence            99999999999998      46777653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=5.4e-28  Score=230.80  Aligned_cols=200  Identities=23%  Similarity=0.272  Sum_probs=144.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||+||++.. .+|+.||||.+....  .......+..|+.++..++||||+++++++.+.. .++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999985 568999999986432  2233567889999999999999999999877665 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE-------------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH-------------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~-------------------  195 (363)
                      |||++|+|.+++....                                     +.......                   
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            9999999988774110                                     00000000                   


Q ss_pred             -------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch
Q 048684          196 -------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ  244 (363)
Q Consensus       196 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~  244 (363)
                                                     .....+||+.|+|||++.+..++.++|||||||++|||+||++||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                                           0113469999999999999999999999999999999999999998765


Q ss_pred             hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHHh
Q 048684          245 KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ---MSKVVQAL  298 (363)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~L  298 (363)
                      ................++...  .....+.+++.+|+ .||.+|++   +.+++++-
T Consensus       241 ~~~~~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp  294 (360)
T cd05627         241 PQETYRKVMNWKETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP  294 (360)
T ss_pred             HHHHHHHHHcCCCceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC
Confidence            443332222111111111111  12334777887766 49999985   67887753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.95  E-value=6.6e-28  Score=218.34  Aligned_cols=193  Identities=28%  Similarity=0.454  Sum_probs=145.8

Q ss_pred             CcccccCceEEEEEEEc-C---CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQLE-D---GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~-~---g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      +.||+|+||.||+|... .   +..||||.+...........+.+|+.++..++|+||+++++++.... .++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            46999999999999854 3   78899999986654444678999999999999999999999887755 8999999999


Q ss_pred             CChhhhhhhc----------cCCCC--------------------cee--------------------------------
Q 048684          177 GSLASLLYAK----------WLPDK--------------------WTH--------------------------------  194 (363)
Q Consensus       177 gsL~~~l~~~----------~~~~~--------------------~~~--------------------------------  194 (363)
                      |+|.+++...          .++..                    ..|                                
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            9999887542          00000                    000                                


Q ss_pred             -EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          195 -HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                       .......+++.|+|||.+....++.++|||||||++|||++ |..||......... ..+........+.    ..+..
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~  235 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL-EYLRKGYRLPKPE----YCPDE  235 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHHcCCCCCCCc----cCChH
Confidence             00112346788999999988899999999999999999999 69999876443322 2222222222222    23455


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +.+++.+||..+|.+|||+.++++.|+
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         236 LYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            999999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5e-28  Score=222.52  Aligned_cols=200  Identities=22%  Similarity=0.316  Sum_probs=147.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|++.+.||.|+||+||+|.. .++..||+|.+..... .....|.+|+.++.+++||||+++++++..+. .++|||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE-EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            46789999999999999999985 5689999999875433 33578999999999999999999999877665 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCceeE---------------EEee
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------~~~~  199 (363)
                      |+++|+|.+++....                                      +.......               ....
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT  162 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccce
Confidence            999999988764210                                      00000000               0112


Q ss_pred             cccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       200 ~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ..|++.|+|||++.     ...++.++|||||||++|||++|+.||............ .....+.+.  .+......+.
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~  239 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI-LKSEPPTLD--QPSKWSSSFN  239 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH-hcCCCCCcC--CcccCCHHHH
Confidence            35888999999985     345788999999999999999999999865433222221 111112211  1222334588


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHh
Q 048684          275 LIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +++..||+.+|.+||++.+++++-
T Consensus       240 ~li~~~l~~~p~~Rps~~~il~~~  263 (280)
T cd06611         240 DFLKSCLVKDPDDRPTAAELLKHP  263 (280)
T ss_pred             HHHHHHhccChhhCcCHHHHhcCh
Confidence            999999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.95  E-value=2.8e-28  Score=222.00  Aligned_cols=199  Identities=22%  Similarity=0.330  Sum_probs=148.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||.|+||.||++.. .+++.||+|.+...........+.+|+++++.++||||+++++++.... .++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            3677888999999999999985 4689999999987655555678999999999999999999999877665 8899999


Q ss_pred             cCCCChhhhhhhcc---------------------CCC--CceeE----------------E-------------Eeecc
Q 048684          174 SPHGSLASLLYAKW---------------------LPD--KWTHH----------------I-------------VSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---------------------~~~--~~~~~----------------~-------------~~~~~  201 (363)
                      +++++|.+++....                     +..  ...+.                +             .....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV  160 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence            99999998875210                     000  00000                0             00134


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch----hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ----KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      |+..|+|||++.+..++.++|||||||++|+|++|..||....    ..............+.+...   .....+.+++
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li  237 (265)
T cd06605         161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSG---KFSPDFQDFV  237 (265)
T ss_pred             CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChh---hcCHHHHHHH
Confidence            7889999999999999999999999999999999999997642    11111111112122222111   1445599999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..||..||.+|||+.+++.+
T Consensus       238 ~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         238 NLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHcCCCchhCcCHHHHhhC
Confidence            99999999999999999865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=5.5e-28  Score=249.33  Aligned_cols=199  Identities=19%  Similarity=0.354  Sum_probs=146.9

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      ...++|.+.+.||.|+||+||++.. .++..||+|.+.... .......|..|+.++..|+|||||++++++...   .+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            3447899999999999999999984 567899999987543 334467899999999999999999999976543   27


Q ss_pred             EEEEEccCCCChhhhhhhc------------------------cCCC--------CceeE--------------------
Q 048684          168 HLILELSPHGSLASLLYAK------------------------WLPD--------KWTHH--------------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~------------------------~~~~--------~~~~~--------------------  195 (363)
                      |||||||++|+|.++|...                        ++..        ...|.                    
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            8999999999998776310                        0000        00100                    


Q ss_pred             -------------E--------------EeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhh
Q 048684          196 -------------I--------------VSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKS  246 (363)
Q Consensus       196 -------------~--------------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~  246 (363)
                                   +              ....+||+.|+|||++.+  ..++.++||||||||||||+||..||......
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~  249 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF  249 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH
Confidence                         0              012358999999999964  45899999999999999999999999765433


Q ss_pred             HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 048684          247 LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      ......+.......+ ...+    ..+.+||..||+.+|..||++.+++.
T Consensus       250 ~qli~~lk~~p~lpi-~~~S----~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        250 SQLISELKRGPDLPI-KGKS----KELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHhcCCCCCc-CCCC----HHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            332233322221111 1223    44899999999999999999999985

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.9e-28  Score=223.59  Aligned_cols=197  Identities=24%  Similarity=0.431  Sum_probs=145.6

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC---CCCcceEEEEEEcCC-eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD---HPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .|+..+.||.|+||.||+|.. .+|..||||.+...........+.+|+.+++.++   ||||+++++++..+. .++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            477788999999999999984 6789999999876544444677889999999996   999999999887665 78999


Q ss_pred             EccCCCChhhhhhhccCCC------------------------------------CceeE---------------EEeec
Q 048684          172 ELSPHGSLASLLYAKWLPD------------------------------------KWTHH---------------IVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~~------------------------------------~~~~~---------------~~~~~  200 (363)
                      ||+++++|.+++....++.                                    .....               .....
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTF  161 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccc
Confidence            9999999988774221100                                    00000               01123


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .|+..|+|||++.++ .++.++|||||||++|+|++|..||.......... .......+.+...   .....+.+++..
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~i~~  237 (277)
T cd06917         162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-LIPKSKPPRLEDN---GYSKLLREFVAA  237 (277)
T ss_pred             cCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-ccccCCCCCCCcc---cCCHHHHHHHHH
Confidence            578889999998754 47899999999999999999999997654322211 1111122222221   133458999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+||++.+++.+
T Consensus       238 ~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         238 CLDEEPKERLSAEELLKS  255 (277)
T ss_pred             HcCCCcccCcCHHHHhhC
Confidence            999999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=1.2e-27  Score=222.76  Aligned_cols=201  Identities=23%  Similarity=0.397  Sum_probs=147.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEc--------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE--------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      .++|.+.+.||+|+||.||+|...        ++..||+|.+...........+.+|+.++..+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            467888899999999999999731        24579999987554444467899999999999 899999999988766


Q ss_pred             C-eEEEEEccCCCChhhhhhhccCC------------------------------------C-CceeE------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKWLP------------------------------------D-KWTHH------------  195 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~~------------------------------------~-~~~~~------------  195 (363)
                      . .++||||+++|+|.+++......                                    . ...|.            
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~  173 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN  173 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence            5 88999999999998887532100                                    0 00000            


Q ss_pred             ----E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          196 ----I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       196 ----~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                          +                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+........ .+
T Consensus       174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~  252 (304)
T cd05101         174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LL  252 (304)
T ss_pred             CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-HH
Confidence                0                 000124567999999998899999999999999999998 788887654433222 22


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ........+.    .....+.+++.+||+.+|..|||+.++++.|+.
T Consensus       253 ~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~  295 (304)
T cd05101         253 KEGHRMDKPA----NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR  295 (304)
T ss_pred             HcCCcCCCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            2222111222    233458999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=4.6e-28  Score=221.06  Aligned_cols=199  Identities=21%  Similarity=0.302  Sum_probs=143.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||.||+|.. .+++.||+|.+...... ....+.+|+.++..++||||+++++++...+ .++||||
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE-DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            4778888999999999999984 56899999998755433 2456889999999999999999999877655 8899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCCCceeEE---------------Eeecc
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPDKWTHHI---------------VSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~---------------~~~~~  201 (363)
                      +++|+|.+++....                                     +.......+               .....
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI  167 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccccc
Confidence            99999988763100                                     000000000               11235


Q ss_pred             cccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-cCCCCCCHHHHHHHHHHH
Q 048684          202 GTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-TLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       202 gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  277 (363)
                      |++.|+|||++.   ...++.++|||||||++|+|++|..||.........+........+ ....  .......+.+++
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li  245 (267)
T cd06645         168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD--KMKWSNSFHHFV  245 (267)
T ss_pred             CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc--cCCCCHHHHHHH
Confidence            889999999984   4568999999999999999999999986544322222221221111 1111  111234588999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||+.+|.+|||+.+|+++
T Consensus       246 ~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHccCCchhCcCHHHHhcC
Confidence            99999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=1.6e-27  Score=223.19  Aligned_cols=202  Identities=21%  Similarity=0.376  Sum_probs=147.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEc--------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE--------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      .++|...+.||+|+||.||++...        .+..||+|.+...........+.+|+.++..+ +||||+++++++...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            367888999999999999999741        24579999987654444467789999999999 699999999988766


Q ss_pred             C-eEEEEEccCCCChhhhhhhccC-----------------CC--------------------Ccee-------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKWL-----------------PD--------------------KWTH-------------  194 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~-----------------~~--------------------~~~~-------------  194 (363)
                      . .+++|||+++|+|.+++.....                 ..                    ...|             
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  170 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED  170 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence            5 8899999999999888743110                 00                    0000             


Q ss_pred             ---EE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          195 ---HI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       195 ---~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                         .+                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||........... +
T Consensus       171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~-~  249 (314)
T cd05099         171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL-L  249 (314)
T ss_pred             CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH-H
Confidence               00                 000113356999999999899999999999999999999 8999976544332222 1


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ........+...+    ..+.+++.+||+.+|.+|||+.++++.|...
T Consensus       250 ~~~~~~~~~~~~~----~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         250 REGHRMDKPSNCT----HELYMLMRECWHAVPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             HcCCCCCCCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            2211112222233    3488999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.1e-27  Score=213.56  Aligned_cols=193  Identities=25%  Similarity=0.407  Sum_probs=143.0

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChh
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA  180 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~  180 (363)
                      ++||.|+||.||++...+++.||+|.+...........|.+|+.++++++||||+++++++.+.. .++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            46999999999999976699999999876554444678999999999999999999999887665 89999999999998


Q ss_pred             hhhhhccC--------------------------------------CCCceeEEE-----------------eecccccC
Q 048684          181 SLLYAKWL--------------------------------------PDKWTHHIV-----------------SKIEGTFG  205 (363)
Q Consensus       181 ~~l~~~~~--------------------------------------~~~~~~~~~-----------------~~~~gt~~  205 (363)
                      +++.....                                      .......+.                 ....++..
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~  160 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK  160 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence            87742100                                      000000000                 00112456


Q ss_pred             CCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          206 YLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       206 y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      |+|||++.++.++.++|||||||++|||+| |..||......... ..+........    +...+..+.+++.+||..+
T Consensus       161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-ERIESGYRMPA----PQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-HHHhcCCCCCC----CccCCHHHHHHHHHHhccC
Confidence            999999998899999999999999999999 88888765432222 11221111112    2223445999999999999


Q ss_pred             CCCCCCHHHHHHHhh
Q 048684          285 SACRPQMSKVVQALR  299 (363)
Q Consensus       285 P~~RPt~~evl~~L~  299 (363)
                      |.+|||+.++++.|.
T Consensus       236 p~~Rp~~~ell~~l~  250 (251)
T cd05041         236 PENRPSFSEIYNELQ  250 (251)
T ss_pred             hhhCcCHHHHHHHhh
Confidence            999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=2.5e-27  Score=218.29  Aligned_cols=204  Identities=22%  Similarity=0.328  Sum_probs=142.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      .+|...+.||+|+||+||++..     .++..||||.+..... ...+.|.+|+.++..++||||+++++++...   ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            4788889999999999999974     2478999999875443 3357889999999999999999999976543   37


Q ss_pred             EEEEEccCCCChhhhhhhcc--CC------------------------------------CCceeEE-------------
Q 048684          168 HLILELSPHGSLASLLYAKW--LP------------------------------------DKWTHHI-------------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~~------------------------------------~~~~~~~-------------  196 (363)
                      ++||||+++|+|.+++....  ++                                    ......+             
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  162 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK  162 (284)
T ss_pred             EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence            89999999999998874211  00                                    0000000             


Q ss_pred             -----EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-----------HhhhhhcCCc
Q 048684          197 -----VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-----------SSMKELVDPT  260 (363)
Q Consensus       197 -----~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-----------~~~~~~~~~~  260 (363)
                           .....++..|+|||++.+..++.++|||||||++|||++|..|+..........           ..+.......
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05081         163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN  242 (284)
T ss_pred             cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence                 000112345999999998899999999999999999999987764332111000           0000101000


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....+......+.+++.+||+.+|..|||+.+|++.|+.
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            0001112233459999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.95  E-value=1.9e-27  Score=215.37  Aligned_cols=197  Identities=22%  Similarity=0.403  Sum_probs=146.6

Q ss_pred             CCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      +|...+.||+|+||.||+|... ++..||+|.+....    ..+..+.+.+|+.+++.++||||+++++++.... .+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3677789999999999999864 78999999986432    1234578999999999999999999999887765 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCceeE--------------EEee
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWTHH--------------IVSK  199 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~--------------~~~~  199 (363)
                      +||+++++|.+++....                                     +.......              ....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence            99999999988874210                                     00000000              0123


Q ss_pred             cccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..|++.|++||.+.... ++.++|+|||||++|+|++|+.||.........+........+..+...+    ..+.+++.
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~  236 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLS----DEAKDFIL  236 (258)
T ss_pred             cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcC----HHHHHHHH
Confidence            45788899999997776 89999999999999999999999976553332222222111222222333    44889999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.+|.+||++.+++.+
T Consensus       237 ~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         237 KCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHhhcCcccCcCHHHHhcC
Confidence            9999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.3e-27  Score=215.07  Aligned_cols=198  Identities=21%  Similarity=0.368  Sum_probs=148.5

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .++|+..+.||.|+||.||+|... |+.||||.+.....  ..+.+.+|+.+++.++|+||+++++++.+.. .++||||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            357888999999999999999875 88999999975543  3578999999999999999999999887544 8999999


Q ss_pred             cCCCChhhhhhhcc---CC------------------------------------CCceeEE------------Eeeccc
Q 048684          174 SPHGSLASLLYAKW---LP------------------------------------DKWTHHI------------VSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~~------------------------------------~~~~~~~------------~~~~~g  202 (363)
                      +++|+|.+++....   +.                                    ......+            .....+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~  161 (256)
T cd05039          82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL  161 (256)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence            99999998874211   00                                    0000000            001123


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      +..|+|||++..+.++.++|||||||++|||++ |..||.......... .+.....+..+...    +..+.+++.+||
T Consensus       162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~li~~~l  236 (256)
T cd05039         162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-HVEKGYRMEAPEGC----PPEVYKVMKDCW  236 (256)
T ss_pred             cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhcCCCCCCccCC----CHHHHHHHHHHh
Confidence            567999999998899999999999999999998 999997664433222 22221122222223    345899999999


Q ss_pred             ccCCCCCCCHHHHHHHhhc
Q 048684          282 NQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+|.+|||+.+++..|+.
T Consensus       237 ~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         237 ELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             ccChhhCcCHHHHHHHHhc
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=5.3e-28  Score=219.81  Aligned_cols=200  Identities=22%  Similarity=0.312  Sum_probs=149.6

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..++|.+.+.||.|+||+||+|...+++.||||.+......  ...+.+|+.++++++||||+++++++.... .++|||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS--PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC--HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            34689999999999999999999877888999998754432  467899999999999999999999887644 899999


Q ss_pred             ccCCCChhhhhhhcc---C------------------------------------CCCceeEEE----------------
Q 048684          173 LSPHGSLASLLYAKW---L------------------------------------PDKWTHHIV----------------  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---~------------------------------------~~~~~~~~~----------------  197 (363)
                      |+++++|.+++....   +                                    .......+.                
T Consensus        82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (261)
T cd05034          82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR  161 (261)
T ss_pred             ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence            999999988774210   0                                    000000000                


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....++..|+|||.+.+..++.++|||||||++|+|+| |+.||.+.......... ........+...    +..+.++
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~  236 (261)
T cd05034         162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV-ERGYRMPRPPNC----PEELYDL  236 (261)
T ss_pred             hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCC----CHHHHHH
Confidence            00113457999999998899999999999999999999 99999765543333222 222222222223    3458999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhhc
Q 048684          277 ASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+||+.+|.+||++.++++.|+.
T Consensus       237 i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         237 MLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHcccCcccCCCHHHHHHHHhc
Confidence            999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=3.1e-27  Score=215.51  Aligned_cols=196  Identities=21%  Similarity=0.424  Sum_probs=145.5

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch--------hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE--------EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      +|.....||.|+||.||+|.. .++..||+|.+......        ...+.+.+|+.++.+++||||+++++++.+.. 
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            367778999999999999984 56889999988643321        12356889999999999999999999887765 


Q ss_pred             eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeEE-------------
Q 048684          167 MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI-------------  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~-------------  196 (363)
                      .+++|||+++++|.+++....                                     +.......+             
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            789999999999988774110                                     000000000             


Q ss_pred             --------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHH
Q 048684          197 --------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (363)
                              .....|+..|+|||++.+..++.++|||||||++|+|++|+.||........... ......+.++...+  
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~--  237 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK-IGENASPEIPSNIS--  237 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH-HhccCCCcCCcccC--
Confidence                    0123478889999999988999999999999999999999999986543322222 12222333333333  


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        ..+.+++.+||+.||.+||++.+++++
T Consensus       238 --~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         238 --SEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             --HHHHHHHHHHccCCchhCcCHHHHhhC
Confidence              448999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.95  E-value=1.9e-27  Score=221.58  Aligned_cols=201  Identities=19%  Similarity=0.362  Sum_probs=146.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||+|+||.||+|.. .+|.    .||+|.+...........+.+|+.+++.++||||++++|++.....+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            5678889999999999999984 4454    4799988765544445578999999999999999999999987778899


Q ss_pred             EEccCCCChhhhhhhcc--C------------------------------C------CCceeEE----------------
Q 048684          171 LELSPHGSLASLLYAKW--L------------------------------P------DKWTHHI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~------------------------------~------~~~~~~~----------------  196 (363)
                      +||+++|+|.+++....  +                              +      ......+                
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  166 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY  166 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccccc
Confidence            99999999988764210  0                              0      0000000                


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....... ..+.....+......+    ..+.
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~  241 (303)
T cd05110         167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERLPQPPICT----IDVY  241 (303)
T ss_pred             ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCCCCCCCCCC----HHHH
Confidence             001124568999999998899999999999999999998 99999765332211 1111111111112233    3488


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++..||..+|..||++.++++.|...
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.95  E-value=2.4e-27  Score=215.11  Aligned_cols=196  Identities=21%  Similarity=0.369  Sum_probs=145.3

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~E~  173 (363)
                      .+|...+.||+|+||.||++... |..||+|.+....   ..+.|.+|+.+++.++|+||+++++++...  ..+++|||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            46888899999999999999875 7889999986433   246789999999999999999999975433  38899999


Q ss_pred             cCCCChhhhhhhccCC---C--------------------Ccee----------------EE------------Eeeccc
Q 048684          174 SPHGSLASLLYAKWLP---D--------------------KWTH----------------HI------------VSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~---~--------------------~~~~----------------~~------------~~~~~g  202 (363)
                      +++|+|.+++......   .                    ...|                .+            .....+
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  161 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  161 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence            9999999887521100   0                    0000                00            001124


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      +..|+|||++.+..++.++|||||||++|||++ |+.||........... +.....+......+    ..+.+++.+||
T Consensus       162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~li~~~l  236 (256)
T cd05082         162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCP----PVVYDVMKQCW  236 (256)
T ss_pred             ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HhcCCCCCCCCCCC----HHHHHHHHHHh
Confidence            557999999998899999999999999999998 9999976543322222 11222222223333    44899999999


Q ss_pred             ccCCCCCCCHHHHHHHhhc
Q 048684          282 NQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+|.+|||+.++++.|+.
T Consensus       237 ~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         237 HLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             cCChhhCcCHHHHHHHHhc
Confidence            9999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=3.7e-27  Score=215.54  Aligned_cols=198  Identities=23%  Similarity=0.354  Sum_probs=141.8

Q ss_pred             CccCCcccccCceEEEEEEEcC-Cc--EEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------C
Q 048684           98 FSHENLIGQGGYAEVYKGQLED-GQ--FVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------G  166 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~~-g~--~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------~  166 (363)
                      |.+.++||+|+||.||+|...+ +.  .||||.+.... .......|.+|+.++..++||||+++++++...       .
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3466889999999999998643 43  58999987543 334467899999999999999999999987432       2


Q ss_pred             eEEEEEccCCCChhhhhhhccC-------------------------------------------CCCceeEE-------
Q 048684          167 MHLILELSPHGSLASLLYAKWL-------------------------------------------PDKWTHHI-------  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------~~~~~~~~-------  196 (363)
                      .+++|||+++|+|.+++.....                                           .......+       
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            5799999999999876521000                                           00000000       


Q ss_pred             ----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCC
Q 048684          197 ----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAY  265 (363)
Q Consensus       197 ----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (363)
                                .....+++.|++||++.+..++.++|||||||++|||++ |..||....... .+..+.....+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~-  238 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-IYDYLRQGNRLKQPPD-  238 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCCCCCCCC-
Confidence                      001124567999999999999999999999999999999 889997654332 2222222211112222 


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                         ....+.+++.+||+.||.+|||+.++++.|+.
T Consensus       239 ---~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         239 ---CLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             ---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               33448999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=2.2e-27  Score=217.17  Aligned_cols=192  Identities=22%  Similarity=0.309  Sum_probs=135.9

Q ss_pred             cccccCceEEEEEEEcCC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCC
Q 048684          103 LIGQGGYAEVYKGQLEDG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGS  178 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~~~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gs  178 (363)
                      .||+|+||+||+|...++   ..+++|.+...........|.+|+.+++.++||||+++++++.... .++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            699999999999975333   3567787765544445678999999999999999999999888665 799999999999


Q ss_pred             hhhhhhhccC-----------------------------------C------CCceeE-----------------EEeec
Q 048684          179 LASLLYAKWL-----------------------------------P------DKWTHH-----------------IVSKI  200 (363)
Q Consensus       179 L~~~l~~~~~-----------------------------------~------~~~~~~-----------------~~~~~  200 (363)
                      |.+++.....                                   +      ......                 .....
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  161 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDK  161 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCC
Confidence            9887742100                                   0      000000                 00122


Q ss_pred             ccccCCCCchhhcc-------CCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhh----hcCCcCCCCCCHH
Q 048684          201 EGTFGYLPPEFFMH-------GIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKE----LVDPTLGDAYNTE  268 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  268 (363)
                      +|++.|+|||++..       ..++.++|||||||++|||++ |..||............+.+    ..++.+...++  
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (268)
T cd05086         162 CVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS--  239 (268)
T ss_pred             cCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc--
Confidence            46788999999853       245789999999999999997 56788654433222222222    22333333334  


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                        ..+.+++..|| .+|.+||++.+|++.|.
T Consensus       240 --~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         240 --ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             --HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence              44888999999 67999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.95  E-value=2.1e-27  Score=214.98  Aligned_cols=196  Identities=21%  Similarity=0.385  Sum_probs=147.5

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||+|+||.||++.. .++..+|||.+.... .......+.+|+.+++.++||||+++++++...+ .++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477889999999999999984 568899999987543 2334678999999999999999999999776555 8999999


Q ss_pred             cCCCChhhhhhhcc---------------------------------------CC-CCceeEE--------------Eee
Q 048684          174 SPHGSLASLLYAKW---------------------------------------LP-DKWTHHI--------------VSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---------------------------------------~~-~~~~~~~--------------~~~  199 (363)
                      +++++|.+++....                                       +. ......+              ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT  160 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence            99999988874210                                       00 0000000              012


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|+..|+|||++.+..++.++|||||||++|+|++|+.||................. ..+....+.    .+.+++..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~l~~li~~  235 (256)
T cd08220         161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF-APISDRYSP----DLRQLILS  235 (256)
T ss_pred             cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-CCCCCCcCH----HHHHHHHH
Confidence            3578899999999988899999999999999999999999987654333222222211 222233333    48999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.+|.+|||+.+++++
T Consensus       236 ~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         236 MLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HccCChhhCCCHHHHhhC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.95  E-value=9.8e-28  Score=221.90  Aligned_cols=207  Identities=24%  Similarity=0.356  Sum_probs=150.2

Q ss_pred             cCHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 048684           86 FALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGV  163 (363)
Q Consensus        86 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~  163 (363)
                      +++.++..++++|...+.||+|+||.||++.. .+|+.+|+|.+.....  ....+.+|+.++.++ +||||+++++++.
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~   89 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFY   89 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence            45566777889999999999999999999985 5689999999865432  235677899999999 7999999999876


Q ss_pred             cC------CeEEEEEccCCCChhhhhhhc-----cC------------------------------------CCCceeEE
Q 048684          164 EG------GMHLILELSPHGSLASLLYAK-----WL------------------------------------PDKWTHHI  196 (363)
Q Consensus       164 ~~------~~~lv~E~~~~gsL~~~l~~~-----~~------------------------------------~~~~~~~~  196 (363)
                      ..      ..++||||+++|+|.+++...     .+                                    .......+
T Consensus        90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639          90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEE
Confidence            42      278999999999998776310     00                                    00000000


Q ss_pred             ---------------EeecccccCCCCchhhccC-----CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh
Q 048684          197 ---------------VSKIEGTFGYLPPEFFMHG-----IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL  256 (363)
Q Consensus       197 ---------------~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~  256 (363)
                                     .....|+..|+|||++...     .++.++|||||||++|||++|+.||............ ...
T Consensus       170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~-~~~  248 (291)
T cd06639         170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI-PRN  248 (291)
T ss_pred             eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH-hcC
Confidence                           1123478889999998644     3689999999999999999999999765432222221 111


Q ss_pred             cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+.+.  .+......+.+++.+||+.+|.+||++.+++++
T Consensus       249 ~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         249 PPPTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             CCCCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            111111  122334558999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1.4e-27  Score=219.49  Aligned_cols=206  Identities=21%  Similarity=0.318  Sum_probs=146.4

Q ss_pred             CCCccCCcccccCceEEEEEEEc-----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc--C-Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE--G-GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~-~~  167 (363)
                      ..|...+.||+|+||.||+|.+.     ++..||||.+...........|.+|+.+++.++||||+++++++..  . ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            35777789999999999999853     3688999999765543345789999999999999999999998876  2 27


Q ss_pred             EEEEEccCCCChhhhhhhcc--CC------------------------------------CCceeEE-------------
Q 048684          168 HLILELSPHGSLASLLYAKW--LP------------------------------------DKWTHHI-------------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~~------------------------------------~~~~~~~-------------  196 (363)
                      ++||||+++|+|.+++....  +.                                    ......+             
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK  163 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence            89999999999988874211  00                                    0000000             


Q ss_pred             -----EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH----------HHhhhhhcCCcC
Q 048684          197 -----VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM----------WSSMKELVDPTL  261 (363)
Q Consensus       197 -----~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~----------~~~~~~~~~~~~  261 (363)
                           .....++..|++||++.+..++.++|||||||++|||+||..|+.........          ...+...+....
T Consensus       164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd05038         164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE  243 (284)
T ss_pred             cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC
Confidence                 00112345699999999889999999999999999999999998654222110          011111111111


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ....+......+.+++.+||+.+|..|||+.+|+++|+..
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         244 RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            1111222335599999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=7.5e-28  Score=220.39  Aligned_cols=194  Identities=23%  Similarity=0.417  Sum_probs=140.8

Q ss_pred             CcccccCceEEEEEEEc-CCc--EEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQLE-DGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~-~g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||+|... +|.  .+|+|.+...........+.+|+.++.++ +||||+++++++.... .++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            36999999999999863 444  47889887544444456899999999999 7999999999887765 8899999999


Q ss_pred             CChhhhhhhccC-----------------CC--------------------CceeE----------------EE------
Q 048684          177 GSLASLLYAKWL-----------------PD--------------------KWTHH----------------IV------  197 (363)
Q Consensus       177 gsL~~~l~~~~~-----------------~~--------------------~~~~~----------------~~------  197 (363)
                      |+|.+++.....                 +.                    ...|.                +.      
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            999888743110                 00                    00000                00      


Q ss_pred             ------ee--cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHH
Q 048684          198 ------SK--IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       198 ------~~--~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (363)
                            ..  ...++.|+|||++....++.++|||||||++|||+| |..||......... ..+..........    .
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~----~  235 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-EKLPQGYRLEKPL----N  235 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-HHHhCCCCCCCCC----c
Confidence                  00  112456999999988899999999999999999997 99999765433222 2222211111222    2


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ....+.+++.+||+.+|.+|||+.+++..|..
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            33458899999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=1.4e-27  Score=219.92  Aligned_cols=198  Identities=23%  Similarity=0.334  Sum_probs=143.6

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      |+..+.||.|+||.||+|.. .++..+|+|.+..... .....+.+|+.+++.++||||+++++++...+ .++||||++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH-HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            56778899999999999985 4588899999865443 34678899999999999999999999877665 889999999


Q ss_pred             CCChhhhhhhcc--C------------------------------CCC------cee---------------EEEeeccc
Q 048684          176 HGSLASLLYAKW--L------------------------------PDK------WTH---------------HIVSKIEG  202 (363)
Q Consensus       176 ~gsL~~~l~~~~--~------------------------------~~~------~~~---------------~~~~~~~g  202 (363)
                      +|+|..++....  +                              +..      ...               .......|
T Consensus        86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  165 (282)
T cd06643          86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG  165 (282)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccc
Confidence            999987653110  0                              000      000               00112357


Q ss_pred             ccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       203 t~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ++.|+|||++.     +..++.++|||||||++|||++|++||............... ..+...  .+......+.+++
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~li  242 (282)
T cd06643         166 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EPPTLA--QPSRWSSEFKDFL  242 (282)
T ss_pred             cccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc-CCCCCC--CccccCHHHHHHH
Confidence            88999999984     345788999999999999999999999765433222222111 111111  1222334589999


Q ss_pred             HHccccCCCCCCCHHHHHHHhh
Q 048684          278 SACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..||+.||.+||++.+++++-.
T Consensus       243 ~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         243 KKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             HHHccCChhhCcCHHHHhcCCC
Confidence            9999999999999999987543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=3.1e-27  Score=214.53  Aligned_cols=196  Identities=22%  Similarity=0.348  Sum_probs=147.2

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv~  171 (363)
                      +|+..+.||.|+||.||++. ..+|..||+|.+.... .......+..|+.+++.++||||+++++++...   ..+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            47788999999999999998 4578999999987543 344456789999999999999999999977542   278999


Q ss_pred             EccCCCChhhhhhhc------------------------cCC------CCceeE----------------E---------
Q 048684          172 ELSPHGSLASLLYAK------------------------WLP------DKWTHH----------------I---------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~------------------------~~~------~~~~~~----------------~---------  196 (363)
                      ||+++|+|.+++...                        .+.      ....+.                +         
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999998776421                        011      011110                0         


Q ss_pred             ------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          197 ------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       197 ------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                            .....|++.|+|||++.+..++.++||||||+++|+|++|..||......... ..+.....+.+    +....
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~----~~~~~  235 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA-SKIKEGKFRRI----PYRYS  235 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH-HHHhcCCCCCC----ccccC
Confidence                  11235788999999999888999999999999999999999999876532222 22222222222    22344


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+.+++.+||+.+|.+||++.+|+++
T Consensus       236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         236 SELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            559999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.8e-28  Score=221.22  Aligned_cols=200  Identities=25%  Similarity=0.382  Sum_probs=145.8

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC----
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG----  166 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----  166 (363)
                      .++++|+..+.||.|+||.||+|.. .+++.||+|.+......  ...+.+|+.+++++ +|+||+++++++....    
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE--EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchh--HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            4568999999999999999999985 46889999998755432  46789999999999 6999999999886533    


Q ss_pred             ---eEEEEEccCCCChhhhhhhcc-----CC------------------------------------CCceeEE------
Q 048684          167 ---MHLILELSPHGSLASLLYAKW-----LP------------------------------------DKWTHHI------  196 (363)
Q Consensus       167 ---~~lv~E~~~~gsL~~~l~~~~-----~~------------------------------------~~~~~~~------  196 (363)
                         .++||||+++++|.+++....     +.                                    ......+      
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence               689999999999987764210     00                                    0000000      


Q ss_pred             ---------EeecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          197 ---------VSKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       197 ---------~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                               .....|++.|+|||++..     ..++.++|||||||++|+|+||..||............. ....+.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~  239 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP-RNPPPTLK  239 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhh-ccCCCCCC
Confidence                     012347888999999853     347889999999999999999999997543322222221 11112211


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .+......+.+++.+||..||.+|||+.+++++
T Consensus       240 --~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         240 --SPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             --chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence              122345569999999999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=1.8e-27  Score=215.64  Aligned_cols=196  Identities=19%  Similarity=0.322  Sum_probs=146.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv~E  172 (363)
                      +|+..+.||.|+||.||++.. .+++.||+|.+.... .....+.+.+|+.++++++||||+++++++....  .+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            478889999999999999984 558899999986543 2334567889999999999999999998765333  789999


Q ss_pred             ccCCCChhhhhhhcc---C------------------------------CC------CceeE---------------EEe
Q 048684          173 LSPHGSLASLLYAKW---L------------------------------PD------KWTHH---------------IVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---~------------------------------~~------~~~~~---------------~~~  198 (363)
                      |+++++|.+++....   +                              +.      .....               ...
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            999999988774210   0                              00      00000               011


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...|++.|+|||++.+..++.++|||||||++|+|++|+.||...+............. +.++.    .....+.+++.
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~li~  235 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-PPMPK----DYSPELGELIA  235 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCcc----ccCHHHHHHHH
Confidence            23578899999999999999999999999999999999999986654433333322222 22222    33445999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.+|..|||+.+++.+
T Consensus       236 ~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         236 TMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHhccCcccCCCHHHHhcC
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=1.7e-27  Score=217.41  Aligned_cols=193  Identities=25%  Similarity=0.449  Sum_probs=141.0

Q ss_pred             CcccccCceEEEEEEEcC-------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684          102 NLIGQGGYAEVYKGQLED-------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~-------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.||+|+||.||+|...+       +..||||.+...........|.+|+.+++.++||||+++++++.... .++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            369999999999998532       25799999876544444678999999999999999999999887655 8999999


Q ss_pred             cCCCChhhhhhhccC--------------------------------------C------CCc-----eeEEE-------
Q 048684          174 SPHGSLASLLYAKWL--------------------------------------P------DKW-----THHIV-------  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~--------------------------------------~------~~~-----~~~~~-------  197 (363)
                      +++|+|.+++.....                                      +      ...     ...+.       
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            999999887742100                                      0      000     00000       


Q ss_pred             ----------eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCC
Q 048684          198 ----------SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYN  266 (363)
Q Consensus       198 ----------~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (363)
                                ....++..|+|||++.++.++.++|||||||++|||+| |..||......... ..+........    +
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~-~~~~~~~~~~~----~  235 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL-QHVTAGGRLQK----P  235 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHH-HHHhcCCccCC----c
Confidence                      00123567999999999999999999999999999998 99999765432222 11111111111    2


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...+..+.+++.+||..+|.+||++.++++.|.
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            223455899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=2.4e-27  Score=219.50  Aligned_cols=198  Identities=21%  Similarity=0.360  Sum_probs=144.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.|++.+.||.|+||.||+|.. .+|..||+|.+..... .....+.+|+.+++.++||||+++++++.... .++||||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            5788999999999999999985 5589999999875543 34678999999999999999999999766544 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCc---------eeE------EEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKW---------THH------IVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~---------~~~------~~~~~  200 (363)
                      +++|+|..++....                                      +....         ...      .....
T Consensus        91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  170 (292)
T cd06644          91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSF  170 (292)
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccccee
Confidence            99999876653100                                      00000         000      01123


Q ss_pred             ccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       201 ~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .|++.|+|||++.     ...++.++|||||||++|||++|.+||........... ......+...  .+......+.+
T Consensus       171 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~  247 (292)
T cd06644         171 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPPTLS--QPSKWSMEFRD  247 (292)
T ss_pred             cCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH-HhcCCCccCC--CCcccCHHHHH
Confidence            4778999999985     34578899999999999999999999976543222211 1111111111  12223345889


Q ss_pred             HHHHccccCCCCCCCHHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ++.+||+.+|.+||++.+++++
T Consensus       248 li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         248 FLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHhcCCcccCcCHHHHhcC
Confidence            9999999999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=3.5e-27  Score=214.35  Aligned_cols=199  Identities=25%  Similarity=0.390  Sum_probs=150.8

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||.|+||.||++... +|+.||||.+...........+.+|+.++.+++||||+++++++..+. .++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            46888899999999999999854 599999999976554344678999999999999999999999887765 8999999


Q ss_pred             cCCCChhhhhhhc--------------------cCCC--CceeE----------------E---------------Eeec
Q 048684          174 SPHGSLASLLYAK--------------------WLPD--KWTHH----------------I---------------VSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~--------------------~~~~--~~~~~----------------~---------------~~~~  200 (363)
                      +++++|.+++...                    .+..  ...|.                +               ....
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  160 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF  160 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence            9999999887521                    0011  00000                0               0123


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch--hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ--KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .|+..|+|||.+.+..++.++||||||+++|+|+||..||....  ........+.....+.....   ..+..+.+++.
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~  237 (264)
T cd06623         161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAE---EFSPEFRDFIS  237 (264)
T ss_pred             eecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcc---cCCHHHHHHHH
Confidence            47788999999999999999999999999999999999997664  22222222222222222222   13445999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      .||+.+|..||++.+++++
T Consensus       238 ~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         238 ACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHccCChhhCCCHHHHHhC
Confidence            9999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=2.7e-27  Score=215.89  Aligned_cols=197  Identities=16%  Similarity=0.245  Sum_probs=144.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      .+|...+.||+|+||.||+|.. .+|..||||.+....    .......+.+|+.++.+++||||+++++++.+.   .+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4788899999999999999985 568999999885322    123356788999999999999999999987653   27


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE---------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------------  195 (363)
                      +++|||+++|+|.+++....                                     +.......               
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            79999999999998874110                                     00000000               


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                         ......|+..|+|||++.+..++.++|||||||++|||++|+.||..................+    ..+......
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  237 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP----VLPPHVSDH  237 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC----CCchhhCHH
Confidence               0112357889999999988889999999999999999999999997653332222222111112    233444556


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHH
Q 048684          273 LLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+++.+||. +|..||++.+|+++
T Consensus       238 ~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         238 CRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             HHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            8889999984 99999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=2.2e-28  Score=227.27  Aligned_cols=199  Identities=18%  Similarity=0.269  Sum_probs=148.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..+|...+.||+|+||.||+|.. .+|+.||+|.+....... ...+.+|+.+++.++||||+++++++..+. .++|||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            36789999999999999999984 679999999997544332 467889999999999999999999887665 889999


Q ss_pred             ccCCCChhhhhhhccCC------------------------------------CCceeE---------------EEeecc
Q 048684          173 LSPHGSLASLLYAKWLP------------------------------------DKWTHH---------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~------------------------------------~~~~~~---------------~~~~~~  201 (363)
                      |+++|+|.+++....++                                    ......               ......
T Consensus        97 ~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  176 (297)
T cd06656          97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  176 (297)
T ss_pred             ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCccc
Confidence            99999998876421100                                    000000               011235


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |++.|+|||.+.+..++.++|||||||++|+|++|+.||............... ..+.  ...+......+.+++.+||
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~li~~~l  253 (297)
T cd06656         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE--LQNPERLSAVFRDFLNRCL  253 (297)
T ss_pred             CCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCCC--CCCccccCHHHHHHHHHHc
Confidence            788999999999988999999999999999999999999765432111111111 1111  1122333455889999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      ..+|..||++.+++++
T Consensus       254 ~~~p~~Rps~~~il~~  269 (297)
T cd06656         254 EMDVDRRGSAKELLQH  269 (297)
T ss_pred             cCChhhCcCHHHHhcC
Confidence            9999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.95  E-value=1.8e-27  Score=223.82  Aligned_cols=190  Identities=18%  Similarity=0.260  Sum_probs=137.1

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELG-IIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||+|.. .+|+.||||.+....  .......+..|.. ++..++||||+++++++...+ .++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4699999999999985 579999999986432  1122345666655 457799999999999877665 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence            99987664110                                     000000               00112346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||................  ..+....    ...+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~----~~~~~~li~~~l~~~  234 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP--LRLKPNI----SVSARHLLEGLLQKD  234 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCC----CHHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999998765433332222221  1222223    344899999999999


Q ss_pred             CCCCCCHH----HHHHH
Q 048684          285 SACRPQMS----KVVQA  297 (363)
Q Consensus       285 P~~RPt~~----evl~~  297 (363)
                      |.+||++.    +++++
T Consensus       235 p~~R~~~~~~~~~il~~  251 (323)
T cd05575         235 RTKRLGAKDDFLEIKNH  251 (323)
T ss_pred             HHhCCCCCCCHHHHHcC
Confidence            99999984    66553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=1.2e-27  Score=220.86  Aligned_cols=201  Identities=18%  Similarity=0.309  Sum_probs=150.6

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ..++.|+....||+|+||.||+|... ++..||+|.+.....  ....+.+|+.+++.++|+||+++++++.... .++|
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence            45677888999999999999999864 688999999976543  3567889999999999999999999877655 8999


Q ss_pred             EEccCCCChhhhhhhcc--CCCC------------------------------------ceeEEE---------------
Q 048684          171 LELSPHGSLASLLYAKW--LPDK------------------------------------WTHHIV---------------  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~~~~------------------------------------~~~~~~---------------  197 (363)
                      +||+++++|.+++....  ++..                                    ....+.               
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  173 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR  173 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh
Confidence            99999999998876331  1100                                    000000               


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ....|++.|++||++.+..++.++|||||||++|+|++|+.||.................. ...  ........+.+++
T Consensus       174 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li  250 (286)
T cd06614         174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLK--NPEKWSPEFKDFL  250 (286)
T ss_pred             ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCc--chhhCCHHHHHHH
Confidence            1123678899999998888999999999999999999999999865443322222221111 111  1112345589999


Q ss_pred             HHccccCCCCCCCHHHHHHHh
Q 048684          278 SACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+||+.+|..|||+.+++.+.
T Consensus       251 ~~~l~~~p~~Rpt~~~il~~~  271 (286)
T cd06614         251 NKCLVKDPEKRPSAEELLQHP  271 (286)
T ss_pred             HHHhccChhhCcCHHHHhhCh
Confidence            999999999999999999743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=1.6e-27  Score=220.20  Aligned_cols=198  Identities=19%  Similarity=0.289  Sum_probs=142.7

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      |...+.||+|+||+||+|.. .+|+.||+|.+.....  ......+.+|+.++..++|+||+.+++++..++ .++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56678899999999999984 5789999999865432  222356789999999999999999998776655 8899999


Q ss_pred             cCCCChhhhhhhcc---C------------------------------------CCCceeE--------------EEeec
Q 048684          174 SPHGSLASLLYAKW---L------------------------------------PDKWTHH--------------IVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---~------------------------------------~~~~~~~--------------~~~~~  200 (363)
                      +++|+|.+++....   +                                    .......              .....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR  161 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence            99999987663110   0                                    0000000              01224


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      .|++.|+|||++.+..++.++|||||||++|||++|..||....................  ..++......+.+|+..|
T Consensus       162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~  239 (285)
T cd05632         162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKFSEEAKSICKML  239 (285)
T ss_pred             CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccCCHHHHHHHHHH
Confidence            589999999999988999999999999999999999999986543222111111111111  112223344588999999


Q ss_pred             cccCCCCCCC-----HHHHHHH
Q 048684          281 INQTSACRPQ-----MSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt-----~~evl~~  297 (363)
                      |+.||.+||+     +.+++.+
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         240 LTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             ccCCHhHcCCCcccChHHHHcC
Confidence            9999999999     6666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=4.7e-28  Score=222.48  Aligned_cols=188  Identities=20%  Similarity=0.327  Sum_probs=134.7

Q ss_pred             cccccCceEEEEEEEcC-------------------------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcce
Q 048684          103 LIGQGGYAEVYKGQLED-------------------------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK  157 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~~~-------------------------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~  157 (363)
                      +||+|+||.||+|.+..                         ...||+|.+..... .....|.+|+.+++.++||||++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   80 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF   80 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence            69999999999997421                         13589998865432 23467889999999999999999


Q ss_pred             EEEEEEcCC-eEEEEEccCCCChhhhhhhcc--C------------------------------CCCcee----------
Q 048684          158 MIGYGVEGG-MHLILELSPHGSLASLLYAKW--L------------------------------PDKWTH----------  194 (363)
Q Consensus       158 l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~--~------------------------------~~~~~~----------  194 (363)
                      +++++.+.. .++||||+++|+|..++....  +                              +.....          
T Consensus        81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~  160 (274)
T cd05076          81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS  160 (274)
T ss_pred             EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence            999988766 789999999999988774210  0                              000000          


Q ss_pred             ---EE-----------EeecccccCCCCchhhcc-CCCCccceEEechhHHHHHH-hCCCCCCCchhhHHHHHhhhhhcC
Q 048684          195 ---HI-----------VSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEII-TGRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       195 ---~~-----------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~ell-tG~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                         .+           .....++..|+|||++.+ ..++.++|||||||++|||+ +|..||........... ...  .
T Consensus       161 ~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~--~  237 (274)
T cd05076         161 PFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEK--K  237 (274)
T ss_pred             ceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHh--c
Confidence               00           011236788999999875 56899999999999999985 79999976543322111 111  1


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..++....    ..+.+++..||+.+|.+|||+.+|++.|
T Consensus       238 ~~~~~~~~----~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         238 HRLPEPSC----KELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             cCCCCCCC----hHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            11112222    3488999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=1.5e-27  Score=216.06  Aligned_cols=196  Identities=19%  Similarity=0.364  Sum_probs=146.4

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||.|+||.||+|.. .+|..||+|.+.... .......+.+|+.+++.++|+||+++++++.... .++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            477888999999999999985 568899999986532 1223467889999999999999999999877665 8999999


Q ss_pred             cCCCChhhhhhhcc---------------------------------------CCCC-ceeEE---------------Ee
Q 048684          174 SPHGSLASLLYAKW---------------------------------------LPDK-WTHHI---------------VS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---------------------------------------~~~~-~~~~~---------------~~  198 (363)
                      +++++|.+++....                                       +... ....+               ..
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            99999988764210                                       0000 00000               11


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...|++.|+|||++.+..++.++|||||||++|||++|..||..................+ .....+    ..+.+++.
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~i~  235 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP-ISPNFS----RDLRSLIS  235 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC-CCCCCC----HHHHHHHH
Confidence            2247888999999988889999999999999999999999998654433333333322222 112223    44999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||..+|.+|||+.+++++
T Consensus       236 ~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         236 QLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHhccChhhCcCHHHHhhC
Confidence            9999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=2.4e-27  Score=214.92  Aligned_cols=196  Identities=22%  Similarity=0.424  Sum_probs=147.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSP  175 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~  175 (363)
                      ++|.+.+.||+|+||.||+|.. +++.||+|.+....   ....+.+|+.++..++||||+++++++.....++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCC
Confidence            4588889999999999999975 57889999986432   2467899999999999999999999988888999999999


Q ss_pred             CCChhhhhhhccC---CC--------------------Ccee----------------EE------------Eeeccccc
Q 048684          176 HGSLASLLYAKWL---PD--------------------KWTH----------------HI------------VSKIEGTF  204 (363)
Q Consensus       176 ~gsL~~~l~~~~~---~~--------------------~~~~----------------~~------------~~~~~gt~  204 (363)
                      +|+|.+++.....   +.                    ...|                .+            ......+.
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (254)
T cd05083          82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV  161 (254)
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCc
Confidence            9999888752110   00                    0000                00            00112345


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      .|+|||++.++.++.++|||||||++|||++ |+.||............ .....+......+    ..+.+++.+||+.
T Consensus       162 ~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~li~~~l~~  236 (254)
T cd05083         162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECV-EKGYRMEPPEGCP----ADVYVLMTSCWET  236 (254)
T ss_pred             eecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-hCCCCCCCCCcCC----HHHHHHHHHHcCC
Confidence            6999999998899999999999999999998 99999766543322222 2222222222233    4488999999999


Q ss_pred             CCCCCCCHHHHHHHhhc
Q 048684          284 TSACRPQMSKVVQALRG  300 (363)
Q Consensus       284 dP~~RPt~~evl~~L~~  300 (363)
                      +|..||++.+++..|+.
T Consensus       237 ~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         237 EPKKRPSFHKLREKLEK  253 (254)
T ss_pred             ChhhCcCHHHHHHHHcc
Confidence            99999999999998854

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=1.9e-27  Score=226.85  Aligned_cols=203  Identities=17%  Similarity=0.218  Sum_probs=143.0

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||+|+||.||++.. .+|..||||.+.... .......+.+|+.++..++||||+++++++...       
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            47899999999999999999984 568999999986542 233456788999999999999999999987543       


Q ss_pred             CeEEEEEccCCCChhhhhh-----------------------hcc------------CCCCcee--------------EE
Q 048684          166 GMHLILELSPHGSLASLLY-----------------------AKW------------LPDKWTH--------------HI  196 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~-----------------------~~~------------~~~~~~~--------------~~  196 (363)
                      ..++||||+.+ +|...+.                       ...            +......              ..
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence            26899999986 4444321                       000            0000000              01


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh-------------------hhc
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK-------------------ELV  257 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~-------------------~~~  257 (363)
                      .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.+.... |..+.                   ...
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVIEQLGTPSAEFMNRLQPTVRNYV  257 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence            1234688999999999999999999999999999999999999986532111 11000                   000


Q ss_pred             --CCcCCC----------------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          258 --DPTLGD----------------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       258 --~~~~~~----------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                        .+....                .........+.+++.+||+.||.+|||+.|++++-+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         258 ENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             hhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence              000000                001112345889999999999999999999998643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-29  Score=235.62  Aligned_cols=204  Identities=19%  Similarity=0.276  Sum_probs=149.4

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC--eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG--MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~lv  170 (363)
                      -++|...++||.|+||.||+|+ ..+|..||||.++..--.-..-.=++|+..|++|+ |||||+|.....+.+  +|+|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            3578888999999999999998 67899999999975432211123358999999999 999999999777655  8999


Q ss_pred             EEccCCCChhhhhhhcc---------------------------C-----CCCce------eE--------------EEe
Q 048684          171 LELSPHGSLASLLYAKW---------------------------L-----PDKWT------HH--------------IVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---------------------------~-----~~~~~------~~--------------~~~  198 (363)
                      ||||+. +|..++..+.                           +     |+...      ..              ..+
T Consensus        89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT  167 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT  167 (538)
T ss_pred             HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcc
Confidence            999986 8887775221                           0     11000      00              012


Q ss_pred             ecccccCCCCchhhc-cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----------------
Q 048684          199 KIEGTFGYLPPEFFM-HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----------------  260 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----------------  260 (363)
                      ..+.|.+|.|||++. .+.|+.+.||||+|||++|+.+-++-|.+.+.....|++..-+-.|.                 
T Consensus       168 eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~  247 (538)
T KOG0661|consen  168 EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFR  247 (538)
T ss_pred             hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccC
Confidence            235899999999985 56799999999999999999999999998876666665322111111                 


Q ss_pred             ---CCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          261 ---LGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       261 ---~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         ..+.    .-+..+.++.+++..|+..||.+|||+.|++++--
T Consensus       248 ~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf  293 (538)
T KOG0661|consen  248 FPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF  293 (538)
T ss_pred             CCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence               1000    01124567999999999999999999999998644

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.95  E-value=6.5e-27  Score=212.73  Aligned_cols=198  Identities=21%  Similarity=0.397  Sum_probs=146.5

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||+|+||.||+|.. .+++.||+|.+..... ......+..|+.+++.++|+||+++++++...+ .++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            477789999999999999985 5689999999875543 235678999999999999999999999877665 8899999


Q ss_pred             cCCCChhhhhhhcc-C------------------------------------CCCceeEE-------------------E
Q 048684          174 SPHGSLASLLYAKW-L------------------------------------PDKWTHHI-------------------V  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-~------------------------------------~~~~~~~~-------------------~  197 (363)
                      +++++|.+++.... +                                    .......+                   .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence            99999998874210 0                                    00000000                   0


Q ss_pred             eecccccCCCCchhhccCC---CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGI---ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ....|++.|+|||++.+..   ++.++|||||||++|+|++|+.||............+.....+.++...  .....+.
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  238 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSL--QLSPEGK  238 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCccc--ccCHHHH
Confidence            1235678999999998776   8999999999999999999999997653222211112222222222221  1244588


Q ss_pred             HHHHHccccCCCCCCCHHHHHH
Q 048684          275 LIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~  296 (363)
                      +++..||+.+|.+|||+.+++.
T Consensus       239 ~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         239 DFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHccCCcccCCCHHHHhc
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.5e-28  Score=225.51  Aligned_cols=201  Identities=19%  Similarity=0.309  Sum_probs=158.0

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchh-HHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .+-|+..+.||+|.|..|-+++ .-+|..||||++.+...+. ....+.+|+..|+-++|||||+||.+..... +|||+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            3567888899999999999998 4679999999998765432 3467889999999999999999999776554 99999


Q ss_pred             EccCCCChhhhhhh--------------------------------ccCCCCcee---------------------EEEe
Q 048684          172 ELSPHGSLASLLYA--------------------------------KWLPDKWTH---------------------HIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~--------------------------------~~~~~~~~~---------------------~~~~  198 (363)
                      |.-.+|+|++||-.                                ...|+....                     .-+.
T Consensus        97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~  176 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT  176 (864)
T ss_pred             EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence            99999999999841                                011111111                     1234


Q ss_pred             ecccccCCCCchhhccCCCC-ccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIAD-EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ..||++.|-|||++.+..|+ +++||||||||||-|++|++||...+.....-.++...+      ..+...+.++.+||
T Consensus       177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY------tvPshvS~eCrdLI  250 (864)
T KOG4717|consen  177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY------TVPSHVSKECRDLI  250 (864)
T ss_pred             cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc------cCchhhhHHHHHHH
Confidence            56899999999999999886 789999999999999999999987665544433333222      24556677799999


Q ss_pred             HHccccCCCCCCCHHHHHH--HhhcC
Q 048684          278 SACINQTSACRPQMSKVVQ--ALRGD  301 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~--~L~~~  301 (363)
                      ..||..||.+|.+..+|+.  +|+..
T Consensus       251 ~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             HHHHhcCchhhccHHHHhccccccCC
Confidence            9999999999999999986  45443

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=4.2e-28  Score=225.01  Aligned_cols=199  Identities=19%  Similarity=0.302  Sum_probs=147.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|...+.||+|+||.||+|.. .++..||+|.+...... ....+.+|+.+++.++||||+++++++...+ .++|+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            36888999999999999999984 56889999998644332 2467899999999999999999999877655 899999


Q ss_pred             ccCCCChhhhhhhccCCC------------------------------------CceeEE---------------Eeecc
Q 048684          173 LSPHGSLASLLYAKWLPD------------------------------------KWTHHI---------------VSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~~------------------------------------~~~~~~---------------~~~~~  201 (363)
                      |+++|+|.+++....++.                                    .....+               .....
T Consensus        97 ~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~  176 (293)
T cd06647          97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  176 (293)
T ss_pred             cCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccccc
Confidence            999999988764211100                                    000000               11234


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |++.|+|||++....++.++|||||||++|+|++|+.||................ .+..  ..+......+.+++..||
T Consensus       177 ~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~li~~~l  253 (293)
T cd06647         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPEL--QNPEKLSAIFRDFLNRCL  253 (293)
T ss_pred             CChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC-CCCC--CCccccCHHHHHHHHHHc
Confidence            7788999999988889999999999999999999999997654322111111111 1111  112233455889999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.+|.+||++.+++.+
T Consensus       254 ~~~p~~Rp~~~~il~h  269 (293)
T cd06647         254 EMDVEKRGSAKELLQH  269 (293)
T ss_pred             cCChhhCcCHHHHhcC
Confidence            9999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=5.3e-27  Score=221.07  Aligned_cols=191  Identities=19%  Similarity=0.248  Sum_probs=138.3

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||+|.. .+++.||||.+....  .......+..|+.++.++ +||||+.+++++.... .++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999985 568899999997543  223356688999999888 6999999999877655 8999999999


Q ss_pred             CChhhhhhhc-------------------------c------------CCCCc---------e------eEEEeeccccc
Q 048684          177 GSLASLLYAK-------------------------W------------LPDKW---------T------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~-------------------------~------------~~~~~---------~------~~~~~~~~gt~  204 (363)
                      |+|..++...                         .            +....         .      .......+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence            9997765310                         0            00000         0      01122356999


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch------hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ------KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||....      .....+..+... ...++...+    ..+.+++.
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~----~~~~~li~  235 (327)
T cd05617         161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-PIRIPRFLS----VKASHVLK  235 (327)
T ss_pred             ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC-CCCCCCCCC----HHHHHHHH
Confidence            9999999999999999999999999999999999996421      111122222211 112222233    44889999


Q ss_pred             HccccCCCCCCCH------HHHHHH
Q 048684          279 ACINQTSACRPQM------SKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~------~evl~~  297 (363)
                      +||+.||.+|+++      .+++++
T Consensus       236 ~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         236 GFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             HHhccCHHHcCCCCCCCCHHHHHcC
Confidence            9999999999984      577664

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.95  E-value=1.7e-27  Score=224.13  Aligned_cols=189  Identities=18%  Similarity=0.255  Sum_probs=139.5

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +|+..+.||+|+||+||+|.. .+|+.||||.+....  .......+..|+.++..+. |++|+++++++...+ .|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467788999999999999984 568999999987532  2233467888999998886 577888988776655 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCcee---------------EEEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~  199 (363)
                      ||+++|+|.+++....                                     +......               .....
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            9999999987764100                                     0000000               01123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||+||+.||.+..............  ...+.    .....+.+++.+
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~p~----~~~~~~~~li~~  234 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPK----SLSKEAVSICKG  234 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCc----cCCHHHHHHHHH
Confidence            458999999999999999999999999999999999999998765543333332221  12222    233458899999


Q ss_pred             ccccCCCCCCCH
Q 048684          280 CINQTSACRPQM  291 (363)
Q Consensus       280 cl~~dP~~RPt~  291 (363)
                      ||+.+|.+|++.
T Consensus       235 ~l~~~p~~R~~~  246 (323)
T cd05615         235 LMTKHPSKRLGC  246 (323)
T ss_pred             HcccCHhhCCCC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.95  E-value=2.8e-27  Score=222.32  Aligned_cols=185  Identities=19%  Similarity=0.259  Sum_probs=133.9

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELG-IIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||.||+|.. .+|+.||+|.+....  .......+..|+. ++..++|||||++++++.+.+ .++|||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999985 568999999986432  1222345666655 578899999999999877665 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence            99977653110                                     000000               00112346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|..||...+............  ..++.    .....+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~~~----~~~~~~~~li~~~l~~~  234 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP--LQLPG----GKTVAACDLLVGLLHKD  234 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC--CCCCC----CCCHHHHHHHHHHccCC
Confidence            9999999999899999999999999999999999998765443332222221  12222    23345889999999999


Q ss_pred             CCCCCCHH
Q 048684          285 SACRPQMS  292 (363)
Q Consensus       285 P~~RPt~~  292 (363)
                      |.+||++.
T Consensus       235 p~~R~~~~  242 (321)
T cd05603         235 QRRRLGAK  242 (321)
T ss_pred             HhhcCCCC
Confidence            99999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=2.1e-27  Score=243.93  Aligned_cols=201  Identities=26%  Similarity=0.341  Sum_probs=146.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.++||+|+||.||+|.. .+|+.||||.+....  .....+.|.+|+.++++++|||||++++++.+++ .++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5789999999999999999985 568999999997543  2334567999999999999999999999887766 89999


Q ss_pred             EccCCCChhhhhhhcc------------------------------------------CCCC------c---------ee
Q 048684          172 ELSPHGSLASLLYAKW------------------------------------------LPDK------W---------TH  194 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~------------------------------------------~~~~------~---------~~  194 (363)
                      ||++||+|.+++....                                          .+..      .         ..
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            9999999987663100                                          0000      0         00


Q ss_pred             E------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH
Q 048684          195 H------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW  250 (363)
Q Consensus       195 ~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~  250 (363)
                      .                        ....++||+.|||||++.+..++.++|||||||++|||+||+.||..........
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~  241 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY  241 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh
Confidence            0                        0012469999999999999999999999999999999999999997654332222


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHHHhh
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ-MSKVVQALR  299 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~L~  299 (363)
                      ..  ....+... ......+..+.+++.+||+.||.+||+ +.++++.|+
T Consensus       242 ~~--~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le  288 (932)
T PRK13184        242 RD--VILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE  288 (932)
T ss_pred             hh--hccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11  11111100 001123345889999999999999965 555655554

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=3.6e-27  Score=221.97  Aligned_cols=188  Identities=18%  Similarity=0.237  Sum_probs=134.7

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELG-IIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      +.||+|+||+||+|.. .+++.||+|.+.....  ......+..|.. ++..++||||+++++++...+ .++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3699999999999985 4678999999864321  122334555554 567789999999999877665 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCcee---------------EEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWTH---------------HIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~~---------------~~~~~~~gt~  204 (363)
                      |+|.+++....                                     +......               ......+||+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            99987764110                                     0000000               0112346999


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|.+||.................  ....    .....+.+++.+||+.|
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--~~~~----~~~~~~~~li~~~l~~~  234 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--QLKP----NITNSARHLLEGLLQKD  234 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc--CCCC----CCCHHHHHHHHHHcccC
Confidence            99999999999999999999999999999999999987654333222222211  1122    23345899999999999


Q ss_pred             CCCCCCHHHHH
Q 048684          285 SACRPQMSKVV  295 (363)
Q Consensus       285 P~~RPt~~evl  295 (363)
                      |.+||++.+.+
T Consensus       235 p~~R~~~~~~~  245 (325)
T cd05602         235 RTKRLGAKDDF  245 (325)
T ss_pred             HHHCCCCCCCH
Confidence            99999987433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.6e-27  Score=219.45  Aligned_cols=198  Identities=20%  Similarity=0.300  Sum_probs=148.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE--EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||+||+|.. .+|+.||+|.+......  ...+.+..|++++..++||||+++++++.... .++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            3688889999999999999985 45899999999765432  24567899999999999999999999887666 89999


Q ss_pred             EccCCCChhhhhhhc---cC------------------------------------CCCceeE-----------------
Q 048684          172 ELSPHGSLASLLYAK---WL------------------------------------PDKWTHH-----------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~---~~------------------------------------~~~~~~~-----------------  195 (363)
                      ||+.+++|.+++...   .+                                    .......                 
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            999999998876411   00                                    0000000                 


Q ss_pred             ---------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH
Q 048684          196 ---------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV  248 (363)
Q Consensus       196 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~  248 (363)
                                                 ......||..|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  240 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET  240 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence                                       00123578889999999998999999999999999999999999987655443


Q ss_pred             HHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC----HHHHHHH
Q 048684          249 MWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQ----MSKVVQA  297 (363)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~evl~~  297 (363)
                      .........  ....  .......+.+++.+||+.||.+|||    +.+++.+
T Consensus       241 ~~~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         241 FSNILKKEV--TFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHHhcCCc--cCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            333222211  1111  1113456999999999999999999    7777764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.95  E-value=2.6e-27  Score=214.28  Aligned_cols=196  Identities=27%  Similarity=0.438  Sum_probs=145.3

Q ss_pred             CccCCcccccCceEEEEEEEcC-C----cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           98 FSHENLIGQGGYAEVYKGQLED-G----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~~-g----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      |.+.+.||.|+||.||++.... +    ..||+|.+...........+..|+.++..++|+||+++++++.+.. .+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            3566889999999999998543 3    8899999976655435678999999999999999999999887755 89999


Q ss_pred             EccCCCChhhhhhhcc---CCC--------------------Ccee----------------EEE---------------
Q 048684          172 ELSPHGSLASLLYAKW---LPD--------------------KWTH----------------HIV---------------  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---~~~--------------------~~~~----------------~~~---------------  197 (363)
                      ||+++++|.+++....   ++.                    ...+                .+.               
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK  160 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence            9999999988875211   000                    0000                000               


Q ss_pred             -eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          198 -SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       198 -~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                       ....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||............... ..+.....    .+..+.+
T Consensus       161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~  235 (258)
T smart00219      161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-YRLPKPEN----CPPEIYK  235 (258)
T ss_pred             cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCc----CCHHHHH
Confidence             01125678999999988889999999999999999999 88888765443332222221 11222222    3445899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHh
Q 048684          276 IASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ++.+||..||.+|||+.++++.|
T Consensus       236 ~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      236 LMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHCcCChhhCcCHHHHHhhC
Confidence            99999999999999999999764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.95  E-value=4.5e-27  Score=219.40  Aligned_cols=201  Identities=21%  Similarity=0.343  Sum_probs=144.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...|...+.||+|+||+||+|.. .+|+.||+|.+....  .......+.+|+.+++.++||||+++++++.+.+ .++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            35688889999999999999985 568999999986432  2334567899999999999999999999887765 7899


Q ss_pred             EEccCCCChhhhhhhc--------------------------c------------CCCCceeEE-----------Eeecc
Q 048684          171 LELSPHGSLASLLYAK--------------------------W------------LPDKWTHHI-----------VSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~--------------------------~------------~~~~~~~~~-----------~~~~~  201 (363)
                      |||+. |+|.+++...                          .            +.......+           .....
T Consensus        94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~  172 (307)
T cd06607          94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV  172 (307)
T ss_pred             HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence            99998 4665544210                          0            000000000           01234


Q ss_pred             cccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          202 GTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       202 gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      |++.|+|||++.   ...++.++|||||||++|||+||++||............... ..+.+   ........+.+++.
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~li~  248 (307)
T cd06607         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTL---SSNDWSDYFRNFVD  248 (307)
T ss_pred             CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-CCCCC---CchhhCHHHHHHHH
Confidence            788999999884   456899999999999999999999999865543332222111 11111   12234456999999


Q ss_pred             HccccCCCCCCCHHHHHHHhhc
Q 048684          279 ACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +||+.+|..||++.+|+.+...
T Consensus       249 ~~l~~~p~~Rp~~~~il~~~~~  270 (307)
T cd06607         249 SCLQKIPQDRPSSEELLKHRFV  270 (307)
T ss_pred             HHhcCChhhCcCHHHHhcChhh
Confidence            9999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=5.1e-27  Score=221.59  Aligned_cols=203  Identities=18%  Similarity=0.187  Sum_probs=144.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||+||++.. .+++.||+|.+....  .......+..|+.++..++|+||+++++++.+.+ .|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4788999999999999999985 568899999986422  1223456888999999999999999999887666 89999


Q ss_pred             EccCCCChhhhhhhc--cCC------------------------------------CCceeE----------------EE
Q 048684          172 ELSPHGSLASLLYAK--WLP------------------------------------DKWTHH----------------IV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--~~~------------------------------------~~~~~~----------------~~  197 (363)
                      ||+++|+|.+++...  .++                                    ......                ..
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            999999999887421  000                                    000000                01


Q ss_pred             eecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ...+||+.|+|||++.+     +.++.++|||||||++|||++|+.||....................++.. ....+..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~~~~~  239 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH-ITDVSEE  239 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCc-cccCCHH
Confidence            12469999999999875     56889999999999999999999999876543333222222111111111 1123455


Q ss_pred             HHHHHHHccccCCCC--CCCHHHHHHHhh
Q 048684          273 LLLIASACINQTSAC--RPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~dP~~--RPt~~evl~~L~  299 (363)
                      +.+++.+|+..++.+  |+++.+++++..
T Consensus       240 ~~~li~~ll~~~~~~~~~~~~~~~~~h~~  268 (331)
T cd05624         240 AKDLIQRLICSRERRLGQNGIEDFKKHAF  268 (331)
T ss_pred             HHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence            888999988765544  568999987643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=1.5e-27  Score=216.93  Aligned_cols=189  Identities=19%  Similarity=0.334  Sum_probs=134.8

Q ss_pred             CcccccCceEEEEEEEc-CC-------cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684          102 NLIGQGGYAEVYKGQLE-DG-------QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~-~g-------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      +.||.|+||+||+|... .+       ..||+|.+.... ......|..|+.++..++|||||++++++..+. .++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   79 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE   79 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence            36999999999999752 22       348888876433 233567889999999999999999999887644 899999


Q ss_pred             ccCCCChhhhhhhccC--------------------------------CCCce--------------eEE----------
Q 048684          173 LSPHGSLASLLYAKWL--------------------------------PDKWT--------------HHI----------  196 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~--------------------------------~~~~~--------------~~~----------  196 (363)
                      |+++|+|.+++.....                                +....              ..+          
T Consensus        80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            9999999888752100                                00000              000          


Q ss_pred             -EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCC-CCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGR-QALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                       .....|++.|+|||++.+. .++.++|||||||++|||++|. .||......... .....  ...++...+    ..+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~----~~~  232 (258)
T cd05078         160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYED--RHQLPAPKW----TEL  232 (258)
T ss_pred             CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHc--cccCCCCCc----HHH
Confidence             0123578899999999864 5899999999999999999995 565543322211 11111  122222233    348


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHh
Q 048684          274 LLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+++..||+.||.+|||+.++++.|
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHhc
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=3.5e-27  Score=220.35  Aligned_cols=202  Identities=17%  Similarity=0.244  Sum_probs=142.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||+|.. .++..||||.+...........+.+|+.++++++||||+++++++..++ .++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            5688899999999999999985 4688999999875543333456889999999999999999999887655 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCcee---------------EEEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTH---------------HIVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~---------------~~~~~~  200 (363)
                      +++ +|.+++....                                      +......               ......
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  164 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNE  164 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccc
Confidence            985 6766553100                                      0000000               001123


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-----------------c---CC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-----------------V---DP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-----------------~---~~  259 (363)
                      .||+.|+|||++.+ ..++.++|||||||++|||+||++||.+..............                 .   .+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (309)
T cd07872         165 VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFP  244 (309)
T ss_pred             cccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcC
Confidence            57889999999865 468999999999999999999999997654322211111100                 0   00


Q ss_pred             cCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          260 TLGD----AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       260 ~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ....    .........+.+++.+||+.||.+|||+.+++++-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  287 (309)
T cd07872         245 KYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA  287 (309)
T ss_pred             ccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence            0000    00012234588999999999999999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.7e-27  Score=221.27  Aligned_cols=203  Identities=19%  Similarity=0.207  Sum_probs=141.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||++.. .+++.||||.+....  .......|.+|+.++..++|+||+++++++.+++ .++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4788899999999999999985 568999999986421  2223456889999999999999999999877665 89999


Q ss_pred             EccCCCChhhhhhhc--cC------------------------------------CCCceeEE----------------E
Q 048684          172 ELSPHGSLASLLYAK--WL------------------------------------PDKWTHHI----------------V  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--~~------------------------------------~~~~~~~~----------------~  197 (363)
                      ||+++|+|.+++...  .+                                    .......+                .
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            999999998887420  00                                    00000000                0


Q ss_pred             eecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ...+||+.|+|||++..     ..++.++|||||||++|||++|+.||....................++.. ....+..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~  239 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPD-VTDVSEE  239 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCc-cCCCCHH
Confidence            11358999999999963     45789999999999999999999999865433322222211111111111 1113344


Q ss_pred             HHHHHHHcccc--CCCCCCCHHHHHHHhh
Q 048684          273 LLLIASACINQ--TSACRPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~--dP~~RPt~~evl~~L~  299 (363)
                      +.+++.+|+..  ++..||++.+++++-.
T Consensus       240 ~~~li~~ll~~~~~r~~r~~~~~~l~hp~  268 (331)
T cd05597         240 AKDLIRRLICSPETRLGRNGLQDFKDHPF  268 (331)
T ss_pred             HHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence            77888887654  4444889999998744

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=2.3e-27  Score=232.22  Aligned_cols=200  Identities=17%  Similarity=0.274  Sum_probs=138.1

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      ...+|...++||+|+||.||+|.. .+++.||||.+....     ....+|+.+|+.++|||||++++++...       
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence            346799999999999999999985 568999999886432     2334799999999999999999865321       


Q ss_pred             C--eEEEEEccCCCChhhhhhh-----------------------------cc------------CC-CCceeEE-----
Q 048684          166 G--MHLILELSPHGSLASLLYA-----------------------------KW------------LP-DKWTHHI-----  196 (363)
Q Consensus       166 ~--~~lv~E~~~~gsL~~~l~~-----------------------------~~------------~~-~~~~~~~-----  196 (363)
                      .  +++||||+++ +|.+++..                             ..            +. ......+     
T Consensus       139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence            1  5689999985 55444320                             00            00 0000000     


Q ss_pred             ---------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC--------
Q 048684          197 ---------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD--------  258 (363)
Q Consensus       197 ---------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~--------  258 (363)
                               ....+||+.|+|||++.+. .++.++|||||||++|||+||.+||.+..........+.....        
T Consensus       218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  297 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE  297 (440)
T ss_pred             chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence                     1123578999999998764 6999999999999999999999999876433222221111000        


Q ss_pred             --C-----cCCC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 --P-----TLGD--------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 --~-----~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                        +     .++.        .++...+..+.+|+.+||+.||.+|||+.+++.+-.
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~  353 (440)
T PTZ00036        298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF  353 (440)
T ss_pred             hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence              0     0000        011122356899999999999999999999997543

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=3.7e-27  Score=226.00  Aligned_cols=202  Identities=14%  Similarity=0.170  Sum_probs=140.7

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------CeE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------GMH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~  168 (363)
                      +|+..+.||+|+||+||++.. .+|+.||||.+.... .....+.+.+|+.+++.++||||+++++++...      ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478889999999999999984 579999999986432 223356788999999999999999999987654      368


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------c------------CCCCcee----------------E
Q 048684          169 LILELSPHGSLASLLYAK-------------------------W------------LPDKWTH----------------H  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------~------------~~~~~~~----------------~  195 (363)
                      +||||+. ++|.+++...                         .            +......                .
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~  159 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK  159 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence            9999997 4665554210                         0            0000000                0


Q ss_pred             EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh--------------------
Q 048684          196 IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK--------------------  254 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~--------------------  254 (363)
                      ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+............                    
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  239 (372)
T cd07853         160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH  239 (372)
T ss_pred             cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence            01123578899999999774 489999999999999999999999976543221111000                    


Q ss_pred             ---hhcC-CcCCC--CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          255 ---ELVD-PTLGD--AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       255 ---~~~~-~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         .... +....  .........+.+++.+||+.||.+|||+.+++.+-.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  290 (372)
T cd07853         240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY  290 (372)
T ss_pred             HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence               0000 00000  011122445889999999999999999999998643

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.95  E-value=6.2e-27  Score=218.27  Aligned_cols=199  Identities=18%  Similarity=0.236  Sum_probs=146.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||.||++.. .+++.||+|.+.....  ......+.+|+.++..++||||+++++++..+. .++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4688899999999999999985 5588999999875432  233567889999999999999999999877665 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeEE------------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI------------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~------------------  196 (363)
                      ||+++|+|.+++....                                     +.......+                  
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            9999999988874110                                     000000000                  


Q ss_pred             ------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-cCCcCCC
Q 048684          197 ------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-VDPTLGD  263 (363)
Q Consensus       197 ------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-~~~~~~~  263 (363)
                                  .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.............. ..+....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE  240 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccc
Confidence                        011346788999999998899999999999999999999999998665443333332221 1222212


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          264 AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+    ..+.+++.+||+.||.+||++.++.+.|
T Consensus       241 ~~~----~~~~~li~~~l~~~P~~R~~~~~~~~ll  271 (305)
T cd05609         241 ALP----ADAQDLISRLLRQNPLERLGTGGAFEVK  271 (305)
T ss_pred             cCC----HHHHHHHHHHhccChhhccCccCHHHHH
Confidence            233    4489999999999999999965444444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=5.6e-27  Score=213.76  Aligned_cols=197  Identities=19%  Similarity=0.399  Sum_probs=146.3

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-----EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      +|+..+.||+|+||.||+|. ..+|..||+|.+.....     ......+.+|+.++++++||||+++++++.+++ .++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            47788999999999999998 46789999999864321     223567899999999999999999999887766 789


Q ss_pred             EEEccCCCChhhhhhhc-------------------------------------cC-CCCceeEE---------------
Q 048684          170 ILELSPHGSLASLLYAK-------------------------------------WL-PDKWTHHI---------------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~-------------------------------------~~-~~~~~~~~---------------  196 (363)
                      ||||+++++|.+++...                                     .+ .......+               
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            99999999998877410                                     00 00000000               


Q ss_pred             ----EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH---HHHhhhhhcCCcCCCCCCHHH
Q 048684          197 ----VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV---MWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       197 ----~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  269 (363)
                          .....|+..|+|||++.+..++.++|||||||++|+|++|..||........   ..........+.    .+...
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  236 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPS----IPEHL  236 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCC----Cchhh
Confidence                0123578899999999888899999999999999999999999975432111   111111122222    33344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...+.+++.+||..+|..|||+.+++++
T Consensus       237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         237 SPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            4569999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=6.4e-28  Score=239.62  Aligned_cols=197  Identities=23%  Similarity=0.320  Sum_probs=147.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCC-cEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEE-EEEc----C---
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDG-QFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIG-YGVE----G---  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g-~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~-~~~~----~---  165 (363)
                      -++.+.+.|.+|||+.||.+....+ ..||+|++... .+...+.+.+||++|+.|. |+|||.+++ ....    +   
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            4567788999999999999996554 99999999766 5566888999999999997 999999999 3221    1   


Q ss_pred             CeEEEEEccCCCChhhhhhhcc---C----------------------CCCceeEEEe------------ec--------
Q 048684          166 GMHLILELSPHGSLASLLYAKW---L----------------------PDKWTHHIVS------------KI--------  200 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~---~----------------------~~~~~~~~~~------------~~--------  200 (363)
                      ++.|+||||.||+|-|++..+.   +                      .....|+-+.            .+        
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence            1568899999999999986210   1                      1111111000            00        


Q ss_pred             --------------------ccccCCCCchhh---ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc
Q 048684          201 --------------------EGTFGYLPPEFF---MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       201 --------------------~gt~~y~aPE~~---~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                          --|+.|.|||++   .+...++|+|||+|||+||-|+....||+.....        .++
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------aIl  267 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------AIL  267 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------eEE
Confidence                                158889999988   4667999999999999999999999999865321        122


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +....-...+.++..+.+||..||+.||.+||++-||+..+...
T Consensus       268 ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  268 NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence            22221112346777799999999999999999999999876543

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=5.8e-27  Score=216.83  Aligned_cols=196  Identities=19%  Similarity=0.282  Sum_probs=146.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....  .......+.+|++++++++||||+++++++.++. .++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4688889999999999999985 568999999986432  2233567889999999999999999999887766 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeEE------------Eeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI------------VSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~------------~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +.......+            ....+|
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  160 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG  160 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence            9999999988874110                                     000000000            123458


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      ++.|+|||.+.+...+.++||||||+++|+|++|+.||...............  ...++...    ...+.+++.+||.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~----~~~l~~li~~~l~  234 (290)
T cd05580         161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KVRFPSFF----SPDAKDLIRNLLQ  234 (290)
T ss_pred             CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CccCCccC----CHHHHHHHHHHcc
Confidence            89999999998888999999999999999999999999766532222222211  12222333    3458999999999


Q ss_pred             cCCCCCC-----CHHHHHHH
Q 048684          283 QTSACRP-----QMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RP-----t~~evl~~  297 (363)
                      .||.+|+     ++.+++++
T Consensus       235 ~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         235 VDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             CCHHHccCcccCCHHHHHcC
Confidence            9999999     77888764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=1.1e-26  Score=217.79  Aligned_cols=199  Identities=19%  Similarity=0.294  Sum_probs=143.9

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|...+.||+|+||.||+|.. .+|..||+|.+....  ..+....+.+|+.+++.++|||+|++++++.++. .++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            367778999999999999984 568999999986432  2334567899999999999999999999887766 789999


Q ss_pred             ccCCCChhhhhhhccC--------------------------------C------CCceeE-----------EEeecccc
Q 048684          173 LSPHGSLASLLYAKWL--------------------------------P------DKWTHH-----------IVSKIEGT  203 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~--------------------------------~------~~~~~~-----------~~~~~~gt  203 (363)
                      |+++ +|.+++.....                                +      ......           ......|+
T Consensus       106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  184 (317)
T cd06635         106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT  184 (317)
T ss_pred             CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence            9974 66665531100                                0      000000           01123578


Q ss_pred             cCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          204 FGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       204 ~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +.|+|||++.   .+.++.++|||||||++|||++|+.||..................+..    .......+.+++.+|
T Consensus       185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~  260 (317)
T cd06635         185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ----SNEWSDYFRNFVDSC  260 (317)
T ss_pred             ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC----CccccHHHHHHHHHH
Confidence            8999999984   456899999999999999999999999765433332222222221111    122334589999999


Q ss_pred             cccCCCCCCCHHHHHHHhhc
Q 048684          281 INQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L~~  300 (363)
                      |+.+|.+||++.++++++..
T Consensus       261 l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         261 LQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             ccCCcccCcCHHHHHhChhh
Confidence            99999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.95  E-value=4.4e-27  Score=221.41  Aligned_cols=186  Identities=18%  Similarity=0.234  Sum_probs=134.7

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELG-IIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ++||+|+||+||+|.. .+|+.||||++....  .......+..|.. +++.++||||+++++++...+ .++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999984 579999999986432  1223455666665 467799999999999777655 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            99977663110                                     000000               00112346899


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|..||.................  .+....    ...+.+++..|++.+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~ll~~ll~~~  234 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL--VLRPGA----SLTAWSILEELLEKD  234 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc--cCCCCC----CHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999987654433333322211  111222    344889999999999


Q ss_pred             CCCCCCHHH
Q 048684          285 SACRPQMSK  293 (363)
Q Consensus       285 P~~RPt~~e  293 (363)
                      |.+||++.+
T Consensus       235 p~~R~~~~~  243 (325)
T cd05604         235 RQRRLGAKE  243 (325)
T ss_pred             HHhcCCCCC
Confidence            999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=7e-27  Score=220.72  Aligned_cols=202  Identities=19%  Similarity=0.197  Sum_probs=142.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...++||+|+||+||++.. .+++.||+|.+....  .......|..|+.++..++|+||+++++++.+.+ .++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4688899999999999999985 457899999986421  1223445889999999999999999999877665 89999


Q ss_pred             EccCCCChhhhhhhc--cCC------------------------------------CCceeE----------------EE
Q 048684          172 ELSPHGSLASLLYAK--WLP------------------------------------DKWTHH----------------IV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--~~~------------------------------------~~~~~~----------------~~  197 (363)
                      ||+++|+|.+++...  .++                                    ......                ..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            999999999888421  000                                    000000                01


Q ss_pred             eecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ...+||+.|+|||++.     ...++.++|||||||++|||++|+.||.....................+. ........
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~s~~  239 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA-QVTDVSED  239 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC-ccccCCHH
Confidence            1246999999999986     34689999999999999999999999987654443333322221111111 11123445


Q ss_pred             HHHHHHHccccCC--CCCCCHHHHHHHh
Q 048684          273 LLLIASACINQTS--ACRPQMSKVVQAL  298 (363)
Q Consensus       273 l~~li~~cl~~dP--~~RPt~~evl~~L  298 (363)
                      +.+++.+|+..++  ..|+++.+++++-
T Consensus       240 ~~~li~~ll~~~~~r~~r~~~~~~~~h~  267 (332)
T cd05623         240 AKDLIRRLICSREHRLGQNGIEDFKQHP  267 (332)
T ss_pred             HHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence            8888888775544  4478999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=3e-27  Score=219.88  Aligned_cols=202  Identities=18%  Similarity=0.237  Sum_probs=141.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||.|+||.||+|.. .++..||+|.+...........+.+|+.++..++||||+++++++.... .++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            5688899999999999999985 4688999999875443333456789999999999999999999887665 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCceeE---------------EEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------IVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------~~~~~  200 (363)
                      ++ ++|.+++....                                      +.......               .....
T Consensus        86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  164 (301)
T cd07873          86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNE  164 (301)
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccccc
Confidence            98 47776653110                                      00000000               00112


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-----------------C---C
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-----------------D---P  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-----------------~---~  259 (363)
                      .+++.|+|||++.+. .++.++|||||||++|||+||++||...+.............                 .   +
T Consensus       165 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (301)
T cd07873         165 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYP  244 (301)
T ss_pred             ceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccC
Confidence            468889999998654 588999999999999999999999976543221111100000                 0   0


Q ss_pred             cCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          260 TLGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       260 ~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .....    ........+.+|+.+||+.||.+|||+.+++++-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~  287 (301)
T cd07873         245 KYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP  287 (301)
T ss_pred             ccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            00000    0011234588999999999999999999999853

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=7.9e-28  Score=223.63  Aligned_cols=196  Identities=16%  Similarity=0.247  Sum_probs=143.6

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      |+....||.|+||.||++.. .+++.||||.+...... ....+.+|+.++..++||||+++++++..++ .++||||++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~  101 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ  101 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc-hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence            44455799999999999984 56899999998654332 2467889999999999999999999776655 899999999


Q ss_pred             CCChhhhhhhccCCC------------------------------------CceeE---------------EEeeccccc
Q 048684          176 HGSLASLLYAKWLPD------------------------------------KWTHH---------------IVSKIEGTF  204 (363)
Q Consensus       176 ~gsL~~~l~~~~~~~------------------------------------~~~~~---------------~~~~~~gt~  204 (363)
                      +++|..++....+..                                    .....               ......|++
T Consensus       102 ~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~  181 (297)
T cd06659         102 GGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP  181 (297)
T ss_pred             CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence            999987764211100                                    00000               011245888


Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      .|+|||++.+..++.++|||||||++|||++|+.||........... +.....+...  ........+.+++..||+.+
T Consensus       182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~  258 (297)
T cd06659         182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLK--NAHKISPVLRDFLERMLTRE  258 (297)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccCCCCcc--ccCCCCHHHHHHHHHHhcCC
Confidence            99999999988999999999999999999999999976543322222 1111111111  11122344889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 048684          285 SACRPQMSKVVQA  297 (363)
Q Consensus       285 P~~RPt~~evl~~  297 (363)
                      |.+||++.+++++
T Consensus       259 P~~Rps~~~ll~~  271 (297)
T cd06659         259 PQERATAQELLDH  271 (297)
T ss_pred             cccCcCHHHHhhC
Confidence            9999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=1.1e-26  Score=219.32  Aligned_cols=201  Identities=22%  Similarity=0.373  Sum_probs=147.4

Q ss_pred             CCCccCCcccccCceEEEEEEEc--------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE--------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      .+|.+.+.||+|+||.||++...        .+..||+|.+...........+.+|+.++.++ +||||+++++++...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            46888999999999999999732        12368999887554444567899999999999 7999999999887666


Q ss_pred             -eEEEEEccCCCChhhhhhhccC------------CC-------------------------Ccee--------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL------------PD-------------------------KWTH--------------  194 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~------------~~-------------------------~~~~--------------  194 (363)
                       .+++|||+++|+|.+++.....            +.                         ...|              
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~  171 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence             8899999999999988753110            00                         0000              


Q ss_pred             --EE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhh
Q 048684          195 --HI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMK  254 (363)
Q Consensus       195 --~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~  254 (363)
                        .+                 .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+.......... .
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~  250 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL-K  250 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H
Confidence              00                 000113456999999999999999999999999999999 88999766543332222 1


Q ss_pred             hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ....+......    ...+.+++.+||+.+|.+|||+.+++..|+..
T Consensus       251 ~~~~~~~~~~~----~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~  293 (334)
T cd05100         251 EGHRMDKPANC----THELYMIMRECWHAVPSQRPTFKQLVEDLDRV  293 (334)
T ss_pred             cCCCCCCCCCC----CHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            11111222223    34588999999999999999999999988644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=4.3e-27  Score=226.87  Aligned_cols=196  Identities=17%  Similarity=0.158  Sum_probs=138.3

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|.+.+.||+|+||.||++. ..+++.||||...       ...+.+|+.++++++|||||++++++..+. .++|||
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            3679999999999999999998 4678999999753       235678999999999999999999877655 789999


Q ss_pred             ccCCCChhhhhhhc-------------------------------cCC------CCc----------------eeEEEee
Q 048684          173 LSPHGSLASLLYAK-------------------------------WLP------DKW----------------THHIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------~~~------~~~----------------~~~~~~~  199 (363)
                      ++. ++|..++...                               ..+      ...                .......
T Consensus       164 ~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~  242 (391)
T PHA03212        164 RYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG  242 (391)
T ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence            986 5776655310                               000      000                0001123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh-------hHHHHHhhh------------------
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK-------SLVMWSSMK------------------  254 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~-------~~~~~~~~~------------------  254 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||+||+.||.....       .......+.                  
T Consensus       243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~  322 (391)
T PHA03212        243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD  322 (391)
T ss_pred             ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence            4699999999999999999999999999999999999988753211       000000000                  


Q ss_pred             -------hhc--CCcCCCCC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          255 -------ELV--DPTLGDAY--NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       255 -------~~~--~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                             ...  .+.....+  .......+.+|+.+||+.||.+|||+.|++++-
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp  377 (391)
T PHA03212        323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFA  377 (391)
T ss_pred             HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcCh
Confidence                   000  00000000  012344688999999999999999999999753

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=3.6e-27  Score=224.59  Aligned_cols=204  Identities=18%  Similarity=0.181  Sum_probs=143.6

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------  165 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------  165 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||.+.... .......+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            447899999999999999999984 568999999997543 233456788999999999999999999976532      


Q ss_pred             -CeEEEEEccCCCChhhhhh-----------------------hcc------------CCCCceeE--------------
Q 048684          166 -GMHLILELSPHGSLASLLY-----------------------AKW------------LPDKWTHH--------------  195 (363)
Q Consensus       166 -~~~lv~E~~~~gsL~~~l~-----------------------~~~------------~~~~~~~~--------------  195 (363)
                       ..++||||+++ +|...+.                       ...            +.......              
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~  173 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  173 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc
Confidence             26899999986 5544331                       000            00000000              


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC-----------------
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-----------------  258 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~-----------------  258 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..........+.....                 
T Consensus       174 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T cd07874         174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_pred             ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHH
Confidence            112346899999999999999999999999999999999999999765422111111100000                 


Q ss_pred             ---CcC----------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 ---PTL----------------GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 ---~~~----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                         +..                ...........+.+++.+||+.||.+|||+.|++++-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp  312 (355)
T cd07874         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP  312 (355)
T ss_pred             hcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence               000                0001111234688999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.94  E-value=8.1e-27  Score=214.77  Aligned_cols=200  Identities=20%  Similarity=0.289  Sum_probs=139.7

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||+|+||.||+|.. .+|..||||.+.... .......+.+|+.++..++||||+++++++.++. .++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            477889999999999999985 568999999986433 2233467889999999999999999999887655 8999999


Q ss_pred             cCCCChhhhhhhcc----CC------------------------------------CCceeE---------------EEe
Q 048684          174 SPHGSLASLLYAKW----LP------------------------------------DKWTHH---------------IVS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~~----~~------------------------------------~~~~~~---------------~~~  198 (363)
                      ++ |+|.+++....    ++                                    ......               ...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT  159 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence            98 57766653100    00                                    000000               001


Q ss_pred             ecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC------------------
Q 048684          199 KIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP------------------  259 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~------------------  259 (363)
                      ...+++.|+|||++.+. .++.++|||||||++|+|+||++||.+.......+........+                  
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
T cd07861         160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF  239 (285)
T ss_pred             CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence            12357889999998654 57999999999999999999999998654332222211111000                  


Q ss_pred             -cCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -TLGD----AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       ....    ........++.+++.+||+.||.+|||+.+|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence             0000    0001123457899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=7.1e-28  Score=223.38  Aligned_cols=197  Identities=16%  Similarity=0.258  Sum_probs=144.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      .|.....||.|+||.||++.. .++..||||.+..... ...+.+.+|+.+++.++||||+++++++..++ .++||||+
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH-HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            344446799999999999985 5689999999865433 33567899999999999999999999776655 89999999


Q ss_pred             CCCChhhhhhhccC------------------------------------CCCceeEE---------------Eeecccc
Q 048684          175 PHGSLASLLYAKWL------------------------------------PDKWTHHI---------------VSKIEGT  203 (363)
Q Consensus       175 ~~gsL~~~l~~~~~------------------------------------~~~~~~~~---------------~~~~~gt  203 (363)
                      ++++|.+++....+                                    .......+               .....|+
T Consensus       102 ~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  181 (292)
T cd06658         102 EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT  181 (292)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecC
Confidence            99999887632110                                    00000000               1123578


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      +.|+|||++.+..++.++|||||||++|||++|+.||.......... .+.....+.+..  .......+.+++..||..
T Consensus       182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~  258 (292)
T cd06658         182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-RIRDNLPPRVKD--SHKVSSVLRGFLDLMLVR  258 (292)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcCCCcccc--ccccCHHHHHHHHHHccC
Confidence            89999999998899999999999999999999999998654432222 222222222221  112334588999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 048684          284 TSACRPQMSKVVQA  297 (363)
Q Consensus       284 dP~~RPt~~evl~~  297 (363)
                      ||.+|||+.+++++
T Consensus       259 ~P~~Rpt~~~il~~  272 (292)
T cd06658         259 EPSQRATAQELLQH  272 (292)
T ss_pred             ChhHCcCHHHHhhC
Confidence            99999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=3.4e-27  Score=205.19  Aligned_cols=202  Identities=21%  Similarity=0.342  Sum_probs=146.2

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CeEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~lv~E  172 (363)
                      ..|...+.||+|.||.||+|+ ..+|+.||||+++... .++.....++||+.|+.++|+|||.+++.+... ++.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            357778899999999999998 6789999999998654 334456789999999999999999999976654 4899999


Q ss_pred             ccCCCChhhhhhhccCCC---------------------Cce--------------------------------eEEEee
Q 048684          173 LSPHGSLASLLYAKWLPD---------------------KWT--------------------------------HHIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~~---------------------~~~--------------------------------~~~~~~  199 (363)
                      ||+. +|+..|..+.+..                     .|.                                .+....
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~  160 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH  160 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc
Confidence            9985 8887765211000                     000                                001111


Q ss_pred             cccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-----------------------hhh
Q 048684          200 IEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-----------------------MKE  255 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-----------------------~~~  255 (363)
                      -+-|.+|.|||.+.+. .|+..+||||.|||+.||+-|.+-|.+.+.-.....+                       +..
T Consensus       161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~  240 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQ  240 (318)
T ss_pred             ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhc
Confidence            2468899999999765 5999999999999999999998777765432221111                       111


Q ss_pred             hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          256 LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...+.... ..+.....+.+++..+|..||.+|+|+.|++++-.
T Consensus       241 ~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y  283 (318)
T KOG0659|consen  241 FPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPY  283 (318)
T ss_pred             CCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence            11111111 22334556799999999999999999999997643

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=7.5e-27  Score=215.86  Aligned_cols=201  Identities=17%  Similarity=0.258  Sum_probs=139.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||.|+||+||+|.. .+|+.||||.+...........+.+|+.+++.++||||+++++++.+.. .++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5788999999999999999985 4689999999875443333356788999999999999999999887766 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCceeEE---------------Eeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------VSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------~~~~  200 (363)
                      +.+ +|.+++....                                      +.......+               ....
T Consensus        85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  163 (291)
T cd07844          85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNE  163 (291)
T ss_pred             CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccccc
Confidence            985 8877664110                                      000000000               0112


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC--------------------
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP--------------------  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--------------------  259 (363)
                      .+++.|+|||++.+ ..++.++|||||||++|+|++|+.||............+......                    
T Consensus       164 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (291)
T cd07844         164 VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSF  243 (291)
T ss_pred             ccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccc
Confidence            35788999999875 458999999999999999999999997554211111111000000                    


Q ss_pred             -cC-----CCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -TL-----GDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -~~-----~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       ..     .... .......+.+++.+||+.+|.+|||+.+++.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         244 PFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             cccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence             00     0000 00011457899999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.94  E-value=6.2e-27  Score=223.77  Aligned_cols=203  Identities=18%  Similarity=0.192  Sum_probs=143.0

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||+|+||.||++.. .+++.||||.+.... .......+.+|+.+++.++||||+++++++...       
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            46899999999999999999984 568899999987543 233356788999999999999999999976432       


Q ss_pred             CeEEEEEccCCCChhhhhh-----------------------hcc------------CCCCceeE--------------E
Q 048684          166 GMHLILELSPHGSLASLLY-----------------------AKW------------LPDKWTHH--------------I  196 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~-----------------------~~~------------~~~~~~~~--------------~  196 (363)
                      ..|+||||+++ +|.+++.                       ...            +.......              .
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence            26899999986 5554332                       000            00000000              1


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------------------
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------------------  258 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------------------  258 (363)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+........+.....                  
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  261 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence            12346899999999999999999999999999999999999999765432221111110000                  


Q ss_pred             --CcCC----------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 --PTLG----------------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 --~~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                        +...                ..........+.+++.+||+.||.+|||+.+++++-
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp  319 (364)
T cd07875         262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  319 (364)
T ss_pred             hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence              0000                000111234688999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=4.5e-27  Score=217.13  Aligned_cols=197  Identities=17%  Similarity=0.286  Sum_probs=145.0

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      .|...+.||.|+||.||++.. .+++.||+|.+...... ....+.+|+.+++.++||||+++++++..++ .++++||+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~   98 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL   98 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence            355567899999999999984 56899999998654332 3467889999999999999999999877655 88999999


Q ss_pred             CCCChhhhhhhccC------------------------------------CCCceeEE---------------Eeecccc
Q 048684          175 PHGSLASLLYAKWL------------------------------------PDKWTHHI---------------VSKIEGT  203 (363)
Q Consensus       175 ~~gsL~~~l~~~~~------------------------------------~~~~~~~~---------------~~~~~gt  203 (363)
                      ++++|.+++....+                                    .......+               .....|+
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  178 (285)
T cd06648          99 EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT  178 (285)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCC
Confidence            99999887642110                                    00000000               0113488


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      +.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.....+.+..  .......+.+++.+||+.
T Consensus       179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~  255 (285)
T cd06648         179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM-KRIRDNLPPKLKN--LHKVSPRLRSFLDRMLVR  255 (285)
T ss_pred             ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH-HHHHhcCCCCCcc--cccCCHHHHHHHHHHccc
Confidence            8999999999888999999999999999999999999765432222 2222222222211  112334599999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 048684          284 TSACRPQMSKVVQA  297 (363)
Q Consensus       284 dP~~RPt~~evl~~  297 (363)
                      +|.+|||+.+++++
T Consensus       256 ~p~~Rpt~~~il~~  269 (285)
T cd06648         256 DPAQRATAAELLNH  269 (285)
T ss_pred             ChhhCcCHHHHccC
Confidence            99999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=1.5e-26  Score=212.69  Aligned_cols=198  Identities=23%  Similarity=0.342  Sum_probs=138.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHH-HHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGI-IVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||.||+|.. .+|..||||.+...........+..|+.+ ++.++||||+++++++..+. .+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            4788899999999999999985 56999999998765433334566677775 56678999999999877655 899999


Q ss_pred             ccCCCChhhhhhhc------------------------cCCC--Ccee----------------EE--------------
Q 048684          173 LSPHGSLASLLYAK------------------------WLPD--KWTH----------------HI--------------  196 (363)
Q Consensus       173 ~~~~gsL~~~l~~~------------------------~~~~--~~~~----------------~~--------------  196 (363)
                      |++ |+|.+++...                        .+..  ...+                .+              
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  159 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA  159 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            997 5776555310                        0000  0000                00              


Q ss_pred             EeecccccCCCCchhhcc----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMH----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      .....|+..|+|||++.+    ..++.++|||||||++|+|++|+.||..................+.++.   ...+..
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  236 (283)
T cd06617         160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPA---EKFSPE  236 (283)
T ss_pred             cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCc---cccCHH
Confidence            011347888999999865    4568999999999999999999999975332222112222222222221   123345


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHH
Q 048684          273 LLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+++..||..+|.+||++.+++.+
T Consensus       237 l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         237 FQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcC
Confidence            8999999999999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.94  E-value=4.9e-27  Score=216.78  Aligned_cols=200  Identities=21%  Similarity=0.343  Sum_probs=140.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||+|+||.||++.. .+|+.||||.+...........+.+|+.++.++. |||||++++++.... .+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            556667899999999999984 5689999999875544444678899999999996 999999999776654 8899999


Q ss_pred             cCCCChhhhhh---h---c-------------------cCC-C-CceeE----------------E--------------
Q 048684          174 SPHGSLASLLY---A---K-------------------WLP-D-KWTHH----------------I--------------  196 (363)
Q Consensus       174 ~~~gsL~~~l~---~---~-------------------~~~-~-~~~~~----------------~--------------  196 (363)
                      +.. +|.++..   .   .                   .+. . ...|.                +              
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  163 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA  163 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence            874 4433211   0   0                   000 0 00000                0              


Q ss_pred             EeecccccCCCCchhhccC---CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHG---IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~---~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      .....|++.|+|||++.+.   .++.++|||||||++|||++|+.||..................+.+........+..+
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (288)
T cd06616         164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSF  243 (288)
T ss_pred             cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHH
Confidence            0112478899999999776   6899999999999999999999999765421111111111222233222222345569


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+++.+||+.+|.+|||+.+|+.+
T Consensus       244 ~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         244 VNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=1.5e-26  Score=211.13  Aligned_cols=189  Identities=17%  Similarity=0.254  Sum_probs=134.0

Q ss_pred             CcccccCceEEEEEEEcC-------------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684          102 NLIGQGGYAEVYKGQLED-------------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~-------------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      +.||+|+||.||+|.+.+             ...||+|.+.... ......|..|+.++..++||||+++++++.... .
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~   79 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN   79 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            368999999999998532             2358999876543 233567889999999999999999999887665 7


Q ss_pred             EEEEEccCCCChhhhhhhcc--------------------------------CCCCcee-------------EE------
Q 048684          168 HLILELSPHGSLASLLYAKW--------------------------------LPDKWTH-------------HI------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--------------------------------~~~~~~~-------------~~------  196 (363)
                      ++||||+++|+|..++....                                .+.....             .+      
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            89999999999887764210                                0000000             00      


Q ss_pred             -----EeecccccCCCCchhhc-cCCCCccceEEechhHHHHHH-hCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          197 -----VSKIEGTFGYLPPEFFM-HGIADEKTDVYAYGVLLLEII-TGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       197 -----~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~ell-tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                           .....|+..|+|||++. +..++.++|||||||++|||+ +|..||..........  ...... ......    
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~--~~~~~~-~~~~~~----  232 (262)
T cd05077         160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER--FYEGQC-MLVTPS----  232 (262)
T ss_pred             ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH--HHhcCc-cCCCCC----
Confidence                 01124778899999987 467899999999999999998 5888887543222111  111110 111112    


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ...+.+|+.+||+.||.+||++.++++.+
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            24588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=5.9e-27  Score=216.14  Aligned_cols=200  Identities=17%  Similarity=0.254  Sum_probs=137.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhC---CCCCcceEEEEEEcC------
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHV---DHPNIAKMIGYGVEG------  165 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~------  165 (363)
                      +|+..+.||+|+||+||+|.. .+|+.||+|.+..... ......+.+|+.++..+   +||||+++++++...      
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            477889999999999999984 5789999999875322 22234566777777665   799999999987542      


Q ss_pred             CeEEEEEccCCCChhhhhhhcc---------------------------------------CCCCceeE-----------
Q 048684          166 GMHLILELSPHGSLASLLYAKW---------------------------------------LPDKWTHH-----------  195 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~-----------  195 (363)
                      ..++||||+++ +|.+++....                                       +.......           
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            26899999985 7766653110                                       00000000           


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc---------------
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV---------------  257 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~---------------  257 (363)
                         ......||+.|+|||++.+..++.++|||||||++|||++|++||.................               
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07863         160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR  239 (288)
T ss_pred             CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence               01123578899999999989999999999999999999999999976544322222111000               


Q ss_pred             ---CCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 ---DPTLG---DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ---~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                         .+...   ....+.....+.+++.+||+.||.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence               00000   00111234458899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=1.4e-27  Score=216.82  Aligned_cols=195  Identities=18%  Similarity=0.255  Sum_probs=145.0

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      +|+..+.||.|+||.||+|.. .+|..||+|.+....  .....+.+.+|++++++++||||+++++++..+. .++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            478889999999999999985 468999999997533  2234678999999999999999999999776655 899999


Q ss_pred             ccCCCChhhhhhhc-cC------------------------------------CCCceeE--------------EEeecc
Q 048684          173 LSPHGSLASLLYAK-WL------------------------------------PDKWTHH--------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-~~------------------------------------~~~~~~~--------------~~~~~~  201 (363)
                      |+.+++|.+++... .+                                    .......              ......
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence            99999998877422 00                                    0000000              012245


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh--HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS--LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      |+..|+|||++.+..++.++||||||+++|+|++|..||......  ......... ..+..+    ......+.+++.+
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~i~~  235 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYP----ATWSTEAIDAINK  235 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCc----ccCcHHHHHHHHH
Confidence            788899999999888999999999999999999999999876532  111111111 112222    2233559999999


Q ss_pred             ccccCCCCCCCH--HHHHH
Q 048684          280 CINQTSACRPQM--SKVVQ  296 (363)
Q Consensus       280 cl~~dP~~RPt~--~evl~  296 (363)
                      ||+.||.+||++  .++++
T Consensus       236 ~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         236 LLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HccCChhHcCCccHHHHhc
Confidence            999999999999  66653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.2e-26  Score=208.81  Aligned_cols=197  Identities=17%  Similarity=0.238  Sum_probs=145.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC---e
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---M  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~  167 (363)
                      .+|...+.||+|+||.||+|.. .+|..||+|.+....    .......+.+|+.++++++||||+++++++.+..   +
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4788999999999999999984 568999999875321    2334568899999999999999999999876542   7


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE---------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------------  195 (363)
                      ++++||+++++|.+++....                                     +.......               
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            89999999999987764110                                     00000000               


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                         ......|+..|+|||++.+..++.++|||||||++|+|++|+.||..................+.+    +......
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~  237 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPML----PDGVSDA  237 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCC----CcccCHH
Confidence               011245788999999999888999999999999999999999999765433222222222222223    3334455


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHH
Q 048684          273 LLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+++..||+ +|..||++.+++.+
T Consensus       238 ~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         238 CRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HHHHHHHHhc-CcccCccHHHHhcC
Confidence            9999999999 57999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-28  Score=212.03  Aligned_cols=204  Identities=19%  Similarity=0.307  Sum_probs=146.6

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------G  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~  166 (363)
                      ..++|.+.+.||+|||+-||.++ ..++..+|+|++.-.. .+..+..++|++..++++||||+++++++..+      .
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            34689999999999999999998 7789999999997554 34478899999999999999999999876432      2


Q ss_pred             eEEEEEccCCCChhhhhhhcc------------------------CCC---Ccee------EEEe---------------
Q 048684          167 MHLILELSPHGSLASLLYAKW------------------------LPD---KWTH------HIVS---------------  198 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~------------------------~~~---~~~~------~~~~---------------  198 (363)
                      .||++.|+..|+|.+.+....                        +..   ...|      .++.               
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            799999999999999875110                        000   0000      0000               


Q ss_pred             ----e---------------cccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh
Q 048684          199 ----K---------------IEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL  256 (363)
Q Consensus       199 ----~---------------~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~  256 (363)
                          +               -..|..|.|||.+.-   ...++++|||||||+||+|+.|..||+........  .....
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS--laLAv  255 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS--LALAV  255 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe--EEEee
Confidence                0               016788999999964   45789999999999999999999999743211000  00011


Q ss_pred             cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.+.-......+..+.+++.+|++.||.+||++.+++..+..
T Consensus       256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            11111111111245559999999999999999999999988753

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.94  E-value=3.3e-26  Score=209.37  Aligned_cols=198  Identities=23%  Similarity=0.379  Sum_probs=142.2

Q ss_pred             CccCCcccccCceEEEEEEEc----CCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           98 FSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      |.+.++||+|+||+||+|.+.    +|+.||||.+.... .....+.+.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            556788999999999999742    36889999987543 2334667899999999999999999999876432      


Q ss_pred             -eEEEEEccCCCChhhhhhhccCC-------------------------------------------CCceeEE------
Q 048684          167 -MHLILELSPHGSLASLLYAKWLP-------------------------------------------DKWTHHI------  196 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~~-------------------------------------------~~~~~~~------  196 (363)
                       .+++++|+++|+|.+++......                                           ......+      
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence             36888999999997765311000                                           0000000      


Q ss_pred             -----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          197 -----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       197 -----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                                 .....+++.|++||.+....++.++|||||||++|||++ |++||......... ..+.......... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~-  238 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY-NYLIKGNRLKQPP-  238 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH-HHHHcCCcCCCCC-
Confidence                       011124567999999999999999999999999999999 88998765443222 1111111111112 


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                         .....+.+++.+||+.+|..||++.++++.|+.
T Consensus       239 ---~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         239 ---DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             ---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence               233459999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=2e-26  Score=212.14  Aligned_cols=202  Identities=21%  Similarity=0.309  Sum_probs=142.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+....||+|+||.||+|.. .+|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++..+. .++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            4688889999999999999985 468999999986433 2223456889999999999999999999887665 889999


Q ss_pred             ccCCCChhhhhhhc-------------------------c------------CCCCceeE---------------EEeec
Q 048684          173 LSPHGSLASLLYAK-------------------------W------------LPDKWTHH---------------IVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------~------------~~~~~~~~---------------~~~~~  200 (363)
                      |++++.|..++...                         .            +.......               .....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            99998877655310                         0            00000000               00122


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh---h-----------------hcCC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK---E-----------------LVDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~---~-----------------~~~~  259 (363)
                      .++..|+|||++.+ ..++.++|||||||++|||++|++||.+.......+....   .                 ...+
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP  240 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence            46788999999876 4589999999999999999999999976543322221110   0                 0001


Q ss_pred             cCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ......+     ......+.+++.+||+.+|.+||++.+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            1100000     1123558899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.94  E-value=2e-27  Score=212.48  Aligned_cols=207  Identities=21%  Similarity=0.325  Sum_probs=150.4

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC---eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~l  169 (363)
                      -++|+..+.|++|+||.||+|+ ..++..||+|+++... .++..-..++||.+|.+++|||||.+-.+....+   +|+
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            3568889999999999999998 5679999999997544 2344456789999999999999999998766543   899


Q ss_pred             EEEccCCCChhhhhhhc---------------------cCCCCceeE--------------------------------E
Q 048684          170 ILELSPHGSLASLLYAK---------------------WLPDKWTHH--------------------------------I  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~---------------------~~~~~~~~~--------------------------------~  196 (363)
                      |||||++ +|..++...                     ++...|..+                                .
T Consensus       155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~  233 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP  233 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence            9999997 887777511                     111112111                                1


Q ss_pred             EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc---------------
Q 048684          197 VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT---------------  260 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~---------------  260 (363)
                      .+.++-|++|.|||.+.+. .|+++.|+||+|||+.||+++++-|.+...-.....++...-.|.               
T Consensus       234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~  313 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKK  313 (419)
T ss_pred             CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhc
Confidence            2345679999999999876 499999999999999999999999987654333322221111100               


Q ss_pred             ----------CCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          261 ----------LGDAYNTE-QLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       261 ----------~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                                +...+... ....-.+|+...+..||.+|.|+.+.+++=...+
T Consensus       314 ~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  314 MTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             cccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence                      00001111 2356778999999999999999999998654433

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.8e-27  Score=219.17  Aligned_cols=205  Identities=20%  Similarity=0.242  Sum_probs=152.0

Q ss_pred             HhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--------h-----hHHHHHHHHHHHHHhCCCCCcceE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--------E-----EMTTDYLSELGIIVHVDHPNIAKM  158 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--------~-----~~~~~~~~E~~~l~~l~H~niv~l  158 (363)
                      ..-+.|.+...||+|.||.|-+|. ..+++.||||++.+...        .     ...+...+||.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345789999999999999999998 56799999999864321        0     123578899999999999999999


Q ss_pred             EEEEEcCC---eEEEEEccCCCChhh-------------------------hhhh------cc------CCCCceeE---
Q 048684          159 IGYGVEGG---MHLILELSPHGSLAS-------------------------LLYA------KW------LPDKWTHH---  195 (363)
Q Consensus       159 ~~~~~~~~---~~lv~E~~~~gsL~~-------------------------~l~~------~~------~~~~~~~~---  195 (363)
                      +.+..++.   +|||+|||..|.+..                         |||.      ..      +.......   
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsD  253 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISD  253 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeec
Confidence            99988765   899999999886532                         1111      00      01111110   


Q ss_pred             -----------------EEeecccccCCCCchhhccCC----CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh
Q 048684          196 -----------------IVSKIEGTFGYLPPEFFMHGI----ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK  254 (363)
Q Consensus       196 -----------------~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~  254 (363)
                                       .+...+|||.|||||.+.++.    .+.+.||||+||+||-|+.|+.||.+........+++.
T Consensus       254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn  333 (576)
T KOG0585|consen  254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVN  333 (576)
T ss_pred             cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhc
Confidence                             112357999999999998743    36789999999999999999999998765555444444


Q ss_pred             hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..+.    -...++....+.+||.++|.+||..|.+..+|..+.+..
T Consensus       334 ~pL~----fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt  376 (576)
T KOG0585|consen  334 DPLE----FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT  376 (576)
T ss_pred             Cccc----CCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence            3322    112234556699999999999999999999998877643

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=4.2e-27  Score=223.07  Aligned_cols=205  Identities=16%  Similarity=0.203  Sum_probs=141.3

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-----  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----  165 (363)
                      ...++|...+.||.|+||+||+|.. .++..||||.+..... ......+.+|+.++..++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3457899999999999999999984 5788999999875432 22345678999999999999999999866432     


Q ss_pred             --CeEEEEEccCCCChhhhhhhccCC------------------------------------CCcee------------E
Q 048684          166 --GMHLILELSPHGSLASLLYAKWLP------------------------------------DKWTH------------H  195 (363)
Q Consensus       166 --~~~lv~E~~~~gsL~~~l~~~~~~------------------------------------~~~~~------------~  195 (363)
                        ..+++++++ +++|.+++....++                                    .....            .
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD  170 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence              267899988 67887665311000                                    00000            0


Q ss_pred             EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--cC--------------
Q 048684          196 IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--VD--------------  258 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--~~--------------  258 (363)
                      .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||................  ..              
T Consensus       171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07878         171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARK  250 (343)
T ss_pred             CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHH
Confidence            1123458999999999976 568999999999999999999999997653221111110000  00              


Q ss_pred             --CcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 --PTLGDAYN-------TEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 --~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                        ..++....       ......+.+|+.+||+.||.+|||+.+++.+-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp  299 (343)
T cd07878         251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP  299 (343)
T ss_pred             HhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence              00000000       00123478999999999999999999999763

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=5.4e-26  Score=206.83  Aligned_cols=190  Identities=17%  Similarity=0.229  Sum_probs=139.8

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||.|+||.||++.. .+++.||+|.+....  .......+.+|+.+++.++||||+++++++.++. .++||||+++|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            79999999999995 458999999987543  2234567999999999999999999999877665 8999999999999


Q ss_pred             hhhhhhcc-CC------------------------------------CCceeE--------------EEeecccccCCCC
Q 048684          180 ASLLYAKW-LP------------------------------------DKWTHH--------------IVSKIEGTFGYLP  208 (363)
Q Consensus       180 ~~~l~~~~-~~------------------------------------~~~~~~--------------~~~~~~gt~~y~a  208 (363)
                      .+++.... ++                                    ......              ......|++.|++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~  160 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA  160 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence            98875210 00                                    000000              0112357889999


Q ss_pred             chhhccCCCCccceEEechhHHHHHHhCCCCCCCchh--hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCC
Q 048684          209 PEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK--SLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSA  286 (363)
Q Consensus       209 PE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  286 (363)
                      ||++.+..++.++|+|||||++|+|++|..||.....  .............+..    +......+.+++.+||+.+|.
T Consensus       161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF----PNYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC----CcccCHHHHHHHHHHccCChh
Confidence            9999888899999999999999999999999986652  2122111211112222    222245599999999999999


Q ss_pred             CCCC-----HHHHHHH
Q 048684          287 CRPQ-----MSKVVQA  297 (363)
Q Consensus       287 ~RPt-----~~evl~~  297 (363)
                      +||+     +.+++++
T Consensus       237 ~R~~~~~~~~~~l~~~  252 (262)
T cd05572         237 ERLGNLKGGIKDIKKH  252 (262)
T ss_pred             hCcCCcccCHHHHhcC
Confidence            9999     7777653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=6.8e-27  Score=236.43  Aligned_cols=205  Identities=26%  Similarity=0.432  Sum_probs=155.5

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc----C----CcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE----D----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYG  162 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~  162 (363)
                      +...++..+.+.||+|.||.|++|...    .    ...||||.++........+.+..|+.+|..+ .|||||.++|+|
T Consensus       292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~  371 (609)
T KOG0200|consen  292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC  371 (609)
T ss_pred             eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence            344455566679999999999999732    1    3469999998776666678999999999998 599999999999


Q ss_pred             EcCC-eEEEEEccCCCChhhhhhhcc-----------------CCCCc--------------------eeE---------
Q 048684          163 VEGG-MHLILELSPHGSLASLLYAKW-----------------LPDKW--------------------THH---------  195 (363)
Q Consensus       163 ~~~~-~~lv~E~~~~gsL~~~l~~~~-----------------~~~~~--------------------~~~---------  195 (363)
                      ...+ .++|+||+.+|+|.++|....                 +....                    .|+         
T Consensus       372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi  451 (609)
T KOG0200|consen  372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI  451 (609)
T ss_pred             ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence            8754 899999999999999997655                 10000                    000         


Q ss_pred             -------E----------------Eeecccc--cCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHH
Q 048684          196 -------I----------------VSKIEGT--FGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM  249 (363)
Q Consensus       196 -------~----------------~~~~~gt--~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~  249 (363)
                             +                ...-.|+  ..|||||.+....|+.+||||||||+|||++| |..||.+.......
T Consensus       452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l  531 (609)
T KOG0200|consen  452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL  531 (609)
T ss_pred             cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH
Confidence                   0                0000122  34999999999999999999999999999999 88999874423333


Q ss_pred             HHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +..+..+.....+....    .++.+++..||+.+|..||++.++++.+..
T Consensus       532 ~~~l~~G~r~~~P~~c~----~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  532 LEFLKEGNRMEQPEHCS----DEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HHHHhcCCCCCCCCCCC----HHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            45555554444334344    449999999999999999999999998865

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=7.6e-27  Score=215.04  Aligned_cols=202  Identities=20%  Similarity=0.315  Sum_probs=141.5

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||.||+|... +|+.||+|.+..... ....+.+.+|+.++..++||||+++++++..+. .++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46888899999999999999964 589999999865432 223567889999999999999999999887665 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------c------------CCCCceeEE---------------Eeec
Q 048684          173 LSPHGSLASLLYAK-------------------------W------------LPDKWTHHI---------------VSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------~------------~~~~~~~~~---------------~~~~  200 (363)
                      |+++++|..+....                         .            +.......+               ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            99998887654210                         0            000000000               0123


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh--------------------hhcCC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK--------------------ELVDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~--------------------~~~~~  259 (363)
                      .|+..|+|||++.+ ..++.++|||||||++|||++|++||..............                    ....+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            47788999999875 4578999999999999999999999975432211111000                    00001


Q ss_pred             cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDA-----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....     ..+.....+.+++.+||+.+|.+||++.+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            10000     011234558999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=2e-26  Score=213.11  Aligned_cols=203  Identities=18%  Similarity=0.250  Sum_probs=140.7

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++++|...+.||+|+||.||+|.. .+|..||+|.+...........+.+|+.++..++|+||+++++++..+. .++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            457899999999999999999984 5689999999875543333456789999999999999999999887765 78999


Q ss_pred             EccCCCChhhhhhhcc--------------------------------------CCCCceeEE---------------Ee
Q 048684          172 ELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------VS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------~~  198 (363)
                      ||+. ++|.+++....                                      +.......+               ..
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            9996 56655442100                                      000000000               01


Q ss_pred             ecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc--------------------
Q 048684          199 KIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV--------------------  257 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~--------------------  257 (363)
                      ...+++.|+|||++.+. .++.++|||||||++|||+||..||.................                    
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            12368889999998754 588999999999999999999999976543211111100000                    


Q ss_pred             --CCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 --DPTLGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 --~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .........     ......+.+++.+|++.||.+|||+.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence              000000000     0013458899999999999999999999854

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.94  E-value=4.1e-26  Score=213.16  Aligned_cols=201  Identities=20%  Similarity=0.298  Sum_probs=143.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCC--CchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..|...+.||.|+||.||+|.. .++..||+|.+...  ........+.+|+.+++.++|+|++++++++.... .++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            3477778899999999999984 56889999998643  22334567889999999999999999999887766 78999


Q ss_pred             EccCCCChhhhhhhccC--------------------------------------CCCcee-----------EEEeeccc
Q 048684          172 ELSPHGSLASLLYAKWL--------------------------------------PDKWTH-----------HIVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~--------------------------------------~~~~~~-----------~~~~~~~g  202 (363)
                      ||+. |+|.+++.....                                      ......           .......|
T Consensus        95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  173 (308)
T cd06634          95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG  173 (308)
T ss_pred             EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence            9997 577665531000                                      000000           00112357


Q ss_pred             ccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       203 t~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ++.|+|||++.   ...++.++|||||||++|+|++|..||................. +..   ........+.+++.+
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~li~~  249 (308)
T cd06634         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PAL---QSGHWSEYFRNFVDS  249 (308)
T ss_pred             CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-CCc---CcccccHHHHHHHHH
Confidence            88999999984   35688999999999999999999999876543332222222221 111   112234458899999


Q ss_pred             ccccCCCCCCCHHHHHHHhhcC
Q 048684          280 CINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ||+.+|.+||++.+++.+....
T Consensus       250 cl~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         250 CLQKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             HhhCCcccCCCHHHHhhCcccc
Confidence            9999999999999999875543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-28  Score=249.07  Aligned_cols=205  Identities=21%  Similarity=0.352  Sum_probs=156.8

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .+...+-+|..+..||.|.||.||.|. ..+|...|||.+..... ......+.+|+.++..++|||+|++||+..+.+ 
T Consensus      1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred             HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence            345556788999999999999999998 67899999999875432 233456779999999999999999999988766 


Q ss_pred             eEEEEEccCCCChhhhhhhccCCC----------------------------------------------CceeEE----
Q 048684          167 MHLILELSPHGSLASLLYAKWLPD----------------------------------------------KWTHHI----  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~~~----------------------------------------------~~~~~~----  196 (363)
                      .+|.||||.+|+|.+++......+                                              .....+    
T Consensus      1309 v~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             HHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence            789999999999999875211000                                              000001    


Q ss_pred             ------EeecccccCCCCchhhccC---CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          197 ------VSKIEGTFGYLPPEFFMHG---IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       197 ------~~~~~gt~~y~aPE~~~~~---~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                            +....||+.|||||++.+.   ...-+.||||+|||+.||+||++||...+......-++..+-.|.++    .
T Consensus      1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P----~ 1464 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP----E 1464 (1509)
T ss_pred             hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc----h
Confidence                  1124699999999999764   46789999999999999999999998765544433333333344443    3


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+..-.+++..||+.||..|.++.|++++-
T Consensus      1465 ~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1465 RLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             hhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            4666689999999999999999999988754

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.94  E-value=4.4e-27  Score=213.22  Aligned_cols=198  Identities=23%  Similarity=0.422  Sum_probs=144.0

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhH-HHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEM-TTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |+..+.||+|+||+||++.. .+++.||+|.+........ ......|+.++.+++||||+++++++.... .++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            56678999999999999995 4577899999987664332 224466999999999999999999887655 88999999


Q ss_pred             CCCChhhhhh-hcc------------------------------------CCCC---------------ceeEEEeeccc
Q 048684          175 PHGSLASLLY-AKW------------------------------------LPDK---------------WTHHIVSKIEG  202 (363)
Q Consensus       175 ~~gsL~~~l~-~~~------------------------------------~~~~---------------~~~~~~~~~~g  202 (363)
                      ++++|.+++. ...                                    +...               ..........|
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  160 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVG  160 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999998875 100                                    0000               00112233468


Q ss_pred             ccCCCCchhhc-cCCCCccceEEechhHHHHHHhCCCCCCCch---hhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFM-HGIADEKTDVYAYGVLLLEIITGRQALDSSQ---KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       203 t~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      +..|+|||++. +..++.++||||+|+++|+|++|..||....   ...................  .......+.+++.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~  238 (260)
T PF00069_consen  161 TPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ--SREKSEELRDLIK  238 (260)
T ss_dssp             SGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS--HTTSHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc--cchhHHHHHHHHH
Confidence            89999999998 8889999999999999999999999998762   1111111111111111100  0011256999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      .||+.||.+||++.+++++
T Consensus       239 ~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  239 KMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHSSSSGGGSTTHHHHHTS
T ss_pred             HHccCChhHCcCHHHHhcC
Confidence            9999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.94  E-value=7.1e-26  Score=204.40  Aligned_cols=197  Identities=20%  Similarity=0.359  Sum_probs=147.8

Q ss_pred             CCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C-eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--G-MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~-~~lv~  171 (363)
                      +|...+.||+|++|.||+|... +|..|++|.+..... ......+.+|+.++++++||||+++++++...  . .++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999864 789999999875442 23467899999999999999999999988876  4 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE---------E--------E
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------I--------V  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------~--------~  197 (363)
                      ||+++++|.+++....                                     +.......         .        .
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            9999999988764210                                     00000000         0        1


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH-HHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL-VMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....++..|+|||.+.+..++.++||||||+++|+|++|..||....... ..+........+.+    +......+.++
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~  236 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEI----PEHLSEEAKDF  236 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCC----CcccCHHHHHH
Confidence            22357788999999988889999999999999999999999998765222 22222111112222    22334569999


Q ss_pred             HHHccccCCCCCCCHHHHHHH
Q 048684          277 ASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.+||+.+|.+||++.+++++
T Consensus       237 i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         237 LRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             HHHhCcCChhhCCCHHHHhhC
Confidence            999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.94  E-value=1.6e-26  Score=212.87  Aligned_cols=200  Identities=19%  Similarity=0.286  Sum_probs=138.7

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||.|+||.||+|.. .+|..||||.+.... .......+.+|++++++++||||+++++++.+.. .++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            478889999999999999985 568999999986443 2223457889999999999999999999877655 8899999


Q ss_pred             cCCCChhhhhhhcc---------------------------------------CCCCceeEE---------------Eee
Q 048684          174 SPHGSLASLLYAKW---------------------------------------LPDKWTHHI---------------VSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~---------------------------------------~~~~~~~~~---------------~~~  199 (363)
                      +. ++|.+++....                                       +.......+               ...
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  159 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence            96 57766553100                                       000000000               011


Q ss_pred             cccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-------------------
Q 048684          200 IEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-------------------  259 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-------------------  259 (363)
                      ..+++.|+|||++.+.. ++.++|||||||++|||+||+.||..................+                   
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07860         160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP  239 (284)
T ss_pred             ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence            23577899999987654 6899999999999999999999997654322222111111000                   


Q ss_pred             cCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....    ..+.....+.+++.+||+.||.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            00000    001123457899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-26  Score=214.11  Aligned_cols=202  Identities=19%  Similarity=0.301  Sum_probs=144.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||.||+|.. .+++.||||.+.... .......+.+|++++++++|+||+++++++..++ .++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3688899999999999999985 468899999986533 2334568899999999999999999999887765 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCCCceeE----------------EEee
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPDKWTHH----------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~~~~~~----------------~~~~  199 (363)
                      |++++.|..++...                                     .+.......                ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            99987765543210                                     000000000                1112


Q ss_pred             cccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh--hc----------CC-------
Q 048684          200 IEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE--LV----------DP-------  259 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~--~~----------~~-------  259 (363)
                      ..|+..|+|||++.+. .++.++|||||||++|+|++|++||.+.......+.....  ..          ++       
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            3467889999999888 8899999999999999999999999765433222221100  00          00       


Q ss_pred             -cCC------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -TLG------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       ...      ..++......+.+++.+||+.+|.+|||+.+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence             000      00111225669999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=2e-26  Score=207.13  Aligned_cols=197  Identities=23%  Similarity=0.379  Sum_probs=146.6

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      +|...+.||+|+||.||++.. .+|..|++|.+..... .....+.+|+.+++.++||||+++++++.... .++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~   79 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC   79 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence            477788999999999999996 4689999999976543 23578999999999999999999999877655 88999999


Q ss_pred             CCCChhhhhhhc--cC------------------------------------CCCceeEE--------------Eeeccc
Q 048684          175 PHGSLASLLYAK--WL------------------------------------PDKWTHHI--------------VSKIEG  202 (363)
Q Consensus       175 ~~gsL~~~l~~~--~~------------------------------------~~~~~~~~--------------~~~~~g  202 (363)
                      ++++|.+++...  .+                                    .......+              .....|
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  159 (253)
T cd05122          80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG  159 (253)
T ss_pred             CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence            999998876422  00                                    00000000              123457


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      +..|+|||++.+..++.++||||||+++|+|++|+.||.............. ...+....  .......+.+++..||+
T Consensus       160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~~l~  236 (253)
T cd05122         160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRN--PEKWSDEFKDFLKKCLQ  236 (253)
T ss_pred             CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCc--ccccCHHHHHHHHHHcc
Confidence            8889999999988899999999999999999999999986533222222111 11111111  11123459999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 048684          283 QTSACRPQMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RPt~~evl~~  297 (363)
                      .||..|||+.+++.+
T Consensus       237 ~~p~~R~t~~~~l~~  251 (253)
T cd05122         237 KNPEKRPTAEQLLKH  251 (253)
T ss_pred             CChhhCCCHHHHhcC
Confidence            999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=5.7e-26  Score=214.02  Aligned_cols=198  Identities=20%  Similarity=0.285  Sum_probs=139.5

Q ss_pred             Cccccc--CceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQG--GYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G--~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ..||.|  +||+||++.. .+|+.||||.+.... .....+.+.+|+.++..++||||+++++++..++ .++||||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356766  9999999985 579999999987543 3344578889999999999999999999887766 8899999999


Q ss_pred             CChhhhhhhcc---C------------------------------------CCCceeEEE--------------------
Q 048684          177 GSLASLLYAKW---L------------------------------------PDKWTHHIV--------------------  197 (363)
Q Consensus       177 gsL~~~l~~~~---~------------------------------------~~~~~~~~~--------------------  197 (363)
                      |+|.+++....   +                                    .......+.                    
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD  163 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence            99988764210   0                                    000000000                    


Q ss_pred             --eecccccCCCCchhhccC--CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-----------------
Q 048684          198 --SKIEGTFGYLPPEFFMHG--IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-----------------  256 (363)
Q Consensus       198 --~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-----------------  256 (363)
                        ....++..|+|||++.+.  .++.++|||||||++|||++|+.||............+...                 
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd08226         164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM  243 (328)
T ss_pred             ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence              001234569999999764  47899999999999999999999997654332221111100                 


Q ss_pred             ------------------------cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          257 ------------------------VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       257 ------------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                              ....+...........+.+++.+||+.||.+|||+.+++++-.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~  310 (328)
T cd08226         244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF  310 (328)
T ss_pred             ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence                                    0000011112235567899999999999999999999997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=1.7e-26  Score=212.59  Aligned_cols=201  Identities=17%  Similarity=0.257  Sum_probs=142.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|.+.+.||.|+||.||+|.. .+|..||||.+..... ......+.+|+.+++.++||||+++++++..+. .++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            477889999999999999985 5689999999875442 334567999999999999999999999877665 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCceeE----------------EEee
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTHH----------------IVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~~----------------~~~~  199 (363)
                      + +++|.+++....                                      +.......                ....
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH  159 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence            9 999988763110                                      00000000                0112


Q ss_pred             cccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----------------C
Q 048684          200 IEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----------------L  261 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----------------~  261 (363)
                      ..|+..|+|||++.+. .++.++|||||||++|||+||.+||.+................+.                 .
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF  239 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence            3478899999998654 469999999999999999999888865543221111111100000                 0


Q ss_pred             CC-------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          262 GD-------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       262 ~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..       ...++....+.+++.+||+.+|.+|||+.+++.+-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~  283 (286)
T cd07832         240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP  283 (286)
T ss_pred             CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence            00       00012236689999999999999999999998753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=3.9e-26  Score=206.99  Aligned_cols=188  Identities=19%  Similarity=0.298  Sum_probs=135.2

Q ss_pred             CcccccCceEEEEEEEcC-C----------cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684          102 NLIGQGGYAEVYKGQLED-G----------QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~-g----------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      +.||+|+||.||+|...+ +          ..|++|.+......  ...|.+|+.+++.++||||+++++++.....++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEE
Confidence            469999999999998643 3          25788877644322  5789999999999999999999998877668999


Q ss_pred             EEccCCCChhhhhhhcc--C------------------------------C------CCc-------eeEE---------
Q 048684          171 LELSPHGSLASLLYAKW--L------------------------------P------DKW-------THHI---------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~------------------------------~------~~~-------~~~~---------  196 (363)
                      |||+++|+|.+++....  +                              +      ...       ...+         
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            99999999998875211  0                              0      000       0000         


Q ss_pred             --EeecccccCCCCchhhccC--CCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          197 --VSKIEGTFGYLPPEFFMHG--IADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       197 --~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                        .....++..|+|||++...  .++.++|||||||++|||++ |..||........ ..... ... ..+....    .
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-~~~~~-~~~-~~~~~~~----~  231 (259)
T cd05037         159 LSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-ERFYQ-DQH-RLPMPDC----A  231 (259)
T ss_pred             ccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-HHHHh-cCC-CCCCCCc----h
Confidence              0012367789999999876  78999999999999999999 5777765532111 11111 111 1111111    5


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+.+++.+||..+|.+|||+.+|++.|
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=2.8e-27  Score=223.71  Aligned_cols=202  Identities=16%  Similarity=0.228  Sum_probs=140.8

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~  167 (363)
                      +++|.+.++||+|+||.||+|. ..+|+.||||.+...........+.+|+.++.+++||||+++++++....      .
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            4689999999999999999998 46789999999875443344567889999999999999999999765432      6


Q ss_pred             EEEEEccCCCChhhhhhhccC------------------------------------CCCceeE----------------
Q 048684          168 HLILELSPHGSLASLLYAKWL------------------------------------PDKWTHH----------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~~~~~----------------  195 (363)
                      ++|+||+.+ +|.+++....+                                    .......                
T Consensus        84 ~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  162 (336)
T cd07849          84 YIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH  162 (336)
T ss_pred             EEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence            899999975 66654431100                                    0000000                


Q ss_pred             --EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh-----------hhhcCC--
Q 048684          196 --IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM-----------KELVDP--  259 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~-----------~~~~~~--  259 (363)
                        ......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.........           ....+.  
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (336)
T cd07849         163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRA  242 (336)
T ss_pred             cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhh
Confidence              0112357889999998755 468999999999999999999999997643221111000           000000  


Q ss_pred             -----cCC--CCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -----TLG--DAY-----NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -----~~~--~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                           ..+  ...     .+.....+.+++.+||+.||.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         243 RNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             hhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                 000  000     01123458899999999999999999999986

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=1.9e-26  Score=227.63  Aligned_cols=206  Identities=16%  Similarity=0.196  Sum_probs=139.5

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC------CCCcceEEEEE
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD------HPNIAKMIGYG  162 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~  162 (363)
                      ++...+++|.+.++||+|+||+||+|.. .+++.||||++....  .....+..|+.++..++      |.+|+.+++|+
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            3445578899999999999999999984 568899999996432  12345566777777665      45688999987


Q ss_pred             EcCC--eEEEEEccCCCChhhhhhhc--------------------cCCC--Ccee------------------------
Q 048684          163 VEGG--MHLILELSPHGSLASLLYAK--------------------WLPD--KWTH------------------------  194 (363)
Q Consensus       163 ~~~~--~~lv~E~~~~gsL~~~l~~~--------------------~~~~--~~~~------------------------  194 (363)
                      ....  .++|||++ +++|.+++...                    ++..  ...|                        
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence            7543  78899988 56776655310                    0000  0000                        


Q ss_pred             --------E------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh--
Q 048684          195 --------H------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS--  252 (363)
Q Consensus       195 --------~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~--  252 (363)
                              .            ....++||+.|+|||++.+..|+.++|||||||++|||+||++||.+..........  
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  359 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK  359 (467)
T ss_pred             cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence                    0            012356899999999999999999999999999999999999999865432111100  


Q ss_pred             hhh-----------------hcCC--cCCCCCCH---------------HHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          253 MKE-----------------LVDP--TLGDAYNT---------------EQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       253 ~~~-----------------~~~~--~~~~~~~~---------------~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+                 ..+.  .+.....+               .....+.+|+..||+.||.+|||+.|++++-
T Consensus       360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp  439 (467)
T PTZ00284        360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP  439 (467)
T ss_pred             HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence            000                 0000  00000000               0124577999999999999999999999854

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=217.39  Aligned_cols=190  Identities=17%  Similarity=0.222  Sum_probs=134.0

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC---CCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV---DHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      ||+|+||+||+|.. .+|+.||||.+....  .......+..|..++..+   +||||+++++++.... .++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999984 568999999986432  122234566777777765   6999999999877665 8999999999


Q ss_pred             CChhhhhhhcc-------------------------------------CCCCce---------------eEEEeeccccc
Q 048684          177 GSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSKIEGTF  204 (363)
Q Consensus       177 gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~~~gt~  204 (363)
                      |+|..++....                                     +.....               .......+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            99977663110                                     000000               00112356999


Q ss_pred             CCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          205 GYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       205 ~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      .|+|||++.+. .++.++|||||||++|||+||+.||................  ..++.   ......+.+++.+||+.
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~---~~~~~~~~~li~~~L~~  235 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK--VRFPK---NVLSDEGRQFVKGLLNR  235 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC--CCCCC---ccCCHHHHHHHHHHcCC
Confidence            99999999765 48999999999999999999999998765433322222111  11111   11234488999999999


Q ss_pred             CCCCCC----CHHHHHHHh
Q 048684          284 TSACRP----QMSKVVQAL  298 (363)
Q Consensus       284 dP~~RP----t~~evl~~L  298 (363)
                      ||.+||    ++.+++++-
T Consensus       236 ~P~~R~~~~~~~~~ll~h~  254 (330)
T cd05586         236 NPQHRLGAHRDAVELKEHP  254 (330)
T ss_pred             CHHHCCCCCCCHHHHhcCc
Confidence            999998    577777643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.94  E-value=6.8e-27  Score=215.27  Aligned_cols=200  Identities=17%  Similarity=0.222  Sum_probs=137.5

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||+|+||.||+|.. .+|..||+|.+.... .......+.+|+.+++.++||||+++++++.+.. .++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            477788999999999999985 569999999986433 2223456788999999999999999999776655 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCceeEE---------------Eeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------VSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------~~~~  200 (363)
                      +.+ +|.+++....                                      +.......+               ....
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE  159 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence            974 6766553100                                      000000000               0112


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh---------------hhcCC----c
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK---------------ELVDP----T  260 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~---------------~~~~~----~  260 (363)
                      .+++.|+|||++.+. .++.++|||||||++|||+||..|+............+.               ...+.    .
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07839         160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM  239 (284)
T ss_pred             ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence            467889999998765 479999999999999999999988654322211111111               10010    0


Q ss_pred             CCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          261 LGDA-----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       261 ~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ....     ..+.....+.+++.+||+.||.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0000     011234568899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=8.1e-27  Score=214.67  Aligned_cols=200  Identities=19%  Similarity=0.298  Sum_probs=141.4

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      +|+..+.||.|+||.||+|.. .+|..||||.+...........+.+|+.+++.++||||+++++++.+.+ .++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            578889999999999999995 5689999999976544433567789999999999999999999887665 89999999


Q ss_pred             CCCChhhhhhhcc----C------------------------------------CCCceeEE---------------Eee
Q 048684          175 PHGSLASLLYAKW----L------------------------------------PDKWTHHI---------------VSK  199 (363)
Q Consensus       175 ~~gsL~~~l~~~~----~------------------------------------~~~~~~~~---------------~~~  199 (363)
                      ++ +|.+++....    +                                    .......+               ...
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN  159 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence            85 7776653211    0                                    00000000               012


Q ss_pred             cccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------------CcCCCC--
Q 048684          200 IEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------------PTLGDA--  264 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------------~~~~~~--  264 (363)
                      ..+++.|++||++.+. .++.++|||||||++|+|++|+.||.+................            +.+...  
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP  239 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence            3467889999998664 5789999999999999999999999865432211111110000            000000  


Q ss_pred             ---------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          265 ---------YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       265 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                               ..+.....+.+++..||+.||.+||++.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                     011234568899999999999999999999853

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3e-27  Score=231.63  Aligned_cols=198  Identities=19%  Similarity=0.324  Sum_probs=149.1

Q ss_pred             CccCCcccccCceEEEEEEE-cCC----cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDG----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      +...++||+|+||+||+|.+ +.|    -+||||++......+...+|+.|+-+|.+++|||+++|+|+|..+.+.||++
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq  777 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ  777 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence            34468899999999999984 444    3699999987776666789999999999999999999999999988999999


Q ss_pred             ccCCCChhhhhhhcc---------------------CCC----------------------------------CceeEEE
Q 048684          173 LSPHGSLASLLYAKW---------------------LPD----------------------------------KWTHHIV  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------~~~----------------------------------~~~~~~~  197 (363)
                      |||.|+|.+|++...                     +..                                  +......
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence            999999999986211                     000                                  0000001


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....-.+.|||=|.+....|+.++|||||||++||++| |..|+++.....+- ..++..-.    -..++-....+.-+
T Consensus       858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-dlle~geR----LsqPpiCtiDVy~~  932 (1177)
T KOG1025|consen  858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-DLLEKGER----LSQPPICTIDVYMV  932 (1177)
T ss_pred             cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-HHHhcccc----CCCCCCccHHHHHH
Confidence            11123456889999999999999999999999999999 99999887543321 11111111    11233344458999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhhc
Q 048684          277 ASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+||..|+..||+++++...+..
T Consensus       933 mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  933 MVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             HHHHhccCcccCccHHHHHHHHHH
Confidence            999999999999999999876653

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=4.8e-27  Score=216.20  Aligned_cols=199  Identities=18%  Similarity=0.284  Sum_probs=139.6

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |+..+.||.|++|.||+|.. .+|..||||.+..... ......+.+|+.+++.++||||+++++++.++. .+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56778999999999999985 5799999999875432 223457889999999999999999999887766 88999999


Q ss_pred             CCCChhhhhhhcc---CCC------------------------------------CceeEE---------------Eeec
Q 048684          175 PHGSLASLLYAKW---LPD------------------------------------KWTHHI---------------VSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~---~~~------------------------------------~~~~~~---------------~~~~  200 (363)
                      . ++|.+++....   +..                                    .....+               ....
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  159 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE  159 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence            5 58877764211   000                                    000000               0112


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-------------------c
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-------------------T  260 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-------------------~  260 (363)
                      .+++.|+|||++.+. .++.++|||||||++|+|+||++||..................+                   .
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK  239 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence            357889999988664 57999999999999999999999997654322222211110000                   0


Q ss_pred             CC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          261 LG----DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       261 ~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..    ..........+.+++.+||+.||.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            00    00111223458899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=9.7e-26  Score=211.13  Aligned_cols=195  Identities=19%  Similarity=0.334  Sum_probs=140.7

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      |...+.||+|+||+||+|.. .+|..||+|.+....  .......+.+|+.+++.++|||++++++++.+.. .++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            66677899999999999985 568999999986432  2233467889999999999999999999888766 7899999


Q ss_pred             cCCCChhhhhhhccCC--------------------------------------CCceeE-----------EEeeccccc
Q 048684          174 SPHGSLASLLYAKWLP--------------------------------------DKWTHH-----------IVSKIEGTF  204 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~--------------------------------------~~~~~~-----------~~~~~~gt~  204 (363)
                      +. |+|.+++.....+                                      ......           ......|+.
T Consensus       103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~  181 (313)
T cd06633         103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP  181 (313)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence            97 4665554311000                                      000000           011235788


Q ss_pred             CCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          205 GYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       205 ~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      .|+|||++.   ...++.++|||||||++|+|++|.+||........................+    ...+.+++.+||
T Consensus       182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l  257 (313)
T cd06633         182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW----TDSFRGFVDYCL  257 (313)
T ss_pred             cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcccc----CHHHHHHHHHHc
Confidence            999999984   4568999999999999999999999997765433333222222211111222    344889999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.+|.+||++.+++.+
T Consensus       258 ~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         258 QKIPQERPASAELLRH  273 (313)
T ss_pred             cCChhhCcCHHHHhcC
Confidence            9999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.2e-26  Score=213.41  Aligned_cols=192  Identities=17%  Similarity=0.288  Sum_probs=141.4

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      .+||+|+||.||++.. .+|..||||.+..... .....+.+|+.+++.++|+||+++++++..++ .++||||+++++|
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            5799999999999985 5789999999864432 33567899999999999999999999877665 8899999999999


Q ss_pred             hhhhhhcc------------------------------------CCCCceeEE---------------EeecccccCCCC
Q 048684          180 ASLLYAKW------------------------------------LPDKWTHHI---------------VSKIEGTFGYLP  208 (363)
Q Consensus       180 ~~~l~~~~------------------------------------~~~~~~~~~---------------~~~~~gt~~y~a  208 (363)
                      .+++....                                    +.......+               .....|++.|+|
T Consensus       105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~  184 (292)
T cd06657         105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMA  184 (292)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccC
Confidence            87763110                                    000000000               112357889999


Q ss_pred             chhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 048684          209 PEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR  288 (363)
Q Consensus       209 PE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  288 (363)
                      ||++.+..++.++|||||||++|+|++|..||.+....... ..+.....+.+..  .......+.+++.+||+.+|.+|
T Consensus       185 pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~P~~R  261 (292)
T cd06657         185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPKLKN--LHKVSPSLKGFLDRLLVRDPAQR  261 (292)
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhhCCcccCC--cccCCHHHHHHHHHHHhCCcccC
Confidence            99998888999999999999999999999999765432221 1122222222211  11223448899999999999999


Q ss_pred             CCHHHHHHH
Q 048684          289 PQMSKVVQA  297 (363)
Q Consensus       289 Pt~~evl~~  297 (363)
                      |++.+++.+
T Consensus       262 ~~~~~ll~~  270 (292)
T cd06657         262 ATAAELLKH  270 (292)
T ss_pred             cCHHHHhcC
Confidence            999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.93  E-value=1.3e-26  Score=209.63  Aligned_cols=196  Identities=24%  Similarity=0.437  Sum_probs=146.9

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||.|+||.||++. ..+|..+|+|.+.... .......+..|+.+++.++||||+++++++.... .++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            47788999999999999998 4578899999987543 2334567889999999999999999999766655 8899999


Q ss_pred             cCCCChhhhhhhc-----cCCC--------------------Ccee----------------E-------------EEee
Q 048684          174 SPHGSLASLLYAK-----WLPD--------------------KWTH----------------H-------------IVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~-----~~~~--------------------~~~~----------------~-------------~~~~  199 (363)
                      +++++|.+++...     .+..                    ...+                .             ....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence            9999998876421     0000                    0000                0             0011


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..|++.|++||.+.+..++.++|+||||+++|+|++|+.||................. +.+    +......+.+++..
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~li~~  235 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY-PPI----PPIYSQDLQNFIRS  235 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCC----chhhCHHHHHHHHH
Confidence            2478899999999998999999999999999999999999987654333222222221 122    22344559999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.+|.+||++.+++++
T Consensus       236 ~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         236 MLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HcCCCcccCCCHHHHhcC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.93  E-value=8.4e-27  Score=216.28  Aligned_cols=200  Identities=19%  Similarity=0.269  Sum_probs=140.7

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP----EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      +|+..+.||.|+||.||+|.. .+|+.||||.+.....    ......+..|+.+++.++|+||+++++++.+.+ .++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            477788999999999999985 5689999999975432    223456778999999999999999999887755 8999


Q ss_pred             EEccCCCChhhhhhhcc--CCC--------------------Ccee----------------EE---------------E
Q 048684          171 LELSPHGSLASLLYAKW--LPD--------------------KWTH----------------HI---------------V  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--~~~--------------------~~~~----------------~~---------------~  197 (363)
                      |||+ +|+|.+++....  ++.                    ...|                .+               .
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence            9999 889988875321  100                    0000                00               0


Q ss_pred             eecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----------------
Q 048684          198 SKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----------------  259 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----------------  259 (363)
                      ....+++.|+|||++.+ ..++.++|||||||++|||++|.+||..................+                 
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence            01125677999999865 467999999999999999999988886544322111111110000                 


Q ss_pred             cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 TLGDA-----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 ~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....     ........+.+++.+||+.||..|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            00000     112234568899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.93  E-value=1.3e-25  Score=210.31  Aligned_cols=193  Identities=18%  Similarity=0.351  Sum_probs=129.3

Q ss_pred             CCcccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEEEEcc
Q 048684          101 ENLIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLILELS  174 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv~E~~  174 (363)
                      ..+||+|+||+||+|...   +++.||+|.+.....   ...+.+|+.++++++|||||++++++...   ..+++|||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence            468999999999999853   467899999865432   24577899999999999999999977542   278999998


Q ss_pred             CCCChhhhhhh----------------------------------c------------cC----CCCceeE---------
Q 048684          175 PHGSLASLLYA----------------------------------K------------WL----PDKWTHH---------  195 (363)
Q Consensus       175 ~~gsL~~~l~~----------------------------------~------------~~----~~~~~~~---------  195 (363)
                      .+ +|.+++..                                  .            .+    .......         
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            75 65544320                                  0            00    0000000         


Q ss_pred             ---------EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhH------------------
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSL------------------  247 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~------------------  247 (363)
                               ......||+.|+|||++.+. .++.++|||||||++|||++|++||.......                  
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM  241 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence                     01234678999999999774 58999999999999999999999996432110                  


Q ss_pred             -----HHHHhhhhhcC----------CcCCC-C---C----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          248 -----VMWSSMKELVD----------PTLGD-A---Y----NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       248 -----~~~~~~~~~~~----------~~~~~-~---~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                           ..|........          ..... .   +    .......+.+++.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                 00111000000          00000 0   0    00012347899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=2.1e-25  Score=201.50  Aligned_cols=196  Identities=22%  Similarity=0.404  Sum_probs=148.2

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||.|+||.||++.. .++..||+|.+..... ......+.+|+++++.++|||++++++.+.... .++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            477888999999999999985 4689999999975432 244677899999999999999999999776655 8899999


Q ss_pred             cCCCChhhhhhhcc-----CC------------------------------------CCcee---------------EEE
Q 048684          174 SPHGSLASLLYAKW-----LP------------------------------------DKWTH---------------HIV  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-----~~------------------------------------~~~~~---------------~~~  197 (363)
                      +++++|.+++....     ++                                    .....               ...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            99999987774311     00                                    00000               011


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ....|++.|+|||.+.+..++.++||||||+++|+|++|..||................. +.++..++    ..+.+++
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~i  235 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY-PPIPSQYS----SELRNLV  235 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC-CCCCCCCC----HHHHHHH
Confidence            224578889999999988999999999999999999999999977653333322222222 22222333    4489999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||..+|..|||+.+++++
T Consensus       236 ~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         236 SSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHcCCChhhCcCHHHHhcC
Confidence            99999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-25  Score=200.32  Aligned_cols=195  Identities=25%  Similarity=0.433  Sum_probs=147.6

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|+..+.||+|+||.||++.. .+++.||+|.+..... +.....+.+|++++.+++||||+++++++.+.. .+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            477889999999999999985 4688999999976542 234678999999999999999999999877665 7899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCCCceeEE---------------Eeecc
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPDKWTHHI---------------VSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~---------------~~~~~  201 (363)
                      +++++|.+++....                                     +.......+               .....
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  160 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV  160 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence            99999988764210                                     000000000               01235


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |+..|+|||.+.+..++.++||||||+++|+|++|..||.........+..... ..+.++...    ...+.+++.+||
T Consensus       161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~i~~~l  235 (254)
T cd06627         161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-DHPPLPEGI----SPELKDFLMQCF  235 (254)
T ss_pred             cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-CCCCCCCCC----CHHHHHHHHHHH
Confidence            788899999998888999999999999999999999999866544444433322 222222333    345899999999


Q ss_pred             ccCCCCCCCHHHHHH
Q 048684          282 NQTSACRPQMSKVVQ  296 (363)
Q Consensus       282 ~~dP~~RPt~~evl~  296 (363)
                      +.+|++|||+.+++.
T Consensus       236 ~~~p~~R~~~~~~l~  250 (254)
T cd06627         236 QKDPNLRPTAKQLLK  250 (254)
T ss_pred             hCChhhCcCHHHHhc
Confidence            999999999999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.93  E-value=5.3e-26  Score=208.88  Aligned_cols=192  Identities=21%  Similarity=0.294  Sum_probs=135.6

Q ss_pred             ccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||+|+||+||++. ..+|+.||+|.+....  .......+..|+.++..++||||+++++++...+ .|+||||+++|+|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6999999999998 4568999999986432  1223456788999999999999999999776655 8999999999999


Q ss_pred             hhhhhhcc---CC------------------------------------CCceeE--------------EEeecccccCC
Q 048684          180 ASLLYAKW---LP------------------------------------DKWTHH--------------IVSKIEGTFGY  206 (363)
Q Consensus       180 ~~~l~~~~---~~------------------------------------~~~~~~--------------~~~~~~gt~~y  206 (363)
                      .+++....   ++                                    ......              ......|+..|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY  160 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence            88774211   00                                    000000              00122467889


Q ss_pred             CCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCC
Q 048684          207 LPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSA  286 (363)
Q Consensus       207 ~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  286 (363)
                      +|||++.+..++.++|||||||++|+|++|+.||..................  .....+......+.+++.+||+.||.
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~  238 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEALLQKDPE  238 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHHccCChh
Confidence            9999998888999999999999999999999999765431111111111110  01112222344589999999999999


Q ss_pred             CCC-----CHHHHHHH
Q 048684          287 CRP-----QMSKVVQA  297 (363)
Q Consensus       287 ~RP-----t~~evl~~  297 (363)
                      +||     ++.+++.+
T Consensus       239 ~R~~~~~~~~~~ll~h  254 (277)
T cd05577         239 KRLGCRGGSADEVREH  254 (277)
T ss_pred             HccCCCcccHHHHHhC
Confidence            999     66666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=1.2e-25  Score=220.36  Aligned_cols=196  Identities=16%  Similarity=0.190  Sum_probs=136.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..+|.+.+.||+|+||.||++.. .+++.||||...       ...+.+|+.+|++++|||||++++++..+. .++|||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            45799999999999999999985 458899999642       234678999999999999999999877665 789999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCce-----------------eEEE
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWT-----------------HHIV  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~-----------------~~~~  197 (363)
                      ++. |+|.+++....                                      +.....                 ....
T Consensus       241 ~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        241 KYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             ccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence            995 67777653110                                      000000                 0011


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh-------hHHHHHhhhhhc--CCcC-------
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK-------SLVMWSSMKELV--DPTL-------  261 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~-------~~~~~~~~~~~~--~~~~-------  261 (363)
                      ..++||+.|+|||++.+..++.++|||||||+||||++|..|+.....       .......+....  ...+       
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  399 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR  399 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence            235699999999999999999999999999999999998876543210       011111111100  0000       


Q ss_pred             -----------------CCCCCH---HHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          262 -----------------GDAYNT---EQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       262 -----------------~~~~~~---~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                       ....+.   .....+.+|+.+||+.||.+|||+.|++++-
T Consensus       400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp  456 (461)
T PHA03211        400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP  456 (461)
T ss_pred             HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence                             000000   1123588999999999999999999999763

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=1.5e-25  Score=207.49  Aligned_cols=201  Identities=15%  Similarity=0.232  Sum_probs=140.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||.|+||+||+|.. .+|+.||+|.+..... ......+.+|+.++++++||||+++++++.++. .++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            5788899999999999999985 4689999999864332 233467889999999999999999999887765 889999


Q ss_pred             ccCCCChhhhhhhc---------------------------c------CC-------CCceeEE---------------E
Q 048684          173 LSPHGSLASLLYAK---------------------------W------LP-------DKWTHHI---------------V  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~---------------------------~------~~-------~~~~~~~---------------~  197 (363)
                      |++ ++|.+++...                           .      .+       ......+               .
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~  160 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF  160 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence            996 4665554210                           0      00       0000000               0


Q ss_pred             eecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----------------
Q 048684          198 SKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----------------  259 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----------------  259 (363)
                      ....|++.|+|||++.+. .++.++|||||||++|+|+||.+||..................+                 
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
T PLN00009        161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSA  240 (294)
T ss_pred             ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhh
Confidence            112357889999998764 57999999999999999999999997654322222211110000                 


Q ss_pred             --cCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 --TLGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 --~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .....    ..+.....+.+++.+||+.+|.+||++.+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        241 FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              00000    011223458899999999999999999999974

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.8e-26  Score=206.40  Aligned_cols=195  Identities=19%  Similarity=0.261  Sum_probs=135.5

Q ss_pred             CcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHH-HhCCCCCcceEEEEEEcCC-eEEEEEccCC
Q 048684          102 NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGII-VHVDHPNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      +.||.|+||.||+|.. .+|+.||||.+.....  ......+..|..++ ...+||||+++++++..++ .++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5699999999999985 5689999999865431  12233455565544 4458999999999887665 8999999999


Q ss_pred             CChhhhhhhcc-CC------------------------------------CCceeEE-----------EeecccccCCCC
Q 048684          177 GSLASLLYAKW-LP------------------------------------DKWTHHI-----------VSKIEGTFGYLP  208 (363)
Q Consensus       177 gsL~~~l~~~~-~~------------------------------------~~~~~~~-----------~~~~~gt~~y~a  208 (363)
                      |+|.+++.... ++                                    ......+           .....|++.|+|
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~  161 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLA  161 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccC
Confidence            99998874210 00                                    0000000           112357889999


Q ss_pred             chhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 048684          209 PEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR  288 (363)
Q Consensus       209 PE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  288 (363)
                      ||.+.+..++.++||||||+++|+|+||..||..................  ............+.+++.+||+.+|..|
T Consensus       162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R  239 (260)
T cd05611         162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDPAKR  239 (260)
T ss_pred             hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCHHHc
Confidence            99998888999999999999999999999999876543332222111111  1111111234459999999999999999


Q ss_pred             CCHHHHHHHh
Q 048684          289 PQMSKVVQAL  298 (363)
Q Consensus       289 Pt~~evl~~L  298 (363)
                      |++.++.+.|
T Consensus       240 ~~~~~~~~~l  249 (260)
T cd05611         240 LGANGYQEIK  249 (260)
T ss_pred             cCCCcHHHHH
Confidence            9776554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=1.3e-25  Score=216.96  Aligned_cols=199  Identities=15%  Similarity=0.146  Sum_probs=138.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...|.+.+.||.|+||.||++...   .+..||||.+...      ..+.+|+.+++.++|||||++++++.... .++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            457999999999999999999743   3578999988643      23458999999999999999999776554 8899


Q ss_pred             EEccCCCChhhhhhhc-------------------------c------------CCCCcee-----------------EE
Q 048684          171 LELSPHGSLASLLYAK-------------------------W------------LPDKWTH-----------------HI  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-------------------------~------------~~~~~~~-----------------~~  196 (363)
                      ||++. ++|.+++...                         .            +......                 ..
T Consensus       165 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        165 MPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             ehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            99996 5776665310                         0            0000000                 01


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhh------------------
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKE------------------  255 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~------------------  255 (363)
                      .....||+.|+|||++....++.++|||||||++|||++|+.||.+....   ......+..                  
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence            12346999999999999999999999999999999999999999754321   001111000                  


Q ss_pred             -------hcCCcCC--CCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          256 -------LVDPTLG--DAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       256 -------~~~~~~~--~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                             ...+...  ... .......+.+++.+||..||.+|||+.+++.+-..
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f  378 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF  378 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence                   0000000  000 00123457889999999999999999999987543

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.93  E-value=6.6e-26  Score=215.79  Aligned_cols=202  Identities=20%  Similarity=0.243  Sum_probs=142.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------  165 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------  165 (363)
                      ..++|...+.||+|+||.||+|.. .+|+.||||.+.... .......+.+|+.++..++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            347899999999999999999984 579999999986432 233356788999999999999999999976532      


Q ss_pred             -CeEEEEEccCCCChhhhhhhc-----------------------c------------CCCCceeE--------------
Q 048684          166 -GMHLILELSPHGSLASLLYAK-----------------------W------------LPDKWTHH--------------  195 (363)
Q Consensus       166 -~~~lv~E~~~~gsL~~~l~~~-----------------------~------------~~~~~~~~--------------  195 (363)
                       ..++||||+.+ +|.+.+...                       .            +.......              
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  172 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  172 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence             26899999975 666654210                       0            00000000              


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc------------------
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV------------------  257 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~------------------  257 (363)
                      ......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.... +..+...+                  
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (353)
T cd07850         173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIEQLGTPSDEFMSRLQPTVRNY  251 (353)
T ss_pred             CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhhhhhhHH
Confidence            01123478899999999999999999999999999999999999976542211 11110000                  


Q ss_pred             -C--C-----------------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 -D--P-----------------TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 -~--~-----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       .  +                 .............+.+++.+||+.||.+|||+.+++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         252 VENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             0  0                 00000011234568899999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.93  E-value=2e-25  Score=208.73  Aligned_cols=197  Identities=17%  Similarity=0.265  Sum_probs=135.6

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCC-CchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCC
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG-SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGS  178 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gs  178 (363)
                      ++.+|.|+++.||++.. +|+.||||.+... ........+.+|+.+++.++||||+++++++...+ .+++|||+++|+
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34455555555555554 6999999999755 23345678999999999999999999999777655 889999999999


Q ss_pred             hhhhhhhcc---C------------------------------------CCCceeE----------------------EE
Q 048684          179 LASLLYAKW---L------------------------------------PDKWTHH----------------------IV  197 (363)
Q Consensus       179 L~~~l~~~~---~------------------------------------~~~~~~~----------------------~~  197 (363)
                      |.+++....   +                                    .......                      ..
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~  165 (314)
T cd08216          86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP  165 (314)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence            988774210   0                                    0000000                      00


Q ss_pred             eecccccCCCCchhhccC--CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc------------------
Q 048684          198 SKIEGTFGYLPPEFFMHG--IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV------------------  257 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~------------------  257 (363)
                      ....++..|+|||++...  .++.++|||||||++|||++|..||.................                  
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (314)
T cd08216         166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQ  245 (314)
T ss_pred             ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCc
Confidence            112366789999999763  589999999999999999999999986543322222111100                  


Q ss_pred             ------CCc----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          258 ------DPT----LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       258 ------~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                            ++.    ............+.+++..||+.||.+|||+.+++++-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         246 SRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS  296 (314)
T ss_pred             ccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence                  000    00111223445788999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.93  E-value=7.2e-26  Score=208.00  Aligned_cols=199  Identities=20%  Similarity=0.273  Sum_probs=136.1

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC--C-eEEEEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG--G-MHLILE  172 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~-~~lv~E  172 (363)
                      |...+.||+|+||.||+|.. .++..||+|.+..............|+.++.++. ||||+++++++.++  + .++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            56678899999999999984 5689999999875432222345568999999985 99999999988765  4 899999


Q ss_pred             ccCCCChhhhhhhcc--CCC-----------------------------------CceeEE--------------Eeecc
Q 048684          173 LSPHGSLASLLYAKW--LPD-----------------------------------KWTHHI--------------VSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--~~~-----------------------------------~~~~~~--------------~~~~~  201 (363)
                      |++ |+|.+++....  +++                                   .....+              .....
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~  159 (282)
T cd07831          81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYI  159 (282)
T ss_pred             cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCC
Confidence            997 47766654210  000                                   000000              01224


Q ss_pred             cccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh----------hhc------CCcCCCC
Q 048684          202 GTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK----------ELV------DPTLGDA  264 (363)
Q Consensus       202 gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~----------~~~------~~~~~~~  264 (363)
                      +++.|+|||++.. ..++.++|||||||++|||++|.+||.+.+..........          ...      +...+..
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07831         160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSK  239 (282)
T ss_pred             CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCccc
Confidence            7888999998754 5578999999999999999999999976543221111100          000      0000000


Q ss_pred             C-------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          265 Y-------NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       265 ~-------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .       ....+..+.+++.+||+.+|.+||++.+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            0       11235679999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.93  E-value=2.1e-25  Score=208.66  Aligned_cols=192  Identities=18%  Similarity=0.372  Sum_probs=128.5

Q ss_pred             CcccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEEEEccC
Q 048684          102 NLIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLILELSP  175 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv~E~~~  175 (363)
                      .+||+|+||+||+|...   ++..||+|.+.....   ...+.+|+.+++.++||||+++++++...   ..++||||+.
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            57999999999999854   357899999865432   34678999999999999999999987532   3789999987


Q ss_pred             CCChhhhhh----------------------------------hc------------cC----CCCceeEE---------
Q 048684          176 HGSLASLLY----------------------------------AK------------WL----PDKWTHHI---------  196 (363)
Q Consensus       176 ~gsL~~~l~----------------------------------~~------------~~----~~~~~~~~---------  196 (363)
                      + +|.+++.                                  ..            .+    .......+         
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence            5 5544331                                  00            00    00000000         


Q ss_pred             ---------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhH-------------------
Q 048684          197 ---------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSL-------------------  247 (363)
Q Consensus       197 ---------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-------------------  247 (363)
                               .....||+.|+|||++.+. .++.++|||||||++|||+||++||.......                   
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (317)
T cd07867         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG  242 (317)
T ss_pred             CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence                     1123578899999999764 58999999999999999999999996432110                   


Q ss_pred             ----HHHHhhhhhc----------CCcCC--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          248 ----VMWSSMKELV----------DPTLG--------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       248 ----~~~~~~~~~~----------~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                          ..|.......          .....        ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence                0011000000          00000        00000112347889999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.93  E-value=2e-26  Score=217.29  Aligned_cols=207  Identities=16%  Similarity=0.213  Sum_probs=143.7

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--G  166 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~  166 (363)
                      +...+++|...+.||.|+||.||++. ..+|..||||.+.... .....+.+..|+.++..++||||+++++++...  .
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            34567899999999999999999998 4579999999886432 223356788999999999999999999987653  3


Q ss_pred             eEEEEEccCCCChhhhhhhccCCC------------------------------------CceeEE------------Ee
Q 048684          167 MHLILELSPHGSLASLLYAKWLPD------------------------------------KWTHHI------------VS  198 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~~~~~------------~~  198 (363)
                      .++|+||+. ++|..++....++.                                    .....+            ..
T Consensus        85 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~  163 (328)
T cd07856          85 IYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMT  163 (328)
T ss_pred             EEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence            889999984 57776654211100                                    000000            01


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh-----------hhhc---------
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM-----------KELV---------  257 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~-----------~~~~---------  257 (363)
                      ...+++.|+|||++.+ ..++.++|||||||++|+|+||++||.............           ....         
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            2346788999999866 568999999999999999999999997653211100000           0000         


Q ss_pred             CCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          258 DPTLGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       258 ~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ........+     +.....+.+++.+||+.+|.+|||+.+++.+-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~  289 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP  289 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence            000000001     11235689999999999999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=1.6e-25  Score=213.65  Aligned_cols=197  Identities=15%  Similarity=0.223  Sum_probs=134.7

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ....+|.+.+.||+|+||.||+|.. .++..||+|.....       ....|+.++.+++|||||++++++.... .++|
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence            3346799999999999999999985 45788999975432       2346899999999999999999887766 7899


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCcee--------------EEEe
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTH--------------HIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~--------------~~~~  198 (363)
                      |||+. |+|.+++....                                      +......              ....
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  214 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL  214 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccc
Confidence            99996 57777663110                                      0000000              0112


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCC-CCchhhH---------HHHHhhh--hhcCCcCCCCCC
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQAL-DSSQKSL---------VMWSSMK--ELVDPTLGDAYN  266 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~-~~~~~~~---------~~~~~~~--~~~~~~~~~~~~  266 (363)
                      ...||+.|+|||++.+..++.++|||||||++|||+++..|+ .......         .....+.  ...+..++....
T Consensus       215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  294 (357)
T PHA03209        215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPG  294 (357)
T ss_pred             cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCc
Confidence            346899999999999999999999999999999999966554 3221110         0000010  000011110000


Q ss_pred             --------------------------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          267 --------------------------TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       267 --------------------------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                                ......+..+|.+||+.||.+|||+.||+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        295 SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             cHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence                                      0112235669999999999999999999975

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.93  E-value=1.3e-25  Score=207.94  Aligned_cols=201  Identities=17%  Similarity=0.230  Sum_probs=139.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG------  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~------  166 (363)
                      ++|+..+.||+|+||.||+|.. .+|+.||||.+..... ......+.+|+.+++.+. ||||+++++++....      
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4688899999999999999985 5689999999865432 223457889999999995 699999999776433      


Q ss_pred             eEEEEEccCCCChhhhhhhcc------------------------------------------CCC-CceeEEE------
Q 048684          167 MHLILELSPHGSLASLLYAKW------------------------------------------LPD-KWTHHIV------  197 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~------------------------------------------~~~-~~~~~~~------  197 (363)
                      .|+||||+++ +|.+++....                                          +.. .....+.      
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            6899999985 7766653110                                          000 0000000      


Q ss_pred             ---------eecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC------
Q 048684          198 ---------SKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL------  261 (363)
Q Consensus       198 ---------~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~------  261 (363)
                               ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+................+..      
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence                     00135678999999865 45799999999999999999999999765433322222111111100      


Q ss_pred             ------------C----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 ------------G----DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 ------------~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                  .    ....+.....+.+++.+||+.||.+||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence                        0    00011234558899999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.93  E-value=1.6e-25  Score=207.35  Aligned_cols=201  Identities=20%  Similarity=0.293  Sum_probs=140.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv  170 (363)
                      ++|+..+.||.|+||.||+|.. .+++.||+|.++.... +.....+.+|+.++.+++||||+++++++...   ..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4788889999999999999995 4689999999974432 23344678899999999999999999987654   38999


Q ss_pred             EEccCCCChhhhhhhccC--------------------------------------CCCceeEE---------------E
Q 048684          171 LELSPHGSLASLLYAKWL--------------------------------------PDKWTHHI---------------V  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~--------------------------------------~~~~~~~~---------------~  197 (363)
                      |||+.+ +|.+++.....                                      .......+               .
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  163 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY  163 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence            999984 78766542100                                      00000000               1


Q ss_pred             eecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-------------------
Q 048684          198 SKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-------------------  257 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-------------------  257 (363)
                      ....+++.|+|||.+.+. .++.++|||||||++|||++|.+||.................                   
T Consensus       164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (293)
T cd07843         164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK  243 (293)
T ss_pred             ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence            112467889999998764 468999999999999999999999976543222111110000                   


Q ss_pred             ------CCcCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 ------DPTLGDAYNTE-QLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ------~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                            ...+...++.. ....+.+++.+||+.+|.+|||+.|++.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                  00000111111 24558899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=6.5e-26  Score=207.50  Aligned_cols=202  Identities=19%  Similarity=0.183  Sum_probs=138.4

Q ss_pred             HHHHHHhcCCCccCCcc--cccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 048684           88 LSELQAATDNFSHENLI--GQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGV  163 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~l--G~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~  163 (363)
                      ..++....++|+..+.+  |.|+||.||++. ..+|..+|+|.+.......      .|+.+...+ +||||+++++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~   79 (267)
T PHA03390          6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVT   79 (267)
T ss_pred             HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEe
Confidence            34445555677777776  999999999998 4668899999986532211      122222222 7999999999876


Q ss_pred             cCC-eEEEEEccCCCChhhhhhhcc-CC------------------------------------CCc-eeEE--------
Q 048684          164 EGG-MHLILELSPHGSLASLLYAKW-LP------------------------------------DKW-THHI--------  196 (363)
Q Consensus       164 ~~~-~~lv~E~~~~gsL~~~l~~~~-~~------------------------------------~~~-~~~~--------  196 (363)
                      ..+ .++||||+++|+|.+++.... +.                                    ... ...+        
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         80 TLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             cCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            655 899999999999998875220 00                                    000 0000        


Q ss_pred             ---EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 ---VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                         .....|+..|+|||++.+..++.++|||||||++|||++|+.||............+........  .........+
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  237 (267)
T PHA03390        160 IGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKL--PFIKNVSKNA  237 (267)
T ss_pred             cCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccC--CcccccCHHH
Confidence               01124788999999999989999999999999999999999999754332222222211111111  1122344559


Q ss_pred             HHHHHHccccCCCCCCC-HHHHHHH
Q 048684          274 LLIASACINQTSACRPQ-MSKVVQA  297 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt-~~evl~~  297 (363)
                      .+++..||+.+|.+||+ +.+++++
T Consensus       238 ~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        238 NDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             HHHHHHHhccChhhCCchHHHHhcC
Confidence            99999999999999996 6888854

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=4.9e-26  Score=209.32  Aligned_cols=199  Identities=19%  Similarity=0.308  Sum_probs=139.4

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEEEEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHLILE  172 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~lv~E  172 (363)
                      |+..+.||.|+||.||+|.. .+|..||+|.+.... .......+.+|+.++..++||||+++++++...   ..++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            56678899999999999985 458999999997653 233356788999999999999999999988766   3899999


Q ss_pred             ccCCCChhhhhhhc--c------------------------------------CCCCceeEE----------------Ee
Q 048684          173 LSPHGSLASLLYAK--W------------------------------------LPDKWTHHI----------------VS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~--~------------------------------------~~~~~~~~~----------------~~  198 (363)
                      |+++ +|.+++...  .                                    +.......+                ..
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT  159 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc
Confidence            9985 777665321  0                                    000000000                11


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC----------------
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL----------------  261 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----------------  261 (363)
                      ...++..|+|||.+.+ ..++.++|||||||++|||+||+.||..................+..                
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcc
Confidence            2245778999998765 45899999999999999999999999765432221111110000000                


Q ss_pred             -CC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 -GD--------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 -~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       ..        .+.......+.+++.+||+.+|.+||++.+++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence             00        0000124568999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2e-26  Score=204.92  Aligned_cols=205  Identities=18%  Similarity=0.270  Sum_probs=153.4

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG  165 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~  165 (363)
                      +.++..-|+     ++||+|+|+.|-.+. +.+|..+|||++.+... ..+.++.+|++++...+ |+||++|+.|+.+.
T Consensus        75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-HSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc-hHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            445555555     789999999999998 78899999999987643 34788999999999995 99999999988876


Q ss_pred             C-eEEEEEccCCCChhhhhhhc-------------------------c------CCCCc---------------------
Q 048684          166 G-MHLILELSPHGSLASLLYAK-------------------------W------LPDKW---------------------  192 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~-------------------------~------~~~~~---------------------  192 (363)
                      . +|||||-|.||+|..+|...                         .      .|+..                     
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            6 99999999999998887511                         0      00000                     


Q ss_pred             ----------eeEEEeecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-------
Q 048684          193 ----------THHIVSKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-------  250 (363)
Q Consensus       193 ----------~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-------  250 (363)
                                ..--+..-+|+..|||||+..     ...|+.++|.||||||||-||+|.+||.+.-....-|       
T Consensus       229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence                      000112236888999999873     3469999999999999999999999997653322222       


Q ss_pred             -------HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          251 -------SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       251 -------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                             ..+.+.. -.+++..+...+.+..+++...+..|+.+|.++.+++++-+
T Consensus       309 ~CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw  363 (463)
T KOG0607|consen  309 VCQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW  363 (463)
T ss_pred             HHHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence                   1122211 13344455667788999999999999999999999998543

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.93  E-value=9.8e-26  Score=209.19  Aligned_cols=202  Identities=21%  Similarity=0.378  Sum_probs=139.8

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||.||+|... +|+.||||.+...........+..|+.++.+.. ||||+++++++.+.. .+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            367888999999999999999965 489999999976544444567778888777775 999999999887665 89999


Q ss_pred             EccCCCChhhhhhhc---------------------cCC-C-CceeE----------------E--------------Ee
Q 048684          172 ELSPHGSLASLLYAK---------------------WLP-D-KWTHH----------------I--------------VS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~---------------------~~~-~-~~~~~----------------~--------------~~  198 (363)
                      ||+.+ +|.+++...                     .+. . ...|.                +              ..
T Consensus        94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~  172 (296)
T cd06618          94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT  172 (296)
T ss_pred             eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc
Confidence            99864 554433210                     000 0 00000                0              01


Q ss_pred             ecccccCCCCchhhccCC----CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGI----ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~----~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ...|++.|+|||++.+..    ++.++|||||||++|+|++|+.||..................+.....  ......+.
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~  250 (296)
T cd06618         173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPN--EGFSPDFC  250 (296)
T ss_pred             CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCC--CCCCHHHH
Confidence            123677899999997554    889999999999999999999999764322111111111111122111  12334589


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhh
Q 048684          275 LIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +++.+||+.||..||++.+++.+..
T Consensus       251 ~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         251 SFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             HHHHHHccCChhhCCCHHHHhcChh
Confidence            9999999999999999999997643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.93  E-value=2.9e-26  Score=222.56  Aligned_cols=193  Identities=23%  Similarity=0.390  Sum_probs=143.6

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-------eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-------MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------~~  168 (363)
                      .|...+.||+|+||.||+|+ ..+|+.||||.++........+.+.+|+++|++++|||||++.+.-....       ..
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            45566789999999999999 67899999999986554455788999999999999999999999765433       57


Q ss_pred             EEEEccCCCChhhhhhh----------------------------------ccCCCCc----------------------
Q 048684          169 LILELSPHGSLASLLYA----------------------------------KWLPDKW----------------------  192 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~----------------------------------~~~~~~~----------------------  192 (363)
                      +|||||.+|||...|..                                  ...|...                      
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            99999999999988851                                  0000000                      


Q ss_pred             --eeEEEeecccccCCCCchhhc-cCCCCccceEEechhHHHHHHhCCCCCCCchhh----HHHHHhhhhhcCC------
Q 048684          193 --THHIVSKIEGTFGYLPPEFFM-HGIADEKTDVYAYGVLLLEIITGRQALDSSQKS----LVMWSSMKELVDP------  259 (363)
Q Consensus       193 --~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~----~~~~~~~~~~~~~------  259 (363)
                        ....+.+++||..|++||++. .+.|+.-+|.|||||++|+++||..||-.....    ...|.......+.      
T Consensus       174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~  253 (732)
T KOG4250|consen  174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQ  253 (732)
T ss_pred             CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeee
Confidence              001355678999999999998 488999999999999999999999999765433    2455433221111      


Q ss_pred             -------------cCCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 048684          260 -------------TLGDAYNTEQLTRLLLIASACINQTSACRP  289 (363)
Q Consensus       260 -------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  289 (363)
                                   ..+..........+...+..+|..+|.+|-
T Consensus       254 ~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  254 EEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             cccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                         001222334556677778888888998888

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.93  E-value=1.3e-25  Score=204.11  Aligned_cols=196  Identities=21%  Similarity=0.282  Sum_probs=139.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      +|.+.+.||+|+||+||++.. ..+..+++|.++...    .......+..|+.+++.++||||+++++++.+.. .++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            477888999999999999985 334556666654211    1223456778999999999999999999776555 8899


Q ss_pred             EEccCCCChhhhhhhc-----c------------------------------------CCCCc--------ee------E
Q 048684          171 LELSPHGSLASLLYAK-----W------------------------------------LPDKW--------TH------H  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-----~------------------------------------~~~~~--------~~------~  195 (363)
                      |||+++++|.+++...     .                                    +....        ..      .
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~  160 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD  160 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence            9999999998766310     0                                    00000        00      0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      ......|++.|+|||++.+..++.++||||||+++|+|++|..||............ .....+..    +......+.+
T Consensus       161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~  235 (260)
T cd08222         161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI-VEGPTPSL----PETYSRQLNS  235 (260)
T ss_pred             cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH-HcCCCCCC----cchhcHHHHH
Confidence            011234788999999998888999999999999999999999999765432222221 22222222    2334456899


Q ss_pred             HHHHccccCCCCCCCHHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ++.+||..+|.+||++.+++++
T Consensus       236 li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         236 IMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHhcCChhhCcCHHHHhhC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.93  E-value=4.6e-26  Score=198.83  Aligned_cols=207  Identities=20%  Similarity=0.277  Sum_probs=156.5

Q ss_pred             HHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-------chhHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-------PEEMTTDYLSELGIIVHV-DHPNIAKMIGYG  162 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-------~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~  162 (363)
                      ....+.|...++||.|..++|-++. ..+|+.+|+|++....       ..+..+.-.+|+.||+++ .||||+++.+++
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            3445678889999999999999997 5678899999985322       123445567899999998 599999999988


Q ss_pred             EcCC-eEEEEEccCCCChhhhhhhc-------------------------------c------CCCCceeE---------
Q 048684          163 VEGG-MHLILELSPHGSLASLLYAK-------------------------------W------LPDKWTHH---------  195 (363)
Q Consensus       163 ~~~~-~~lv~E~~~~gsL~~~l~~~-------------------------------~------~~~~~~~~---------  195 (363)
                      ..+. +++|+|.|+.|.|.|+|...                               .      +.+.....         
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec
Confidence            7766 78999999999999998521                               0      01111111         


Q ss_pred             -----EEeecccccCCCCchhhc------cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          196 -----IVSKIEGTFGYLPPEFFM------HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                           -+..+||||+|+|||.+.      ...|+..+|+||+|||+|-|+.|.+||...........++.+..  .+...
T Consensus       173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky--qF~sp  250 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY--QFRSP  250 (411)
T ss_pred             cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--ccCCc
Confidence                 123468999999999984      34689999999999999999999999986544333333333333  23334


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+.+.+....+||.+||+.||.+|.|+.|++.+-..
T Consensus       251 eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  251 EWADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             chhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            456677779999999999999999999999986544

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=8.2e-26  Score=223.43  Aligned_cols=208  Identities=23%  Similarity=0.365  Sum_probs=159.6

Q ss_pred             ccCHHHHHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 048684           85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYG  162 (363)
Q Consensus        85 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~  162 (363)
                      ...+..+...++-|++.++||.|.+|.||+++ .++|+.+|||++......+  ++...|.++|... +|||++.+||++
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEE
Confidence            34556667778899999999999999999998 6789999999988765443  5677888999887 699999999976


Q ss_pred             Ec------CCeEEEEEccCCCChhhhhhhcc---C--------------------CCCce--------------------
Q 048684          163 VE------GGMHLILELSPHGSLASLLYAKW---L--------------------PDKWT--------------------  193 (363)
Q Consensus       163 ~~------~~~~lv~E~~~~gsL~~~l~~~~---~--------------------~~~~~--------------------  193 (363)
                      .-      +.+|||||||.+||.-|++..-.   +                    .....                    
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence            52      33899999999999988775110   0                    00000                    


Q ss_pred             -----------eEEEeecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc
Q 048684          194 -----------HHIVSKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       194 -----------~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~  257 (363)
                                 ...-....||+.|||||++..     ..|+..+|+|||||+..||.-|.+|+.+......+..+.   .
T Consensus       166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip---R  242 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---R  242 (953)
T ss_pred             eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---C
Confidence                       011123469999999999953     358899999999999999999999998876554433322   2


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .|.+...-+...+.++.++|..||.+|-.+||++.+++++
T Consensus       243 NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  243 NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            2333334577888999999999999999999999999975

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=1.9e-25  Score=204.69  Aligned_cols=196  Identities=19%  Similarity=0.316  Sum_probs=145.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||+|.+....  .......+..|+.++.+++ ||||+++++++..+. .++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4688889999999999999985 579999999986532  2333467889999999998 999999999776655 8999


Q ss_pred             EEccCCCChhhhhhhc-c------------------------------------CCCCce--------------------
Q 048684          171 LELSPHGSLASLLYAK-W------------------------------------LPDKWT--------------------  193 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-~------------------------------------~~~~~~--------------------  193 (363)
                      |||+++++|.+++... .                                    +.....                    
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            9999999998877411 0                                    000000                    


Q ss_pred             ---------------eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC
Q 048684          194 ---------------HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       194 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                     ........|+..|+|||++....++.++||||||+++|++++|+.||............. . ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~-~~  238 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-K-LE  238 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-h-cC
Confidence                           001112346889999999988889999999999999999999999998665333222221 1 11


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH----HHHHHH
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQM----SKVVQA  297 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~evl~~  297 (363)
                      ..++...    ...+.+++..||+.+|.+||++    .+++++
T Consensus       239 ~~~~~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         239 YSFPPNF----PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             CCCCCcc----CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            1222223    4448999999999999999999    777754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.7e-26  Score=203.69  Aligned_cols=197  Identities=18%  Similarity=0.296  Sum_probs=151.1

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCCeEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~~lv  170 (363)
                      -++|+.+++||+|.||.|.+++ ..+|+.+|+|++++..  ..+....-+.|-++|...+||.+..|-. |.....+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            3689999999999999999998 6789999999998654  2334677889999999999999999865 5555559999


Q ss_pred             EEccCCCChhhhhhhcc------------------------------------CCCCcee----------------EEEe
Q 048684          171 LELSPHGSLASLLYAKW------------------------------------LPDKWTH----------------HIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~------------------------------------~~~~~~~----------------~~~~  198 (363)
                      |||..||.|.-+|....                                    +-++..|                .-..
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k  326 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK  326 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence            99999999988775110                                    0000000                1234


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||||.|+|||++....|+.++|+|.+|||+|||++|+.||...+......-++.+-+  .++...++    +...|+.
T Consensus       327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--kFPr~ls~----eAktLLs  400 (516)
T KOG0690|consen  327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--KFPRTLSP----EAKTLLS  400 (516)
T ss_pred             cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--cCCccCCH----HHHHHHH
Confidence            67999999999999999999999999999999999999999987766555443333322  23333344    4888999


Q ss_pred             HccccCCCCCCC-----HHHHHHH
Q 048684          279 ACINQTSACRPQ-----MSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt-----~~evl~~  297 (363)
                      ..|.+||.+|..     +.+|.++
T Consensus       401 GLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  401 GLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             HHhhcChHhhcCCCchhHHHHHhh
Confidence            999999999953     6666653

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=6e-26  Score=214.61  Aligned_cols=202  Identities=16%  Similarity=0.245  Sum_probs=140.2

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC---Ce
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~---~~  167 (363)
                      ..++|+..+.||+|+||.||+|.. .+|..||||.+.... .......+.+|+.++.++ +||||+++++++...   ..
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            346788899999999999999985 468899999885422 222345677899999999 999999999987643   27


Q ss_pred             EEEEEccCCCChhhhhhhccC------------------------------------CCCcee-----------------
Q 048684          168 HLILELSPHGSLASLLYAKWL------------------------------------PDKWTH-----------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~~~~-----------------  194 (363)
                      ++||||++ ++|..++....+                                    ......                 
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~  163 (337)
T cd07852          85 YLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN  163 (337)
T ss_pred             EEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence            89999998 488776532100                                    000000                 


Q ss_pred             ---EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh---------------
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE---------------  255 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~---------------  255 (363)
                         .......||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.+.............               
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T cd07852         164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP  243 (337)
T ss_pred             ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence               01112357888999998865 46889999999999999999999999754322111110000               


Q ss_pred             ----hcC-------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          256 ----LVD-------PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       256 ----~~~-------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                          ..+       ..+.. ..+.....+.+++.+||+.||.+|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         244 FAATMLDSLPSRPRKPLDE-LLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hHHHhhhhcccccccchhh-hccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                000       00000 011134568999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.93  E-value=6.4e-25  Score=202.19  Aligned_cols=193  Identities=22%  Similarity=0.278  Sum_probs=132.4

Q ss_pred             cccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHH---hCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684          103 LIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIV---HVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~---~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      .||+|+||.||++.. .+|+.||||.+.....  ......+.+|..++.   ..+||||+.+++++...+ .++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999985 5689999999865431  122233455554443   347999999999877654 889999999


Q ss_pred             CCChhhhhhhcc-------------------------------------CCCCceeE-------------EEeecccccC
Q 048684          176 HGSLASLLYAKW-------------------------------------LPDKWTHH-------------IVSKIEGTFG  205 (363)
Q Consensus       176 ~gsL~~~l~~~~-------------------------------------~~~~~~~~-------------~~~~~~gt~~  205 (363)
                      +|+|.+++....                                     +.......             ......||+.
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  160 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence            999987764110                                     00000000             0112358999


Q ss_pred             CCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhH-HHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          206 YLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSL-VMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       206 y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      |+|||.+.+ ..++.++|||||||++|+|++|..||....... ..........+..++..    ....+.+++..||+.
T Consensus       161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~  236 (279)
T cd05633         161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDS----FSPELKSLLEGLLQR  236 (279)
T ss_pred             ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccc----cCHHHHHHHHHHhcC
Confidence            999999864 568999999999999999999999997543211 11111111122233333    344589999999999


Q ss_pred             CCCCCC-----CHHHHHHHhh
Q 048684          284 TSACRP-----QMSKVVQALR  299 (363)
Q Consensus       284 dP~~RP-----t~~evl~~L~  299 (363)
                      ||.+||     |+.+++++..
T Consensus       237 ~p~~R~~~~~~~~~~~~~h~~  257 (279)
T cd05633         237 DVSKRLGCLGRGAQEVKEHVF  257 (279)
T ss_pred             CHHHhcCCCCCCHHHHHhCcc
Confidence            999999     5999988644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.93  E-value=2.5e-25  Score=207.72  Aligned_cols=206  Identities=23%  Similarity=0.306  Sum_probs=141.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~l  169 (363)
                      .++|+..+.||.|+||.||+|.. .+|..||+|.+..... ......+.+|+.++.+++|+||+++++++...   ..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46899999999999999999985 5699999999864332 22234567899999999999999999987654   3789


Q ss_pred             EEEccCCCChhhhhhhcc--------------------------------------CCCCceeEE---------------
Q 048684          170 ILELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------  196 (363)
                      ||||+.+ +|.+++....                                      +.......+               
T Consensus        86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~  164 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP  164 (309)
T ss_pred             EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence            9999975 6766553110                                      000000000               


Q ss_pred             EeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC----------------
Q 048684          197 VSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP----------------  259 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~----------------  259 (363)
                      .....+++.|+|||++.+ ..++.++|||||||++|||++|++||..................+                
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (309)
T cd07845         165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK  244 (309)
T ss_pred             CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence            011125677999999865 458999999999999999999999998654432222111100000                


Q ss_pred             -cCCCC-C------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          260 -TLGDA-Y------NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       260 -~~~~~-~------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                       .+... .      .......+.+++.+||+.||.+|||+.+++.+-+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~  294 (309)
T cd07845         245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK  294 (309)
T ss_pred             ccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence             00000 0      001245578999999999999999999999865544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=2.1e-25  Score=213.72  Aligned_cols=202  Identities=17%  Similarity=0.241  Sum_probs=156.0

Q ss_pred             HHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CeE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMH  168 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~  168 (363)
                      ....+.|.+...||+|.|+.|..|. ..+|..||||.+.+... ...+..+.+|+++|..++|||||+++.+.... .+|
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            4456789999999999999999998 46799999999986653 33456789999999999999999999987754 499


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------------cCCCCcee--------------EEE
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------------WLPDKWTH--------------HIV  197 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~~~--------------~~~  197 (363)
                      +||||+.+|.++++|...                                     .+.+....              ...
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccc
Confidence            999999999999998511                                     01111111              123


Q ss_pred             eecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ...||++.|.|||++.+..| ++.+|+||+||+||-|+.|..||++..........+...+.  ++-    -...++.++
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r--Ip~----~ms~dce~l  285 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR--IPF----YMSCDCEDL  285 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec--ccc----eeechhHHH
Confidence            35689999999999998876 68999999999999999999999986544333333332221  111    122348899


Q ss_pred             HHHccccCCCCCCCHHHHHHHhh
Q 048684          277 ASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +.+++..+|.+|++++++...-+
T Consensus       286 Lrk~lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  286 LRKFLVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             HHHhhccCccccCCHHHhhhhcc
Confidence            99999999999999999997644

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.93  E-value=8.2e-26  Score=214.27  Aligned_cols=201  Identities=17%  Similarity=0.184  Sum_probs=139.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---------  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---------  165 (363)
                      ++|...+.||.|+||.||+|.. .+|..||+|.+...... ..+.+.+|+.+++.++||||+++++++...         
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~-~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ-SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc-hHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            6899999999999999999984 56899999998655433 356788999999999999999999765432         


Q ss_pred             ------CeEEEEEccCCCChhhhhhhcc------------------------------------CC-CCceeEE------
Q 048684          166 ------GMHLILELSPHGSLASLLYAKW------------------------------------LP-DKWTHHI------  196 (363)
Q Consensus       166 ------~~~lv~E~~~~gsL~~~l~~~~------------------------------------~~-~~~~~~~------  196 (363)
                            ..++||||++ ++|.+++....                                    +. ......+      
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~  162 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA  162 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence                  2689999997 47766552100                                    00 0000000      


Q ss_pred             ------------EeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-------
Q 048684          197 ------------VSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-------  256 (363)
Q Consensus       197 ------------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-------  256 (363)
                                  .....|+..|+|||++.. ..++.++|||||||++|+|++|+.||................       
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T cd07854         163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREED  242 (342)
T ss_pred             eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence                        011246788999998754 468899999999999999999999997553322211111100       


Q ss_pred             -----------cC-CcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          257 -----------VD-PTLGDAY-----NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       257 -----------~~-~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                 .. .......     .+.....+.+++.+||+.||.+|||+.+++.+-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~  301 (342)
T cd07854         243 RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP  301 (342)
T ss_pred             hhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence                       00 0000000     011335588999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.5e-25  Score=212.51  Aligned_cols=202  Identities=16%  Similarity=0.271  Sum_probs=139.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||+|+||.||+|.. .+|..||||.+.... .+.....+.+|+.+++.++||||+++++++...       
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            47899999999999999999984 568999999986532 223345688999999999999999999987643       


Q ss_pred             CeEEEEEccCCCChhhhhh-----------------------hcc------------CCCCceeEE------------Ee
Q 048684          166 GMHLILELSPHGSLASLLY-----------------------AKW------------LPDKWTHHI------------VS  198 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~-----------------------~~~------------~~~~~~~~~------------~~  198 (363)
                      ..++|+||+.. +|..++.                       ...            +.......+            ..
T Consensus        94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~  172 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  172 (342)
T ss_pred             eEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC
Confidence            25899999864 6654321                       000            000000000            01


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-------------------cC
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-------------------VD  258 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-------------------~~  258 (363)
                      ...|++.|+|||++.+ ..++.++|||||||++|||++|+.||.+..........+...                   ..
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T cd07879         173 GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIK  252 (342)
T ss_pred             CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHh
Confidence            2346788999999876 468999999999999999999999998654322211111100                   00


Q ss_pred             --CcCC-CCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          259 --PTLG-DAY---NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       259 --~~~~-~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        +... ...   .+.....+.+++.+||+.||.+||++.+++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         253 SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              0000 000   01123458899999999999999999999965

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.92  E-value=4.6e-25  Score=200.21  Aligned_cols=191  Identities=19%  Similarity=0.276  Sum_probs=139.4

Q ss_pred             ccccCceEEEEEEEc-CCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||.|+||.||++... +|+.||+|.+.....  ......+.+|+.++.+++||||+++++.+..+. .+++|||+++|+|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            699999999999964 599999999865432  234567899999999999999999999776555 8999999999999


Q ss_pred             hhhhhhcc-------------------------------------CCCCceeE-----------------------EEee
Q 048684          180 ASLLYAKW-------------------------------------LPDKWTHH-----------------------IVSK  199 (363)
Q Consensus       180 ~~~l~~~~-------------------------------------~~~~~~~~-----------------------~~~~  199 (363)
                      .+++....                                     +.......                       ....
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            88764210                                     00000000                       1112


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..++..|+|||++....++.++||||||+++|+|++|..||..................  .+...  .....+.+++..
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~i~~  236 (265)
T cd05579         161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE--WPEDV--EVSDEAIDLISK  236 (265)
T ss_pred             cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC--CCccc--cCCHHHHHHHHH
Confidence            35778899999998888999999999999999999999999866544333222221111  11111  124558999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||+.+|..|||+..+.+.|
T Consensus       237 ~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         237 LLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HhcCCHhhcCCCccHHHHh
Confidence            9999999999995555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=5.3e-26  Score=209.12  Aligned_cols=199  Identities=19%  Similarity=0.256  Sum_probs=137.4

Q ss_pred             CccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |.+.+.||.|+||+||+|... +++.||||.+.............+|+..+.+++ ||||+++++++..++ .++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            567789999999999999964 588999999875433222345567999999999 999999999776655 89999999


Q ss_pred             CCCChhhhhhhcc---CC------------------------------------CCceeEE--------------Eeecc
Q 048684          175 PHGSLASLLYAKW---LP------------------------------------DKWTHHI--------------VSKIE  201 (363)
Q Consensus       175 ~~gsL~~~l~~~~---~~------------------------------------~~~~~~~--------------~~~~~  201 (363)
                       +|+|.+++....   ++                                    ......+              .....
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV  159 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence             788877664211   00                                    0000000              01234


Q ss_pred             cccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh-----------------hcCCcCCC
Q 048684          202 GTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE-----------------LVDPTLGD  263 (363)
Q Consensus       202 gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~-----------------~~~~~~~~  263 (363)
                      |+..|+|||++.. ..++.++||||||+++|||++|++||.........+.....                 .....++.
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07830         160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ  239 (283)
T ss_pred             CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence            7888999998854 45899999999999999999999999765432222211100                 00000000


Q ss_pred             C-------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          264 A-------YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       264 ~-------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .       ..+.....+.+++.+||+.+|.+|||+.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0       000113568999999999999999999999864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=2.9e-26  Score=219.99  Aligned_cols=192  Identities=21%  Similarity=0.375  Sum_probs=148.0

Q ss_pred             CCcccccCceEEEEEEE-cCCcEEEEEEec---CCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC---eEEEEEc
Q 048684          101 ENLIGQGGYAEVYKGQL-EDGQFVAIKRLT---RGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHLILEL  173 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~---~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~lv~E~  173 (363)
                      ..+||+|+|-+||+|.. .+|..||.-.++   .....+..++|..|+.+|+.|+|||||++|.++.+..   ..+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            45799999999999984 457777764443   2234455789999999999999999999999877644   6789999


Q ss_pred             cCCCChhhhhhhc--------------------cCC---CCcee------------------------------EEEeec
Q 048684          174 SPHGSLASLLYAK--------------------WLP---DKWTH------------------------------HIVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~--------------------~~~---~~~~~------------------------------~~~~~~  200 (363)
                      +..|+|..|+...                    ++.   ....|                              ..+..+
T Consensus       125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv  204 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV  204 (632)
T ss_pred             ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence            9999999987511                    000   00000                              112346


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      .|||.|||||++. ..|+..+||||||++++||+|+..||..-......++.+..++.|..   +..-...++.++|.+|
T Consensus       205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s---l~kV~dPevr~fIekC  280 (632)
T KOG0584|consen  205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA---LSKVKDPEVREFIEKC  280 (632)
T ss_pred             ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH---hhccCCHHHHHHHHHH
Confidence            7999999999996 88999999999999999999999999988777777776665554432   2222233499999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      +.. ...|||+.|+|..
T Consensus       281 l~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  281 LAT-KSERLSAKELLKD  296 (632)
T ss_pred             hcC-chhccCHHHHhhC
Confidence            999 9999999999974

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.92  E-value=2.1e-25  Score=210.75  Aligned_cols=203  Identities=16%  Similarity=0.203  Sum_probs=142.5

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCeE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-----GGMH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~  168 (363)
                      ++|+..+.||.|+||.||+|. ..+|..||+|.+.... .......+.+|+.++..++||||+++++++..     ...+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            689999999999999999998 4569999999987543 22335678899999999999999999987642     2378


Q ss_pred             EEEEccCCCChhhhhhhcc-------------------------------------CCCCcee-----------------
Q 048684          169 LILELSPHGSLASLLYAKW-------------------------------------LPDKWTH-----------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~-----------------  194 (363)
                      +||||+. |+|.+++....                                     +......                 
T Consensus        85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  163 (334)
T cd07855          85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE  163 (334)
T ss_pred             EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence            9999996 57877663110                                     0000000                 


Q ss_pred             --EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh-----------------
Q 048684          195 --HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK-----------------  254 (363)
Q Consensus       195 --~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~-----------------  254 (363)
                        .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..........                 
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  243 (334)
T cd07855         164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR  243 (334)
T ss_pred             CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence              00123368889999999865 4689999999999999999999999976543221111000                 


Q ss_pred             --h---hcCCcCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          255 --E---LVDPTLGDA---YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       255 --~---~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                        .   .........   ..+.....+.+++.+||+.+|.+|||+.+++.+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~  296 (334)
T cd07855         244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF  296 (334)
T ss_pred             HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence              0   000000000   01123456999999999999999999999998654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=6.7e-25  Score=204.31  Aligned_cols=202  Identities=20%  Similarity=0.275  Sum_probs=137.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      -++|+..+.||+|+||.||+|.. .+|+.||||.+.... .......+.+|+.++++++||||+++++++....      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            35799999999999999999985 568999999986433 2222346678999999999999999999876532      


Q ss_pred             ---eEEEEEccCCCChhhhhhhcc--------------------------------------CCCCceeE----------
Q 048684          167 ---MHLILELSPHGSLASLLYAKW--------------------------------------LPDKWTHH----------  195 (363)
Q Consensus       167 ---~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~----------  195 (363)
                         .++||||+.+ +|.+++....                                      +.......          
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF  169 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence               4899999975 6665543110                                      00000000          


Q ss_pred             ---------EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHH--HhhhhhcCCcC--
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW--SSMKELVDPTL--  261 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~--~~~~~~~~~~~--  261 (363)
                               ......++..|+|||++.+. .++.++|||||||++|||+||++||..........  ..+.+..++..  
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (310)
T cd07865         170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP  249 (310)
T ss_pred             cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence                     00122467789999998665 47899999999999999999999997654321110  11111100000  


Q ss_pred             -------------CCCC---------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 -------------GDAY---------NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 -------------~~~~---------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                   +...         .......+.+++.+||..||.+|||+.+++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence                         0000         00012346789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=8.4e-25  Score=203.12  Aligned_cols=204  Identities=21%  Similarity=0.291  Sum_probs=139.2

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-----  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----  165 (363)
                      ...++|+..+.||.|+||.||+|.. .+|+.||||.+.... .......+.+|+.+++.++||||+++++++.+.     
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3457899999999999999999996 468999999997543 222345678899999999999999999987653     


Q ss_pred             ------CeEEEEEccCCCChhhhhhhcc--------------------------------------CCCCceeEE-----
Q 048684          166 ------GMHLILELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI-----  196 (363)
Q Consensus       166 ------~~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~-----  196 (363)
                            ..++|+||+++ +|.+++....                                      +.......+     
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~  162 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL  162 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence                  37899999986 5544443110                                      000000000     


Q ss_pred             -----------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----
Q 048684          197 -----------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----  259 (363)
Q Consensus       197 -----------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----  259 (363)
                                 .....++..|+|||++.+. .++.++|||||||++|||++|++||..................+     
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (302)
T cd07864         163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW  242 (302)
T ss_pred             cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence                       0112346779999988654 57899999999999999999999997654322111111100000     


Q ss_pred             -cCC---------------C---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -TLG---------------D---AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -~~~---------------~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       .+.               .   ......+..+.+++..||+.||.+||++.+++.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             000               0   0001124568999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.5e-25  Score=212.81  Aligned_cols=210  Identities=15%  Similarity=0.213  Sum_probs=144.5

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG  165 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  165 (363)
                      ..++...+++|...+.||+|+||.||+|. ..+|..||||.+.... .......+.+|+.++.+++||||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            45667788999999999999999999998 4678999999987543 222345688999999999999999999976532


Q ss_pred             -------CeEEEEEccCCCChhhhhhhccCC------------------------------------CCceeE-------
Q 048684          166 -------GMHLILELSPHGSLASLLYAKWLP------------------------------------DKWTHH-------  195 (363)
Q Consensus       166 -------~~~lv~E~~~~gsL~~~l~~~~~~------------------------------------~~~~~~-------  195 (363)
                             ..+++++++ +++|.+++....+.                                    ......       
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~  167 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  167 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccc
Confidence                   256777776 67887654311000                                    000000       


Q ss_pred             -----EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh---------------
Q 048684          196 -----IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK---------------  254 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~---------------  254 (363)
                           ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||..............               
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T cd07877         168 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS  247 (345)
T ss_pred             ccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence                 0112357889999999866 5689999999999999999999999975432221111000               


Q ss_pred             -------hhcCCcCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          255 -------ELVDPTLGDAY---NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       255 -------~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                             ...+......+   .......+.+++..|++.||.+||++.+++.+-
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  301 (345)
T cd07877         248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  301 (345)
T ss_pred             HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence                   00000000000   001234588999999999999999999999764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.92  E-value=1.6e-25  Score=205.61  Aligned_cols=199  Identities=19%  Similarity=0.297  Sum_probs=141.2

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |...+.||.|++|.||+|.. .+|+.+|+|.+...... .....+..|+.+++.++||||+++++++..+. .++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            56678899999999999985 56899999998754322 34567889999999999999999999776655 89999999


Q ss_pred             CCCChhhhhhhcc--------------------------------------CCCCceeEE---------------Eeecc
Q 048684          175 PHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------VSKIE  201 (363)
Q Consensus       175 ~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------~~~~~  201 (363)
                      ++ +|.+++....                                      +.......+               .....
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~  159 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYV  159 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCcc
Confidence            85 7776654210                                      000000000               01134


Q ss_pred             cccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----------------CC-
Q 048684          202 GTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----------------LG-  262 (363)
Q Consensus       202 gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----------------~~-  262 (363)
                      ++..|+|||.+.+. .++.++|||||||++|+|+||+.||...+.............++.                 .. 
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK  239 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc
Confidence            67789999999876 789999999999999999999999976543222111111110000                 00 


Q ss_pred             ------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 ------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 ------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                            ....+.....+.+++..||+.||.+||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         240 KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                  00112345679999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.92  E-value=3.4e-25  Score=209.58  Aligned_cols=201  Identities=14%  Similarity=0.191  Sum_probs=139.7

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~  166 (363)
                      .++|...+.||+|+||+||+|. ..+|..||||.+.... .......+.+|+.++..++||||+++++++...      .
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            3578899999999999999998 4678999999986432 222345678999999999999999999976543      2


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------c------------CCCCcee---------------
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------W------------LPDKWTH---------------  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------~------------~~~~~~~---------------  194 (363)
                      .++|+||+. ++|.+++...                         .            +......               
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  162 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG  162 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence            689999996 5776655310                         0            0000000               


Q ss_pred             EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh--------------------
Q 048684          195 HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM--------------------  253 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~--------------------  253 (363)
                      .......|+..|+|||++.. ..++.++|||||||++|+|++|++||.+.+.........                    
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR  242 (337)
T ss_pred             ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence            01112357888999999865 468999999999999999999999997643211110000                    


Q ss_pred             --hhhc----CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          254 --KELV----DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       254 --~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        ....    .+... ...+..+..+.+++.+||+.+|.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         243 RYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence              0000    00000 0111234568999999999999999999999986

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=202.01  Aligned_cols=203  Identities=16%  Similarity=0.222  Sum_probs=144.8

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecC-CCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc------C
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE------G  165 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~  165 (363)
                      ....|...+.||.|+||.|..+. ..+|..||||++.. -...-..++-.+|+.+|+.++|+|||.+.+....      .
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            34567778899999999999998 57799999999862 2333456788999999999999999999997654      2


Q ss_pred             CeEEEEEccCCCChhhhhhhcc------------------------------------------------------CCCC
Q 048684          166 GMHLILELSPHGSLASLLYAKW------------------------------------------------------LPDK  191 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------~~~~  191 (363)
                      +.|+|+|+|. .+|...|....                                                      ....
T Consensus       100 DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~  178 (359)
T KOG0660|consen  100 DVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF  178 (359)
T ss_pred             eeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc
Confidence            3899999995 47776664110                                                      0000


Q ss_pred             ceeEEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh------------------
Q 048684          192 WTHHIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS------------------  252 (363)
Q Consensus       192 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~------------------  252 (363)
                      .....++..+.|.+|.|||++.. ..||.+.||||.|||+.||++|++-|.+.+........                  
T Consensus       179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~  258 (359)
T KOG0660|consen  179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE  258 (359)
T ss_pred             CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence            01122345568999999999854 57999999999999999999999999876432211110                  


Q ss_pred             ----hhhhcCCcCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          253 ----MKELVDPTLGDAY---NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       253 ----~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                          ............+   .+......++|+.+||..||.+|+|+.|.+.+
T Consensus       259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                0000111111111   11233458899999999999999999999975

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.92  E-value=6.5e-26  Score=205.56  Aligned_cols=195  Identities=21%  Similarity=0.323  Sum_probs=137.7

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----C--eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG----G--MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~l  169 (363)
                      .|...+++|.|+||.||+|. ..++..||||+.-.+..-     -.+|+++|+.++|||||+|.-++...    .  ..+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            46667899999999999998 466899999998654321     13799999999999999999866532    1  358


Q ss_pred             EEEccCCCChhhhhhh-----ccCCC--------------------Ccee-----------------EEE----------
Q 048684          170 ILELSPHGSLASLLYA-----KWLPD--------------------KWTH-----------------HIV----------  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~-----~~~~~--------------------~~~~-----------------~~~----------  197 (363)
                      ||||||. +|..++..     ..++.                    ...|                 .++          
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~  178 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK  178 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence            9999997 88887752     11110                    0000                 000          


Q ss_pred             ----eecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh------------------
Q 048684          198 ----SKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK------------------  254 (363)
Q Consensus       198 ----~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~------------------  254 (363)
                          .....|..|.|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+.......++.                  
T Consensus       179 ~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~  258 (364)
T KOG0658|consen  179 GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT  258 (364)
T ss_pred             CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence                011246679999999876 599999999999999999999999998754333222111                  


Q ss_pred             hhcCCcCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          255 ELVDPTLGDA-----YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       255 ~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +...|.+...     +......++.+++.+++..+|..|.++.|++.+
T Consensus       259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            0111111111     222345669999999999999999999999965

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.92  E-value=1.5e-24  Score=199.56  Aligned_cols=199  Identities=19%  Similarity=0.292  Sum_probs=137.9

Q ss_pred             CccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhC---CCCCcceEEEEEEcCC------
Q 048684           98 FSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHV---DHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~------  166 (363)
                      |++.+.||.|+||.||+|... +|+.||||.+..... +.....+.+|+.++.++   +||||+++++++...+      
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999964 589999999974332 22345677888877766   5999999999876543      


Q ss_pred             eEEEEEccCCCChhhhhhhcc---CC------------------------------------CCceeE------------
Q 048684          167 MHLILELSPHGSLASLLYAKW---LP------------------------------------DKWTHH------------  195 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~---~~------------------------------------~~~~~~------------  195 (363)
                      .+++|||+.+ +|.+++....   ++                                    ......            
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            7899999974 7776653210   00                                    000000            


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc----------------
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV----------------  257 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~----------------  257 (363)
                        ......+++.|+|||++.+..++.++|||||||++|||++|.+||.................                
T Consensus       160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07838         160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS  239 (287)
T ss_pred             CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence              01123467889999999999999999999999999999999999976543322222111100                


Q ss_pred             --CCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 --DPTLG---DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 --~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .....   ....+.....+.+++..||+.||.+||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence              00000   00112334668899999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-26  Score=200.56  Aligned_cols=200  Identities=23%  Similarity=0.302  Sum_probs=143.2

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEE-EcCCeEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYG-VEGGMHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~-~~~~~~lv~E~  173 (363)
                      +.+....||.|+||+|++-. .++|+..|||++.....+...++++.|.+...+- ++||||++||.+ .+++.|+.||.
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            44455779999999999998 5779999999998777766678999999866554 799999999954 56669999999


Q ss_pred             cCCCChhhhhh------hccCCCCceeE------------------------------------------EEee------
Q 048684          174 SPHGSLASLLY------AKWLPDKWTHH------------------------------------------IVSK------  199 (363)
Q Consensus       174 ~~~gsL~~~l~------~~~~~~~~~~~------------------------------------------~~~~------  199 (363)
                      |.- ||..+-.      ...+++...-+                                          ++.+      
T Consensus       145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA  223 (361)
T KOG1006|consen  145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA  223 (361)
T ss_pred             Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH
Confidence            974 6654432      01111110000                                          1111      


Q ss_pred             ---cccccCCCCchhhc--cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCC-CHHHHHHH
Q 048684          200 ---IEGTFGYLPPEFFM--HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAY-NTEQLTRL  273 (363)
Q Consensus       200 ---~~gt~~y~aPE~~~--~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l  273 (363)
                         -+|...|||||-+.  +..|+-+||||||||+|||++||+.||...+........+...-.|.+.... .-+.+..+
T Consensus       224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~  303 (361)
T KOG1006|consen  224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSM  303 (361)
T ss_pred             hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHH
Confidence               14888899999985  3459999999999999999999999998765433332233222223332211 12356679


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..++..|+-+|...||...++...
T Consensus       304 ~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  304 VRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHHHHhhcccccCcchhhhhcC
Confidence            999999999999999999999864

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.9e-25  Score=209.78  Aligned_cols=203  Identities=18%  Similarity=0.256  Sum_probs=141.7

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----  166 (363)
                      ..++|...+.||+|+||.||+|. ..+|..||||.+.... .......+.+|+.+++.++||||+++++++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            46789999999999999999998 5579999999986433 2233456889999999999999999999776432     


Q ss_pred             --eEEEEEccCCCChhhhhhhccCCC------------------------------------CceeEE------------
Q 048684          167 --MHLILELSPHGSLASLLYAKWLPD------------------------------------KWTHHI------------  196 (363)
Q Consensus       167 --~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~~~~~------------  196 (363)
                        .++||||+ +++|.+++....++.                                    .....+            
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence              48999999 678876653211100                                    000000            


Q ss_pred             EeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc------------------
Q 048684          197 VSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV------------------  257 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~------------------  257 (363)
                      .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.................                  
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNY  251 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHH
Confidence            012347889999999876 4589999999999999999999999986543221111110000                  


Q ss_pred             -C--CcCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 -D--PTLGD----AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 -~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       .  +....    .........+.+++.+|++.||.+|||+.+++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         252 VKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             HHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             0  00000    0011223458899999999999999999999964

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=1.4e-24  Score=200.56  Aligned_cols=199  Identities=19%  Similarity=0.277  Sum_probs=140.9

Q ss_pred             CCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCCc---hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-e
Q 048684           97 NFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP---EEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~  167 (363)
                      +|...+.||+|+||.||++..    .++..||||.+.....   ......+.+|+.++.++ +||||+++++++..+. .
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            467788999999999999974    3578899999864321   22345788999999999 5999999998776655 7


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE---------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------------  195 (363)
                      ++||||+++|+|.+++....                                     +.......               
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            89999999999987764110                                     00000000               


Q ss_pred             -EEeecccccCCCCchhhccCC--CCccceEEechhHHHHHHhCCCCCCCchhhHH---HHHhhhhhcCCcCCCCCCHHH
Q 048684          196 -IVSKIEGTFGYLPPEFFMHGI--ADEKTDVYAYGVLLLEIITGRQALDSSQKSLV---MWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  269 (363)
                       ......|++.|+|||++.+..  .+.++||||||+++|||++|..||........   ....... ..+..+..++   
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---  236 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-SKPPFPKTMS---  236 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-cCCCCCcccC---
Confidence             011235788999999987665  78999999999999999999999964322111   1111111 1122222233   


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                       ..+.+++.+||+.||..|||+.++...|..
T Consensus       237 -~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         237 -AEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             -HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence             348899999999999999998877766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.92  E-value=3.1e-24  Score=197.49  Aligned_cols=192  Identities=22%  Similarity=0.297  Sum_probs=132.6

Q ss_pred             cccccCceEEEEEEE-cCCcEEEEEEecCCCch--hHHHHHHHHHH---HHHhCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684          103 LIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE--EMTTDYLSELG---IIVHVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~--~~~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      +||+|+||.||++.. .+|+.||+|.+......  .....+..|..   .+...+||||+.+++++...+ .++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999984 56899999998654311  11223444443   344467999999999877655 889999999


Q ss_pred             CCChhhhhhhcc-------------------------------------CCCCcee-------------EEEeecccccC
Q 048684          176 HGSLASLLYAKW-------------------------------------LPDKWTH-------------HIVSKIEGTFG  205 (363)
Q Consensus       176 ~gsL~~~l~~~~-------------------------------------~~~~~~~-------------~~~~~~~gt~~  205 (363)
                      +|+|..++....                                     +......             .......|+..
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence            999987763110                                     0000000             00112358999


Q ss_pred             CCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHH-HHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          206 YLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLV-MWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       206 y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      |+|||++.++ .++.++|||||||++|||++|+.||........ ..........+.++...    +..+.+++.+||..
T Consensus       161 y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----s~~~~~li~~~l~~  236 (278)
T cd05606         161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF----SPELRSLLEGLLQR  236 (278)
T ss_pred             CcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC----CHHHHHHHHHHhhc
Confidence            9999999755 689999999999999999999999976532111 11111112233333333    34599999999999


Q ss_pred             CCCCCC-----CHHHHHHHh
Q 048684          284 TSACRP-----QMSKVVQAL  298 (363)
Q Consensus       284 dP~~RP-----t~~evl~~L  298 (363)
                      +|..||     ++.+++++-
T Consensus       237 ~p~~R~~~~~~~~~~ll~~~  256 (278)
T cd05606         237 DVNRRLGCLGRGAQEVKEHP  256 (278)
T ss_pred             CHHhccCCCCCCHHHHHhCc
Confidence            999999     999998653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.92  E-value=1.7e-24  Score=200.03  Aligned_cols=197  Identities=20%  Similarity=0.296  Sum_probs=139.3

Q ss_pred             CCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCCc---hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-e
Q 048684           97 NFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP---EEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~  167 (363)
                      +|+..+.||.|+||.||++..    .+|..||+|.+.....   ....+.+.+|+.++..+ +|+||+++++++..+. .
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            477888999999999999975    3689999999875321   12346788999999999 5999999998776655 7


Q ss_pred             EEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeEE--------------
Q 048684          168 HLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI--------------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~--------------  196 (363)
                      ++||||+++|+|.+++....                                     +.......+              
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            89999999999988874110                                     000000000              


Q ss_pred             --EeecccccCCCCchhhccC--CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--cCCcCCCCCCHHHH
Q 048684          197 --VSKIEGTFGYLPPEFFMHG--IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--VDPTLGDAYNTEQL  270 (363)
Q Consensus       197 --~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  270 (363)
                        .....|+..|+|||++...  .++.++|||||||++|+|++|..||................  ..+..+    ....
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  236 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP----QEMS  236 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCC----ccCC
Confidence              0123478899999998753  47889999999999999999999997432211111111111  112222    2233


Q ss_pred             HHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 048684          271 TRLLLIASACINQTSACRP-----QMSKVVQA  297 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RP-----t~~evl~~  297 (363)
                      ..+.+++.+||+.||..||     ++.+++.+
T Consensus       237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            4588999999999999997     67777654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=1.7e-24  Score=204.44  Aligned_cols=204  Identities=18%  Similarity=0.244  Sum_probs=139.4

Q ss_pred             CCCcc-CCcccccCceEEEEEEE-cCCcEEEEEEecCCCchh-------------HHHHHHHHHHHHHhCCCCCcceEEE
Q 048684           96 DNFSH-ENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEE-------------MTTDYLSELGIIVHVDHPNIAKMIG  160 (363)
Q Consensus        96 ~~f~~-~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~-------------~~~~~~~E~~~l~~l~H~niv~l~~  160 (363)
                      ++|.. .+.||.|+||+||+|.. .+|+.||||.+.......             ....+.+|+.++..++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            45653 46799999999999984 568999999986432211             1125789999999999999999999


Q ss_pred             EEEcCC-eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCcee--------
Q 048684          161 YGVEGG-MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTH--------  194 (363)
Q Consensus       161 ~~~~~~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~--------  194 (363)
                      ++...+ .++||||+. |+|.+++....                                     +......        
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~  166 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA  166 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence            877665 789999997 58877663110                                     0000000        


Q ss_pred             ---------------------EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh
Q 048684          195 ---------------------HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS  252 (363)
Q Consensus       195 ---------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~  252 (363)
                                           .......+++.|+|||++.+. .++.++|||||||++|||+||.+||............
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i  246 (335)
T PTZ00024        167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI  246 (335)
T ss_pred             eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                                 000112357789999998764 4799999999999999999999999866543222211


Q ss_pred             hhhhcCCcC-------------------CCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          253 MKELVDPTL-------------------GDA---YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       253 ~~~~~~~~~-------------------~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ......+..                   +..   ........+.+++..||+.+|.+|||+.+++.+-..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            111100000                   000   001124558899999999999999999999976543

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.92  E-value=1.9e-24  Score=201.85  Aligned_cols=200  Identities=17%  Similarity=0.289  Sum_probs=136.7

Q ss_pred             CCccCCcccccCceEEEEEEE-c--CCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C-eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-E--DGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--G-MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~--~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~-~~  168 (363)
                      .|...+.||+|+||.||+|.. .  +|..||||.+....  .......+.+|+.++..++||||+++++++.+.  . .+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            477788999999999999985 3  58899999997632  122346778999999999999999999988776  4 78


Q ss_pred             EEEEccCCCChhhhhhhc------------------------------------------cCCC----CceeEE------
Q 048684          169 LILELSPHGSLASLLYAK------------------------------------------WLPD----KWTHHI------  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~------------------------------------------~~~~----~~~~~~------  196 (363)
                      +||||+.+ +|.+++...                                          .+..    .....+      
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999985 554433100                                          0000    000000      


Q ss_pred             ------------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhH--------HHHHhhhh
Q 048684          197 ------------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSL--------VMWSSMKE  255 (363)
Q Consensus       197 ------------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~--------~~~~~~~~  255 (363)
                                  ....++++.|+|||++.+. .++.++|||||||++|+|++|++||.......        .....+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence                        0123467889999988764 58999999999999999999999997543221        00000000


Q ss_pred             hcC---------------------CcCCCCCC----H-------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          256 LVD---------------------PTLGDAYN----T-------EQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       256 ~~~---------------------~~~~~~~~----~-------~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+.                     ......++    .       .....+.+++.+||+.||.+|||+.+++.+
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            000                     00000011    0       123458899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.92  E-value=6.9e-25  Score=206.57  Aligned_cols=201  Identities=15%  Similarity=0.179  Sum_probs=142.6

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------CeE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------GMH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~  168 (363)
                      +|.+.+.||.|+||.||+|.. .+|..||||.+..... ....+.+..|+.+++.++||||+++++++...      ..|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            477889999999999999995 4589999999875432 33456899999999999999999999987654      378


Q ss_pred             EEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE----------------
Q 048684          169 LILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH----------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~----------------  195 (363)
                      +||||+++ +|.+++....                                     +.......                
T Consensus        81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~  159 (330)
T cd07834          81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE  159 (330)
T ss_pred             EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence            99999984 7776653110                                     00000000                


Q ss_pred             --EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc------------
Q 048684          196 --IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT------------  260 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~------------  260 (363)
                        ......+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+................+.            
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  239 (330)
T cd07834         160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA  239 (330)
T ss_pred             cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence              01223478889999999887 799999999999999999999999976543222111111000000            


Q ss_pred             ----------CCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          261 ----------LGD---AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       261 ----------~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                ...   .........+.+++..||+.+|.+|||+.+++.+-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  290 (330)
T cd07834         240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP  290 (330)
T ss_pred             hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence                      000   00111244588999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=206.25  Aligned_cols=198  Identities=23%  Similarity=0.381  Sum_probs=143.5

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEec--CCCchh----HHHHHHHHHHHHHhCCCCCcceEEEEEEcC-C-e
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLT--RGSPEE----MTTDYLSELGIIVHVDHPNIAKMIGYGVEG-G-M  167 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~--~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~-~  167 (363)
                      +|-.+.+||+|||+.||++. +...+.||||+-.  +++.++    ..+...+|..|.+.|+||.||++|+|+.-+ + +
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            46677889999999999998 6668899999854  333332    345567999999999999999999987543 3 8


Q ss_pred             EEEEEccCCCChhhhhhhc-----------------------------------------------------------cC
Q 048684          168 HLILELSPHGSLASLLYAK-----------------------------------------------------------WL  188 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~-----------------------------------------------------------~~  188 (363)
                      |-|+|||+|.+|.-||...                                                           .+
T Consensus       544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM  623 (775)
T ss_pred             eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence            8999999999998887510                                                           00


Q ss_pred             CC-----CceeEEEeecccccCCCCchhhccC----CCCccceEEechhHHHHHHhCCCCCCCchhh--HHHHHhhhhhc
Q 048684          189 PD-----KWTHHIVSKIEGTFGYLPPEFFMHG----IADEKTDVYAYGVLLLEIITGRQALDSSQKS--LVMWSSMKELV  257 (363)
Q Consensus       189 ~~-----~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--~~~~~~~~~~~  257 (363)
                      .+     .......++.+||++|++||++.-+    +.+.|+||||.|||+|.++.|+.||......  ...+..+....
T Consensus       624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAt  703 (775)
T KOG1151|consen  624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKAT  703 (775)
T ss_pred             cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcce
Confidence            00     0112245567899999999999654    5799999999999999999999999875432  22222221111


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      .-.++.  .+..+.+...+|.+||+..-.+|....++..
T Consensus       704 EVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  704 EVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             eccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            111111  1223344889999999999999998888764

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.7e-24  Score=195.29  Aligned_cols=187  Identities=21%  Similarity=0.281  Sum_probs=138.4

Q ss_pred             ccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      ||.|+||.||++.. .+++.||+|.+.....  ......+..|+.+++.++||||+++++.+..+. .++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            69999999999985 4589999999875432  223567899999999999999999999776655 8999999999999


Q ss_pred             hhhhhhcc-CC------------------------------------CCceeE---------------EEeecccccCCC
Q 048684          180 ASLLYAKW-LP------------------------------------DKWTHH---------------IVSKIEGTFGYL  207 (363)
Q Consensus       180 ~~~l~~~~-~~------------------------------------~~~~~~---------------~~~~~~gt~~y~  207 (363)
                      .+++.... ++                                    ......               ......|+..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence            88874210 00                                    000000               011235788999


Q ss_pred             CchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC
Q 048684          208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSAC  287 (363)
Q Consensus       208 aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  287 (363)
                      +||.+.+...+.++|+||||+++|+|++|..||...+..........  ....++...    ...+.+++.+||..||.+
T Consensus       161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~----~~~l~~~i~~~l~~~p~~  234 (250)
T cd05123         161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFL----SPEARDLISGLLQKDPTK  234 (250)
T ss_pred             ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCC----CHHHHHHHHHHhcCCHhh
Confidence            99999888899999999999999999999999976654322222222  122222333    344899999999999999


Q ss_pred             CCCH---HHHHH
Q 048684          288 RPQM---SKVVQ  296 (363)
Q Consensus       288 RPt~---~evl~  296 (363)
                      ||++   .++++
T Consensus       235 R~~~~~~~~l~~  246 (250)
T cd05123         235 RLGSGGAEEIKA  246 (250)
T ss_pred             CCCcccHHHHHh
Confidence            9999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.91  E-value=1.8e-25  Score=195.20  Aligned_cols=199  Identities=19%  Similarity=0.365  Sum_probs=147.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++.+.+..||.|+.|.|++++. .+|..+|||.+.+....+..++++..+.++.+.+ +|+||+.+||+..+. .++.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            3445566799999999999984 5699999999988776677889999999887764 999999999887654 778888


Q ss_pred             ccCCCChhhhhhh---------------------------------cc------CCCCceeE--------------EEee
Q 048684          173 LSPHGSLASLLYA---------------------------------KW------LPDKWTHH--------------IVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~---------------------------------~~------~~~~~~~~--------------~~~~  199 (363)
                      .|.- .++.+|..                                 ..      +.+.....              ..+.
T Consensus       172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr  250 (391)
T KOG0983|consen  172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR  250 (391)
T ss_pred             HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence            7742 22222210                                 00      00100000              1123


Q ss_pred             cccccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       200 ~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      -+|.+.|||||-+.   ...|+.++|||||||+|+||+||..||.+...+......+....+|.++...  ..+..+.++
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~--gFSp~F~~f  328 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHM--GFSPDFQSF  328 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCccc--CcCHHHHHH
Confidence            46999999999985   3479999999999999999999999999876665555555444456654332  255669999


Q ss_pred             HHHccccCCCCCCCHHHHHHH
Q 048684          277 ASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~  297 (363)
                      +..||.+|+.+||...+++++
T Consensus       329 v~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  329 VKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHHHhhcCcccCcchHHHhcC
Confidence            999999999999999999975

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.91  E-value=2.5e-25  Score=204.22  Aligned_cols=199  Identities=20%  Similarity=0.313  Sum_probs=139.8

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |+..+.||+|+||.||+|.. .+++.||+|.+.... .......+..|+.+++.++|+||+++++++.+.. .++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            55667899999999999985 459999999997653 2333467889999999999999999999877655 89999999


Q ss_pred             CCCChhhhhhhc--cC------------------------------------CCCceeEE---------------Eeecc
Q 048684          175 PHGSLASLLYAK--WL------------------------------------PDKWTHHI---------------VSKIE  201 (363)
Q Consensus       175 ~~gsL~~~l~~~--~~------------------------------------~~~~~~~~---------------~~~~~  201 (363)
                      + ++|.+++...  .+                                    .......+               .....
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEV  159 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccc
Confidence            8 5888777422  00                                    00000000               01123


Q ss_pred             cccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh--------------hhhh--cCCcCCC-
Q 048684          202 GTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS--------------MKEL--VDPTLGD-  263 (363)
Q Consensus       202 gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~--------------~~~~--~~~~~~~-  263 (363)
                      ++..|+|||++.+. .++.++|||||||++|||++|++||............              ....  .+...+. 
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07829         160 VTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKF  239 (282)
T ss_pred             cCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccccc
Confidence            46779999999776 7899999999999999999999999765432211111              0000  0000000 


Q ss_pred             ------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          264 ------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       264 ------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                            ...+.....+.+++..||..||.+||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         240 PPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             CccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence                  0001124569999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=1.9e-24  Score=201.42  Aligned_cols=202  Identities=20%  Similarity=0.287  Sum_probs=136.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||.|+||.||+|.. .+|+.||||.+..... +.....+.+|+++++.++||||+++++++...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            47899999999999999999985 5689999999864432 22234677899999999999999999865432       


Q ss_pred             --CeEEEEEccCCCChhhhhhh--------------------------cc------------CCCCcee-----------
Q 048684          166 --GMHLILELSPHGSLASLLYA--------------------------KW------------LPDKWTH-----------  194 (363)
Q Consensus       166 --~~~lv~E~~~~gsL~~~l~~--------------------------~~------------~~~~~~~-----------  194 (363)
                        ..++||||+.+ +|...+..                          ..            +......           
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence              25899999875 45443321                          00            0000000           


Q ss_pred             ---------------EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh----
Q 048684          195 ---------------HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK----  254 (363)
Q Consensus       195 ---------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~----  254 (363)
                                     .......|++.|+|||++.+. .++.++|||||||++|||++|++||.+............    
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence                           001123467889999988654 589999999999999999999999976543221111110    


Q ss_pred             -------------hhcCCcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          255 -------------ELVDPTLGDAYN-------TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       255 -------------~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                   ...+.......+       ......+.+++.+||+.||.+|||+.+++.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence                         000000000000       1122458899999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.5e-26  Score=231.00  Aligned_cols=210  Identities=20%  Similarity=0.245  Sum_probs=154.7

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEE-E
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYG-V  163 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~  163 (363)
                      ..+++-..++|.+.++||+|+||.|..++. .++++||+|++++...  .....-|..|-.+|..-+.+.||+++-.+ .
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            446666778999999999999999999984 6799999999986321  12356789999999999999999998744 4


Q ss_pred             cCCeEEEEEccCCCChhhhhhhcc-CCCCcee------------------------------------------------
Q 048684          164 EGGMHLILELSPHGSLASLLYAKW-LPDKWTH------------------------------------------------  194 (363)
Q Consensus       164 ~~~~~lv~E~~~~gsL~~~l~~~~-~~~~~~~------------------------------------------------  194 (363)
                      +..+|+|||||+||+|-.++.... +|++|..                                                
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            555999999999999988875322 2222211                                                


Q ss_pred             ----EEEeecccccCCCCchhhc----c-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCC
Q 048684          195 ----HIVSKIEGTFGYLPPEFFM----H-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAY  265 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (363)
                          -.+...+|||.|++||++.    + +.|+..+|+||+||++|||+.|..||..+.....+.+++...-.-.++.  
T Consensus       227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~--  304 (1317)
T KOG0612|consen  227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD--  304 (1317)
T ss_pred             CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc--
Confidence                1123346999999999994    3 5799999999999999999999999998766555555444321122221  


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC---HHHHHHHhhc
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQ---MSKVVQALRG  300 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt---~~evl~~L~~  300 (363)
                      ..+.+....+||...+ -+|..|..   +.++-.+...
T Consensus       305 ~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF  341 (1317)
T KOG0612|consen  305 ETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFF  341 (1317)
T ss_pred             ccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccc
Confidence            1224455777777665 46777877   9998876543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.91  E-value=4.3e-25  Score=209.43  Aligned_cols=204  Identities=17%  Similarity=0.252  Sum_probs=141.2

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----  166 (363)
                      ..++|.....||+|+||.||+|.. .++..||||.+.... .......+.+|+.+++.++||||+++++++....     
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            457899999999999999999985 468899999986432 2233466788999999999999999998554322     


Q ss_pred             --eEEEEEccCCCChhhhhhhccCCC------------------------------------CceeE------------E
Q 048684          167 --MHLILELSPHGSLASLLYAKWLPD------------------------------------KWTHH------------I  196 (363)
Q Consensus       167 --~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~~~~------------~  196 (363)
                        .++|+||+ +++|.+++....++.                                    .....            .
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE  171 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence              78999998 568877764211100                                    00000            0


Q ss_pred             EeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-------------------
Q 048684          197 VSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-------------------  256 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-------------------  256 (363)
                      .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||................                   
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  251 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY  251 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHH
Confidence            112357888999999865 368899999999999999999999997654322111111000                   


Q ss_pred             ---cCCcCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          257 ---VDPTLGDAY---NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       257 ---~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                         +.......+   .......+.+++.+||+.||.+|||+.+|+.+-
T Consensus       252 ~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~  299 (343)
T cd07851         252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP  299 (343)
T ss_pred             HHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence               000000000   011245689999999999999999999998753

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.91  E-value=2.9e-24  Score=207.66  Aligned_cols=201  Identities=19%  Similarity=0.268  Sum_probs=143.4

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-C-----CCcceEEEEEEcCC-eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-H-----PNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~-~~  168 (363)
                      .|.+.+.||+|+||.|-+|. ..+++.||||+++...  ....+-..|+.+|..|+ |     -|+|++++|+...+ +|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            67889999999999999998 6779999999997543  34566778999999996 3     48999999877554 99


Q ss_pred             EEEEccCCCChhhhhhhcc---------------------------------CCCCc--------------------eeE
Q 048684          169 LILELSPHGSLASLLYAKW---------------------------------LPDKW--------------------THH  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~---------------------------------~~~~~--------------------~~~  195 (363)
                      ||+|.+.. +|.++|....                                 .|+..                    ...
T Consensus       265 iVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             eeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            99999975 8998886211                                 11100                    000


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh---------------------h
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM---------------------K  254 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~---------------------~  254 (363)
                      .....+-+..|.|||++.+.+|+.+.||||||||+.||+||.+-|.+.+.......++                     .
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~  423 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT  423 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence            0112234567999999999999999999999999999999988887765332221100                     0


Q ss_pred             h-----------------------------hcC---C-c---CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          255 E-----------------------------LVD---P-T---LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       255 ~-----------------------------~~~---~-~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .                             ..+   | .   +........-..+.+++.+||..||..|+|..+.+++-
T Consensus       424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp  503 (586)
T KOG0667|consen  424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP  503 (586)
T ss_pred             ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence            0                             000   0 0   00001112335689999999999999999999999865


Q ss_pred             hc
Q 048684          299 RG  300 (363)
Q Consensus       299 ~~  300 (363)
                      .-
T Consensus       504 fl  505 (586)
T KOG0667|consen  504 FL  505 (586)
T ss_pred             cc
Confidence            43

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.5e-25  Score=203.83  Aligned_cols=190  Identities=17%  Similarity=0.290  Sum_probs=147.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~l  169 (363)
                      ..+|..+.+||+|+||.|.++.. .+...+|||+++++..  ++..+--+.|-++|+-. +-|.+|+++.++..-+ +|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            35688999999999999999984 4567899999987642  22344456777787766 4789999998666544 999


Q ss_pred             EEEccCCCChhhhhhhc--------------------cC-----------------CCC---------------ceeEEE
Q 048684          170 ILELSPHGSLASLLYAK--------------------WL-----------------PDK---------------WTHHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~--------------------~~-----------------~~~---------------~~~~~~  197 (363)
                      ||||+.||+|--++..-                    .+                 ...               +.....
T Consensus       428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT  507 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT  507 (683)
T ss_pred             EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence            99999999998776410                    00                 000               001123


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ..+||||.|+|||++...+|+.++|+|||||+||||+.|.+||++++...+...+....+      .++...+.+...+.
T Consensus       508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv------syPKslSkEAv~ic  581 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV------SYPKSLSKEAVAIC  581 (683)
T ss_pred             eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC------cCcccccHHHHHHH
Confidence            467899999999999999999999999999999999999999999988877766655543      35666667788999


Q ss_pred             HHccccCCCCCCC
Q 048684          278 SACINQTSACRPQ  290 (363)
Q Consensus       278 ~~cl~~dP~~RPt  290 (363)
                      ...+...|.+|..
T Consensus       582 kg~ltK~P~kRLG  594 (683)
T KOG0696|consen  582 KGLLTKHPGKRLG  594 (683)
T ss_pred             HHHhhcCCccccC
Confidence            9999999999954

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.2e-24  Score=199.42  Aligned_cols=204  Identities=21%  Similarity=0.355  Sum_probs=144.6

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHh--CCCCCcceEEEEEEcCC---
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH--VDHPNIAKMIGYGVEGG---  166 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~---  166 (363)
                      +.........+.||+|.||.||+|.+. |..||||++....    .+.|.+|.+|...  |+|+||+.|++.-..+.   
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~  281 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW  281 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc-CCceEEEEecccc----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence            334456778889999999999999997 8899999997432    3578888887765  59999999998654332   


Q ss_pred             --eEEEEEccCCCChhhhhhhccCC----------------------------CCcee----------------------
Q 048684          167 --MHLILELSPHGSLASLLYAKWLP----------------------------DKWTH----------------------  194 (363)
Q Consensus       167 --~~lv~E~~~~gsL~~~l~~~~~~----------------------------~~~~~----------------------  194 (363)
                        +|||++|.++|||+|||....+.                            ....|                      
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence              79999999999999999511000                            00000                      


Q ss_pred             -------------EEEeecccccCCCCchhhccCCC------CccceEEechhHHHHHHhC----------CCCCCCchh
Q 048684          195 -------------HIVSKIEGTFGYLPPEFFMHGIA------DEKTDVYAYGVLLLEIITG----------RQALDSSQK  245 (363)
Q Consensus       195 -------------~~~~~~~gt~~y~aPE~~~~~~~------~~~sDvwS~Gvvl~elltG----------~~P~~~~~~  245 (363)
                                   .....-+||-.|||||++.....      -..+||||||.|+||++..          ..||.+...
T Consensus       362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp  441 (513)
T KOG2052|consen  362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP  441 (513)
T ss_pred             eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence                         00122369999999999965421      2478999999999999863          467764322


Q ss_pred             ---hHHHHH--hhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          246 ---SLVMWS--SMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       246 ---~~~~~~--~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                         +.....  .....+.|.++..+ +.+.+..+.+|+..||..+|..|.|+-.+-+.|..
T Consensus       442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~  502 (513)
T KOG2052|consen  442 SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK  502 (513)
T ss_pred             CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence               211111  11233445554443 44677889999999999999999999888776643

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.3e-24  Score=201.21  Aligned_cols=196  Identities=22%  Similarity=0.310  Sum_probs=144.6

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPE--EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      -+.|..-++||+||||.||-++ ..+|+.+|.|.+.+....  ......++|-.||.+++.+.||.+-..+...+ +++|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            3678999999999999999998 567999999998644321  12345678999999999999999976555554 9999


Q ss_pred             EEccCCCChhhhhhhcc---------------------------------------CCCCceeEE--------------E
Q 048684          171 LELSPHGSLASLLYAKW---------------------------------------LPDKWTHHI--------------V  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~~--------------~  197 (363)
                      |..|.||+|.-+|....                                       +.+....+|              .
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~  343 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI  343 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence            99999999988875110                                       111111111              2


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      .+-+||.+|||||++.++.|+...|+||+||+||||+.|+.||..... .+.+..+...+- .-+..++...+.++.+|.
T Consensus       344 ~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-Kvk~eEvdrr~~-~~~~ey~~kFS~eakslc  421 (591)
T KOG0986|consen  344 RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-KVKREEVDRRTL-EDPEEYSDKFSEEAKSLC  421 (591)
T ss_pred             ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-hhhHHHHHHHHh-cchhhcccccCHHHHHHH
Confidence            234799999999999999999999999999999999999999975432 222322222221 112335555666699999


Q ss_pred             HHccccCCCCCCCHH
Q 048684          278 SACINQTSACRPQMS  292 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~  292 (363)
                      ...|..||.+|....
T Consensus       422 ~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  422 EGLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHHccCHHHhccCC
Confidence            999999999996543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.90  E-value=6.4e-24  Score=192.50  Aligned_cols=201  Identities=17%  Similarity=0.262  Sum_probs=144.2

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCC-cceEEEEEEcC-------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPN-IAKMIGYGVEG-------  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~-------  165 (363)
                      ..|...++||+|+||+||+|+ ..+|+.||+|++..... ++.....++|+.+++.++|+| ||.+++++...       
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            456677889999999999998 67799999999976543 444566789999999999999 99999987653       


Q ss_pred             CeEEEEEccCCCChhhhhhhcc-----CCC------------------------------------Cce-----------
Q 048684          166 GMHLILELSPHGSLASLLYAKW-----LPD------------------------------------KWT-----------  193 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~-----~~~------------------------------------~~~-----------  193 (363)
                      .+++|+||+.. +|..++....     ++.                                    ...           
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence            36799999874 6666554211     000                                    000           


Q ss_pred             ----eEEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC---------
Q 048684          194 ----HHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP---------  259 (363)
Q Consensus       194 ----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~---------  259 (363)
                          ....+..++|.+|.|||++.+. .|+...||||+|||+.||+++++-|.+.........+..-.-.|         
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~  249 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS  249 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence                0012234589999999999887 69999999999999999999999998775533322221111111         


Q ss_pred             -------cCCCCC-CHH-------HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 -------TLGDAY-NTE-------QLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 -------~~~~~~-~~~-------~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                             ...... +..       ......+++.+|++.+|.+|.|+...+.+
T Consensus       250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                   111100 001       11368899999999999999999999976

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.90  E-value=2.9e-24  Score=218.65  Aligned_cols=70  Identities=24%  Similarity=0.502  Sum_probs=61.2

Q ss_pred             HHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      -+...+|+...+||+||||.||+++ .-||+.||||++.............+|+.+|++|+|||||+++..
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysA  545 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSA  545 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehh
Confidence            3566789999999999999999998 568999999999866555667789999999999999999999863

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.89  E-value=7.8e-24  Score=192.99  Aligned_cols=210  Identities=20%  Similarity=0.267  Sum_probs=155.6

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG  160 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~  160 (363)
                      ...++....+++....++-+|+||.||.|.+.      +-+.|-||.++...++-....|++|.-.+..+.|||+..+.+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            35566777788999999999999999999653      234577888876666555778999999999999999999999


Q ss_pred             EEEcCC--eEEEEEccCCCChhhhhhhccCCCCceeE-------------------------------------------
Q 048684          161 YGVEGG--MHLILELSPHGSLASLLYAKWLPDKWTHH-------------------------------------------  195 (363)
Q Consensus       161 ~~~~~~--~~lv~E~~~~gsL~~~l~~~~~~~~~~~~-------------------------------------------  195 (363)
                      .+.+..  .++++.++.-|+|..||..-...+....+                                           
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq  434 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ  434 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee
Confidence            887655  67888999999999998621111110000                                           


Q ss_pred             --EEee-----------------cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhh
Q 048684          196 --IVSK-----------------IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKE  255 (363)
Q Consensus       196 --~~~~-----------------~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~  255 (363)
                        +...                 --....||+||.+.+..|+.++|||||||+||||+| |+.||...+.... ...++.
T Consensus       435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm-~~ylkd  513 (563)
T KOG1024|consen  435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM-EHYLKD  513 (563)
T ss_pred             EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH-HHHHhc
Confidence              0000                 003356999999999999999999999999999998 9999987654332 222333


Q ss_pred             hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          256 LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..-.-    +-.++++|..++.-||..+|++||++.|++.-|...
T Consensus       514 GyRlaQ----P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF  555 (563)
T KOG1024|consen  514 GYRLAQ----PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF  555 (563)
T ss_pred             cceecC----CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence            322222    223444599999999999999999999999988543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.1e-23  Score=209.54  Aligned_cols=205  Identities=14%  Similarity=0.142  Sum_probs=130.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc--CCcEEEEEEec--------------C--CCchhHHHHHHHHHHHHHhCCCCCc
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE--DGQFVAIKRLT--------------R--GSPEEMTTDYLSELGIIVHVDHPNI  155 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~~~--------------~--~~~~~~~~~~~~E~~~l~~l~H~ni  155 (363)
                      ..++|.+.+.||+|+||+||++...  ++..+++|.+.              +  .........+.+|+.+|.+++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            3578999999999999999998742  22222222110              0  0112234568899999999999999


Q ss_pred             ceEEEEEEcCC-eEEEEEccCCCChhhhhhhcc------------------------------------------CCCCc
Q 048684          156 AKMIGYGVEGG-MHLILELSPHGSLASLLYAKW------------------------------------------LPDKW  192 (363)
Q Consensus       156 v~l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~------------------------------------------~~~~~  192 (363)
                      |++++++...+ .|+|++++.+ +|.+++....                                          +....
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            99999887766 7899998854 5544432100                                          00000


Q ss_pred             ee----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCC-CCCchhh--HHHHHhh
Q 048684          193 TH----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQA-LDSSQKS--LVMWSSM  253 (363)
Q Consensus       193 ~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P-~~~~~~~--~~~~~~~  253 (363)
                      ..                ......+||+.|+|||++.+..++.++|||||||++|||++|..+ +......  ......+
T Consensus       305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~  384 (501)
T PHA03210        305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII  384 (501)
T ss_pred             CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence            00                001124699999999999999999999999999999999998754 4332111  1111111


Q ss_pred             hhh--cCCcCC-------------------CCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          254 KEL--VDPTLG-------------------DAYNT-----EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       254 ~~~--~~~~~~-------------------~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...  ....++                   ...+.     .....+.+++.+||+.||.+|||+.|++.+-.
T Consensus       385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~  456 (501)
T PHA03210        385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL  456 (501)
T ss_pred             HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence            100  000000                   00000     01234677899999999999999999998644

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=6.7e-24  Score=197.59  Aligned_cols=199  Identities=26%  Similarity=0.397  Sum_probs=140.7

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHh--CCCCCcceEEEEEEcC-----CeE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH--VDHPNIAKMIGYGVEG-----GMH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~-----~~~  168 (363)
                      ......++||+|.||.||+|.+. ++.||||++..    +..+.|.+|-+|..-  ++|+||++|+++...+     +++
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc-CceeEEEecCH----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            44566788999999999999986 69999999974    336788888888765  5899999999976543     378


Q ss_pred             EEEEccCCCChhhhhhhccCCCC-----------------------------ceeE------------------------
Q 048684          169 LILELSPHGSLASLLYAKWLPDK-----------------------------WTHH------------------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~~~~-----------------------------~~~~------------------------  195 (363)
                      ||++|.+.|+|.+||....+.+.                             ..|+                        
T Consensus       285 LVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL  364 (534)
T ss_pred             EEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence            99999999999999962211000                             0000                        


Q ss_pred             ---------EEeecccccCCCCchhhccCC-CC-----ccceEEechhHHHHHHhCCCCC------------CCc---h-
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHGI-AD-----EKTDVYAYGVLLLEIITGRQAL------------DSS---Q-  244 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDvwS~Gvvl~elltG~~P~------------~~~---~-  244 (363)
                               -...-+||..|||||++.+.. +.     .+.||||+|.|||||++.-.-+            ...   . 
T Consensus       365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP  444 (534)
T KOG3653|consen  365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP  444 (534)
T ss_pred             EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC
Confidence                     011236999999999997653 22     4789999999999999864332            211   0 


Q ss_pred             hhHHHHH-hhhhhcCCcCCCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          245 KSLVMWS-SMKELVDPTLGDAYNT-EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       245 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ....++. .+.+...|.+++.+-. ..+..+.+.+..||+.||+.|.|+.=|.+++.
T Consensus       445 t~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~  501 (534)
T KOG3653|consen  445 TLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA  501 (534)
T ss_pred             CHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence            1111222 3344455555543322 35667999999999999999999988877664

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.89  E-value=5.4e-23  Score=194.11  Aligned_cols=199  Identities=17%  Similarity=0.214  Sum_probs=134.6

Q ss_pred             CCccCCcccccCceEEEEEEE-cC--CcEEEEEEecCCC-chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC-----C
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-ED--GQFVAIKRLTRGS-PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG-----G  166 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~--g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-----~  166 (363)
                      +|...+.||+|+||.||++.. .+  +..||||.+.... .......+.+|+.++.++ +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            477788999999999999985 34  7899999986432 222346788999999999 599999999865422     2


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------c------------CCCCc---------ee------
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------W------------LPDKW---------TH------  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------~------------~~~~~---------~~------  194 (363)
                      .++++||+. ++|.+++...                         .            +....         ..      
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~  159 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP  159 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence            678888886 5777665310                         0            00000         00      


Q ss_pred             ----EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh--------------
Q 048684          195 ----HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE--------------  255 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~--------------  255 (363)
                          .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+........+..              
T Consensus       160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (332)
T cd07857         160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS  239 (332)
T ss_pred             ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence                00122468899999998865 46899999999999999999999999764321111110000              


Q ss_pred             ------------hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          256 ------------LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       256 ------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                  .....+.. ..+.....+.+++.+||+.||.+|||+.+++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         240 PKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             hhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                        00000000 001123458899999999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.89  E-value=5.9e-23  Score=190.62  Aligned_cols=200  Identities=15%  Similarity=0.163  Sum_probs=127.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHH----------HHHHHHHHHHHhCCCCCcceEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMT----------TDYLSELGIIVHVDHPNIAKMIG  160 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~----------~~~~~E~~~l~~l~H~niv~l~~  160 (363)
                      .+.|.+.++||+|+||+||+|...+    +..+|+|........-..          .....+...+..++|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3679999999999999999998543    456777764322211000          11233444556678999999999


Q ss_pred             EEEcCC-----eEEEEEccCCCChhhhhh-------------------------hc------c------CCCC-------
Q 048684          161 YGVEGG-----MHLILELSPHGSLASLLY-------------------------AK------W------LPDK-------  191 (363)
Q Consensus       161 ~~~~~~-----~~lv~E~~~~gsL~~~l~-------------------------~~------~------~~~~-------  191 (363)
                      ++....     .+++++++.. ++.+.+.                         ..      .      +...       
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D  169 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID  169 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence            765433     3577777643 3322221                         00      0      0000       


Q ss_pred             --ceeE-------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH-HHH----
Q 048684          192 --WTHH-------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV-MWS----  251 (363)
Q Consensus       192 --~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~-~~~----  251 (363)
                        ....             ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+...... ...    
T Consensus       170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~  249 (294)
T PHA02882        170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCD  249 (294)
T ss_pred             cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHH
Confidence              0000             01123599999999999999999999999999999999999999986632111 111    


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+.....+...   .......+.+++..||..+|.+||++.++++.+
T Consensus       250 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        250 FIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            11111111110   111234588999999999999999999999865

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.89  E-value=3.6e-23  Score=184.56  Aligned_cols=187  Identities=20%  Similarity=0.337  Sum_probs=136.2

Q ss_pred             CceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChhhhhhh
Q 048684          108 GYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA  185 (363)
Q Consensus       108 ~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~~~l~~  185 (363)
                      +||.||+|... +|..||+|.+...........+.+|+..+++++|+||+++++++.... .++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            68999999964 589999999976544332578999999999999999999999887654 8899999999999887642


Q ss_pred             cc-------------------------------------CCCCceeE--------------EEeecccccCCCCchhhcc
Q 048684          186 KW-------------------------------------LPDKWTHH--------------IVSKIEGTFGYLPPEFFMH  214 (363)
Q Consensus       186 ~~-------------------------------------~~~~~~~~--------------~~~~~~gt~~y~aPE~~~~  214 (363)
                      ..                                     +.......              ......|+..|++||.+..
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~  160 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG  160 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHcc
Confidence            11                                     00000000              1123457889999999998


Q ss_pred             CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 048684          215 GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKV  294 (363)
Q Consensus       215 ~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev  294 (363)
                      ..++.++||||||+++|+|++|..||.......................  .......+.+++.+||..+|.+||++.++
T Consensus       161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  238 (244)
T smart00220      161 KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP--EWKISPEAKDLIRKLLVKDPEKRLTAEEA  238 (244)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccc--cccCCHHHHHHHHHHccCCchhccCHHHH
Confidence            8899999999999999999999999976322222222222211111100  00033459999999999999999999999


Q ss_pred             HH
Q 048684          295 VQ  296 (363)
Q Consensus       295 l~  296 (363)
                      ++
T Consensus       239 ~~  240 (244)
T smart00220      239 LQ  240 (244)
T ss_pred             hh
Confidence            86

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=1.4e-22  Score=207.75  Aligned_cols=88  Identities=20%  Similarity=0.337  Sum_probs=74.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||+||+|.. .+++.||||++....  .......+..|+.++..++||||+++++++.... .|+||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5788999999999999999985 468999999987432  2334567889999999999999999999776655 89999


Q ss_pred             EccCCCChhhhh
Q 048684          172 ELSPHGSLASLL  183 (363)
Q Consensus       172 E~~~~gsL~~~l  183 (363)
                      ||+.+|+|.+++
T Consensus        84 Ey~~g~~L~~li   95 (669)
T cd05610          84 EYLIGGDVKSLL   95 (669)
T ss_pred             eCCCCCCHHHHH
Confidence            999999998765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.88  E-value=1.8e-23  Score=184.76  Aligned_cols=199  Identities=16%  Similarity=0.158  Sum_probs=147.9

Q ss_pred             hcCCCccC-CcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC----
Q 048684           94 ATDNFSHE-NLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG----  166 (363)
Q Consensus        94 ~~~~f~~~-~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----  166 (363)
                      .+++|.+. ++||-|-.|.|-.+. ..+|+.+|+|++..      .....+|+++.-.. .|||||.+++++.+..    
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk  132 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRK  132 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence            45667654 579999999999998 56799999999863      24556899877666 5999999999765432    


Q ss_pred             -eEEEEEccCCCChhhhhhhcc---------------------------------CCC----------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKW---------------------------------LPD----------------------  190 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~---------------------------------~~~----------------------  190 (363)
                       +.+|||+|+||.|...+..+.                                 .++                      
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK  212 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence             668999999999988775110                                 000                      


Q ss_pred             -CceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH---HHHhhhhhcCCcCCCCCC
Q 048684          191 -KWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV---MWSSMKELVDPTLGDAYN  266 (363)
Q Consensus       191 -~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~  266 (363)
                       ......+..-|-||.|.|||++...+|+..+|+||+||++|-|++|.+||........   +...+... .-.++...+
T Consensus       213 ~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g-qy~FP~pEW  291 (400)
T KOG0604|consen  213 ETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG-QYEFPEPEW  291 (400)
T ss_pred             ccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc-CccCCChhH
Confidence             0111233445789999999999999999999999999999999999999987644221   11222211 123334455


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ...+....++|..+|..+|++|.|+.+++++-+
T Consensus       292 s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw  324 (400)
T KOG0604|consen  292 SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW  324 (400)
T ss_pred             hHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence            667788999999999999999999999997533

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.88  E-value=3.1e-23  Score=195.10  Aligned_cols=197  Identities=16%  Similarity=0.243  Sum_probs=146.9

Q ss_pred             CCcccccCceEEEEEE-EcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          101 ENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      .++||+|.||+||-|. .++|+.||||.+.+-.. ......+.+|+.||..++||.||.|...+...+ .++|||-+.|.
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            3789999999999998 57899999999976542 222367889999999999999999999888776 88999999764


Q ss_pred             Chhhhhhhc--------------------------------cCCCCc-----------------eeE------EEeeccc
Q 048684          178 SLASLLYAK--------------------------------WLPDKW-----------------THH------IVSKIEG  202 (363)
Q Consensus       178 sL~~~l~~~--------------------------------~~~~~~-----------------~~~------~~~~~~g  202 (363)
                      -|+-+|...                                ..++..                 ..+      .-..++|
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG  728 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG  728 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC
Confidence            444333210                                001000                 001      1234679


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      ||.|+|||++....|+..-|+||.|||+|--++|..||.....-....+...-+++|.    .+.+.....++||...|+
T Consensus       729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~----PW~eis~~AidlIn~LLq  804 (888)
T KOG4236|consen  729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPN----PWSEISPEAIDLINNLLQ  804 (888)
T ss_pred             CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCC----chhhcCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999986543222222222233333    345556669999999999


Q ss_pred             cCCCCCCCHHHHHHHhhcC
Q 048684          283 QTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L~~~  301 (363)
                      ..-.+|-|..+.+.+.+-.
T Consensus       805 Vkm~kRysvdk~lsh~Wlq  823 (888)
T KOG4236|consen  805 VKMRKRYSVDKSLSHPWLQ  823 (888)
T ss_pred             HHHHHhcchHhhccchhhh
Confidence            9999999999999865544

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.87  E-value=2e-22  Score=181.11  Aligned_cols=169  Identities=18%  Similarity=0.167  Sum_probs=119.6

Q ss_pred             cCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChhhhhh
Q 048684          107 GGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLY  184 (363)
Q Consensus       107 G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~~~l~  184 (363)
                      |.||.||++. ..+|+.||+|.+....      .+..|...+....||||+++++++.+.. .++||||+++|+|.+++.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence            8999999998 4678999999987532      2334555555667999999999877655 889999999999988763


Q ss_pred             hcc-C------------------------------------CCCceeE------------EEeecccccCCCCchhhccC
Q 048684          185 AKW-L------------------------------------PDKWTHH------------IVSKIEGTFGYLPPEFFMHG  215 (363)
Q Consensus       185 ~~~-~------------------------------------~~~~~~~------------~~~~~~gt~~y~aPE~~~~~  215 (363)
                      ... +                                    .......            ......++..|+|||++...
T Consensus        78 ~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~  157 (237)
T cd05576          78 KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGIS  157 (237)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCC
Confidence            110 0                                    0000000            00122356679999999888


Q ss_pred             CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 048684          216 IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQM  291 (363)
Q Consensus       216 ~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~  291 (363)
                      .++.++||||+||++|||++|+.|+.......      .......++..    ....+.+++.+||+.||.+||++
T Consensus       158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         158 EETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLNIPEW----VSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             CCCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccCCccc----CCHHHHHHHHHHccCCHHHhcCC
Confidence            89999999999999999999998876432111      00111112222    33458899999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.1e-22  Score=194.21  Aligned_cols=194  Identities=22%  Similarity=0.291  Sum_probs=144.1

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++.|.....+|.|+|+.|-.+. ..+++..+||++.+...     .-.+|+.++... +||||+++++.+.++. .|+|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v  394 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV  394 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeee
Confidence            36778888889999999999998 56789999999976522     223566666555 6999999999887765 8999


Q ss_pred             EEccCCCChhhhhhhc------------------------------cCC-------CCceeEE------------Eeecc
Q 048684          171 LELSPHGSLASLLYAK------------------------------WLP-------DKWTHHI------------VSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~------------------------------~~~-------~~~~~~~------------~~~~~  201 (363)
                      ||.+.+|-|.+.+...                              ..+       .....++            +..-|
T Consensus       395 ~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~  474 (612)
T KOG0603|consen  395 MELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPA  474 (612)
T ss_pred             ehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccc
Confidence            9999999776655311                              001       1110111            11225


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      -|..|.|||++....||+++||||||++||+||||+.||..........   ..+..+..    +...+....+|+.+||
T Consensus       475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~---~~i~~~~~----s~~vS~~AKdLl~~LL  547 (612)
T KOG0603|consen  475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH---TRIQMPKF----SECVSDEAKDLLQQLL  547 (612)
T ss_pred             hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH---HhhcCCcc----ccccCHHHHHHHHHhc
Confidence            6788999999999999999999999999999999999998766553322   22222322    2444556999999999


Q ss_pred             ccCCCCCCCHHHHHHHhh
Q 048684          282 NQTSACRPQMSKVVQALR  299 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~  299 (363)
                      +.||.+||+|.++..+-+
T Consensus       548 ~~dP~~Rl~~~~i~~h~w  565 (612)
T KOG0603|consen  548 QVDPALRLGADEIGAHPW  565 (612)
T ss_pred             cCChhhCcChhhhccCcc
Confidence            999999999999997644

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.85  E-value=2.7e-22  Score=182.61  Aligned_cols=201  Identities=19%  Similarity=0.287  Sum_probs=142.5

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC--CC----cceEEEEEEc-CC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--PN----IAKMIGYGVE-GG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~n----iv~l~~~~~~-~~  166 (363)
                      +++|.+..++|+|+||.|-.+. ...+..||||+++.-  ....+..+-|+++|.++.+  |+    +|++.+|+.- +.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            7899999999999999999997 455889999998743  3345667789999999942  22    6777776654 45


Q ss_pred             eEEEEEccCCCChhhhhhhc---------------------------------cCCC-----------------------
Q 048684          167 MHLILELSPHGSLASLLYAK---------------------------------WLPD-----------------------  190 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~---------------------------------~~~~-----------------------  190 (363)
                      .+||+|.+ |-|+.++|...                                 ..|+                       
T Consensus       166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence            89999988 34888887410                                 0000                       


Q ss_pred             ---------------CceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch--hhHHHHHhh
Q 048684          191 ---------------KWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ--KSLVMWSSM  253 (363)
Q Consensus       191 ---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~--~~~~~~~~~  253 (363)
                                     ...+..-+.++.|..|.|||++.+-.++.++||||+||||+|+.||..-|...+  ..+.+...+
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence                           000111234578999999999999999999999999999999999999887543  222222221


Q ss_pred             hhhcCCcCC--------------------------------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 048684          254 KELVDPTLG--------------------------------------DAYNTEQLTRLLLIASACINQTSACRPQMSKVV  295 (363)
Q Consensus       254 ~~~~~~~~~--------------------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl  295 (363)
                      .+.++..+.                                      ..........|.+|+..+|..||.+|+|+.|++
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            111110000                                      001123456799999999999999999999999


Q ss_pred             HHh
Q 048684          296 QAL  298 (363)
Q Consensus       296 ~~L  298 (363)
                      .+-
T Consensus       405 ~Hp  407 (415)
T KOG0671|consen  405 SHP  407 (415)
T ss_pred             cCH
Confidence            753

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.85  E-value=2.1e-22  Score=194.13  Aligned_cols=202  Identities=22%  Similarity=0.355  Sum_probs=150.7

Q ss_pred             HhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCeEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV-EGGMHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~lv  170 (363)
                      ...++|+....+|+|+||.||+++ ..+|...|||.++....+. ..-..+|+-+++..+|||||.++|.+. ...+++.
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            445789999999999999999998 6779999999998655443 466778999999999999999999554 5559999


Q ss_pred             EEccCCCChhhhhhh--------------------ccCC-CCcee-------------------------EE------Ee
Q 048684          171 LELSPHGSLASLLYA--------------------KWLP-DKWTH-------------------------HI------VS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~--------------------~~~~-~~~~~-------------------------~~------~~  198 (363)
                      ||||.+|+|.+.-+.                    .++. -...+                         ++      -.
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk  170 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK  170 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence            999999999886540                    0000 00000                         01      12


Q ss_pred             ecccccCCCCchhh---ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC-CcCCCCCCHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFF---MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRLL  274 (363)
Q Consensus       199 ~~~gt~~y~aPE~~---~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  274 (363)
                      .+.||+.|||||+.   ..+.|...+|||+.|+...|+..-.+|..........+-.-+..++ |.+.+  .......+-
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkD--k~kws~~fh  248 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKD--KTKWSEFFH  248 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccC--CccchHHHH
Confidence            34699999999988   4567999999999999999999988886654433332222233333 33332  334556688


Q ss_pred             HHHHHccccCCCCCCCHHHHHHH
Q 048684          275 LIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ++++.|+.++|.+||++..++.+
T Consensus       249 ~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheec
Confidence            99999999999999999998873

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=9.2e-23  Score=191.24  Aligned_cols=200  Identities=16%  Similarity=0.235  Sum_probs=151.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcC-CcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++..+..||-||||.|-++...+ ...+|+|++++..  .....+.+.+|-.||...+.|.||++|..+.+.. .|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            345566779999999999998654 3358999997654  2233567889999999999999999999666655 89999


Q ss_pred             EccCCCChhhhhhhccC-------------------------------CC-------Ccee-------------EEEeec
Q 048684          172 ELSPHGSLASLLYAKWL-------------------------------PD-------KWTH-------------HIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~-------------------------------~~-------~~~~-------------~~~~~~  200 (363)
                      |-|-||.|...|..+..                               |+       .+..             .-...+
T Consensus       500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTF  579 (732)
T KOG0614|consen  500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTF  579 (732)
T ss_pred             HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeee
Confidence            99999999887752211                               10       0000             113457


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      ||||.|.|||++.+...+.++|.|||||++|||+||.+||.+.+.......++++ +|.   -.++........+|+.+.
T Consensus       580 cGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-id~---i~~Pr~I~k~a~~Lik~L  655 (732)
T KOG0614|consen  580 CGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-IDK---IEFPRRITKTATDLIKKL  655 (732)
T ss_pred             cCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-hhh---hhcccccchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999987655444444333 332   124555666688999999


Q ss_pred             cccCCCCCCC-----HHHHHHHhh
Q 048684          281 INQTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       281 l~~dP~~RPt-----~~evl~~L~  299 (363)
                      +..+|.+|..     +.++-.+-+
T Consensus       656 Cr~~P~ERLG~~~~gI~DIkkH~W  679 (732)
T KOG0614|consen  656 CRDNPTERLGYQKGGINDIKKHRW  679 (732)
T ss_pred             HhcCcHhhhccccCChHHHHhhhh
Confidence            9999999976     667766544

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.84  E-value=1.1e-20  Score=185.80  Aligned_cols=202  Identities=19%  Similarity=0.281  Sum_probs=129.1

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-----------------cCCcEEEEEEecCCCchhHHHH--------------HHH
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-----------------EDGQFVAIKRLTRGSPEEMTTD--------------YLS  142 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-----------------~~g~~vAvK~~~~~~~~~~~~~--------------~~~  142 (363)
                      ..++|++.++||+|+||+||+|..                 ..++.||||.+...... ..+.              +..
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~-~~~~fl~e~~~~~~~~e~~~v  221 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQG-VRQDFLKTGTLAKGSAETGMV  221 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchh-hHHHHHhhhhhhhcccchhHH
Confidence            467999999999999999999963                 23567999998643321 1222              345


Q ss_pred             HHHHHHhCCCCCc-----ceEEEEEEc---------CCeEEEEEccCCCChhhhhhhccCC----------------C--
Q 048684          143 ELGIIVHVDHPNI-----AKMIGYGVE---------GGMHLILELSPHGSLASLLYAKWLP----------------D--  190 (363)
Q Consensus       143 E~~~l~~l~H~ni-----v~l~~~~~~---------~~~~lv~E~~~~gsL~~~l~~~~~~----------------~--  190 (363)
                      |+.++.+++|.++     +.+++||..         +..+|||||+++|+|.++++....+                .  
T Consensus       222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~  301 (507)
T PLN03224        222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM  301 (507)
T ss_pred             HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence            7777888876654     677777653         3478999999999998887531100                0  


Q ss_pred             ---------------------------Ccee----------------EEE--------------ee--cccccCCCCchh
Q 048684          191 ---------------------------KWTH----------------HIV--------------SK--IEGTFGYLPPEF  211 (363)
Q Consensus       191 ---------------------------~~~~----------------~~~--------------~~--~~gt~~y~aPE~  211 (363)
                                                 ...|                .+.              ..  ..+|+.|+|||.
T Consensus       302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~  381 (507)
T PLN03224        302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE  381 (507)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence                                       0000                000              00  113788999999


Q ss_pred             hccCC--------------------C--CccceEEechhHHHHHHhCCC-CCCCch----------hhHHHHHhhhhhcC
Q 048684          212 FMHGI--------------------A--DEKTDVYAYGVLLLEIITGRQ-ALDSSQ----------KSLVMWSSMKELVD  258 (363)
Q Consensus       212 ~~~~~--------------------~--~~~sDvwS~Gvvl~elltG~~-P~~~~~----------~~~~~~~~~~~~~~  258 (363)
                      +....                    |  ..+.||||+||++|+|++|.. ||....          .....|...... .
T Consensus       382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~-~  460 (507)
T PLN03224        382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ-K  460 (507)
T ss_pred             hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc-C
Confidence            85432                    1  235799999999999999975 665321          111222221111 1


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCC---CCCCCHHHHHHHhh
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTS---ACRPQMSKVVQALR  299 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~evl~~L~  299 (363)
                      ..+.  ..........+++.++|..+|   .+|+|+.|++++-+
T Consensus       461 ~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        461 YDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             CCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            1111  112234558899999999766   68999999998654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.1e-21  Score=188.09  Aligned_cols=149  Identities=21%  Similarity=0.390  Sum_probs=118.1

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .-|..++.||-|+||.|.++. .++...+|+|.|.+..  .......+..|-.||+.-+.+.||+||-.+.+.+ +|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            348888999999999999997 5667889999997543  1223567889999999999999999998666554 99999


Q ss_pred             EccCCCChhhhhhh-------------------------------ccCC---------------------CCceeE----
Q 048684          172 ELSPHGSLASLLYA-------------------------------KWLP---------------------DKWTHH----  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~-------------------------------~~~~---------------------~~~~~~----  195 (363)
                      +|++||++-.+|..                               ...+                     ..|+|.    
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            99999999877630                               0000                     011110    


Q ss_pred             --------------------------------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCC
Q 048684          196 --------------------------------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR  237 (363)
Q Consensus       196 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~  237 (363)
                                                            ....++||+.|+|||++....|+..+|+||.|||||||+.|+
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~  868 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ  868 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence                                                  122346999999999999999999999999999999999999


Q ss_pred             CCCCCch
Q 048684          238 QALDSSQ  244 (363)
Q Consensus       238 ~P~~~~~  244 (363)
                      +||....
T Consensus       869 ~pf~~~t  875 (1034)
T KOG0608|consen  869 PPFLADT  875 (1034)
T ss_pred             CCccCCC
Confidence            9997654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.84  E-value=6.8e-21  Score=157.26  Aligned_cols=200  Identities=19%  Similarity=0.264  Sum_probs=136.7

Q ss_pred             CCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...++||+|.||+||+|+ ..++..||+|.+..+. .++.....++||-+|+.++|.|||++++...... +.+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            46667889999999999998 6779999999997554 4455677899999999999999999999766544 8899999


Q ss_pred             cCCCChhhhhh--------------------------------hccCCCC---------------------ceeEEEeec
Q 048684          174 SPHGSLASLLY--------------------------------AKWLPDK---------------------WTHHIVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~--------------------------------~~~~~~~---------------------~~~~~~~~~  200 (363)
                      |.. +|..+..                                ....+..                     ...+-.+.-
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            964 4443321                                0000000                     000111223


Q ss_pred             ccccCCCCchhhccCC-CCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhh--------------hcCCcCCCC
Q 048684          201 EGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKE--------------LVDPTLGDA  264 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~--------------~~~~~~~~~  264 (363)
                      +-|++|.+|.++.+.+ |++..|+||.|||+.|+.. |++-|.+.+......+++..              ..|-..-..
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~  241 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI  241 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence            4689999999998765 8999999999999999997 56557666544333332211              111111111


Q ss_pred             CCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          265 YNT---------EQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       265 ~~~---------~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ++.         .....-.+++...+.-+|..|.++...+++
T Consensus       242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            111         122334677888888899999999888764

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.83  E-value=8.7e-22  Score=174.98  Aligned_cols=210  Identities=18%  Similarity=0.311  Sum_probs=142.3

Q ss_pred             CCCccCCcccccCceEEEEEEEcC-----CcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCe
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED-----GQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE--GGM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~  167 (363)
                      ..|+..+.||+|+||.||++...+     .+.+|||.++... ..+......+|+.+++.++|||||.|..++..  ...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            568889999999999999996322     2369999997543 22344677899999999999999999986655  348


Q ss_pred             EEEEEccCCCChhhhhhhc-------------------------cCCCCceeE---------------------------
Q 048684          168 HLILELSPHGSLASLLYAK-------------------------WLPDKWTHH---------------------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~-------------------------~~~~~~~~~---------------------------  195 (363)
                      ++++||.++ +|..+|+..                         ++...|..+                           
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999999997 787776510                         111111111                           


Q ss_pred             ------------EEeecccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhH--------HHHHhhh
Q 048684          196 ------------IVSKIEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSL--------VMWSSMK  254 (363)
Q Consensus       196 ------------~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~--------~~~~~~~  254 (363)
                                  -...++-|.+|.|||.+.+.. ||++.||||.|||+.||+|-.+-|.+.....        .....+.
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence                        012345789999999998864 9999999999999999999888776542211        0001111


Q ss_pred             hhc-CCcC---C------C-----------CCCH-----------HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          255 ELV-DPTL---G------D-----------AYNT-----------EQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       255 ~~~-~~~~---~------~-----------~~~~-----------~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      +.+ .|.-   +      .           .+..           .......+|+.++|..||.+|.|+.+.+++.-..+
T Consensus       263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence            110 0000   0      0           0000           01123678999999999999999999998765554


Q ss_pred             HHHH
Q 048684          303 EALA  306 (363)
Q Consensus       303 ~~~~  306 (363)
                      ..+|
T Consensus       343 d~lp  346 (438)
T KOG0666|consen  343 DPLP  346 (438)
T ss_pred             CCCC
Confidence            4333

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.4e-21  Score=170.87  Aligned_cols=195  Identities=17%  Similarity=0.271  Sum_probs=147.7

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCC-CchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCC
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG-SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGS  178 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gs  178 (363)
                      .-+|.....|..|+|++. |..+++|++.-. ......+.|..|.-.|+-+.||||+.++|.|..+. +.++..|||.|+
T Consensus       195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            345888899999999997 555667877532 23444578999999999999999999999998765 889999999999


Q ss_pred             hhhhhhhcc-----------------------------------------CCCCceeEE-------Eee---cccccCCC
Q 048684          179 LASLLYAKW-----------------------------------------LPDKWTHHI-------VSK---IEGTFGYL  207 (363)
Q Consensus       179 L~~~l~~~~-----------------------------------------~~~~~~~~~-------~~~---~~gt~~y~  207 (363)
                      |++.|+...                                         +.++.+.++       ..+   -...|.||
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawm  353 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWM  353 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccC
Confidence            999997210                                         011111111       111   23578899


Q ss_pred             CchhhccCCC---CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccC
Q 048684          208 PPEFFMHGIA---DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQT  284 (363)
Q Consensus       208 aPE~~~~~~~---~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  284 (363)
                      +||.+...+-   -.++|+|||.|+||||.|...||........-.+...+.+.+.++......    +..|+.-|++.|
T Consensus       354 spealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~h----m~klm~icmned  429 (448)
T KOG0195|consen  354 SPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRH----MNKLMNICMNED  429 (448)
T ss_pred             CHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHH----HHHHHHHHhcCC
Confidence            9999987653   368999999999999999999998776655555555666666665555554    889999999999


Q ss_pred             CCCCCCHHHHHHHhhc
Q 048684          285 SACRPQMSKVVQALRG  300 (363)
Q Consensus       285 P~~RPt~~evl~~L~~  300 (363)
                      |.+||.+..|+-.|+.
T Consensus       430 pgkrpkfdmivpilek  445 (448)
T KOG0195|consen  430 PGKRPKFDMIVPILEK  445 (448)
T ss_pred             CCcCCCcceehhhHHH
Confidence            9999999999877754

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.83  E-value=3.4e-21  Score=190.16  Aligned_cols=188  Identities=23%  Similarity=0.342  Sum_probs=136.0

Q ss_pred             CccCCcccccCce-EEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEcc
Q 048684           98 FSHENLIGQGGYA-EVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        98 f~~~~~lG~G~fg-~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      |...+++|.|.-| .||+|... |+.||||++-..    ...-..+||..|..-+ |||||++|+...+.. .||..|.|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            4555779999887 47999996 899999998642    2334568999999885 999999999887776 78999999


Q ss_pred             CCCChhhhhhhcc-----------------------------------CCC-----------------------------
Q 048684          175 PHGSLASLLYAKW-----------------------------------LPD-----------------------------  190 (363)
Q Consensus       175 ~~gsL~~~l~~~~-----------------------------------~~~-----------------------------  190 (363)
                      .. +|.+++....                                   .|.                             
T Consensus       586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence            85 8888875310                                   000                             


Q ss_pred             CceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhC-CCCCCCchhhHHHHHhhhhhcCC-cCCCCCCHH
Q 048684          191 KWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG-RQALDSSQKSLVMWSSMKELVDP-TLGDAYNTE  268 (363)
Q Consensus       191 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG-~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  268 (363)
                      ...........||.+|+|||++....-+.++||||+|||+|..++| ..||...-....  .++.+...- .+..  ..+
T Consensus       665 ~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~--~~d  740 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEP--LPD  740 (903)
T ss_pred             cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeecc--Cch
Confidence            0000112334599999999999999989999999999999999986 899986432211  122221110 1111  111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .  ...+||.+|++.+|..||++.+|+.+
T Consensus       741 ~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  741 C--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             H--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            1  58899999999999999999999964

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.82  E-value=5.1e-21  Score=161.24  Aligned_cols=169  Identities=23%  Similarity=0.325  Sum_probs=122.2

Q ss_pred             HhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEE-EEEcCCeEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIG-YGVEGGMHL  169 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~-~~~~~~~~l  169 (363)
                      ...++...+..||+|+||.|-+-+ ..+|...|+|.+...-..+..++.++|+.+..+. .+|.+|.||| ++.+++.+|
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            344556667789999999999998 5789999999998665566678899999977664 7999999999 666777999


Q ss_pred             EEEccCCCChhhhhh------------------------------------hccCCCCceeE------------------
Q 048684          170 ILELSPHGSLASLLY------------------------------------AKWLPDKWTHH------------------  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~------------------------------------~~~~~~~~~~~------------------  195 (363)
                      .||.|.- ||..+-.                                    ....|......                  
T Consensus       123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            9999964 6654432                                    00111110000                  


Q ss_pred             -EEee-cccccCCCCchhhcc----CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          196 -IVSK-IEGTFGYLPPEFFMH----GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       196 -~~~~-~~gt~~y~aPE~~~~----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                       ++.+ -+|.-.|||||.+..    ..|+-+|||||||+++.||.+++.||+...........+-+-..|.++
T Consensus       202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence             0111 247788999999853    379999999999999999999999998766555554444444444443

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.82  E-value=1.3e-20  Score=189.07  Aligned_cols=198  Identities=17%  Similarity=0.258  Sum_probs=119.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE-E------
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-ED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-Y------  161 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~------  161 (363)
                      ..++|+..+.||+|+||.||+|.. .+    +..||||.+.....   .+.+..+  .+....+.+++.++. +      
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~  204 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSS  204 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence            568899999999999999999985 45    78999998864321   1122222  122222333332222 1      


Q ss_pred             EEcCCeEEEEEccCCCChhhhhhhccC-----------------------------------------------------
Q 048684          162 GVEGGMHLILELSPHGSLASLLYAKWL-----------------------------------------------------  188 (363)
Q Consensus       162 ~~~~~~~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------------  188 (363)
                      ......++||||+.+|+|.+++.....                                                     
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~  284 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ  284 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence            122348999999999999776542110                                                     


Q ss_pred             ----CC-CceeE----------------EEeecccccCCCCchhhccC----------------------CCCccceEEe
Q 048684          189 ----PD-KWTHH----------------IVSKIEGTFGYLPPEFFMHG----------------------IADEKTDVYA  225 (363)
Q Consensus       189 ----~~-~~~~~----------------~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sDvwS  225 (363)
                          .. .....                .....+||+.|||||.+...                      .++.++||||
T Consensus       285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence                00 00000                01224578899999976432                      2345679999


Q ss_pred             chhHHHHHHhCCCCCCCchhhH-----------HHHHhhhhhcCCcCCCC----CC--HHHHHHHHHHHHHccccCCCCC
Q 048684          226 YGVLLLEIITGRQALDSSQKSL-----------VMWSSMKELVDPTLGDA----YN--TEQLTRLLLIASACINQTSACR  288 (363)
Q Consensus       226 ~Gvvl~elltG~~P~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~--~~~~~~l~~li~~cl~~dP~~R  288 (363)
                      |||+||||+++..|++......           ..|.   ....+.....    +.  ........+|+.+||+.||.+|
T Consensus       365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR  441 (566)
T PLN03225        365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWR---KLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR  441 (566)
T ss_pred             HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHH---HhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence            9999999999887765431111           1111   1111111000    00  0011235589999999999999


Q ss_pred             CCHHHHHHHhh
Q 048684          289 PQMSKVVQALR  299 (363)
Q Consensus       289 Pt~~evl~~L~  299 (363)
                      ||+.+++++-.
T Consensus       442 ~ta~e~L~Hpf  452 (566)
T PLN03225        442 ISAKAALAHPY  452 (566)
T ss_pred             CCHHHHhCCcC
Confidence            99999998633

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=5.9e-21  Score=171.23  Aligned_cols=190  Identities=19%  Similarity=0.277  Sum_probs=134.7

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEE-cCCeEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGV-EGGMHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~-~~~~~l  169 (363)
                      .++|..+.+||+|+|..|..++ ..+.+.+|+|++++..  .++...-...|-.+...- +||.+|-++.++. +..+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4689999999999999999998 4678999999987542  233344455676666655 7999999998655 455999


Q ss_pred             EEEccCCCChhhhhhhc-cCCCC-----------------------------------c----------------eeEEE
Q 048684          170 ILELSPHGSLASLLYAK-WLPDK-----------------------------------W----------------THHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~-~~~~~-----------------------------------~----------------~~~~~  197 (363)
                      |.||++||+|--++... .+|+.                                   .                .-...
T Consensus       329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~t  408 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT  408 (593)
T ss_pred             EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCccc
Confidence            99999999996554310 00000                                   0                00124


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch-------hhHHHHHh-hhhhcCCcCCCCCCHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-------KSLVMWSS-MKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~  269 (363)
                      +.+||||.|+|||++.+..|+..+|+|++||+++||+.|+.||+--.       .....++. +...+  .++.    ..
T Consensus       409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--ripr----sl  482 (593)
T KOG0695|consen  409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPR----SL  482 (593)
T ss_pred             ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccc----ee
Confidence            56799999999999999999999999999999999999999997321       11112222 22211  1222    22


Q ss_pred             HHHHHHHHHHccccCCCCCCC
Q 048684          270 LTRLLLIASACINQTSACRPQ  290 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt  290 (363)
                      +.....++..-|++||.+|..
T Consensus       483 svkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  483 SVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             ehhhHHHHHHhhcCCcHHhcC
Confidence            333667888889999999854

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=3.9e-22  Score=172.53  Aligned_cols=210  Identities=18%  Similarity=0.262  Sum_probs=142.6

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecC-CCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---------  164 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------  164 (363)
                      +.|+...+||+|.||.||+++ ..+|+.||+|++-. +..++.....++|+.+|..++|+|++.++..|..         
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            467777899999999999998 45688899987642 2334455677899999999999999999886642         


Q ss_pred             CCeEEEEEccCCCChhhhhhhc---------------------------c-----------CCCCceeE-----------
Q 048684          165 GGMHLILELSPHGSLASLLYAK---------------------------W-----------LPDKWTHH-----------  195 (363)
Q Consensus       165 ~~~~lv~E~~~~gsL~~~l~~~---------------------------~-----------~~~~~~~~-----------  195 (363)
                      ..+|+|+.+|++ +|..+|...                           .           +..+.+..           
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence            127999999987 666655311                           0           00000000           


Q ss_pred             --------EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHH--HhhhhhcCCc----
Q 048684          196 --------IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW--SSMKELVDPT----  260 (363)
Q Consensus       196 --------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~--~~~~~~~~~~----  260 (363)
                              ..+.-+-|++|.+||.+.+. .|+++.|||..|||+.||+||.+-+.+........  ..+.+...+.    
T Consensus       176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~  255 (376)
T KOG0669|consen  176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN  255 (376)
T ss_pred             cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence                    01112348999999999876 59999999999999999999999988764322111  1111111111    


Q ss_pred             --------------CC-CCCC--HHH------HHHHHHHHHHccccCCCCCCCHHHHHHHhhcChHHHH
Q 048684          261 --------------LG-DAYN--TEQ------LTRLLLIASACINQTSACRPQMSKVVQALRGDEEALA  306 (363)
Q Consensus       261 --------------~~-~~~~--~~~------~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~  306 (363)
                                    ++ ..+.  ++.      .....+|+..++..||.+|+++.+++++-....+..|
T Consensus       256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence                          11 0000  011      1257789999999999999999999987665544444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.79  E-value=3.8e-19  Score=154.47  Aligned_cols=158  Identities=28%  Similarity=0.511  Sum_probs=125.8

Q ss_pred             ccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChhh
Q 048684          104 IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLAS  181 (363)
Q Consensus       104 lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~~  181 (363)
                      ||+|++|.||++... +|..+++|.+...........+.+|+..+..+.|++|+++++++.... .++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            699999999999964 489999999986554323568999999999999999999999887755 889999999999988


Q ss_pred             hhhhc--c------------------------------------CCC-CceeEE---------------EeecccccCCC
Q 048684          182 LLYAK--W------------------------------------LPD-KWTHHI---------------VSKIEGTFGYL  207 (363)
Q Consensus       182 ~l~~~--~------------------------------------~~~-~~~~~~---------------~~~~~gt~~y~  207 (363)
                      ++...  .                                    +.. .....+               .....+...|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYM  160 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCcc
Confidence            87421  0                                    000 000000               11133677899


Q ss_pred             CchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCC
Q 048684          208 PPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSA  286 (363)
Q Consensus       208 aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  286 (363)
                      +||.+... .++.++|+|++|+++++|                                     ..+.+++..|++.+|.
T Consensus       161 ~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~p~  203 (215)
T cd00180         161 APEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKDPE  203 (215)
T ss_pred             ChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCCcc
Confidence            99999887 889999999999999999                                     4488999999999999


Q ss_pred             CCCCHHHHHHHh
Q 048684          287 CRPQMSKVVQAL  298 (363)
Q Consensus       287 ~RPt~~evl~~L  298 (363)
                      .||++.++++.+
T Consensus       204 ~R~~~~~l~~~~  215 (215)
T cd00180         204 KRPSAKEILEHL  215 (215)
T ss_pred             cCcCHHHHhhCC
Confidence            999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.78  E-value=2.1e-18  Score=152.42  Aligned_cols=145  Identities=26%  Similarity=0.456  Sum_probs=114.1

Q ss_pred             CccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccC
Q 048684           98 FSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      |...+.||.|++|+||++... ++..+|+|.+...........+.+|+..+..++|+|++++++++.... .++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            456688999999999999965 489999999986554324678999999999999999999999877655 889999999


Q ss_pred             CCChhhhhhhccC--C------------------------------------CCce---------eE-------EEeecc
Q 048684          176 HGSLASLLYAKWL--P------------------------------------DKWT---------HH-------IVSKIE  201 (363)
Q Consensus       176 ~gsL~~~l~~~~~--~------------------------------------~~~~---------~~-------~~~~~~  201 (363)
                      +++|.+++.....  .                                    ....         ..       ......
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVK  160 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccccee
Confidence            9999887642110  0                                    0000         00       012345


Q ss_pred             cccCCCCchhh-ccCCCCccceEEechhHHHHHHhCCCCCCC
Q 048684          202 GTFGYLPPEFF-MHGIADEKTDVYAYGVLLLEIITGRQALDS  242 (363)
Q Consensus       202 gt~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~elltG~~P~~~  242 (363)
                      ++..|++||.+ ....++.++||||||+++++|++|+.||..
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            77789999999 666788899999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=6.5e-19  Score=164.97  Aligned_cols=102  Identities=17%  Similarity=0.370  Sum_probs=75.0

Q ss_pred             hcCCCCcccCHHHHHHhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-----
Q 048684           78 YLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-----  151 (363)
Q Consensus        78 ~~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----  151 (363)
                      +.+.+...+...+. ...++|.+.++||.|.|+|||++. ..+.+.||+|+.+..  +...+..+.||.+|.+++     
T Consensus        61 Y~kGGYHpV~IGD~-F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~  137 (590)
T KOG1290|consen   61 YRKGGYHPVRIGDV-FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPN  137 (590)
T ss_pred             hhcCCCceeecccc-ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCC
Confidence            44555544444442 234789999999999999999997 566889999998743  345677889999999883     


Q ss_pred             C---CCcceEEEEEEcCC-----eEEEEEccCCCChhhhh
Q 048684          152 H---PNIAKMIGYGVEGG-----MHLILELSPHGSLASLL  183 (363)
Q Consensus       152 H---~niv~l~~~~~~~~-----~~lv~E~~~~gsL~~~l  183 (363)
                      |   .+||+|++++...+     +++|+|++- -+|..+|
T Consensus       138 ~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLG-dnLLklI  176 (590)
T KOG1290|consen  138 DPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLG-DNLLKLI  176 (590)
T ss_pred             CCCCceeeeeeccceecCCCCcEEEEEehhhh-hHHHHHH
Confidence            3   46999999776432     789999884 3555554

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.73  E-value=4.3e-18  Score=145.57  Aligned_cols=101  Identities=13%  Similarity=0.152  Sum_probs=73.7

Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-CCC-CCCHHHHH--HHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-LGD-AYNTEQLT--RLLLI  276 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~--~l~~l  276 (363)
                      .||+.|||||++.+..++.++|||||||++|||+||+.||............+.....+. ... ........  .+.++
T Consensus        65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (176)
T smart00750       65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF  144 (176)
T ss_pred             CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence            589999999999999999999999999999999999999976533222222221111111 111 11222233  58999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhhcC
Q 048684          277 ASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..||+.+|..||++.+++.++...
T Consensus       145 i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      145 MRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHhcccccccCHHHHHHHHHHH
Confidence            9999999999999999999987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.72  E-value=1e-17  Score=154.72  Aligned_cols=208  Identities=20%  Similarity=0.305  Sum_probs=144.3

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEE-c---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEc
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQL-E---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVE  164 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~  164 (363)
                      .+....+.|...++||.|+|++||++.. .   ....||+|.+.....   .....+|+++|..+. |.||+++.++...
T Consensus        30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~---p~ri~~El~~L~~~gG~~ni~~~~~~~rn  106 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS---PSRILNELEMLYRLGGSDNIIKLNGCFRN  106 (418)
T ss_pred             hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC---chHHHHHHHHHHHhccchhhhcchhhhcc
Confidence            3455567899999999999999999973 3   467899999976553   346889999999995 9999999998776


Q ss_pred             CC-eEEEEEccCCCChhhhhhh----------------------------------------------------------
Q 048684          165 GG-MHLILELSPHGSLASLLYA----------------------------------------------------------  185 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~----------------------------------------------------------  185 (363)
                      ++ ..+|+||+++.+..+++..                                                          
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~  186 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY  186 (418)
T ss_pred             CCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence            66 8899999998776555420                                                          


Q ss_pred             ------cc-----CCC------------------C-------ceeEEEeecccccCCCCchhhccC-CCCccceEEechh
Q 048684          186 ------KW-----LPD------------------K-------WTHHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGV  228 (363)
Q Consensus       186 ------~~-----~~~------------------~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gv  228 (363)
                            ..     ...                  .       .....-...+||++|.|||++..- ..++++||||.||
T Consensus       187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GV  266 (418)
T KOG1167|consen  187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGV  266 (418)
T ss_pred             hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccc
Confidence                  00     000                  0       000001123599999999999654 5789999999999


Q ss_pred             HHHHHHhCCCCCCCchhhHH-------------------------HHH---------------hh-hhhcCC-----cCC
Q 048684          229 LLLEIITGRQALDSSQKSLV-------------------------MWS---------------SM-KELVDP-----TLG  262 (363)
Q Consensus       229 vl~elltG~~P~~~~~~~~~-------------------------~~~---------------~~-~~~~~~-----~~~  262 (363)
                      |++-+++++.||.....+..                         .|.               .+ .+...+     ...
T Consensus       267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~  346 (418)
T KOG1167|consen  267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER  346 (418)
T ss_pred             eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence            99999999999864321110                         111               00 000000     000


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.......+.+++.+|+..||.+|.|+++.|.+--.
T Consensus       347 ~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF  384 (418)
T KOG1167|consen  347 EIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFF  384 (418)
T ss_pred             ccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCC
Confidence            01111233468999999999999999999999986543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.71  E-value=2.8e-18  Score=146.90  Aligned_cols=200  Identities=18%  Similarity=0.259  Sum_probs=138.3

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC---eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG---MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~---~~l  169 (363)
                      .++|++.+++|+|.|+.||.|. ..++..++||.++.-    ..+.+.+|+.||..|. |||||+|++...++.   ..|
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            4689999999999999999998 677889999999753    2567899999999997 999999999887765   679


Q ss_pred             EEEccCCCChhhhhh----------------------hc-cCCCCc-eeE------------EE-------------eec
Q 048684          170 ILELSPHGSLASLLY----------------------AK-WLPDKW-THH------------IV-------------SKI  200 (363)
Q Consensus       170 v~E~~~~gsL~~~l~----------------------~~-~~~~~~-~~~------------~~-------------~~~  200 (363)
                      |+||+.+.+...+..                      +. .+..+. .+.            +-             .--
T Consensus       113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVR  192 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR  192 (338)
T ss_pred             HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeee
Confidence            999999876543221                      00 000000 000            00             011


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchh---hHHHHH-------------hhhhhcCCcCCC
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQK---SLVMWS-------------SMKELVDPTLGD  263 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---~~~~~~-------------~~~~~~~~~~~~  263 (363)
                      +.+..|.-||.+..- .|+..-|+|||||+|..|+..+.||.....   .++.-.             ...-.++|.+.+
T Consensus       193 VASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~  272 (338)
T KOG0668|consen  193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFED  272 (338)
T ss_pred             eehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhh
Confidence            345668899999764 589999999999999999999999864321   111111             000012222211


Q ss_pred             C---------------CCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          264 A---------------YNTE-QLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       264 ~---------------~~~~-~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .               .... ...+.++++...|..|-.+|||+.|.+.+-
T Consensus       273 i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp  323 (338)
T KOG0668|consen  273 ILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP  323 (338)
T ss_pred             HhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence            0               0001 225688999999999999999999998753

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.69  E-value=1.2e-17  Score=157.48  Aligned_cols=200  Identities=19%  Similarity=0.254  Sum_probs=138.0

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC------CCCcceEEE-EEEcCC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD------HPNIAKMIG-YGVEGG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~-~~~~~~  166 (363)
                      -+.|.+....|+|-|++|..|.. ..|..||||++..+.  -..+.=+.|++||.+|+      --|+++|+. |...++
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            36788888899999999999984 458899999997543  22355678999999994      458888887 455566


Q ss_pred             eEEEEEccCCCChhhhhh----------------------------------hccCCCCceeE---EEeecc--------
Q 048684          167 MHLILELSPHGSLASLLY----------------------------------AKWLPDKWTHH---IVSKIE--------  201 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~----------------------------------~~~~~~~~~~~---~~~~~~--------  201 (363)
                      +|||+|-+.- +|.++|.                                  +...|+.....   .+..+|        
T Consensus       509 LClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  509 LCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             eEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence            9999998753 6766664                                  11111111110   001111        


Q ss_pred             ---------cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH--HHh------------------
Q 048684          202 ---------GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM--WSS------------------  252 (363)
Q Consensus       202 ---------gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~--~~~------------------  252 (363)
                               -+..|.|||++.+.+|+...|+||.||+||||.||+.-|.+.......  ...                  
T Consensus       588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dq  667 (752)
T KOG0670|consen  588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQ  667 (752)
T ss_pred             ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhh
Confidence                     233499999999999999999999999999999999988775432111  100                  


Q ss_pred             -----------------------hhhhcCC------------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          253 -----------------------MKELVDP------------TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       253 -----------------------~~~~~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                             +...+.|            .++. ........|.+|+..|+..||.+|.|..+.|.+
T Consensus       668 HFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~d-eq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  668 HFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPD-EQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             hcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCc-hhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence                                   0000111            1111 123456778999999999999999999999875


Q ss_pred             h
Q 048684          298 L  298 (363)
Q Consensus       298 L  298 (363)
                      -
T Consensus       747 p  747 (752)
T KOG0670|consen  747 P  747 (752)
T ss_pred             C
Confidence            3

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.66  E-value=1.2e-17  Score=159.39  Aligned_cols=146  Identities=22%  Similarity=0.296  Sum_probs=110.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-------hhHHHHHHHHHHHHHhCC---CCCcceEEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-------EEMTTDYLSELGIIVHVD---HPNIAKMIGYGVE  164 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~  164 (363)
                      .+|...+.+|.|+||.|+.+.+ .+...|+||.+.+...       +...-....||.||+.++   |+||+++++|+.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4588899999999999999985 4467899999865431       112234668999999997   9999999999998


Q ss_pred             CC-eEEEEEcc-CCCChhhhhhhcc--------------------CC-CCceeE--------------------------
Q 048684          165 GG-MHLILELS-PHGSLASLLYAKW--------------------LP-DKWTHH--------------------------  195 (363)
Q Consensus       165 ~~-~~lv~E~~-~~gsL~~~l~~~~--------------------~~-~~~~~~--------------------------  195 (363)
                      ++ +||+||-- ++-+|.++|..+.                    +. ....|+                          
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence            87 67888754 5568888885210                    00 011110                          


Q ss_pred             ---EEeecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCC
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALD  241 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~  241 (363)
                         ....++||..|.|||++.+.+| +..-|||++||+||-++....||.
T Consensus       721 ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  721 KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence               0112469999999999998887 677899999999999999998885

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.62  E-value=3e-16  Score=140.41  Aligned_cols=199  Identities=20%  Similarity=0.241  Sum_probs=137.3

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------C
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------G  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------~  166 (363)
                      .+|.....+|.|.- .|-.+. .-.+++||+|.+...- .....++..+|..++..+.|+|||+++.++...       +
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            46777788999988 555554 3458999999885332 122346778999999999999999999977643       3


Q ss_pred             eEEEEEccCCCChhhhhhh-----------------------------ccCCCC--------------------ceeEEE
Q 048684          167 MHLILELSPHGSLASLLYA-----------------------------KWLPDK--------------------WTHHIV  197 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~-----------------------------~~~~~~--------------------~~~~~~  197 (363)
                      .|+|||||.. +|...++.                             ...|..                    ......
T Consensus        96 ~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~m  174 (369)
T KOG0665|consen   96 VYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMM  174 (369)
T ss_pred             HHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCccccc
Confidence            6899999975 77666531                             011111                    011133


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-------------------------
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-------------------------  252 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-------------------------  252 (363)
                      +..+.|..|.|||++.+..|.+.+||||.||++.||++|..-|.+.+. ...|..                         
T Consensus       175 tpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~-idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~  253 (369)
T KOG0665|consen  175 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH-IDQWNKIIEQLGTPDPSFMKQLQPTVRNYVE  253 (369)
T ss_pred             CchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH-HHHHHHHHHHhcCCCHHHHHHhhHHHHHHhh
Confidence            445678889999999999999999999999999999999988876432 111110                         


Q ss_pred             ---------hhhhc-CCcCC--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          253 ---------MKELV-DPTLG--DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       253 ---------~~~~~-~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                               ..+.+ |..+.  ...++-....+.+++.+||..||++|.++.++|++
T Consensus       254 ~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  254 NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                     00000 10000  01112234568899999999999999999999985

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.61  E-value=1.2e-16  Score=140.03  Aligned_cols=198  Identities=17%  Similarity=0.314  Sum_probs=134.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEE-EEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGY-GVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~-~~lv~  171 (363)
                      +.|.+.+.||+|-||.+-++.+ .+.+.+++|.+....  ...+.|.+|..---.| .|.|||.-|+. +...+ +.+++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            5688889999999999999995 557789999987543  2367899998755555 49999998873 33333 66889


Q ss_pred             EccCCCChhhhhhhccCCCC--------------------ceeE----------------E--------------Eeecc
Q 048684          172 ELSPHGSLASLLYAKWLPDK--------------------WTHH----------------I--------------VSKIE  201 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~~~--------------------~~~~----------------~--------------~~~~~  201 (363)
                      ||+|.|+|.+-+....+.+.                    ..|+                +              +..+-
T Consensus       102 E~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~  181 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLE  181 (378)
T ss_pred             ccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhh
Confidence            99999999876642111110                    0000                0              00111


Q ss_pred             cccCCCCchhhccC-----CCCccceEEechhHHHHHHhCCCCCCCch---hhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          202 GTFGYLPPEFFMHG-----IADEKTDVYAYGVLLLEIITGRQALDSSQ---KSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       202 gt~~y~aPE~~~~~-----~~~~~sDvwS~Gvvl~elltG~~P~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      .+..|-+||.+...     ...+.+|||.|||++|.++||++||....   ..-..|........+.++..+.. .+..+
T Consensus       182 ~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~-fs~~a  260 (378)
T KOG1345|consen  182 YVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNP-FSEKA  260 (378)
T ss_pred             hhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcc-cCHHH
Confidence            34568899987432     34789999999999999999999998432   33344555555555555544332 34447


Q ss_pred             HHHHHHccccCCCCCCCHHHHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      ..+..+-+..+|.+|--..++-+
T Consensus       261 ~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  261 LRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             HHHHHHhcCCcccccchhHHHHH
Confidence            77888899999999954444433

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=1.1e-16  Score=140.42  Aligned_cols=202  Identities=14%  Similarity=0.216  Sum_probs=133.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~  168 (363)
                      +.+..+.||-|+||.||.++. .+|+.||+|++..-- .-...+.+.+|+.+|..++|.|++..++.....+      +|
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            456678899999999999984 679999999885321 1123578999999999999999999988765543      46


Q ss_pred             EEEEccCCCChhhhhhh-------------------------------ccCCCC------ceeE----------------
Q 048684          169 LILELSPHGSLASLLYA-------------------------------KWLPDK------WTHH----------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~-------------------------------~~~~~~------~~~~----------------  195 (363)
                      +++|.|.. +|..+|-+                               ...+..      ....                
T Consensus       134 V~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~  212 (449)
T KOG0664|consen  134 VLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL  212 (449)
T ss_pred             HHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence            67777754 56554421                               000100      0000                


Q ss_pred             EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHH--------------H---------
Q 048684          196 IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW--------------S---------  251 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~--------------~---------  251 (363)
                      .+++-+-|-.|.|||++.+. .|+.+.||||.|||+.||+..+.-|...+.-....              +         
T Consensus       213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H  292 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH  292 (449)
T ss_pred             hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence            11223467789999999876 59999999999999999998887776543211110              0         


Q ss_pred             hhhh-hcCCcCCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          252 SMKE-LVDPTLGDAY----NTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       252 ~~~~-~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+.. ...|.+..-+    +...-.+...+...++..||..|.+..+.+.++.
T Consensus       293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            0111 1112221111    1122234667778889999999999998887654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.47  E-value=1.7e-14  Score=151.40  Aligned_cols=91  Identities=21%  Similarity=0.297  Sum_probs=66.4

Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +||+.|||||++.+..|+.++|||||||+||||++|.+|+........  .......++...     ........++.+|
T Consensus       176 ~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~  248 (793)
T PLN00181        176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMS--SLRHRVLPPQIL-----LNWPKEASFCLWL  248 (793)
T ss_pred             CCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHH--HHHHhhcChhhh-----hcCHHHHHHHHHh
Confidence            478889999999999999999999999999999999998764322111  111111221111     1123356788899


Q ss_pred             cccCCCCCCCHHHHHHHh
Q 048684          281 INQTSACRPQMSKVVQAL  298 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L  298 (363)
                      |+.+|..||++.+++++-
T Consensus       249 L~~~P~~Rps~~eil~h~  266 (793)
T PLN00181        249 LHPEPSCRPSMSELLQSE  266 (793)
T ss_pred             CCCChhhCcChHHHhhch
Confidence            999999999999998753

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.42  E-value=3.8e-12  Score=117.25  Aligned_cols=198  Identities=23%  Similarity=0.375  Sum_probs=142.6

Q ss_pred             CccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchh--HHHHHHHHHHHHHhCCCC-CcceEEEEEEcCC-eEEEEEc
Q 048684           98 FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE--MTTDYLSELGIIVHVDHP-NIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~-~~lv~E~  173 (363)
                      |.....||.|+||.||++...  ..+|+|.+.......  ....|.+|+.++..+.|+ +|+++++++.... .+++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566778999999999999976  778999987554332  467899999999999988 7999999886665 6899999


Q ss_pred             cCCCChhhhhhhcc----C------------------------------------CCCc--ee-----------------
Q 048684          174 SPHGSLASLLYAKW----L------------------------------------PDKW--TH-----------------  194 (363)
Q Consensus       174 ~~~gsL~~~l~~~~----~------------------------------------~~~~--~~-----------------  194 (363)
                      +.+++|.+++....    +                                    ....  ..                 
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  159 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS  159 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence            99999885443110    0                                    0000  00                 


Q ss_pred             ---EEEeecccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchh---hHHHHHhhhhhcCC----cC
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQK---SLVMWSSMKELVDP----TL  261 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---~~~~~~~~~~~~~~----~~  261 (363)
                         .......||..|++||.+.+   ..++...|+||+|++++++++|..||.....   ....+..+.....+    ..
T Consensus       160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (384)
T COG0515         160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL  239 (384)
T ss_pred             cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccccc
Confidence               01245578999999999987   6789999999999999999999999876553   22333333332222    11


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...........+.+++..|+..+|..|.++.+....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             CccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            111111122458889999999999999999887764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.37  E-value=1.2e-12  Score=126.67  Aligned_cols=153  Identities=23%  Similarity=0.422  Sum_probs=101.9

Q ss_pred             HHhCCCCCcceEEEEEEcCC-eEEEEEccCCCChhhhhhhccCCCC----------------------------------
Q 048684          147 IVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDK----------------------------------  191 (363)
Q Consensus       147 l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~~~----------------------------------  191 (363)
                      |+.+.|.|+.+|+|.+.++. .++|.+||..|+|.|.+....+..+                                  
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            35689999999999988877 6778899999999999863211111                                  


Q ss_pred             -----ceeEEEe----ec-------------ccccCCCCchhhccCC-------CCccceEEechhHHHHHHhCCCCCCC
Q 048684          192 -----WTHHIVS----KI-------------EGTFGYLPPEFFMHGI-------ADEKTDVYAYGVLLLEIITGRQALDS  242 (363)
Q Consensus       192 -----~~~~~~~----~~-------------~gt~~y~aPE~~~~~~-------~~~~sDvwS~Gvvl~elltG~~P~~~  242 (363)
                           |...+..    .+             .-..-|.|||.+....       .+.++||||||++++|+++...||+.
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence                 1110000    00             0123489999997641       47789999999999999999999986


Q ss_pred             chhhH----HHHHhhhh-hcCCcCCCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          243 SQKSL----VMWSSMKE-LVDPTLGDAYNT-EQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       243 ~~~~~----~~~~~~~~-~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....    .... +.. ...+.-+..... +....+..++..||..+|..||++.+|-..+..
T Consensus       161 ~~~~~~~~eii~~-~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  161 RNLVEDPDEIILR-VKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             ccccCChHHHHHH-HHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            43211    1111 222 111111111211 334469999999999999999999999876653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=5.7e-14  Score=141.32  Aligned_cols=198  Identities=20%  Similarity=0.220  Sum_probs=128.9

Q ss_pred             ccCCcccccCceEEEEEE-EcCCcEEEEEEec----CCCch-hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           99 SHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLT----RGSPE-EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~----~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ....++|.|.+|.|+... ......++.|...    ....+ .....+..|+.+-..+.|||++..+....+.. ..-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            355789999999888876 3334445555433    22222 12223667888888899999987766444433 33449


Q ss_pred             EccCCCChhhhhhhc-c-------------------------------------------------------CCCCceeE
Q 048684          172 ELSPHGSLASLLYAK-W-------------------------------------------------------LPDKWTHH  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-~-------------------------------------------------------~~~~~~~~  195 (363)
                      |||++ +|..++... .                                                       .+......
T Consensus       401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence            99999 998877421 0                                                       00011112


Q ss_pred             EEeecccccCCCCchhhccCCCCc-cceEEechhHHHHHHhCCCCCCCchhhHHHH--Hhhh-hhcCCcCCCCCCHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADE-KTDVYAYGVLLLEIITGRQALDSSQKSLVMW--SSMK-ELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~  271 (363)
                      ....++|+-.|+|||++.+..|++ ..||||.||++..|.+|+.||.........+  .... ......-..........
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~  559 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPR  559 (601)
T ss_pred             hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchh
Confidence            334567999999999999999875 5899999999999999999997654332221  1000 00000000111223455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ....++.++|+.||.+|.|+.+|++.
T Consensus       560 ~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  560 ETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             hHHHHHHHHccCChhheecHHHHhhC
Confidence            68889999999999999999999974

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.34  E-value=2.4e-13  Score=131.90  Aligned_cols=177  Identities=23%  Similarity=0.296  Sum_probs=125.5

Q ss_pred             cccccCceEEEEEE----EcCCcEEEEEEecCCCch-hHHHHHHHHHHHHHhCC-CCCcceEEEEEE-cCCeEEEEEccC
Q 048684          103 LIGQGGYAEVYKGQ----LEDGQFVAIKRLTRGSPE-EMTTDYLSELGIIVHVD-HPNIAKMIGYGV-EGGMHLILELSP  175 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~----~~~g~~vAvK~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~-~~~~~lv~E~~~  175 (363)
                      ++|.|.||.|+.+.    ...|..+|+|.+.+.... ........|..++..++ ||.+|+++..+. +...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            47999999999874    234788999998755421 11225667888899887 999999987554 455999999999


Q ss_pred             CCChhhhhhhc-------------------------------cCCCCcee----EE-------------EeecccccCCC
Q 048684          176 HGSLASLLYAK-------------------------------WLPDKWTH----HI-------------VSKIEGTFGYL  207 (363)
Q Consensus       176 ~gsL~~~l~~~-------------------------------~~~~~~~~----~~-------------~~~~~gt~~y~  207 (363)
                      +|.|...+...                               ........    ++             ...-|||..||
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym  160 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR  160 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence            99987766410                               00000000    00             01128999999


Q ss_pred             CchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC
Q 048684          208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSAC  287 (363)
Q Consensus       208 aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  287 (363)
                      |||++.  ....++|+||||++++||+||..||...    ....+...      ....+.+....+..++..++..+|.+
T Consensus       161 ApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~----~~~~Il~~------~~~~p~~l~~~a~~~~~~l~~r~p~n  228 (612)
T KOG0603|consen  161 APEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD----TMKRILKA------ELEMPRELSAEARSLFRQLFKRNPEN  228 (612)
T ss_pred             hhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH----HHHHHhhh------ccCCchhhhHHHHHHHHHHHhhCHHH
Confidence            999998  6789999999999999999999999871    11112111      11245666667888899999999999


Q ss_pred             CCCH
Q 048684          288 RPQM  291 (363)
Q Consensus       288 RPt~  291 (363)
                      |.-.
T Consensus       229 rLg~  232 (612)
T KOG0603|consen  229 RLGA  232 (612)
T ss_pred             Hhcc
Confidence            9665

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.29  E-value=8.5e-13  Score=125.85  Aligned_cols=72  Identities=25%  Similarity=0.432  Sum_probs=60.0

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG  162 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~  162 (363)
                      +.+..++|+....+|.||||+|+.+.. .++..+|||+|.....+....+.++|+..++++.|++++++...+
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~  116 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAW  116 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheece
Confidence            445568899999999999999999984 446689999998766666677889999999999999999987643

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.22  E-value=8.2e-13  Score=134.84  Aligned_cols=189  Identities=18%  Similarity=0.282  Sum_probs=125.0

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHH--HHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGI--IVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +|...+.||++.|=.|.+|+.+.|. |+||++-+..+.-..+.|.++++-  ...++|||++.+.-+..... .|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5677788999999999999988787 889998654433224445444433  45568999999877654443 5677788


Q ss_pred             cCCCChhhhhhhc--------------------------------------------------------cCCCCceeE--
Q 048684          174 SPHGSLASLLYAK--------------------------------------------------------WLPDKWTHH--  195 (363)
Q Consensus       174 ~~~gsL~~~l~~~--------------------------------------------------------~~~~~~~~~--  195 (363)
                      ..+ +|+|.|..+                                                        ++|++....  
T Consensus       103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~  181 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT  181 (1431)
T ss_pred             Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccce
Confidence            776 777766310                                                        011110000  


Q ss_pred             -EEeecccccCCCCchhhccC----------C-CCccceEEechhHHHHHHh-CCCCCCCchhhHHHHH---------hh
Q 048684          196 -IVSKIEGTFGYLPPEFFMHG----------I-ADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWS---------SM  253 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~---------~~  253 (363)
                       ....-..-.+|+|||-+...          . .+++.||||+||++.||++ |++||.-.  .+..++         .+
T Consensus       182 fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--QL~aYr~~~~~~~e~~L  259 (1431)
T KOG1240|consen  182 FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--QLLAYRSGNADDPEQLL  259 (1431)
T ss_pred             EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--HHHhHhccCccCHHHHH
Confidence             00011122359999988542          2 6789999999999999988 68888532  111111         12


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..+-|        .    .+.+++..|++.||..|.++.+.|+.-++.
T Consensus       260 e~Ied--------~----~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  260 EKIED--------V----SLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HhCcC--------c----cHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            22221        1    388999999999999999999999986665

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.18  E-value=5e-11  Score=105.49  Aligned_cols=90  Identities=11%  Similarity=0.021  Sum_probs=71.2

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc--hhHHHH------HHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP--EEMTTD------YLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~------~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      ...++|...++||.|+||.||.... ++..+|||.+.....  +.....      |.+|+..+.++.||+|..+..++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3468999999999999999999766 466899999975432  222233      5799999999999999999987542


Q ss_pred             C---------CeEEEEEccCCCChhhhh
Q 048684          165 G---------GMHLILELSPHGSLASLL  183 (363)
Q Consensus       165 ~---------~~~lv~E~~~~gsL~~~l  183 (363)
                      .         ..+|||||++|.+|.++.
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhh
Confidence            2         368999999999997653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.15  E-value=2.9e-10  Score=106.99  Aligned_cols=200  Identities=14%  Similarity=0.166  Sum_probs=131.7

Q ss_pred             CCccCCcccccCceEEEEEEEcC--CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC----CCcceEEEEEE-cCC-eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLED--GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH----PNIAKMIGYGV-EGG-MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~-~~~-~~  168 (363)
                      .|.+.++||+|+||.||.+....  ...+|+|.......... ..+..|+.++..+.+    +++..+++... ... .+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence            79999999999999999998544  35789998765432221 267789999998873    68999998884 444 68


Q ss_pred             EEEEccCCCChhhhhh---------------------------------hc------cCCCC--------------cee-
Q 048684          169 LILELSPHGSLASLLY---------------------------------AK------WLPDK--------------WTH-  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~---------------------------------~~------~~~~~--------------~~~-  194 (363)
                      +||+.+ |.+|.++..                                 ..      .+...              ... 
T Consensus        98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            888876 457766542                                 00      00000              000 


Q ss_pred             -----------EE----EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC
Q 048684          195 -----------HI----VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP  259 (363)
Q Consensus       195 -----------~~----~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~  259 (363)
                                 ..    .....||..|.++.+..+...+.+.|+||++-++.|++.|..||.................+.
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~  256 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL  256 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence                       00    112449999999999999999999999999999999999999997654322211111111111


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .... ........+..+...+-..+...+|....+...|.
T Consensus       257 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~  295 (322)
T KOG1164|consen  257 LTDR-FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLK  295 (322)
T ss_pred             cccc-ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence            1100 11111223555666666689999999999987754

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.14  E-value=1.8e-10  Score=109.31  Aligned_cols=87  Identities=14%  Similarity=0.149  Sum_probs=69.2

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc--CCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcce-EEEEEEc
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE--DGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAK-MIGYGVE  164 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~-l~~~~~~  164 (363)
                      ....++|...+.||+|+||+||+|...  +|+.||||.+....    .......|.+|+.+|.+++|+|||. ++++   
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            445678999999999999999999853  57888999875331    2233567899999999999999995 4432   


Q ss_pred             CCeEEEEEccCCCChhh
Q 048684          165 GGMHLILELSPHGSLAS  181 (363)
Q Consensus       165 ~~~~lv~E~~~~gsL~~  181 (363)
                      +..++|||||+|++|..
T Consensus        91 ~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             CCcEEEEEccCCCCHHH
Confidence            45899999999998863

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.10  E-value=4.1e-11  Score=122.35  Aligned_cols=90  Identities=18%  Similarity=0.269  Sum_probs=69.3

Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-CCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-DPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  274 (363)
                      ...++|||+.|+|||++....|+..+|+|++|+|+||.+.|..||+++.....+-..+...+ -|.-....+    .+..
T Consensus       214 ~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p----~Ea~  289 (1205)
T KOG0606|consen  214 QDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALP----PEAQ  289 (1205)
T ss_pred             hhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCC----HHHH
Confidence            34678999999999999999999999999999999999999999998865544433332221 111122233    4489


Q ss_pred             HHHHHccccCCCCCC
Q 048684          275 LIASACINQTSACRP  289 (363)
Q Consensus       275 ~li~~cl~~dP~~RP  289 (363)
                      +++...|+.+|..|-
T Consensus       290 dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  290 DLIEQLLRQNPLCRL  304 (1205)
T ss_pred             HHHHHHHHhChHhhc
Confidence            999999999999994

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.95  E-value=1.1e-09  Score=95.13  Aligned_cols=195  Identities=18%  Similarity=0.256  Sum_probs=132.0

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH-PNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|.+.+.||+|+||.+|.|. ..+|..||||.-......   .++..|..+.+.|+| ..|..+..|..+.. -.+||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            4689999999999999999998 788999999986544322   357788999998875 56666666766665 57999


Q ss_pred             EccCCCChhhhhh--------------------------------hccCCCCceeE------------------------
Q 048684          172 ELSPHGSLASLLY--------------------------------AKWLPDKWTHH------------------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~--------------------------------~~~~~~~~~~~------------------------  195 (363)
                      +.+ |.||+++..                                ....|+.+...                        
T Consensus        91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence            987 568877653                                11112211100                        


Q ss_pred             -------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--HHHhhhhhcC----CcCC
Q 048684          196 -------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--MWSSMKELVD----PTLG  262 (363)
Q Consensus       196 -------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~----~~~~  262 (363)
                             --....||..|.+-....+...+.+-|+=|+|-+|....-|..||.+.....-  .+..+.+.--    ..+.
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC  249 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLC  249 (341)
T ss_pred             cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHh
Confidence                   01234699999988777777788899999999999999999999997643222  2222222111    1122


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+|.+    +.-.+.-|-..--.+-|+..-+.+.
T Consensus       250 ~G~P~E----F~myl~Y~R~L~F~E~Pdy~ylrql  280 (341)
T KOG1163|consen  250 KGFPAE----FAMYLNYCRGLGFEEKPDYMYLRQL  280 (341)
T ss_pred             CCCcHH----HHHHHHHHhhcCCCCCCcHHHHHHH
Confidence            234444    6666677777777777776555443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.95  E-value=3.6e-09  Score=95.94  Aligned_cols=145  Identities=22%  Similarity=0.341  Sum_probs=109.0

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      -+|.++++||+|+||..+.|+ +-++++||||.-.....   .-++..|....+.| ..++|..+|-|..++- -.||+|
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            479999999999999999998 67899999997654332   23455677666666 4799999998887765 458888


Q ss_pred             ccCCCChhhhhh--------------------------------hccCCCCc------------eeEE------------
Q 048684          173 LSPHGSLASLLY--------------------------------AKWLPDKW------------THHI------------  196 (363)
Q Consensus       173 ~~~~gsL~~~l~--------------------------------~~~~~~~~------------~~~~------------  196 (363)
                      .+ |.||+|+..                                ....|+.+            .+.+            
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            77 568887753                                00111111            1111            


Q ss_pred             ---------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch
Q 048684          197 ---------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ  244 (363)
Q Consensus       197 ---------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~  244 (363)
                               ...+.||..||+-..-.+...+.+-|+=|+|-++...|-|..||.+..
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence                     123459999999988888899999999999999999999999998754

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.91  E-value=1.9e-09  Score=98.33  Aligned_cols=180  Identities=17%  Similarity=0.180  Sum_probs=102.1

Q ss_pred             CccCCcccccCceEEEEEEE-cCCcEEEEEEecCC--CchhHHHHHHHHHHHHHhCCC----------CCcceEEEE---
Q 048684           98 FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH----------PNIAKMIGY---  161 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~H----------~niv~l~~~---  161 (363)
                      +.....||.|+|+.||.++. .+|+.+|||.....  ......+.+.+|.-....+.+          -.++--++.   
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            44567899999999999996 56999999987532  233456777777655544322          112211111   


Q ss_pred             ------EEcC---------CeEEEEEccCCCChhhhhhh--------------------------------------c--
Q 048684          162 ------GVEG---------GMHLILELSPHGSLASLLYA--------------------------------------K--  186 (363)
Q Consensus       162 ------~~~~---------~~~lv~E~~~~gsL~~~l~~--------------------------------------~--  186 (363)
                            ....         +.+++|+-+. ++|.+++..                                      .  
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence                  1111         2356777664 578776531                                      0  


Q ss_pred             ----cCCCCcee------------EEEeecccccCCCCchhhccC--------CCCccceEEechhHHHHHHhCCCCCCC
Q 048684          187 ----WLPDKWTH------------HIVSKIEGTFGYLPPEFFMHG--------IADEKTDVYAYGVLLLEIITGRQALDS  242 (363)
Q Consensus       187 ----~~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~--------~~~~~sDvwS~Gvvl~elltG~~P~~~  242 (363)
                          .+..+...            .....-..+..|.+||.....        .++.+.|.|++|+++|.|++|+.||+.
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred             eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence                00000000            000102345679999987442        579999999999999999999999986


Q ss_pred             chhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 048684          243 SQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR  288 (363)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  288 (363)
                      .......        +..+. .+. +.+..+..||..+|+.||.+|
T Consensus       253 ~~~~~~~--------~~~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  253 SSPEADP--------EWDFS-RCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CGGGSTS--------GGGGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred             CCccccc--------cccch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence            5322110        00121 233 556669999999999999887

>PRK10345 hypothetical protein; Provisional

Probab=98.84  E-value=1.3e-08  Score=89.39  Aligned_cols=85  Identities=21%  Similarity=0.262  Sum_probs=64.8

Q ss_pred             ccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCC----eE-
Q 048684           99 SHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-----DHPNIAKMIGYGVEGG----MH-  168 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~----~~-  168 (363)
                      ....+||+|+||.||. .-.++. .+||++...... ..+.+.+|+.+++.+     +||||++++|++..+.    .+ 
T Consensus         5 ~~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             CCcceecCCCceEEEE-CCCCcC-eEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            3457899999999996 222344 379988754332 346799999999999     6799999999887653    23 


Q ss_pred             EEEEc--cCCCChhhhhhhc
Q 048684          169 LILEL--SPHGSLASLLYAK  186 (363)
Q Consensus       169 lv~E~--~~~gsL~~~l~~~  186 (363)
                      +|+||  +++|+|.+++...
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~  101 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC  101 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc
Confidence            78999  6689999999654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.79  E-value=9.9e-09  Score=89.05  Aligned_cols=81  Identities=19%  Similarity=0.104  Sum_probs=57.8

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCch-hH------------------------HHHHHHHHHHHHhCCCCCc
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE-EM------------------------TTDYLSELGIIVHVDHPNI  155 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~-~~------------------------~~~~~~E~~~l~~l~H~ni  155 (363)
                      ...||+|+||.||+|...+|+.||||.++..... ..                        ......|+.++.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4679999999999999778999999999754211 00                        0122359999999988877


Q ss_pred             ceEEEEEEcCCeEEEEEccCCCChhhh
Q 048684          156 AKMIGYGVEGGMHLILELSPHGSLASL  182 (363)
Q Consensus       156 v~l~~~~~~~~~~lv~E~~~~gsL~~~  182 (363)
                      .....+... ..+|||||++++++...
T Consensus        82 ~~p~~~~~~-~~~iVmE~i~g~~l~~~  107 (190)
T cd05147          82 PCPEPILLK-SHVLVMEFIGDDGWAAP  107 (190)
T ss_pred             CCCcEEEec-CCEEEEEEeCCCCCcch
Confidence            544433322 34899999998776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.70  E-value=2.5e-08  Score=92.66  Aligned_cols=91  Identities=18%  Similarity=0.147  Sum_probs=66.0

Q ss_pred             cccCCCCchhhccCC------CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          202 GTFGYLPPEFFMHGI------ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       202 gt~~y~aPE~~~~~~------~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      |.-.-||||+....+      .-.|+|.|+.|.+.||+++...||.........-....+.--|.+++..++.    +.+
T Consensus       413 GNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~----~rq  488 (598)
T KOG4158|consen  413 GNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPV----ARQ  488 (598)
T ss_pred             CcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChH----HHH
Confidence            667789999986542      2368999999999999999999998744333222223333335555666665    889


Q ss_pred             HHHHccccCCCCCCCHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~  296 (363)
                      ++...|+.||++|++..-..+
T Consensus       489 lV~~lL~r~pskRvsp~iAAN  509 (598)
T KOG4158|consen  489 LVFDLLKRDPSKRVSPNIAAN  509 (598)
T ss_pred             HHHHHhcCCccccCCccHHHh
Confidence            999999999999999654443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.69  E-value=3.1e-09  Score=107.27  Aligned_cols=201  Identities=17%  Similarity=0.180  Sum_probs=136.6

Q ss_pred             CCCccCCcccccCceEEEEEEE--cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL--EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv  170 (363)
                      ..|.+.+.||+|+|+.|-....  .....+|+|.+.... ..........|..+-..+. |+|++.+++...+.. .+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            4566777799999999998874  334567777776443 2233344556888777776 999999999877766 6788


Q ss_pred             EEccCCCChhhhh-hhcc---------------------CC------------------------------------C-C
Q 048684          171 LELSPHGSLASLL-YAKW---------------------LP------------------------------------D-K  191 (363)
Q Consensus       171 ~E~~~~gsL~~~l-~~~~---------------------~~------------------------------------~-~  191 (363)
                      ++|..+|++.+.+ ....                     +.                                    . .
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~  179 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN  179 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence            8999999998877 3110                     00                                    0 1


Q ss_pred             ceeEEEeeccc-ccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          192 WTHHIVSKIEG-TFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       192 ~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                      .........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+.........+......-. ......+...
T Consensus       180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  258 (601)
T KOG0590|consen  180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG-RFTQLPWNSI  258 (601)
T ss_pred             CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc-ccccCccccC
Confidence            11122334468 9999999999884 5678999999999999999999999765432221111111110 0011122333


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .....+++.+++..+|..|.+..++...
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             ChhhhhcccccccCCchhcccccccccc
Confidence            4457788889999999999999888653

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.64  E-value=4.7e-08  Score=101.64  Aligned_cols=145  Identities=20%  Similarity=0.285  Sum_probs=101.9

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC---CCCcceEEE-EEEcC
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD---HPNIAKMIG-YGVEG  165 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~-~~~~~  165 (363)
                      +++.....|.+.+.||+|+||+||.|...+|+.||+|.-+....-    +|.-=.+++.+|+   -+.|..+.. +...+
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W----EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~  767 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW----EFYICLQVMERLKPQMLPSIMHISSAHVFQN  767 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce----eeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence            344455678899999999999999999777999999987654432    2222234455555   233333333 33345


Q ss_pred             CeEEEEEccCCCChhhhhhhc-------------------------------cCCCCcee--------------------
Q 048684          166 GMHLILELSPHGSLASLLYAK-------------------------------WLPDKWTH--------------------  194 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~-------------------------------~~~~~~~~--------------------  194 (363)
                      ..+||+||.+.|+|.+++...                               ..|+....                    
T Consensus       768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~  847 (974)
T KOG1166|consen  768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR  847 (974)
T ss_pred             cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence            578999999999999887511                               00110000                    


Q ss_pred             ----------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCC
Q 048684          195 ----------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ  238 (363)
Q Consensus       195 ----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~  238 (363)
                                ......++|-.+-.+|+..+..++...|.|.|.-+++-||.|+.
T Consensus       848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence                      12334568888999999999999999999999999999999874

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.64  E-value=1.5e-07  Score=81.65  Aligned_cols=79  Identities=15%  Similarity=0.139  Sum_probs=58.5

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCch------------------------h-HHHHHHHHHHHHHhCCCCCc
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE------------------------E-MTTDYLSELGIIVHVDHPNI  155 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~------------------------~-~~~~~~~E~~~l~~l~H~ni  155 (363)
                      ...||+|+||.||+|...+|+.||||.+......                        . ....+..|...+.++.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999768999999998754211                        0 01223578999999999998


Q ss_pred             ceEEEEEEcCCeEEEEEccCCCChh
Q 048684          156 AKMIGYGVEGGMHLILELSPHGSLA  180 (363)
Q Consensus       156 v~l~~~~~~~~~~lv~E~~~~gsL~  180 (363)
                      .....+.... .+|||||++++++.
T Consensus        82 ~~p~~~~~~~-~~lVmE~~~g~~~~  105 (190)
T cd05145          82 PVPEPILLKK-NVLVMEFIGDDGSP  105 (190)
T ss_pred             CCceEEEecC-CEEEEEEecCCCch
Confidence            6555443333 48999999987553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.61  E-value=1.8e-07  Score=82.12  Aligned_cols=83  Identities=20%  Similarity=0.214  Sum_probs=64.4

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCc--h-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeEEEEEc
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP--E-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVE-GGMHLILEL  173 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~--~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~lv~E~  173 (363)
                      +.||+|++|.||+|.. +|..|+||.......  .     .....+.+|+.++..+.|+||+....++.. ...++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 577899998653221  1     112457899999999999998877666544 448899999


Q ss_pred             cCCCChhhhhhh
Q 048684          174 SPHGSLASLLYA  185 (363)
Q Consensus       174 ~~~gsL~~~l~~  185 (363)
                      ++|++|.+++..
T Consensus        81 ~~G~~L~~~~~~   92 (211)
T PRK14879         81 IEGEPLKDLINS   92 (211)
T ss_pred             eCCcCHHHHHHh
Confidence            999999988753

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.59  E-value=2.6e-07  Score=80.49  Aligned_cols=141  Identities=9%  Similarity=-0.035  Sum_probs=93.4

Q ss_pred             ccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc--h-hHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeEEEEEcc
Q 048684           99 SHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP--E-EMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGGMHLILELS  174 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~--~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~lv~E~~  174 (363)
                      .+...|++|+||+||.+.. .+..++.+.+....-  . -....|.+|+++|.+|. |++|++++++   ...+++|||+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCEEEEEeee
Confidence            3456899999999997766 577788777764432  1 11235789999999995 5889999987   4479999999


Q ss_pred             CCCChhhhhh------------------h-ccCCCCc--eeEEEe-----------e-----------------------
Q 048684          175 PHGSLASLLY------------------A-KWLPDKW--THHIVS-----------K-----------------------  199 (363)
Q Consensus       175 ~~gsL~~~l~------------------~-~~~~~~~--~~~~~~-----------~-----------------------  199 (363)
                      .|.+|...+.                  . .....+.  ...++.           .                       
T Consensus        81 ~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~l  160 (218)
T PRK12274         81 AGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHL  160 (218)
T ss_pred             cCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHH
Confidence            9998865431                  0 0000011  001100           0                       


Q ss_pred             ----cccccCCCCchhhccC-CCC-ccceEEechhHHHHHHhCCCCCCCc
Q 048684          200 ----IEGTFGYLPPEFFMHG-IAD-EKTDVYAYGVLLLEIITGRQALDSS  243 (363)
Q Consensus       200 ----~~gt~~y~aPE~~~~~-~~~-~~sDvwS~Gvvl~elltG~~P~~~~  243 (363)
                          ..+++.|++|+-..-- ..+ ...++++.|.-+|.++||+.+..++
T Consensus       161 lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        161 LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                0146667777654322 223 5678999999999999999887543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.55  E-value=2.3e-07  Score=80.80  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=60.8

Q ss_pred             cccccCceEEEEEEEcCCcEEEEEEecCCC--ch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCeEEEEEcc
Q 048684          103 LIGQGGYAEVYKGQLEDGQFVAIKRLTRGS--PE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGV-EGGMHLILELS  174 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~--~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~lv~E~~  174 (363)
                      +||+|+||.||+|.+ +|..|++|......  ..     .....+.+|+.++..+.|+++.....++. ....++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999996 47889999865322  11     11356789999999999887654444433 34478999999


Q ss_pred             CCCChhhhhhh
Q 048684          175 PHGSLASLLYA  185 (363)
Q Consensus       175 ~~gsL~~~l~~  185 (363)
                      +|++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999887644

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.48  E-value=4.9e-07  Score=78.85  Aligned_cols=90  Identities=21%  Similarity=0.165  Sum_probs=65.4

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCch---------------------hHHHHHHHHHHHHH
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE---------------------EMTTDYLSELGIIV  148 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~---------------------~~~~~~~~E~~~l~  148 (363)
                      ++......|...+.||+|+||.||++...+|+.||||.+......                     .....+..|+.++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            444444457888999999999999999878999999987643210                     01123678899999


Q ss_pred             hCCCCC--cceEEEEEEcCCeEEEEEccCCCChhhh
Q 048684          149 HVDHPN--IAKMIGYGVEGGMHLILELSPHGSLASL  182 (363)
Q Consensus       149 ~l~H~n--iv~l~~~~~~~~~~lv~E~~~~gsL~~~  182 (363)
                      .+.|++  ++..++.   ...++||||+++++|..+
T Consensus        89 ~l~~~~i~v~~~~~~---~~~~lv~e~~~g~~L~~~  121 (198)
T cd05144          89 ALYEEGFPVPKPIDW---NRHAVVMEYIDGVELYRV  121 (198)
T ss_pred             HHHHcCCCCCceeec---CCceEEEEEeCCcchhhc
Confidence            998874  4455443   346899999999988754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.47  E-value=6.2e-07  Score=90.29  Aligned_cols=89  Identities=19%  Similarity=0.272  Sum_probs=65.8

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEe-cCC-Cch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRL-TRG-SPE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~-~~~-~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~  166 (363)
                      ...|...++||+|+||+||+|.+.... +++|.. ... ...     .....+.+|+.++..++|++|+..+.++... .
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            445567889999999999999875433 444432 211 111     1235688999999999999999887766654 4


Q ss_pred             eEEEEEccCCCChhhhhh
Q 048684          167 MHLILELSPHGSLASLLY  184 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~  184 (363)
                      .++||||+++++|.+++.
T Consensus       411 ~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             CEEEEEecCCCcHHHHHH
Confidence            789999999999998874

>smart00090 RIO RIO-like kinase

Probab=98.39  E-value=7.3e-07  Score=80.08  Aligned_cols=85  Identities=19%  Similarity=0.126  Sum_probs=62.4

Q ss_pred             CCCccCCcccccCceEEEEEE--EcCCcEEEEEEecCCCch-----------------------hHHHHHHHHHHHHHhC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ--LEDGQFVAIKRLTRGSPE-----------------------EMTTDYLSELGIIVHV  150 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~--~~~g~~vAvK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l  150 (363)
                      -.|.+.+.||+|+||.||+|.  ..+|+.||||.+.....+                       .....+..|+.++.++
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            358888999999999999998  567999999998743210                       0112356899999999


Q ss_pred             CCCC--cceEEEEEEcCCeEEEEEccCCCChhhhh
Q 048684          151 DHPN--IAKMIGYGVEGGMHLILELSPHGSLASLL  183 (363)
Q Consensus       151 ~H~n--iv~l~~~~~~~~~~lv~E~~~~gsL~~~l  183 (363)
                      .|.+  +.+++++   ...++||||+++++|....
T Consensus       108 ~~~~i~~p~~~~~---~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      108 YEAGVPVPKPIAW---RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             HhcCCCCCeeeEe---cCceEEEEEecCCcccccc
Confidence            7633  4445543   3468999999998886543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=1.4e-07  Score=85.81  Aligned_cols=142  Identities=20%  Similarity=0.245  Sum_probs=91.7

Q ss_pred             HHhCCCCCcceEEEEEEcCC------eEEEEEccCCCChhhhhhhcc------------------------C----C---
Q 048684          147 IVHVDHPNIAKMIGYGVEGG------MHLILELSPHGSLASLLYAKW------------------------L----P---  189 (363)
Q Consensus       147 l~~l~H~niv~l~~~~~~~~------~~lv~E~~~~gsL~~~l~~~~------------------------~----~---  189 (363)
                      |-.+.|.|||+++.|+.+..      ..++.|||..|+|..+|..-.                        +    |   
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            34567999999999876543      578899999999999986100                        0    0   


Q ss_pred             -CCc-eeE--------EEe---------------------ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCC
Q 048684          190 -DKW-THH--------IVS---------------------KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ  238 (363)
Q Consensus       190 -~~~-~~~--------~~~---------------------~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~  238 (363)
                       ... ...        +..                     .-.|-++|.+||+-.....+.++|||+||+..+||..|..
T Consensus       201 hgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             cCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence             000 000        000                     0126788999999888888999999999999999998874


Q ss_pred             C-CCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          239 A-LDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       239 P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      - -.+.....+......-++  .+....       -.+++..|++..|..||+|..++.+
T Consensus       281 q~tnseS~~~~ee~ia~~i~--~len~l-------qr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  281 QSTNSESKVEVEENIANVII--GLENGL-------QRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             ccCCCcceeehhhhhhhhee--eccCcc-------ccCcCcccccCCCCCCcchhhhhcC
Confidence            3 333322222111111111  000000       2356789999999999999999865

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.29  E-value=1.1e-07  Score=97.77  Aligned_cols=197  Identities=15%  Similarity=0.150  Sum_probs=128.4

Q ss_pred             HhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCch--hHHHHHHHHHHHHHhCCCCCcceEEEE-EEcCCeE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPE--EMTTDYLSELGIIVHVDHPNIAKMIGY-GVEGGMH  168 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~-~~~~~~~  168 (363)
                      ...+.|.+.+-+-+|.|+.++-+. ...|...++|.......-  ...+...++-.++-..+||-++...-- -.....+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            345778888889999999999886 444655566654322110  012233334344444456666655443 2234489


Q ss_pred             EEEEccCCCChhhhhhhcc--------------------C-------------------------CCCc-----------
Q 048684          169 LILELSPHGSLASLLYAKW--------------------L-------------------------PDKW-----------  192 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------------~-------------------------~~~~-----------  192 (363)
                      |+++|+.+|+|...|+...                    +                         +...           
T Consensus       881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            9999999998887765100                    0                         0000           


Q ss_pred             ---------------------------eeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh
Q 048684          193 ---------------------------THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK  245 (363)
Q Consensus       193 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~  245 (363)
                                                 ..+.-..+.||+.|++||...+......+|+|++|++++|.++|.+||.....
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence                                       00111234599999999999999999999999999999999999999998776


Q ss_pred             hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 048684          246 SLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMS  292 (363)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~  292 (363)
                      ............. .  ...+.+......+++...+..+|.+|..+.
T Consensus      1041 q~~f~ni~~~~~~-~--p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 QQIFENILNRDIP-W--PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhccccCCCC-C--CCCccccChhhhhhhhhhhccCchhccCcc
Confidence            6555433333221 1  123344555688888889999999998776

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.13  E-value=1.4e-06  Score=85.17  Aligned_cols=195  Identities=20%  Similarity=0.260  Sum_probs=126.1

Q ss_pred             CCCccCCcccc--cCceEEEEEEE---cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-e
Q 048684           96 DNFSHENLIGQ--GGYAEVYKGQL---EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        96 ~~f~~~~~lG~--G~fg~Vy~~~~---~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~  167 (363)
                      ..|.....+|.  |.+|.||.+..   .++..+|+|.-+.... ......=.+|+....+++ |+|.|+.+..+...+ .
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            35666788999  99999999975   5688899998543221 112234457777777885 999999887777666 6


Q ss_pred             EEEEEccCCCChhhhhhhc------------------------------------------cCCCCceeEE---------
Q 048684          168 HLILELSPHGSLASLLYAK------------------------------------------WLPDKWTHHI---------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~------------------------------------------~~~~~~~~~~---------  196 (363)
                      ++-+|+|. .+|..+.+..                                          .....|....         
T Consensus       194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~  272 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK  272 (524)
T ss_pred             eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence            67778775 5666654310                                          0011111000         


Q ss_pred             ------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          197 ------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       197 ------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                                  ....-|...|++||.. .+.++..+||||+|.++.+..+|-.+....  ....|..+..+..+   ..
T Consensus       273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g--~~~~W~~~r~~~ip---~e  346 (524)
T KOG0601|consen  273 ISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVG--KNSSWSQLRQGYIP---LE  346 (524)
T ss_pred             ccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCC--CCCCccccccccCc---hh
Confidence                        0111366779999987 467899999999999999999987665432  11223333333321   22


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +-.....++...+.++++.+|..|++...+...
T Consensus       347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             hhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            222223346668889999999999999887753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.12  E-value=9e-06  Score=66.42  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=63.1

Q ss_pred             cCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC--CCcceEEEEEEcCC-eEEEEEccCC
Q 048684          100 HENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--PNIAKMIGYGVEGG-MHLILELSPH  176 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~-~~lv~E~~~~  176 (363)
                      +.+.||.|+++.||++...+ ..++||.......   ...+..|+.++..++|  .++++++++....+ .+++|||+++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            34679999999999999754 7799999865433   4578899999999976  58999988776544 8899999999


Q ss_pred             CChhh
Q 048684          177 GSLAS  181 (363)
Q Consensus       177 gsL~~  181 (363)
                      +.+..
T Consensus        78 ~~~~~   82 (155)
T cd05120          78 ETLDE   82 (155)
T ss_pred             eeccc
Confidence            87764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.95  E-value=2.7e-05  Score=66.89  Aligned_cols=76  Identities=24%  Similarity=0.312  Sum_probs=50.8

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCch-hHHHHH----------------------HHHHHHHHhCCCCC--c
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE-EMTTDY----------------------LSELGIIVHVDHPN--I  155 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~----------------------~~E~~~l~~l~H~n--i  155 (363)
                      .+.||+|+||+||+|...+|+.||||.+...... .....+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999778999999998653311 001111                      35666666665433  4


Q ss_pred             ceEEEEEEcCCeEEEEEccCCCCh
Q 048684          156 AKMIGYGVEGGMHLILELSPHGSL  179 (363)
Q Consensus       156 v~l~~~~~~~~~~lv~E~~~~gsL  179 (363)
                      .+.+++   ...++||||+++|.+
T Consensus        82 ~~~~~~---~~~~lv~e~~~g~~~  102 (187)
T cd05119          82 PKPIDL---NRHVLVMEFIGGDGI  102 (187)
T ss_pred             CceEec---CCCEEEEEEeCCCCc
Confidence            444443   236899999999654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.84  E-value=4.4e-05  Score=74.82  Aligned_cols=83  Identities=18%  Similarity=0.127  Sum_probs=55.4

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhH---------------------------------H------HHHHH
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEM---------------------------------T------TDYLS  142 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~---------------------------------~------~~~~~  142 (363)
                      +.||.|++|.||+|++.+|+.||||+...+.....                                 .      -.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            67999999999999998999999999865421110                                 0      02445


Q ss_pred             HHHHHHhC----CCCCcceEEEEEE--cCCeEEEEEccCCCChhhhhh
Q 048684          143 ELGIIVHV----DHPNIAKMIGYGV--EGGMHLILELSPHGSLASLLY  184 (363)
Q Consensus       143 E~~~l~~l----~H~niv~l~~~~~--~~~~~lv~E~~~~gsL~~~l~  184 (363)
                      |+..+.++    .|.+-|.+-..+.  ....+|||||++|++|.++..
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence            66655555    2333333322222  234789999999999988764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.80  E-value=1.5e-05  Score=79.42  Aligned_cols=87  Identities=15%  Similarity=0.156  Sum_probs=56.9

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC-CcEEEEEEecCCCch---------------------------------hHHHH-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGSPE---------------------------------EMTTD-  139 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~~~~~~~~---------------------------------~~~~~-  139 (363)
                      ...|+. +.||+|++|.||+|++.+ |+.||||++.++-.+                                 +..+. 
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            345776 789999999999999876 999999998754210                                 11111 


Q ss_pred             -----HHHHHHHHHhC----CCCCcceEEEEEE--cCCeEEEEEccCCCChhhh
Q 048684          140 -----YLSELGIIVHV----DHPNIAKMIGYGV--EGGMHLILELSPHGSLASL  182 (363)
Q Consensus       140 -----~~~E~~~l~~l----~H~niv~l~~~~~--~~~~~lv~E~~~~gsL~~~  182 (363)
                           |.+|+..+.++    .+.+.|.+-.++.  ....+|||||+.|+.|.++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence                 34455444444    2444444433322  2346899999999998764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.75  E-value=2.4e-05  Score=76.65  Aligned_cols=199  Identities=17%  Similarity=0.120  Sum_probs=126.7

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE--cCCcEEEEEEecCCCchhHH-HHHHHHHHHHHhCC-CCCcceEEE-EEEcC
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL--EDGQFVAIKRLTRGSPEEMT-TDYLSELGIIVHVD-HPNIAKMIG-YGVEG  165 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~~~~~~~~~~~-~~~~~E~~~l~~l~-H~niv~l~~-~~~~~  165 (363)
                      ....+.+|..+..||.|.|+.||+...  .++..+++|.+......... ..-+.|+.+...+. |.+++..+. |....
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            445567899999999999999999863  56889999998755422211 22346777776664 888888765 55556


Q ss_pred             CeEEEEEccCCCChhhhhhhc--------------------cCCC-------Cc--eeEEEe------------------
Q 048684          166 GMHLILELSPHGSLASLLYAK--------------------WLPD-------KW--THHIVS------------------  198 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~--------------------~~~~-------~~--~~~~~~------------------  198 (363)
                      +.|+-.|||.++++...+...                    .+..       .+  ...+..                  
T Consensus       340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~  419 (524)
T KOG0601|consen  340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF  419 (524)
T ss_pred             cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce
Confidence            677888999999876554200                    0000       00  000000                  


Q ss_pred             ---ecccccCCC--CchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          199 ---KIEGTFGYL--PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       199 ---~~~gt~~y~--aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                         ...++-++.  +|.......+..+.|+||||..+.+.++|..--.    ....|..+....-+.+...    . ..+
T Consensus       420 ~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~----~~~~~~~i~~~~~p~~~~~----~-~~~  490 (524)
T KOG0601|consen  420 SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE----SGVQSLTIRSGDTPNLPGL----K-LQL  490 (524)
T ss_pred             ecccccccccccccchhhccccccccccccccccccccccccCcccCc----ccccceeeecccccCCCch----H-Hhh
Confidence               001222233  5555566778999999999999999999875432    2223333333333333221    1 447


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHh
Q 048684          274 LLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ..+..-+...++..||.+.++..+.
T Consensus       491 q~~~kv~~~~~~~~~~l~~~l~~~~  515 (524)
T KOG0601|consen  491 QVLLKVMINPDRKRRPSAVELSLHS  515 (524)
T ss_pred             hhhhhhhcCCccccchhhhhhcccc
Confidence            7777888999999999988877654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.51  E-value=0.00024  Score=62.47  Aligned_cols=82  Identities=13%  Similarity=0.141  Sum_probs=62.6

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC--CCcceEEEEEEcC----CeEEEEEccC
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--PNIAKMIGYGVEG----GMHLILELSP  175 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~----~~~lv~E~~~  175 (363)
                      +.||.|.++.||++...+|..+++|.............+..|+.++..+.+  .++.+++.+....    ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            568999999999999876788999997654321124578899999999975  4467788877653    3689999999


Q ss_pred             CCChhhhh
Q 048684          176 HGSLASLL  183 (363)
Q Consensus       176 ~gsL~~~l  183 (363)
                      |+++.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            98776543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.39  E-value=0.00062  Score=61.20  Aligned_cols=83  Identities=17%  Similarity=0.236  Sum_probs=60.4

Q ss_pred             Cccc-ccCceEEEEEEEcCCcEEEEEEecCCCc------------hhHHHHHHHHHHHHHhCCCCCc--ceEEEEEEcCC
Q 048684          102 NLIG-QGGYAEVYKGQLEDGQFVAIKRLTRGSP------------EEMTTDYLSELGIIVHVDHPNI--AKMIGYGVEGG  166 (363)
Q Consensus       102 ~~lG-~G~fg~Vy~~~~~~g~~vAvK~~~~~~~------------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~  166 (363)
                      ..|| .||.|+||.+... +..++||.+.....            ......+.+|+.++..++|++|  +..+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            5688 8999999999875 67789998753210            1123567899999999998885  67777644322


Q ss_pred             -----eEEEEEccCC-CChhhhhhh
Q 048684          167 -----MHLILELSPH-GSLASLLYA  185 (363)
Q Consensus       167 -----~~lv~E~~~~-gsL~~~l~~  185 (363)
                           .++||||+++ .+|.+++..
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc
Confidence                 2599999997 688877643

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.35  E-value=0.00035  Score=69.64  Aligned_cols=61  Identities=25%  Similarity=0.281  Sum_probs=47.8

Q ss_pred             EEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeEEEEEccC
Q 048684          114 KGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-GGMHLILELSP  175 (363)
Q Consensus       114 ~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~lv~E~~~  175 (363)
                      .|. ..++.+|.|...+.... +......+-++-|+.++||||++++..... +.+|||+|-+.
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            454 56788999998876554 445567788899999999999999996554 45899999875

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.17  E-value=0.001  Score=55.86  Aligned_cols=76  Identities=13%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCeEEEEEccCCCChh
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA-KMIGYGVEGGMHLILELSPHGSLA  180 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~lv~E~~~~gsL~  180 (363)
                      +.|+.|.++.||++... |..|++|........  ...+..|+.++..+.+.+++ +++++. ....++||||++|.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFD-PETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEe-CCCCeEEEEecCCCccc
Confidence            56899999999999875 778999987544321  23567899999988765554 455443 33468999999998876


Q ss_pred             h
Q 048684          181 S  181 (363)
Q Consensus       181 ~  181 (363)
                      .
T Consensus        80 ~   80 (170)
T cd05151          80 T   80 (170)
T ss_pred             c
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.77  E-value=0.00034  Score=69.98  Aligned_cols=95  Identities=21%  Similarity=0.417  Sum_probs=63.8

Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .-...|.|||++.+...+.++|+||+||++|.+.. |+.-+..... ...+.......+.. ...++.....++.+-+.+
T Consensus       170 ~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~~~~~~~-~~~~s~~~p~el~~~l~k  247 (700)
T KOG2137|consen  170 QPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSRNLLNAG-AFGYSNNLPSELRESLKK  247 (700)
T ss_pred             ccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhhcccccc-cccccccCcHHHHHHHHH
Confidence            34567999999999889999999999999999994 5544443322 22222111111111 111334444558888899


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      .+..++..||++.++...
T Consensus       248 ~l~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  248 LLNGDSAVRPTLDLLLSI  265 (700)
T ss_pred             HhcCCcccCcchhhhhcc
Confidence            999999999988888643

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.75  E-value=0.0041  Score=60.77  Aligned_cols=151  Identities=17%  Similarity=0.212  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEEEEccCCCChhhhhhhccCCCC-ce-e-----EEEeecccccCCCC
Q 048684          138 TDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLILELSPHGSLASLLYAKWLPDK-WT-H-----HIVSKIEGTFGYLP  208 (363)
Q Consensus       138 ~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv~E~~~~gsL~~~l~~~~~~~~-~~-~-----~~~~~~~gt~~y~a  208 (363)
                      .+++-...+++.+.|+|+..++.+.....  ..+|||++. .+|++.+..+.+... .. +     ++..+.+.-+.|- 
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~l~~~s~~~~~~~~~~~~~~td~~~t~~-  104 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGNLKDESLLAHGVLHLNIIYITDHFLTKY-  104 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcccchhhhcccccceehhhhccccccccC-
Confidence            45666778888999999999998876544  678899996 599988875442111 00 0     0000001001111 


Q ss_pred             chhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-cCC-----CCCCHHHHHHHHHHHHHccc
Q 048684          209 PEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-TLG-----DAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       209 PE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~l~~li~~cl~  282 (363)
                           .....+|+||||+|.++.|+.-|..-+..............-..++ ...     ...-.+....+..+...|+-
T Consensus       105 -----~~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~  179 (725)
T KOG1093|consen  105 -----PSPIGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLW  179 (725)
T ss_pred             -----CCCCCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCc
Confidence                 1123479999999999999999876554322111111111111110 000     00112334557888999999


Q ss_pred             cCCCCCCCHHHHH
Q 048684          283 QTSACRPQMSKVV  295 (363)
Q Consensus       283 ~dP~~RPt~~evl  295 (363)
                      ..|..||...++.
T Consensus       180 ~~~~ir~l~~~~~  192 (725)
T KOG1093|consen  180 LEPIIRPLPMELS  192 (725)
T ss_pred             cccccccchhHHh
Confidence            9999988655543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.0055  Score=51.83  Aligned_cols=78  Identities=24%  Similarity=0.321  Sum_probs=58.2

Q ss_pred             ccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcc-eEEEEEEcCCeEEEEEccCCC
Q 048684           99 SHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA-KMIGYGVEGGMHLILELSPHG  177 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~lv~E~~~~g  177 (363)
                      ...+.||+|++|.||+|.+. |..+|+|.-..+..   ...+..|+++|..+.--++. ++|.|..+   ++.|||..|-
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~---r~~l~kEakiLeil~g~~~~p~vy~yg~~---~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP---RRNLEKEAKILEILAGEGVTPEVYFYGED---FIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-CceEEEEEecCCcc---hhhHHHHHHHHHHhhhcCCCceEEEechh---hhhhhhhcCc
Confidence            34578999999999999986 66899998665433   56888999999998866654 45555433   3559999987


Q ss_pred             Chhhhh
Q 048684          178 SLASLL  183 (363)
Q Consensus       178 sL~~~l  183 (363)
                      .|.+.-
T Consensus        98 ~L~~~~  103 (201)
T COG2112          98 PLGKLE  103 (201)
T ss_pred             chhhhh
Confidence            776543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.33  E-value=0.00096  Score=66.43  Aligned_cols=139  Identities=15%  Similarity=0.128  Sum_probs=89.2

Q ss_pred             CccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCC-cceEEEEE-EcCCeEEEEEccC
Q 048684           98 FSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN-IAKMIGYG-VEGGMHLILELSP  175 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~-~~~~~~lv~E~~~  175 (363)
                      +.....+++|+++.+||.+-.--+....+.+...      ....-++++|-+++||| .|..++-+ .+...+++++++.
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS  317 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence            3444568999999999987322222335554322      23345788999999999 55555433 3334789999998


Q ss_pred             CC-Chhhhh-----------hhc----------cCCCC--cee----------------------E--EEeecccccCCC
Q 048684          176 HG-SLASLL-----------YAK----------WLPDK--WTH----------------------H--IVSKIEGTFGYL  207 (363)
Q Consensus       176 ~g-sL~~~l-----------~~~----------~~~~~--~~~----------------------~--~~~~~~gt~~y~  207 (363)
                      +| +-....           +..          .+...  +..                      .  .-....+|+.|+
T Consensus       318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~  397 (829)
T KOG0576|consen  318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPL  397 (829)
T ss_pred             CCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCcccccccCCCCCCCC
Confidence            87 211111           000          00000  000                      0  122345899999


Q ss_pred             CchhhccCCCCccceEEechhHHHHHHhCCCCCCC
Q 048684          208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDS  242 (363)
Q Consensus       208 aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~  242 (363)
                      |||+...+.+..+.|+||+|+-..+|.-|-+|-..
T Consensus       398 ~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  398 APEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             CchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            99999999999999999999988888888877543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.22  E-value=0.029  Score=54.97  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=53.0

Q ss_pred             CceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCeEEEEEccCC-CChh
Q 048684          108 GYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV-----EGGMHLILELSPH-GSLA  180 (363)
Q Consensus       108 ~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-----~~~~~lv~E~~~~-gsL~  180 (363)
                      .-.+.|++. ..||..|++|++..+.... ...-..-+++++++.|+|||+|..++.     +..+++|++|+|+ ++|.
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccC-cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            345789997 5679999999994333221 223334578899999999999998554     2337899999986 4565


Q ss_pred             hhh
Q 048684          181 SLL  183 (363)
Q Consensus       181 ~~l  183 (363)
                      ++-
T Consensus       367 d~~  369 (655)
T KOG3741|consen  367 DLY  369 (655)
T ss_pred             HHH
Confidence            544

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.12  E-value=0.011  Score=56.51  Aligned_cols=103  Identities=15%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             ccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhC-CCCCCCchhh----HHHH-H----------hhhhhcCC
Q 048684          201 EGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITG-RQALDSSQKS----LVMW-S----------SMKELVDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG-~~P~~~~~~~----~~~~-~----------~~~~~~~~  259 (363)
                      +|...|.+||.-.     +..-+...|-|.|||++++++.| +.||.+....    .... .          .......|
T Consensus       177 Vg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p  256 (637)
T COG4248         177 VGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKP  256 (637)
T ss_pred             cCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCC
Confidence            5888999999765     33457899999999999999886 9999764210    0000 0          11111122


Q ss_pred             cCCCCCCHHHHHHHHHHHHHcccc--CCCCCCCHHHHHHHhhcChH
Q 048684          260 TLGDAYNTEQLTRLLLIASACINQ--TSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       260 ~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPt~~evl~~L~~~~~  303 (363)
                      ........-....+..+..+|+..  ++.-|||++--+..|.....
T Consensus       257 ~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         257 PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence            222222223345588888899865  47799999998887754433

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.93  E-value=0.077  Score=46.15  Aligned_cols=66  Identities=20%  Similarity=0.370  Sum_probs=49.9

Q ss_pred             CCCccCCcccccCc-eEEEEEEEcCCcEEEEEEecC---CCc-------h----------hHHHHHHHHHHHHHhCC---
Q 048684           96 DNFSHENLIGQGGY-AEVYKGQLEDGQFVAIKRLTR---GSP-------E----------EMTTDYLSELGIIVHVD---  151 (363)
Q Consensus        96 ~~f~~~~~lG~G~f-g~Vy~~~~~~g~~vAvK~~~~---~~~-------~----------~~~~~~~~E~~~l~~l~---  151 (363)
                      .+++..+.||.|.. |.||++.+. |+.+|+|....   ...       .          ....-|.+|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78889999999999 999999995 88999999321   100       0          12335889999888874   


Q ss_pred             CCCc--ceEEEEE
Q 048684          152 HPNI--AKMIGYG  162 (363)
Q Consensus       152 H~ni--v~l~~~~  162 (363)
                      +.++  |+.+||.
T Consensus       116 ~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  116 REGLWAVKCHGYL  128 (207)
T ss_pred             ccCceEEEeeEEE
Confidence            5566  8888875

>PLN02876 acyl-CoA dehydrogenase

Probab=94.78  E-value=0.096  Score=55.75  Aligned_cols=79  Identities=11%  Similarity=0.196  Sum_probs=57.6

Q ss_pred             CCcccccCceEEEEEEEcCC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCc--ceEEEEEEcC----CeEEE
Q 048684          101 ENLIGQGGYAEVYKGQLEDG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNI--AKMIGYGVEG----GMHLI  170 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~ni--v~l~~~~~~~----~~~lv  170 (363)
                      ...|+.|.++.+|+....++   ..+++|+............+.+|+.+|..+. |++|  .+++++|.+.    ..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            45689999999999886543   3577777654332222356889999999995 7765  7888888764    37899


Q ss_pred             EEccCCCCh
Q 048684          171 LELSPHGSL  179 (363)
Q Consensus       171 ~E~~~~gsL  179 (363)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998654

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.59  E-value=0.019  Score=45.57  Aligned_cols=48  Identities=25%  Similarity=0.391  Sum_probs=35.6

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHh
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH  149 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~  149 (363)
                      .|+ ...||.|+.|.||+|++.+|+.||||+...+-    .+.+...+.+|..
T Consensus        13 ~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i----~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   13 EFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPGI----EEQIEADLRILRR   60 (119)
T ss_pred             HCC-cchhhheehhhheeeeecccchhhhhhcchHH----HHHHHHHHHHHHH
Confidence            444 36799999999999999889999999987543    3344555555543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PRK10593 hypothetical protein; Provisional

Probab=94.14  E-value=0.25  Score=45.84  Aligned_cols=77  Identities=16%  Similarity=0.034  Sum_probs=56.5

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC---CCcceEEEEEEc----CCeEEEEEc
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH---PNIAKMIGYGVE----GGMHLILEL  173 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~----~~~~lv~E~  173 (363)
                      .+.||.|..+.||.....+|+ +.+|..+....   ...|..|...|+.+.-   -.+.+++++|..    +..+||||+
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGN-PMPLMARSFST---PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeecCCccceeEEEEEcCCCC-EEEEEeccccc---chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            456999999999999876564 66676432111   2478899999998853   367788887754    337999999


Q ss_pred             cCCCChhh
Q 048684          174 SPHGSLAS  181 (363)
Q Consensus       174 ~~~gsL~~  181 (363)
                      ++++++.+
T Consensus        95 i~G~~~~~  102 (297)
T PRK10593         95 LRGVSVEA  102 (297)
T ss_pred             cCCEecCC
Confidence            99987753

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.33  E-value=0.23  Score=49.58  Aligned_cols=35  Identities=29%  Similarity=0.402  Sum_probs=29.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRG  131 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~  131 (363)
                      ..|+. .-|+.++-|.||+|++.+|+.||||+...+
T Consensus       126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            34554 579999999999999999999999996543

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.22  E-value=0.18  Score=50.37  Aligned_cols=28  Identities=29%  Similarity=0.396  Sum_probs=25.5

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEec
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLT  129 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~  129 (363)
                      +.||.-+.|.||+|++++|+.||||+-.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~  194 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQH  194 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecC
Confidence            5799999999999999999999999854

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.35  E-value=0.33  Score=42.44  Aligned_cols=76  Identities=13%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCC--CcceEEEEEEcCC----eEEEEEccC
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP--NIAKMIGYGVEGG----MHLILELSP  175 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~----~~lv~E~~~  175 (363)
                      +.|+.|..+.||+....+ ..+++|.....   .....+..|+.++..+...  -+.+++.++....    .+++|++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            468999999999999876 58999987543   2356777899888888533  3566776554332    578999999


Q ss_pred             CCChhh
Q 048684          176 HGSLAS  181 (363)
Q Consensus       176 ~gsL~~  181 (363)
                      +..+..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            877765

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=91.89  E-value=0.48  Score=43.08  Aligned_cols=92  Identities=20%  Similarity=0.141  Sum_probs=62.0

Q ss_pred             cCHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc---------------------hhHHHHHHHHH
Q 048684           86 FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP---------------------EEMTTDYLSEL  144 (363)
Q Consensus        86 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~---------------------~~~~~~~~~E~  144 (363)
                      +.+..+..-..-..++..||-|-=+.||.|..+.|..+|||.-..+..                     .-.+....+|.
T Consensus        81 LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf  160 (304)
T COG0478          81 LALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF  160 (304)
T ss_pred             HHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence            334444443334566789999999999999998999999997432211                     01123356788


Q ss_pred             HHHHhCCCC--CcceEEEEEEcCCeEEEEEccCCCChh
Q 048684          145 GIIVHVDHP--NIAKMIGYGVEGGMHLILELSPHGSLA  180 (363)
Q Consensus       145 ~~l~~l~H~--niv~l~~~~~~~~~~lv~E~~~~gsL~  180 (363)
                      ++|.+|.-.  .|.+.+++   +...+||||..|-.|.
T Consensus       161 ~~L~~L~~~G~~VP~P~~~---nRHaVvMe~ieG~eL~  195 (304)
T COG0478         161 EALQRLYPEGVKVPKPIAW---NRHAVVMEYIEGVELY  195 (304)
T ss_pred             HHHHHhhhcCCCCCCcccc---ccceeeeehcccceee
Confidence            888888644  56665554   2367999999986554

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=91.53  E-value=0.94  Score=43.85  Aligned_cols=76  Identities=14%  Similarity=0.071  Sum_probs=53.6

Q ss_pred             CcccccCceEEEEEEEcCC-cEEEEEEecCC-----Cc-hhHHHHHHHHHHHHHhCC---CCCcceEEEEEEcCCeEEEE
Q 048684          102 NLIGQGGYAEVYKGQLEDG-QFVAIKRLTRG-----SP-EEMTTDYLSELGIIVHVD---HPNIAKMIGYGVEGGMHLIL  171 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g-~~vAvK~~~~~-----~~-~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~lv~  171 (363)
                      +.||.|.++.||++...+| +.|+||.-...     .. .-...++..|.+.|..+.   ..++.+++.+.. ...++||
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~-~~~~lVM  110 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE-ELAVTVM  110 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC-CCCEEEE
Confidence            5799999999999998776 48999984311     00 112456777888887763   356777777743 3368999


Q ss_pred             EccCCCC
Q 048684          172 ELSPHGS  178 (363)
Q Consensus       172 E~~~~gs  178 (363)
                      ||+++..
T Consensus       111 E~L~~~~  117 (401)
T PRK09550        111 EDLSDHK  117 (401)
T ss_pred             ecCCCcc
Confidence            9998744

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=91.33  E-value=1.1  Score=39.01  Aligned_cols=75  Identities=11%  Similarity=0.019  Sum_probs=50.8

Q ss_pred             CcccccCceEEEEEEEcC-------CcEEEEEEecCCCc---------------------hhHHHHHH----HHHHHHHh
Q 048684          102 NLIGQGGYAEVYKGQLED-------GQFVAIKRLTRGSP---------------------EEMTTDYL----SELGIIVH  149 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~-------g~~vAvK~~~~~~~---------------------~~~~~~~~----~E~~~l~~  149 (363)
                      ..||.|-=+.||.|...+       +..+|||..+....                     ......+.    +|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            579999999999998542       47899998642110                     01122333    79999998


Q ss_pred             CC--CCCcceEEEEEEcCCeEEEEEccCCCCh
Q 048684          150 VD--HPNIAKMIGYGVEGGMHLILELSPHGSL  179 (363)
Q Consensus       150 l~--H~niv~l~~~~~~~~~~lv~E~~~~gsL  179 (363)
                      +.  .-++...+++   ...+|||||+.++.+
T Consensus        83 l~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~  111 (197)
T cd05146          83 MQKAGIPCPEVVVL---KKHVLVMSFIGDDQV  111 (197)
T ss_pred             HHHcCCCCCeEEEe---cCCEEEEEEcCCCCc
Confidence            85  3456666655   457899999976533

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=90.17  E-value=0.91  Score=40.32  Aligned_cols=70  Identities=21%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCC--cceEEEEEEcCC-eEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN--IAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      ..||+|..+.||+.   .|..+++|.......   .....+|.+++..+..-.  +.+.++++..++ ..+|||+++|.
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFD---KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCCC---HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence            46899999999984   244577888765432   234678999998886433  466777776554 67899999985

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=89.87  E-value=2  Score=37.00  Aligned_cols=62  Identities=19%  Similarity=0.209  Sum_probs=39.7

Q ss_pred             EEEEEEEcCCcEEEEEEecCCCc-------------------------hhHHHHHHHHHHHHHhCCCC--CcceEEEEEE
Q 048684          111 EVYKGQLEDGQFVAIKRLTRGSP-------------------------EEMTTDYLSELGIIVHVDHP--NIAKMIGYGV  163 (363)
Q Consensus       111 ~Vy~~~~~~g~~vAvK~~~~~~~-------------------------~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~  163 (363)
                      .||.|...+|..+|||.......                         .-......+|.+.|.++..-  ++.+++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            48999988899999998642210                         01123356899999999755  566666553 


Q ss_pred             cCCeEEEEEccC
Q 048684          164 EGGMHLILELSP  175 (363)
Q Consensus       164 ~~~~~lv~E~~~  175 (363)
                        ...|||||+.
T Consensus        80 --~~~ivME~I~   89 (188)
T PF01163_consen   80 --RNVIVMEYIG   89 (188)
T ss_dssp             --TTEEEEE--E
T ss_pred             --CCEEEEEecC
Confidence              3579999998

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=88.38  E-value=2.1  Score=38.12  Aligned_cols=74  Identities=22%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             ccccCc-eEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEccCCCChh
Q 048684          104 IGQGGY-AEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILELSPHGSLA  180 (363)
Q Consensus       104 lG~G~f-g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~~~~gsL~  180 (363)
                      |-.|.+ ..||+.... +..+.||......    ...+.+|+.++..+. +--+.+++++...++ .++|||+++|.+|.
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            344444 789999765 4678888875432    235667898888874 444557777766544 68999999998776


Q ss_pred             hh
Q 048684          181 SL  182 (363)
Q Consensus       181 ~~  182 (363)
                      ..
T Consensus        81 ~~   82 (244)
T cd05150          81 AL   82 (244)
T ss_pred             Hh
Confidence            43

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=88.15  E-value=2.2  Score=36.80  Aligned_cols=84  Identities=17%  Similarity=0.176  Sum_probs=56.4

Q ss_pred             cCCcccccCceEEEEEEEcCCcEEEEEEe-cCCC----ch--hHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCCeEEEE
Q 048684          100 HENLIGQGGYAEVYKGQLEDGQFVAIKRL-TRGS----PE--EMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLIL  171 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~-~~~~----~~--~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~~lv~  171 (363)
                      ...+|-+|+=+.|+++.+. |+.+.||.= .+..    .+  =..++..+|++.|.++.--.|.--.= ++....-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            5578899999999999985 888778753 2211    11  12456789999999986444433333 33334478999


Q ss_pred             EccCC-CChhhhhh
Q 048684          172 ELSPH-GSLASLLY  184 (363)
Q Consensus       172 E~~~~-gsL~~~l~  184 (363)
                      ||++| -++.+++.
T Consensus        90 E~~~g~~~vk~~i~  103 (229)
T KOG3087|consen   90 EFIDGASTVKDFIL  103 (229)
T ss_pred             EeccchhHHHHHHH
Confidence            99986 36667665

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=86.99  E-value=0.4  Score=51.60  Aligned_cols=143  Identities=22%  Similarity=0.218  Sum_probs=85.8

Q ss_pred             HHHHHHHHhCCCCCcceEEEEEEcCC-----eEEEEEccCCCChhhhhhhcc----------------------------
Q 048684          141 LSELGIIVHVDHPNIAKMIGYGVEGG-----MHLILELSPHGSLASLLYAKW----------------------------  187 (363)
Q Consensus       141 ~~E~~~l~~l~H~niv~l~~~~~~~~-----~~lv~E~~~~gsL~~~l~~~~----------------------------  187 (363)
                      .-|+..+.++.|+|++.++.|..+..     ..+..++|..-++...+....                            
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~  309 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEH  309 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence            35666778889999999999887643     223458888777766653100                            


Q ss_pred             --CCC----------CceeEEEe----------------ecccccCCCCchhhccCCCCc--cceEEechhHHHHHHhCC
Q 048684          188 --LPD----------KWTHHIVS----------------KIEGTFGYLPPEFFMHGIADE--KTDVYAYGVLLLEIITGR  237 (363)
Q Consensus       188 --~~~----------~~~~~~~~----------------~~~gt~~y~aPE~~~~~~~~~--~sDvwS~Gvvl~elltG~  237 (363)
                        +..          .....+.-                ...-+..|.+||......++.  ..|+|.+|..+..+..|.
T Consensus       310 v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~  389 (1351)
T KOG1035|consen  310 VVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGE  389 (1351)
T ss_pred             eEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcC
Confidence              000          00000000                000123356666665555544  479999999999999887


Q ss_pred             CCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          238 QALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       238 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+-.-...       .....+    .....    .+......|+..++.+|+++.+++.+.
T Consensus       390 ~i~~~~~~-------~~~~l~----~~~~~----~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  390 DISEKSAV-------PVSLLD----VLSTS----ELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             cccccccc-------hhhhhc----cccch----hhhhhhhhhcchhhhhccchhhhhhch
Confidence            65321110       011111    11111    366778899999999999999999754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=86.65  E-value=4  Score=35.15  Aligned_cols=84  Identities=20%  Similarity=0.205  Sum_probs=55.3

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEe-cCCC-chh-----HHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRL-TRGS-PEE-----MTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~-~~~~-~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ..+++|+=+.+|.+.+. |..+++|.= .+.- .++     ...+-.+|+.+++++.--.|..-+=|..+++ ..|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            46889999999999875 445666643 2221 111     1234678999999986555543333444443 6799999


Q ss_pred             cCCCChhhhhhhc
Q 048684          174 SPHGSLASLLYAK  186 (363)
Q Consensus       174 ~~~gsL~~~l~~~  186 (363)
                      .+|..|.+++...
T Consensus        81 I~G~~lkd~l~~~   93 (204)
T COG3642          81 IEGELLKDALEEA   93 (204)
T ss_pred             eCChhHHHHHHhc
Confidence            9998888777643

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=85.74  E-value=4.9  Score=34.96  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=50.4

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCC---------------chhHHHHHHHHHHHHHhCC------CCCcceEE
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS---------------PEEMTTDYLSELGIIVHVD------HPNIAKMI  159 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------H~niv~l~  159 (363)
                      ...||+|+.=.||.--  +.....||++....               .....+.+.+|+.-...+.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~HP--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEECC--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            4679999999998643  34446788886554               1112355666776655554      88999999


Q ss_pred             EEEEcCC-eEEEEEccC
Q 048684          160 GYGVEGG-MHLILELSP  175 (363)
Q Consensus       160 ~~~~~~~-~~lv~E~~~  175 (363)
                      |+...+. ..+|+|.+.
T Consensus        84 G~veT~~G~Glv~e~I~  100 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIR  100 (199)
T ss_pred             EEEecCCceEEEEEEEE
Confidence            9887654 788888764

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=82.62  E-value=3.7  Score=39.18  Aligned_cols=79  Identities=14%  Similarity=0.169  Sum_probs=48.9

Q ss_pred             cccccCceEEEEEEEcCC-cEEEEEEec----C---CCchhHHHHHHHHHHHHHhCC--CCC-cceEEEEEEcCCeEEEE
Q 048684          103 LIGQGGYAEVYKGQLEDG-QFVAIKRLT----R---GSPEEMTTDYLSELGIIVHVD--HPN-IAKMIGYGVEGGMHLIL  171 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~~~~g-~~vAvK~~~----~---~~~~~~~~~~~~E~~~l~~l~--H~n-iv~l~~~~~~~~~~lv~  171 (363)
                      .||.|....||++...+| +.|+||.-.    .   ...- ...+..-|...|....  -|. +.++|.| ......+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl-~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPL-TLDRARIESSALIRQGEHVPHLVPRIFHF-DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCC-CccHHHHHHHHHHHhhccCccccCeEEEE-ccccceehH
Confidence            589999999999997654 589999742    1   1111 1344456777776653  354 4445444 344466999


Q ss_pred             EccCCCC-hhhhh
Q 048684          172 ELSPHGS-LASLL  183 (363)
Q Consensus       172 E~~~~gs-L~~~l  183 (363)
                      |+++... |...|
T Consensus        80 EdL~~~~ilR~~L   92 (370)
T TIGR01767        80 EDLSHHKIARKGL   92 (370)
T ss_pred             hhCccchHHHHHH
Confidence            9996532 33444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=80.10  E-value=5.6  Score=35.06  Aligned_cols=74  Identities=18%  Similarity=0.082  Sum_probs=48.2

Q ss_pred             CcccccCceEEEEEEEcC--CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCeEEEEEccCCCC
Q 048684          102 NLIGQGGYAEVYKGQLED--GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH-PNIAKMIGYGVEGGMHLILELSPHGS  178 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~--g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~lv~E~~~~gs  178 (363)
                      +.|..|-...+|+....+  +..|++|........  .-...+|+.++..+.. .-..+++++..   -.+||||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--~~d~~~E~~~~~~l~~~gl~P~v~~~~~---~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--IIDRERELRIHKLLSKHGLAPKLYATFQ---NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--eecHHHHHHHHHHHHhCCCCCeEEEEeC---CcEEEEeeCCCc
Confidence            457788889999998654  567889976543211  1122468888888853 33445555432   247999999866


Q ss_pred             hh
Q 048684          179 LA  180 (363)
Q Consensus       179 L~  180 (363)
                      +.
T Consensus        79 l~   80 (235)
T cd05157          79 LE   80 (235)
T ss_pred             CC
Confidence            54

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	363
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-27
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-26
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-15
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-15
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-14
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		6e-14
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		6e-13
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-09
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		7e-09
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		7e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-07
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		7e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		8e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		8e-07
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		9e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-07
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-07
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-06
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-06
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-06
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-06
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		4e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		4e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-06
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-05
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		5e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		6e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		6e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		6e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		7e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		7e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		7e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		7e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		7e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		8e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		8e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		8e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		8e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		8e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		9e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		6e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		6e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		6e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		7e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		7e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		8e-04
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		8e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		8e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 76/314 (24%)
Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
           K F+L ELQ A+DNFS++N++G+GG+ +VYKG+L DG  VA+KRL     +     + +E
Sbjct: 26  KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLYAK---------------- 186
           + +I    H N+ ++ G+ +     L++     +GS+AS L  +                
Sbjct: 86  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 187 --------WLPDKWTHHIVSK---------------IEGTFG------------------ 205
                   +L D     I+ +               + G FG                  
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 206 ---YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-------------KSLVM 249
              ++ PE+   G + EKTDV+ YGV+LLE+ITG++A D ++             K L+ 
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQII 309
              ++ LVD  L   Y  E++ +L+ +A  C   +   RP+MS+VV+ L GD   LA+  
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD--GLAERW 323
Query: 310 EENQSLRRLQRTFS 323
           EE Q     ++ F+
Sbjct: 324 EEWQKEEMFRQDFN 337

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 76/305 (24%)
Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE 143
           K F+L ELQ A+DNF ++N++G+GG+ +VYKG+L DG  VA+KRL     +     + +E
Sbjct: 18  KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 144 LGIIVHVDHPNIAKMIGYGVEGGMHLIL-ELSPHGSLASLLYAK---------------- 186
           + +I    H N+ ++ G+ +     L++     +GS+AS L  +                
Sbjct: 78  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 187 --------WLPDKWTHHIVSK---------------IEGTFG------------------ 205
                   +L D     I+ +               + G FG                  
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 206 ---YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ-------------KSLVM 249
              ++ PE+   G + EKTDV+ YGV+LLE+ITG++A D ++             K L+ 
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQII 309
              ++ LVD  L   Y  E++ +L+ +A  C   +   RP+MS+VV+ L GD   LA+  
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD--GLAERW 315
Query: 310 EENQS 314
           EE Q 
Sbjct: 316 EEWQK 320

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 71/281 (25%)
Query: 88  LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
           L +L+ AT+NF H+ LIG G + +VYKG L DG  VA+KR T  S + +          +
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE-TL 89
Query: 148 VHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD---KW----------- 192
               HP++  +IG+  E   M LI +   +G+L   LY   LP     W           
Sbjct: 90  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 -------THHIVSKIEGTFGYLPPEFFMHGIAD--------------------------- 218
                  T  I+ +   +   L  E F+  I D                           
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 219 ----------EKTDVYAYGVLLLEIITGR----QALDSSQKSLVMWS-------SMKELV 257
                     EK+DVY++GV+L E++  R    Q+L     +L  W+        ++++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
           DP L D    E L +    A  C+  +S  RP M  V+  L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 71/281 (25%)
Query: 88  LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
           L +L+ AT+NF H+ LIG G + +VYKG L DG  VA+KR T  S + +          +
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE-TL 89
Query: 148 VHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD---KW----------- 192
               HP++  +IG+  E   M LI +   +G+L   LY   LP     W           
Sbjct: 90  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 -------THHIVSKIEGTFGYLPPEFFMHGIAD--------------------------- 218
                  T  I+ +   +   L  E F+  I D                           
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 219 ----------EKTDVYAYGVLLLEIITGR----QALDSSQKSLVMWS-------SMKELV 257
                     EK+DVY++GV+L E++  R    Q+L     +L  W+        ++++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
           DP L D    E L +    A  C+  +S  RP M  V+  L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 80/294 (27%)
Query: 83  WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
           + +F+  EL+  T+NF         N +G+GG+  VYKG + +   VA+K+L      + 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
           EE+   +  E+ ++    H N+ +++G+  +G  + L+    P+GSL   L       P 
Sbjct: 71  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 191 KW-------------------THHI----------------------------------- 196
            W                    HHI                                   
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
             S+I GT  Y+ PE  + G    K+D+Y++GV+LLEIITG  A+D  ++  ++      
Sbjct: 191 MXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
                 ++++ +D  + DA +T  +  +  +AS C+++    RP + KV Q L+
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 80/294 (27%)
Query: 83  WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
           + +F+  EL+  T+NF         N +G+GG+  VYKG + +   VA+K+L      + 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 70
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
           EE+   +  E+ ++    H N+ +++G+  +G  + L+    P+GSL   L       P 
Sbjct: 71  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 191 KW-------------------THHI----------------------------------- 196
            W                    HHI                                   
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
              +I GT  Y+ PE  + G    K+D+Y++GV+LLEIITG  A+D  ++  ++      
Sbjct: 191 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
                 ++++ +D  + DA +T  +  +  +AS C+++    RP + KV Q L+
Sbjct: 250 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 125/294 (42%), Gaps = 80/294 (27%)
Query: 83  WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
           + +F+  EL+  T+NF         N +G+GG+  VYKG + +   VA+K+L      + 
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 64
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
           EE+   +  E+ ++    H N+ +++G+  +G  + L+    P+GSL   L       P 
Sbjct: 65  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 191 KW-------------------THHI----------------------------------- 196
            W                    HHI                                   
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
              +I GT  Y+ PE  + G    K+D+Y++GV+LLEIITG  A+D  ++  ++      
Sbjct: 185 MXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
                 ++++ +D  + DA +T  +  +  +AS C+++    RP + KV Q L+
Sbjct: 244 IEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 80/294 (27%)
Query: 83  WKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRG---SP 133
           + +F+  EL+  T+NF         N  G+GG+  VYKG + +   VA+K+L      + 
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITT 61
Query: 134 EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPD 190
           EE+   +  E+ +     H N+ +++G+  +G  + L+    P+GSL   L       P 
Sbjct: 62  EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 191 KW-------------------THHI----------------------------------- 196
            W                    HHI                                   
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW----- 250
             S+I GT  Y  PE  + G    K+D+Y++GV+LLEIITG  A+D  ++  ++      
Sbjct: 182 XXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 251 -----SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
                 ++++ +D    DA +T  +     +AS C+++    RP + KV Q L+
Sbjct: 241 IEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82  GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
           G   F  S L    DN   +E  IG+GG+  V+KG+L +D   VAIK L  G  E     
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
            E   ++  E+ I+ +++HPNI K+ G  +     +++E  P G L   L  K  P KW+
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82  GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
           G   F  S L    DN   +E  IG+GG+  V+KG+L +D   VAIK L  G  E     
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
            E   ++  E+ I+ +++HPNI K+ G  +     +++E  P G L   L  K  P KW+
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 82  GWKNFALSELQAATDN-FSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----- 134
           G   F  S L    DN   +E  IG+GG+  V+KG+L +D   VAIK L  G  E     
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 135 -EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWT 193
            E   ++  E+ I+ +++HPNI K+ G  +     +++E  P G L   L  K  P KW+
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
           KN    + Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++  
Sbjct: 13  KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 72
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
             E+ I  H+ HPNI ++ GY  +   ++LILE +P G++                    
Sbjct: 73  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 132
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
                 S  ++K +  +                     W+ H  S     + GT  YLPP
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 192
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
           E     + DEK D+++ GVL  E + G+   +++
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G +                          S 
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
           KN    + Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++  
Sbjct: 22  KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
             E+ I  H+ HPNI ++ GY  +   ++LILE +P G++                    
Sbjct: 82  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
                 S  ++K +  +                     W+ H  S     + GT  YLPP
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPP 201
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
           E     + DEK D+++ GVL  E + G+   +++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 54/214 (25%)
Query: 84  KNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
           KN    + Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++  
Sbjct: 22  KNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------- 180
             E+ I  H+ HPNI ++ GY  +   ++LILE +P G++                    
Sbjct: 82  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 141
Query: 181 ------SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPP 209
                 S  ++K +  +                     W+ H  S     + GT  YLPP
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPP 201
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
           E     + DEK D+++ GVL  E + G+   +++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 54/211 (25%)
Query: 87  ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSE 143
           A+   Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E
Sbjct: 2   AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 144 LGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA---------------------- 180
           + I  H+ HPNI ++ GY  +   ++LILE +P G++                       
Sbjct: 62  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 181 ---SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFF 212
              S  ++K +  +                     W+ H  S     + GT  YLPPE  
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
Query: 213 MHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
              + DEK D+++ GVL  E + G+   +++
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G +                          S 
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 6   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 66  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN 211

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 6   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 66  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN 211

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVS----KIEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S    ++ GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 5   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN 210

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 54/209 (25%)
Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
           S+ Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ 
Sbjct: 5   SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
           I  H+ HPNI ++ GY  +   ++LILE +P G++                         
Sbjct: 65  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
            S  ++K +  +                     W+ H  S     + GT  YLPPE    
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITGRQALDSS 243
            + DEK D+++ GVL  E + G+   +++
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 57/215 (26%)
Query: 85  NFALSEL---QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY 140
           N AL+E+   +   D+F     +G+G +  VY  + +  +F+ A+K L +   E+   ++
Sbjct: 1   NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 141 --LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL-------------ASLLY 184
               E+ I  H+ HPNI +M  Y  +   ++L+LE +P G L              S  +
Sbjct: 61  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 185 AKWLPDK---------------------------------WTHHIVS----KIEGTFGYL 207
            + L D                                  W+ H  S     + GT  YL
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYL 180
Query: 208 PPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDS 242
           PPE       DEK D++  GVL  E + G    DS
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + ++ +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 3   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 63  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEAN 208

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 7   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 54/210 (25%)
Query: 88  LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSEL 144
           L   Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+
Sbjct: 3   LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 145 GIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA----------------------- 180
            I  H+ HPNI ++ GY  +   ++LILE +P G++                        
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 181 --SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFM 213
             S  ++K +  +                     W+ H  S     + GT  YLPPE   
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 214 HGIADEKTDVYAYGVLLLEIITGRQALDSS 243
             + DEK D+++ GVL  E + G+   +++
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 4   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN 209

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 57/213 (26%)
Query: 87  ALSEL---QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY-- 140
           AL+E+   +   D+F     +G+G +  VY  + +  +F+ A+K L +   E+   ++  
Sbjct: 2   ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 141 LSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSL-------------ASLLYAK 186
             E+ I  H+ HPNI +M  Y  +   ++L+LE +P G L              S  + +
Sbjct: 62  RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 187 WLPDK---------------------------------WTHHIVS----KIEGTFGYLPP 209
            L D                                  W+ H  S     + GT  YLPP
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPP 181
Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDS 242
           E       DEK D++  GVL  E + G    DS
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 1   QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 61  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE     + 
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEAN 206

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 54/206 (26%)
Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELGIIV 148
           Q A ++F     +G+G +  VY  + +  +F+ A+K L +   E+   ++    E+ I  
Sbjct: 9   QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 149 HVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA-------------------------SL 182
           H+ HPNI ++ GY  +   ++LILE +P G++                          S 
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 183 LYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMHGIA 217
            ++K +  +                     W+ H  S     + GT  YLPPE       
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 218 DEKTDVYAYGVLLLEIITGRQALDSS 243
           DEK D+++ GVL  E + G+   +++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN 214

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
           +G G + +VYK Q ++   +A  ++     EE   DY+ E+ I+   DHPNI K++  + 
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
            E  + +++E    G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
           +G G + +VYK Q ++   +A  ++     EE   DY+ E+ I+   DHPNI K++  + 
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
            E  + +++E    G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI-GYG 162
           +G G + +VYK Q ++   +A  ++     EE   DY+ E+ I+   DHPNI K++  + 
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 163 VEGGMHLILELSPHGSLASLL 183
            E  + +++E    G++ +++
Sbjct: 105 YENNLWILIEFCAGGAVDAVM 125

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 54/202 (26%)
Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDY--LSELGIIVHVDH 152
           D+F     +G+G +  VY  + +   F VA+K L +   E+   ++    E+ I  H+ H
Sbjct: 23  DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDK-------------------- 191
           PNI ++  Y  +   ++LILE +P G L   L      D+                    
Sbjct: 83  PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 192 --------------------------WTHHIVS----KIEGTFGYLPPEFFMHGIADEKT 221
                                     W+ H  S     + GT  YLPPE     + +EK 
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 222 DVYAYGVLLLEIITGRQALDSS 243
           D++  GVL  E++ G    +S+
Sbjct: 203 DLWCIGVLCYELLVGNPPFESA 224

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G L+  G+   FVAIK L  G  E+   D+LSE  I+   DHPN+ 
Sbjct: 12  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + +I E   +GSL S L
Sbjct: 72  HLEGVVTKSTPVMIITEFMENGSLDSFL 99

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G L+  G+   FVAIK L  G  E+   D+LSE  I+   DHPN+ 
Sbjct: 38  EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + +I E   +GSL S L
Sbjct: 98  HLEGVVTKSTPVMIITEFMENGSLDSFL 125

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YG 162
           +G G + +VYK + ++   +A  ++     EE   DY+ E+ I+   DHP I K++G Y 
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 163 VEGGMHLILELSPHGSLASLL 183
            +G + +++E  P G++ +++
Sbjct: 87  HDGKLWIMIEFCPGGAVDAIM 107

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YG 162
           +G G + +VYK + ++   +A  ++     EE   DY+ E+ I+   DHP I K++G Y 
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 163 VEGGMHLILELSPHGSLASLL 183
            +G + +++E  P G++ +++
Sbjct: 79  HDGKLWIMIEFCPGGAVDAIM 99

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 98  FSHENL-----IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
            +HE+L     IG+G + EV+ G+L  D   VA+K      P ++   +L E  I+    
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 152 HPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
           HPNI ++IG   +   +++++EL   G   + L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 98  FSHENL-----IGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
            +HE+L     IG+G + EV+ G+L  D   VA+K      P ++   +L E  I+    
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 152 HPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
           HPNI ++IG   +   +++++EL   G   + L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 61  GSRGLSFNATLVDAEL-----CYLKPGWKNFALS-ELQAATDNFSHENLIGQGGYAEVYK 114
           G   L F   L + +       Y +PG    + + E++A+  +   E +IG G   EV  
Sbjct: 10  GRENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHI--EKIIGSGDSGEVCY 67
Query: 115 GQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI 170
           G+L   GQ    VAIK L  G  E    D+LSE  I+   DHPNI ++ G    G + +I
Sbjct: 68  GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 171 L-ELSPHGSLASLL 183
           + E   +GSL + L
Sbjct: 128 VTEYMENGSLDTFL 141

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 61  GSRGLSFNATLVDAEL-----CYLKPGWKNFALS-ELQAATDNFSHENLIGQGGYAEVYK 114
           G   L F   L + +       Y +PG    + + E++A+  +   E +IG G   EV  
Sbjct: 10  GRENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHI--EKIIGSGDSGEVCY 67
Query: 115 GQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI 170
           G+L   GQ    VAIK L  G  E    D+LSE  I+   DHPNI ++ G    G + +I
Sbjct: 68  GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 171 L-ELSPHGSLASLL 183
           + E   +GSL + L
Sbjct: 128 VTEYMENGSLDTFL 141

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 32  PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNAT-----LVDAELCYLKPGWKNF 86
           P+K   + +P     + PKL   + + +R S  +S + T     ++D E  Y  P  +++
Sbjct: 332 PQKEGERALP-----SIPKLANNEKQGVR-SHTVSVSETDDYAEIIDEEDTYTMPSTRDY 385
Query: 87  ALSELQAATDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLS 142
            +       +       IG+G + +V++G           VAIK     + + +   +L 
Sbjct: 386 EIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS---- 198
           E   +   DHP+I K+IG   E  + +I+EL   G L S L  +    K++  + S    
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILY 496
Query: 199 --KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLL 230
             ++     YL  + F+H       D+ A  VL+
Sbjct: 497 AYQLSTALAYLESKRFVH------RDIAARNVLV 524

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 32  PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNAT-----LVDAELCYLKPGWKNF 86
           P+K   + +P     + PKL   + + +R S  +S + T     ++D E  Y  P  +++
Sbjct: 332 PQKEGERALP-----SIPKLANNEKQGVR-SHTVSVSETDDYAEIIDEEDTYTMPSTRDY 385
Query: 87  ALSELQAATDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLS 142
            +       +       IG+G + +V++G           VAIK     + + +   +L 
Sbjct: 386 EIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS---- 198
           E   +   DHP+I K+IG   E  + +I+EL   G L S L  +    K++  + S    
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILY 496
Query: 199 --KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLL 230
             ++     YL  + F+H       D+ A  VL+
Sbjct: 497 AYQLSTALAYLESKRFVH------RDIAARNVLV 524

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94  ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
           A ++     ++G+G + EVY+G   + +   I    +   ++ T D    ++SE  I+ +
Sbjct: 6   AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           +DHP+I K+IG   E    +I+EL P+G L   L
Sbjct: 66  LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 99

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94  ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
           A ++     ++G+G + EVY+G   + +   I    +   ++ T D    ++SE  I+ +
Sbjct: 22  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           +DHP+I K+IG   E    +I+EL P+G L   L
Sbjct: 82  LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 115

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 94  ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD----YLSELGIIVH 149
           A ++     ++G+G + EVY+G   + +   I    +   ++ T D    ++SE  I+ +
Sbjct: 10  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           +DHP+I K+IG   E    +I+EL P+G L   L
Sbjct: 70  LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYL 103

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
           S+ Q   ++F     +G+G +  VY  +    +F+ A+K L +   E+   ++    E+ 
Sbjct: 5   SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
           I  H+ HPNI ++ GY  +   ++LILE +P G++                         
Sbjct: 65  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
            S  ++K +  +                     W+ H  S     + GT  YLPPE    
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITG 236
            + DEK D+++ GVL  E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFV-AIKRLTRGSPEEMTTDY--LSELG 145
           S+ Q   ++F     +G+G +  VY  +    +F+ A+K L +   E+   ++    E+ 
Sbjct: 5   SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLA------------------------ 180
           I  H+ HPNI ++ GY  +   ++LILE +P G++                         
Sbjct: 65  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 181 -SLLYAKWLPDK---------------------WTHHIVSK----IEGTFGYLPPEFFMH 214
            S  ++K +  +                     W+ H  S     + GT  YLPPE    
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 215 GIADEKTDVYAYGVLLLEIITG 236
            + DEK D+++ GVL  E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 64/259 (24%)
Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHP 153
           NF  E  IG+G ++EVY+   L DG  VA+K++        +   D + E+ ++  ++HP
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLL-----YAKWLPDK--WTHHI--VSKIE-- 201
           N+ K     +E   ++++LEL+  G L+ ++       + +P++  W + +   S +E  
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 202 ---------------------------------------------GTFGYLPPEFFMHGI 216
                                                        GT  Y+ PE      
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 217 ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRLLL 275
            + K+D+++ G LL E+   +      + +L       E  D P L   + +E+L +L+ 
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV- 271
Query: 276 IASACINQTSACRPQMSKV 294
             + CIN     RP ++ V
Sbjct: 272 --NMCINPDPEKRPDVTYV 288

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 102 NLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
            ++G G +  VYKG  + +G+ V    AIK L   +  +   +++ E  I+  +DHP++ 
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLLY 184
           +++G  +   + L+ +L PHG L   ++
Sbjct: 81  RLLGVCLSPTIQLVTQLMPHGCLLEYVH 108

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 102 NLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
            ++G G +  VYKG  + +G+ V    AIK L   +  +   +++ E  I+  +DHP++ 
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 157 KMIGYGVEGGMHLILELSPHGSLASLLY 184
           +++G  +   + L+ +L PHG L   ++
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVH 131

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 12  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 70  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 12  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 70  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 9   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 68  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 107

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 97  NFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
           N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  I+   DH
Sbjct: 34  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           PNI ++ G   +   + ++ E   +GSL S L
Sbjct: 94  PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 6   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 65  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 104

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 7   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 103

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 7   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 9   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 68  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 107

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 7   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 105

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 8   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 67  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 106

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 39  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 96
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 97  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 90  ELQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELG 145
           EL A   N S + ++G G + EV  G+L+        VAIK L  G  E+   D+L E  
Sbjct: 41  ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 146 IIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I+   DHPNI ++ G   +   + ++ E   +GSL S L
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 6   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 65  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXL 104

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  E+   D+L E  I+   DHPN+ 
Sbjct: 48  ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G    G  + +++E   +G+L + L
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL 135

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 99  SHENLIGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
           + + +IG G + EVYKG L+         VAIK L  G  E+   D+L E GI+    H 
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 154 NIAKMIGY-GVEGGMHLILELSPHGSLASLLYAK 186
           NI ++ G       M +I E   +G+L   L  K
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREK 140

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96  DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   +++IG+G + +V K +++ DG  +  AIKR+   + ++   D+  EL ++  +  
Sbjct: 22  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           HPNI  ++G     G ++L +E +PHG+L   L
Sbjct: 82  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96  DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   +++IG+G + +V K +++ DG  +  AIKR+   + ++   D+  EL ++  +  
Sbjct: 15  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           HPNI  ++G     G ++L +E +PHG+L   L
Sbjct: 75  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 96  DNFSHENLIGQGGYAEVYKGQLE-DGQFV--AIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   +++IG+G + +V K +++ DG  +  AIKR+   + ++   D+  EL ++  +  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           HPNI  ++G     G ++L +E +PHG+L   L
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 15  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 73
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 74  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 113

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV +G+L+        VAIK L  G  E    ++LSE  I+   +HPNI 
Sbjct: 19  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
           ++ G        +IL E   +G+L S L
Sbjct: 79  RLEGVVTNSMPVMILTEFMENGALDSFL 106

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV +G+L+        VAIK L  G  E    ++LSE  I+   +HPNI 
Sbjct: 21  EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 157 KMIGYGVEGGMHLIL-ELSPHGSLASLL 183
           ++ G        +IL E   +G+L S L
Sbjct: 81  RLEGVVTNSMPVMILTEFMENGALDSFL 108

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
           F    ++G G +  VYKG  + +G+ V    AIK L   +  +   + L E  ++  VD+
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 153 PNIAKMIGYGVEGGMHLILELSPHGSL 179
           P++ +++G  +   + LI +L P G L
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCL 97

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 7   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 105

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 8   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 67  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 8   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 67  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 8   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 67  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 106

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 7   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 105

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 12  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 71  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 12  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 71  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 11  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 69
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 70  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 109

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 30  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 88
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 89  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 128

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
           F    ++G G +  VYKG  + +G+ V    AIK L   +  +   + L E  ++  VD+
Sbjct: 14  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 153 PNIAKMIGYGVEGGMHLILELSPHGSL 179
           P++ +++G  +   + LI +L P G L
Sbjct: 74  PHVCRLLGICLTSTVQLITQLMPFGCL 100

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G           VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 78  GVITENPVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 134 H------RDIAARNVLV 144

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  ++   D+LSE  I+   DHPNI 
Sbjct: 34  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + +I E   +GSL + L
Sbjct: 94  HLEGVVTKCKPVMIITEYMENGSLDAFL 121

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXL 103

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G           VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 78  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 134 H------RDIAARNVLV 144

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  ++   D+LSE  I+   DHPNI 
Sbjct: 19  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + +I E   +GSL + L
Sbjct: 79  HLEGVVTKCKPVMIITEYMENGSLDAFL 106

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 104 IGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G           VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAK 186
           G   E  + +I+EL   G L S L  +
Sbjct: 78  GVITENPVWIIMELCTLGELRSFLQVR 104

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  ++   D+LSE  I+   DHPNI 
Sbjct: 13  EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + +I E   +GSL + L
Sbjct: 73  HLEGVVTKCKPVMIITEYMENGSLDAFL 100

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 80  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 135
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 136 H------RDIAARNVLV 146

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 78  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 134 H------RDIAARNVLV 144

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 75  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 130
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 131 H------RDIAARNVLV 141

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 96  DNFSHENLIGQGGYAEVYKGQ------LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           +N  +   IG+G +  V++ +       E    VA+K L   +  +M  D+  E  ++  
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
            D+PNI K++G    G  M L+ E   +G L   L
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 81  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 136
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 137 H------RDIAARNVLV 147

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 161
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 162 H------RDIAARNVLV 172

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 104 IGQGGYAEVYKGQLEDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           IG+G + +V++G     +     VAIK     + + +   +L E   +   DHP+I K+I
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS------KIEGTFGYLPPEFFM 213
           G   E  + +I+EL   G L S L  +    K++  + S      ++     YL  + F+
Sbjct: 83  GVITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKRFV 138
Query: 214 HGIADEKTDVYAYGVLL 230
           H       D+ A  VL+
Sbjct: 139 H------RDIAARNVLV 149

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++  G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 12  NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI++L P G L
Sbjct: 71  ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCL 110

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++G G +  VYKG  + +G+ V    AI  L   +  +   +
Sbjct: 39  NQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE 97
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 98  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 137

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 101 ENLIGQGGYAEVYKGQLE-DGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G + EV  G+L+  G+    VAIK L  G  E+   D+L E  I+   DHPNI 
Sbjct: 27  ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            + G   +   + ++ E   +GSL + L
Sbjct: 87  HLEGVVTKSKPVMIVTEYMENGSLDTFL 114

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 88  LSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELG 145
           LS L+     F    L+G G Y +VYKG+ ++ GQ  AIK +   G  EE     ++ L 
Sbjct: 16  LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 146 IIVHVDHPNIAKMIGY-------GVEGGMHLILELSPHGSLASLL---YAKWLPDKWTHH 195
              H  H NIA   G        G++  + L++E    GS+  L+       L ++W  +
Sbjct: 76  KYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLE 232
           I  +I     +L     +H       D+    VLL E
Sbjct: 134 ICREILRGLSHLHQHKVIH------RDIKGQNVLLTE 164

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++  G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 5   NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 103

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
           ++G+G Y  VY G+ L +   +AIK +        +     E+ +  H+ H NI + +G 
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 162 GVEGG-MHLILELSPHGSLASLLYAKWLPDK 191
             E G + + +E  P GSL++LL +KW P K
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRSKWGPLK 118

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKG-QLEDGQFV----AIKRLTRGSPEEMTTD 139
           N AL  +   T+ F    ++  G +  VYKG  + +G+ V    AIK L   +  +   +
Sbjct: 12  NQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
            L E  ++  VD+P++ +++G  +   + LI +L P G L
Sbjct: 71  ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 110

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 84  KNFALSEL-QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEM 136
           K  ++S+L +    N +    +G G + EVY+GQ+           VA+K L     E+ 
Sbjct: 18  KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 137 TTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
             D+L E  II  ++H NI + IG  ++     ++LEL   G L S L
Sbjct: 78  ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSEL 144
           N  +++++    NF     + QG Y  + K Q++    VAIK L +G+ +  T + + E 
Sbjct: 10  NLLIADIELGCGNFGS---VRQGVY-RMRKKQID----VAIKVLKQGTEKADTEEMMREA 61
Query: 145 GIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKW--LPDKWTHHIVSKIEG 202
            I+  +D+P I ++IG      + L++E++  G L   L  K   +P      ++ ++  
Sbjct: 62  QIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 203 TFGYLPPEFFMHGIADEKTDVYAYGVLLL 231
              YL  + F+H       D+ A  VLL+
Sbjct: 122 GMKYLEEKNFVH------RDLAARNVLLV 144

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFL 151

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II  ++H NI +
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFL 131

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD--SSQKSLVMWSSMKELVD 258
           +G+  ++ PE F      EK DV+++G++L E+IT R+  D        +MW+       
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223
Query: 259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
           P +    N  +    L+  + C ++  + RP M ++V+ +
Sbjct: 224 PLIK---NLPKPIESLM--TRCWSKDPSQRPSMEEIVKIM 258

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
           ++G+G Y  VY G+ L +   +AIK +        +     E+ +  H+ H NI + +G 
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-RDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 162 GVEGG-MHLILELSPHGSLASLLYAKWLPDK 191
             E G + + +E  P GSL++LL +KW P K
Sbjct: 74  FSENGFIKIFMEQVPGGSLSALLRSKWGPLK 104

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFL 141

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFL 124

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD--SSQKSLVMWSSMKELVD 258
           +G+  ++ PE F      EK DV+++G++L E+IT R+  D        +MW+       
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 224
Query: 259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
           P +    N  +    L+  + C ++  + RP M ++V+ +
Sbjct: 225 PLIK---NLPKPIESLM--TRCWSKDPSQRPSMEEIVKIM 259

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 158 MIGYGVEGGMHLIL-ELSPHGSLASLL 183
            IG  ++     IL EL   G L S L
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFL 124

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFL 165

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 158 MIGYGVEG-GMHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFL 142

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 84  KNFALSEL-QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEM 136
           K  ++S+L +    N +    +G G + EVY+GQ+           VA+K L     E+ 
Sbjct: 9   KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 137 TTDYLSELGIIVHVDHPNIAKMIGYGVEG-GMHLILELSPHGSLASLL 183
             D+L E  II   +H NI + IG  ++     ++LEL   G L S L
Sbjct: 69  ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 87  ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           A SE     DN     LIG+G Y  VYKG L D + VA+K  +  + +    ++++E  I
Sbjct: 4   AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ----NFINEKNI 58
Query: 147 --IVHVDHPNIAKMI----GYGVEGGMH--LILELSPHGSLA---SLLYAKWLPDKWTHH 195
             +  ++H NIA+ I        +G M   L++E  P+GSL    SL  + W+      H
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH 118
Query: 196 IVSK 199
            V++
Sbjct: 119 SVTR 122

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 104 IGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 158 MIGYGVEGGMHLIL-ELSPHGSLASLL 183
            IG  ++     IL EL   G L S L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFL 139

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 87  ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELG 145
           +L + +    + + ++ +G G Y EVY+G  +     VA+K L   + E    ++L E  
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAA 59
Query: 146 IIVHVDHPNIAKMIGYGV-EGGMHLILELSPHGSLASLL 183
           ++  + HPN+ +++G    E   ++I+E   +G+L   L
Sbjct: 60  VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-58
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-41
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-34
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-27
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-18
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-18
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-17
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-12
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-11
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-10
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-10
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	6e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	7e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	7e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	8e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  190 bits (484), Expect = 3e-58
 Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 82/299 (27%)

Query: 84  KNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMT 137
            +F+  EL+  T+NF         N +G+GG+  VYKG + +   VA+K+L         
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71

Query: 138 ---TDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLIL--ELSPHGSLAS----------- 181
                +  E+ ++    H N+ +++G+  +G   L L     P+GSL             
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGD-DLCLVYVYMPNGSLLDRLSCLDGTPPL 130

Query: 182 ---------------LLY-------------------------------AKWLPDKWTHH 195
                          + +                               A+         
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190

Query: 196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ--KSLVMWS-- 251
           + S+I GT  Y+ PE  + G    K+D+Y++GV+LLEIITG  A+D  +  + L+     
Sbjct: 191 MTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249

Query: 252 ------SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEA 304
                 ++++ +D  + D  ++  +  +  +AS C+++    RP + KV Q L+    +
Sbjct: 250 IEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  145 bits (369), Expect = 5e-41
 Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 16/149 (10%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ 244
           AK +  K TH + + + GT G++ PE+   G + EKTDV+ YGV+LLE+ITG++A D ++
Sbjct: 181 AKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239

Query: 245 ------KSLVMW-------SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQM 291
                   L+ W         ++ LVD  L   Y  E++ +L+ +A  C   +   RP+M
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299

Query: 292 SKVVQALRGDEEALAQIIEENQSLRRLQR 320
           S+VV+ L GD   LA+  EE Q     ++
Sbjct: 300 SEVVRMLEGD--GLAERWEEWQKEEMFRQ 326

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  114 bits (288), Expect = 2e-29
 Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%)

Query: 83  WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLS 142
            K F+L ELQ A+DNFS++N++G+GG+ +VYKG+L DG  VA+KRL     +     + +
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76

Query: 143 ELGIIVHVDHPNIAKMIGYGVEGGMHLIL--ELSPHGSLASLLYAK 186
           E+ +I    H N+ ++ G+ +      +L      +GS+AS L  +
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPT-ERLLVYPYMANGSVASCLRER 121

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  126 bits (320), Expect = 5e-34
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 16/139 (11%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS- 243
           +K   +    H+ + ++GT GY+ PE+F+ G   EK+DVY++GV+L E++  R A+  S 
Sbjct: 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245

Query: 244 ---QKSLVMW-------SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSK 293
                +L  W         ++++VDP L D    E L +    A  C+  +S  RP M  
Sbjct: 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGD 305

Query: 294 VVQALRGDEEALAQIIEEN 312
           V+  L   E AL   ++E+
Sbjct: 306 VLWKL---EYALR--LQES 319

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  108 bits (273), Expect = 2e-27
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS----PEEMTTDYL 141
             L +L+ AT+NF H+ LIG G + +VYKG L DG  VA+KR T  S     E     + 
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE-----FE 83

Query: 142 SELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLP 189
           +E+  +    HP++  +IG+  E   M LI +   +G+L   LY   LP
Sbjct: 84  TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 91.2 bits (227), Expect = 4e-21
 Identities = 51/273 (18%), Positives = 93/273 (34%), Gaps = 75/273 (27%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL------TRGSPEEMTTDYLSELGIIV 148
           +   +E  IG+GG+  V+KG+ ++D   VAIK L            E   ++  E+ I+ 
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 149 HVDHPNIAKMIGYGVEGGMHLILELSPHGSLAS--------------------------- 181
           +++HPNI K+ G  +     +++E  P G L                             
Sbjct: 79  NLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137

Query: 182 ------------------LLYAKWLPDKWTHHI----VSKIE--------GTFGYLPPEF 211
                              L +          +    +S+          G F ++ PE 
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPET 197

Query: 212 FM--HGIADEKTDVYAYGVLLLEIITGRQ---ALDSSQKSLVMWSSMKELVDPTLGDAYN 266
                    EK D Y++ ++L  I+TG          +   +     + L  PT+ +   
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR-PTIPEDCP 256

Query: 267 TEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
             +L  ++     C +     RP  S +V+ L 
Sbjct: 257 -PRLRNVI---ELCWSGDPKKRPHFSYIVKELS 285

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 47/266 (17%), Positives = 90/266 (33%), Gaps = 75/266 (28%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMT---TDYLSELGIIVHVDHPNIAK 157
           E +IG GG+ +VY+     G  VA+K       E+++    +   E  +   + HPNI  
Sbjct: 12  EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 158 MIGYGVEGG-MHLILELSPHGSLAS----------------------------------- 181
           + G  ++   + L++E +  G L                                     
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130

Query: 182 --------LLYAKWLPDKWTHHIVSKI-----------------EGTFGYLPPEFFMHGI 216
                   +L  + + +    + + KI                  G + ++ PE     +
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM 190

Query: 217 ADEKTDVYAYGVLLLEIITGRQ---ALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL 273
             + +DV++YGVLL E++TG      +D      V +      +   +      E   +L
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---VAYGVAMNKLALPIPSTCP-EPFAKL 246

Query: 274 LLIASACINQTSACRPQMSKVVQALR 299
           +     C N     RP  + ++  L 
Sbjct: 247 ME---DCWNPDPHSRPSFTNILDQLT 269

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 83.0 bits (205), Expect = 6e-18
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 13/119 (10%)

Query: 86  FALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG 145
            A SE     DN     LIG+G Y  VYKG L D + VA+K  +  + +     +++E  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN----FINEKN 57

Query: 146 I--IVHVDHPNIAKMIGYGVEGGMH------LILELSPHGSLASLLYAKWLPDKWTHHI 196
           I  +  ++H NIA+ I               L++E  P+GSL   L         +  +
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL 116

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 81.5 bits (202), Expect = 6e-18
 Identities = 43/260 (16%), Positives = 85/260 (32%), Gaps = 69/260 (26%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMI 159
              + +    E++KG+   G  + +K L         + D+  E   +    HPN+  ++
Sbjct: 15  LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 160 GY---GVEGGMHLILELSPHGSLASLLYA------------KW----------------- 187
           G           LI    P+GSL ++L+             K+                 
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPL 133

Query: 188 ------------LPDKWTHHI----VSKIE------GTFGYLPPEFFMH---GIADEKTD 222
                       + +  T  I    V              ++ PE              D
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193

Query: 223 VYAYGVLLLEIITGRQ---ALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
           ++++ VLL E++T       L + +   +      E + PT+    +   +++L+     
Sbjct: 194 MWSFAVLLWELVTREVPFADLSNME---IGMKVALEGLRPTIPPGIS-PHVSKLM---KI 246

Query: 280 CINQTSACRPQMSKVVQALR 299
           C+N+  A RP+   +V  L 
Sbjct: 247 CMNEDPAKRPKFDMIVPILE 266

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 82.1 bits (203), Expect = 8e-18
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSEL 144
           +     L   +       +  +G +  V+K QL   ++VA+K       +    +   E+
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNE--YEV 69

Query: 145 GIIVHVDHPNIAKMIGYGVEGGMH-----LILELSPHGSLASLLYAKWLP 189
             +  + H NI + IG    G        LI      GSL+  L A  + 
Sbjct: 70  YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS 119

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 22/136 (16%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGI-----ADEKTDVYAYGVLLLEIITGRQA 239
           A       +        GT  Y+ PE     I     A  + D+YA G++L E+ +   A
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237

Query: 240 LDSSQKSLVMW-----------SSMKELV-----DPTLGDAYNTEQLTRLLL-IASACIN 282
            D      ++              M+E+V      P L D +       +L      C +
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297

Query: 283 QTSACRPQMSKVVQAL 298
             +  R     V + +
Sbjct: 298 HDAEARLSAGCVGERI 313

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 44/283 (15%), Positives = 86/283 (30%), Gaps = 81/283 (28%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMI 159
             LIG+G + +VY G+   G+ VAI+ +      E+    +  E+       H N+   +
Sbjct: 38  GELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 160 GYGVEGG-MHLILELSPHGSLASLLYA-----------KW-------------------- 187
           G  +    + +I  L    +L S++             +                     
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD 155

Query: 188 ------LPDKWTHHI----VSKIEG----------------TFGYLPPEFFMHGIA---- 217
                   D     I    +  I G                   +L PE           
Sbjct: 156 LKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215

Query: 218 -----DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR 272
                 + +DV+A G +  E+        +     ++W     +  P L      ++++ 
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM-KPNLSQIGMGKEISD 274

Query: 273 LLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSL 315
           +LL    C       RP  +K++  L        ++ + N+ L
Sbjct: 275 ILL---FCWAFEQEERPTFTKLMDMLE-------KLPKRNRRL 307

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 15/179 (8%)

Query: 14  RIRIKKRLLEKIKISLKVPRKSAPKNIPKSVTKNAPKLTRRKTKR---IRGSRGLSFNAT 70
                 R    +   + VPR S   +   S+ + +  L ++        +G+  +  + +
Sbjct: 10  HHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLS 69

Query: 71  LVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDG----QFVAIK 126
            ++ EL              +  ++       +IG+G +  VY G L D        A+K
Sbjct: 70  ALNPELVQAVQHV------VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK 123

Query: 127 RLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG--YGVEGGMHLILELSPHGSLASLL 183
            L R +     + +L+E  I+    HPN+  ++G     EG   ++L    HG L + +
Sbjct: 124 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHV 150
             F    ++G G +  VYKG            VAIK L   +  +   + L E  ++  V
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 151 DHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           D+P++ +++G  +   + LI +L P G L   +
Sbjct: 75  DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 68.4 bits (168), Expect = 3e-13
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 101 ENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
             +IG+G +  VY G L D        A+K L R +     + +L+E  I+    HPN+ 
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 157 KMIG--YGVEGGMHLILELSPHGSLASLL 183
            ++G     EG   ++L    HG L + +
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 68.1 bits (167), Expect = 4e-13
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            +  H  ++G+G + +  K    E G+ + +K L R   EE    +L E+ ++  ++HPN
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPN 68

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           + K IG   +   ++ I E    G+L  ++
Sbjct: 69  VLKFIGVLYKDKRLNFITEYIKGGTLRGII 98

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQA----LDSSQKSLVMWSSMKELV 257
           G   ++ PE       DEK DV+++G++L EII    A    L  +    +      +  
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243

Query: 258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRR 317
            P                I   C +     RP   K+   L      LA  +     L +
Sbjct: 244 CPPNCPP-------SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQ 296

Query: 318 LQRTFSEEF 326
           L R F E +
Sbjct: 297 LDRGFWETY 305

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 68.7 bits (168), Expect = 8e-13
 Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 9/168 (5%)

Query: 20  RLLEKIKISLKVPRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYL 79
           RL+     S  +  +   +    S+ K A    +               A ++D E  Y 
Sbjct: 319 RLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYT 378

Query: 80  KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGSPEE 135
            P  +++   E+Q   +       IG+G + +V++G           VAIK     + + 
Sbjct: 379 MPSTRDY---EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS 433

Query: 136 MTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           +   +L E   +   DHP+I K+IG   E  + +I+EL   G L S L
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFL 481

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)

Query: 98  FSHENL-----IGQGGYAEVYKGQLEDG------QFVAIKRLTRGSPEEMTTDYLSELGI 146
           +   N+     IG+G +  V++ +            VA+K L   +  +M  D+  E  +
Sbjct: 44  YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103

Query: 147 IVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           +   D+PNI K++G    G  M L+ E   +G L   L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMI 159
           +  IG G +  V++ +   G  VA+K L       E   ++L E+ I+  + HPNI   +
Sbjct: 42  KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100

Query: 160 GYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
           G   +   + ++ E    GSL  LL+     ++        +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ---ALDSSQKSLVMWSSMKELVD 258
           GT  ++ PE      ++EK+DVY++GV+L E+ T +Q    L+ +Q   V+ +   +   
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---VVAAVGFKCKR 257

Query: 259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
             +    N  Q+  ++     C       RP  + ++  LR
Sbjct: 258 LEIPRNLN-PQVAAII---EGCWTNEPWKRPSFATIMDLLR 294

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +  +G G +  V +G     +    VAIK L +G+ +  T + + E  I+  +D+P I +
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 158 MIGYGVEGGMHLILELSPHGSLASLL 183
           +IG      + L++E++  G L   L
Sbjct: 401 LIGVCQAEALMLVMEMAGGGPLHKFL 426

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHV 150
             F    ++G G +  VYKG            VAIK L   +  +   + L E  ++  V
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 151 DHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           D+P++ +++G  +   + LI +L P G L   +
Sbjct: 75  DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 107

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQF---VAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIA 156
           +++IG+G + +V K +++        AIKR+   + ++   D+  EL ++  +  HPNI 
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
            ++G     G ++L +E +PHG+L   L
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
                E ++G+G +  V K +    + VAIK++     E     ++ EL  +  V+HPNI
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI---ESESERKAFIVELRQLSRVNHPNI 63

Query: 156 AKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
            K+ G  +   + L++E +  GSL ++L+       +T       
Sbjct: 64  VKLYGACLN-PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 22/173 (12%)

Query: 33  RKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATL----VDAELCYLKPGWKNFAL 88
                   P +V K   ++  R+   +      S N+      +   L           +
Sbjct: 6   HHHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGV 65

Query: 89  SELQAATDN---FSHENL-----IGQGGYAEVYKGQL--------EDGQFVAIKRLTRGS 132
           SE +   D    F  + L     +G+G + +V   +         ++   VA+K L   +
Sbjct: 66  SEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA 125

Query: 133 PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
            E+  +D +SE+ ++  +  H NI  ++G   + G +++I+E +  G+L   L
Sbjct: 126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 66  SFNATLVDAELCYLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQL------ED 119
           S N     A   Y+   W      E+    +  +    +GQG +  VY+G        E 
Sbjct: 3   SVNPEYFSAADVYVPDEW------EVAR--EKITMSRELGQGSFGMVYEGVAKGVVKDEP 54

Query: 120 GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGS 178
              VAIK +   +      ++L+E  ++   +  ++ +++G   +G    +I+EL   G 
Sbjct: 55  ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114

Query: 179 LASLL 183
           L S L
Sbjct: 115 LKSYL 119

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP +W                PE    G+    +DV+++GV+L EI T   Q
Sbjct: 202 LPVRWM--------------SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 13/145 (8%)

Query: 43  SVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDNFSHEN 102
           S  +     +  KT     ++         D E   L    K     E +      +H+ 
Sbjct: 6   SSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD-YEYREEVHWMTHQP 64

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
            +G+G + EV++ +  + G   A+K  RL     EE+     + L        P I  + 
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA--CAGL------SSPRIVPLY 116

Query: 160 GYGVEGG-MHLILELSPHGSLASLL 183
           G   EG  +++ +EL   GSL  L+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI 141

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQ---FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +  +G G +  V +G     +    VAIK L +G+ +  T + + E  I+  +D+P I +
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 158 MIGYGVEGGMHLILELSPHGSLASLL 183
           +IG      + L++E++  G L   L
Sbjct: 75  LIGVCQAEALMLVMEMAGGGPLHKFL 100

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 12/98 (12%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F  +NL     +G+G + +V K              VA+K L   +      D LSE  +
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79

Query: 147 IVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           +  V+HP++ K+ G   + G + LI+E + +GSL   L
Sbjct: 80  LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 65.1 bits (159), Expect = 7e-12
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 104 IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G G + EVY+GQ+           VA+K L     E+   D+L E  II   +H NI +
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLL 183
            IG  ++     ++LEL   G L S L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFL 165

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 64.2 bits (157), Expect = 7e-12
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
           ++G+G Y  VY G  L +   +AIK +              E+ +  H+ H NI + +G 
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLGS 87

Query: 162 GVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
             E G + + +E  P GSL++LL +KW P K     +   
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
            N +    +G G + EVY+GQ+           VA+K L     E+   D+L E  II  
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
            +H NI + IG  ++     +++EL   G L S L
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP KW               PPE FM GI   KTD +++GVLL EI + G  
Sbjct: 207 LPVKWM--------------PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 244

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 101 ENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           + +IG+G +  VY G+  D        AIK L+R +  +    +L E  ++  ++HPN+ 
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 157 KMIG--YGVEGGMHLILELSPHGSLASLL 183
            +IG     EG  H++L    HG L   +
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP KWT                E         K+DV+++GVLL E++T G  
Sbjct: 190 LPVKWT--------------ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 43/195 (22%), Positives = 65/195 (33%), Gaps = 61/195 (31%)

Query: 103 LIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
            IG+G +  VYKG   E    VA   L  R   +     +  E  ++  + HPNI +   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 161 YGV-----EGGMHLILELSPHGSLASLLYA-KWLPDK----WTHHIVS------------ 198
                   +  + L+ EL   G+L + L   K +  K    W   I+             
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPI 152

Query: 199 -------------------KI-----------------EGTFGYLPPEFFMHGIADEKTD 222
                              KI                  GT  ++ PE +     DE  D
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVD 211

Query: 223 VYAYGVLLLEIITGR 237
           VYA+G+ +LE+ T  
Sbjct: 212 VYAFGMCMLEMATSE 226

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 101 ENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
              +G+  + +VYKG L      E  Q VAIK L   +   +  ++  E  +   + HPN
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           +  ++G   +   + +I     HG L   L
Sbjct: 74  VVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP +W                PE  M+G     +D+++YGV+L E+ + G Q
Sbjct: 192 LPIRWM--------------APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 229

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 40/199 (20%), Positives = 66/199 (33%), Gaps = 58/199 (29%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHV-DH 152
            +F   + +G G Y EV+K +  EDG+  A+KR        +     L+E+G    V  H
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLL--YAKWLPD----KWTHHIVS------- 198
           P   ++     EGG ++L  EL    SL      +   LP+     +    +        
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175

Query: 199 ---------------------KI------------------EGTFGYLPPEFFMHGIADE 219
                                K+                  EG   Y+ PE         
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS-YGT 234

Query: 220 KTDVYAYGVLLLEIITGRQ 238
             DV++ G+ +LE+    +
Sbjct: 235 AADVFSLGLTILEVACNME 253

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 8/122 (6%)

Query: 104 IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G+G + +V+  +       +D   VA+K L   S      D+  E  ++  + H +I +
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 107

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGI 216
             G   EG  + ++ E   HG L   L +     K          G  G          +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167

Query: 217 AD 218
           A 
Sbjct: 168 AA 169

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 15/53 (28%)

Query: 187 WLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
            LP +W               PPE  ++     ++DV+++GV+L EI T G+Q
Sbjct: 221 MLPIRWM--------------PPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           ++      IG+G + EV+ G+L  D   VA+K      P ++   +L E  I+    HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           I ++IG   +   +++++EL   G   + L
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 15/55 (27%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
            + +P KWT               PE   +G    ++DV+++G+LL E  + G  
Sbjct: 274 LRQVPVKWT--------------APEALNYGRYSSESDVWSFGILLWETFSLGAS 314

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           + ++G G + EV  G+L    +    VAIK L  G  E+   D+L E  I+   DHPNI 
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
           ++ G   +   + ++ E   +GSL S L
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQF-----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
             ++G G +  V+KG            V IK +   S  +        +  I  +DH +I
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 156 AKMIGYGVEGGMHLILELSPHGSLASLL 183
            +++G      + L+ +  P GSL   +
Sbjct: 78  VRLLGLCPGSSLQLVTQYLPLGSLLDHV 105

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 52/292 (17%), Positives = 108/292 (36%), Gaps = 70/292 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDH 152
           + +     IG+G + +    +  EDG+   IK   ++R S +E   +   E+ ++ ++ H
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE-REESRREVAVLANMKH 82

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK---WLPD----KWTHHIVS------ 198
           PNI +      E G ++++++    G L   + A+      +     W   I        
Sbjct: 83  PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142

Query: 199 ----------------------KIEGTFG--------------------YLPPEFFMHGI 216
                                 ++ G FG                    YL PE   +  
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQL-GDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201

Query: 217 ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI 276
            + K+D++A G +L E+ T + A ++     ++   +     P +   Y +  L  L+  
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP-VSLHY-SYDLRSLV-- 257

Query: 277 ASACINQTSACRPQMSKVVQ----ALRGDEEALAQIIEENQSLRRLQRTFSE 324
            S    +    RP ++ +++    A R ++    Q+I E   L+   +  S+
Sbjct: 258 -SQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQ 308

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 19/114 (16%)

Query: 89  SELQAATDN--FSHENL-----IGQGGYAEVYKGQLEDG----QFVAIKRLTRGSPEEM- 136
            EL+   ++     +       +G+G +  V + QL+        VA+K L         
Sbjct: 9   DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68

Query: 137 TTDYLSELGIIVHVDHPNIAKMIG-------YGVEGGMHLILELSPHGSLASLL 183
             ++L E   +   DHP++AK++G        G      +IL    HG L + L
Sbjct: 69  IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP KW                 E     +    +DV+A+GV + EI+T G+ 
Sbjct: 201 LPVKWL--------------ALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
             ++G+G + EVY+G   + +     VA+K   +    +    ++SE  I+ ++DHP+I 
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76

Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL 183
           K+IG   E    +I+EL P+G L   L
Sbjct: 77  KLIGIIEEEPTWIIMELYPYGELGHYL 103

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 101 ENLIGQGGYAEVYKGQLE-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
              +G+G + +V   + +      G+ VA+K L   S      D   E+ I+ ++ H NI
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85

Query: 156 AKMIGYGVEGG---MHLILELSPHGSLASLL 183
            K  G   E G   + LI+E  P GSL   L
Sbjct: 86  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 101 ENLIGQGGYAEVYKGQLEDG----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
              IG+G + +V++G           VAIK     + + +   +L E   +   DHP+I 
Sbjct: 20  GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79

Query: 157 KMIGYGVEGGMHLILELSPHGSLASLL 183
           K+IG   E  + +I+EL   G L S L
Sbjct: 80  KLIGVITENPVWIIMELCTLGELRSFL 106

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 61.8 bits (151), Expect = 4e-11
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              IG G +  V+ G   +   VAIK +  G+  E   D++ E  +++ + HP + ++  
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQL-- 68

Query: 161 YGV---EGGMHLILELSPHGSLASLL 183
           YGV   +  + L+ E   HG L+  L
Sbjct: 69  YGVCLEQAPICLVTEFMEHGCLSDYL 94

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 101 ENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
           E +IG G   EV  G+L    +    VAIK L  G  E    D+LSE  I+   DHPNI 
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 157 KMIGYGVEGG-MHLILELSPHGSLASLL 183
           ++ G    G    ++ E   +GSL + L
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL 141

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 8/88 (9%)

Query: 104 IGQGGYAEVYKGQLED-----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +G+G + +V     +      G+ VA+K L   +  +  + +  E+ I+  + H +I K 
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98

Query: 159 IGYGVEGG---MHLILELSPHGSLASLL 183
            G   + G   + L++E  P GSL   L
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 101 ENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
           + +IG G + EVYKG L     +    VAIK L  G  E+   D+L E GI+    H NI
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 156 AKMIGYGVEGG-MHLILELSPHGSLASLL 183
            ++ G   +   M +I E   +G+L   L
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL 137

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              IG+G + +V  G    G  VA+K +   +  +    +L+E  ++  + H N+ ++  
Sbjct: 26  LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQL-- 79

Query: 161 YGV----EGGMHLILELSPHGSLASLL 183
            GV    +GG++++ E    GSL   L
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYL 106

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
           E  +GQG + EV+ G       VAIK L  G+       +L E  ++  + H  + ++  
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA 329

Query: 161 YGVEGGMHLILELSPHGSLASLL 183
              E  ++++ E    GSL   L
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFL 352

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
           E  +GQG + EV+ G       VAIK L  G+       +L E  ++  + H  + ++  
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYA 246

Query: 161 YGVEGGMHLILELSPHGSLASLL 183
              E  ++++ E    GSL   L
Sbjct: 247 VVSEEPIYIVTEYMSKGSLLDFL 269

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 14/100 (14%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F  + L     +G+G + +V +            + VA+K L  G+        +SEL I
Sbjct: 24  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83

Query: 147 IVHVD-HPNIAKMIGYGVEGG--MHLILELSPHGSLASLL 183
           ++H+  H N+  ++G   + G  + +I+E    G+L++ L
Sbjct: 84  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              +G+G Y EV++G    G+ VA+K  +    +    +  +EL   V + H NI   I 
Sbjct: 13  LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIA 69

Query: 161 YGVEGG-----MHLILELSPHGSLASLLYAKWLP 189
             +        + LI      GSL   L    L 
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD 103

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 20/120 (16%), Positives = 46/120 (38%), Gaps = 24/120 (20%)

Query: 202 GTFGYLPPEFFMHGI------ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS---- 251
           GT  Y+ PE     I      + ++ D++A+G++L E+     +    +     +     
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238

Query: 252 ------SMKELVD-----PTLGDAYNTEQLTRLL--LIASACINQTSACRPQMSKVVQAL 298
                  M+++V      P + + + ++     L  L+   C  Q  + R    ++ + L
Sbjct: 239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKE-CWYQNPSARLTALRIKKTL 297

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              +G G +  V  G+      VAIK +  GS  E   +++ E  +++++ H  + ++  
Sbjct: 29  LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQL-- 84

Query: 161 YGV---EGGMHLILELSPHGSLASLL 183
           YGV   +  + +I E   +G L + L
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYL 110

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 12/90 (13%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGI--IVHVDHPNIAKM 158
           +  IG+G + EV++G+   G+ VA+K             +  E  I   V + H NI   
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIF----SSREERSWFREAEIYQTVMLRHENILGF 101

Query: 159 IGY-----GVEGGMHLILELSPHGSLASLL 183
           I       G    + L+ +   HGSL   L
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 24/121 (19%)

Query: 202 GTFGYLPPE------FFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE 255
           GT  Y+ PE         H  + ++ D+YA G++  EI          +   + +  +  
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272

Query: 256 LVDPTLGDAY-----------------NTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
             DP++ +                   + E L  +  I   C     A R    ++ + L
Sbjct: 273 S-DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331

Query: 299 R 299
            
Sbjct: 332 S 332

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 18/116 (15%)

Query: 86  FALSELQAATDN---FSHENL-----IGQGGYAEVYKGQL--------EDGQFVAIKRLT 129
             +SE +   D    F  + L     +G+G + +V   +         ++   VA+K L 
Sbjct: 17  AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76

Query: 130 RGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
             + E+  +D +SE+ ++  +  H NI  ++G   + G +++I+E +  G+L   L
Sbjct: 77  DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVH 149
            +      +G G +  V +G+          VA+K L     S  E   D++ E+  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL 183
           +DH N+ ++ G  +   M ++ EL+P GSL   L
Sbjct: 78  LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 111

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 18/113 (15%)

Query: 89  SELQAATDN--FSHENL-----IGQGGYAEVYKGQLEDG----QFVAIKRL-TRGSPEEM 136
            ELQ   ++       L     +G+G +  V +G L+        VA+K +    S +  
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79

Query: 137 TTDYLSELGIIVHVDHPNIAKMIG------YGVEGGMHLILELSPHGSLASLL 183
             ++LSE   +    HPN+ +++G              +IL    +G L + L
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           +P KW                 E     +   K+DV+A+GV + EI T G  
Sbjct: 211 MPVKWI--------------AIESLADRVYTSKSDVWAFGVTMWEIATRGMT 248

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              +G G +  V  G+ +    VA+K +  GS  E   ++  E   ++ + HP + K   
Sbjct: 13  LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKF-- 68

Query: 161 YGV---EGGMHLILELSPHGSLASLL 183
           YGV   E  ++++ E   +G L + L
Sbjct: 69  YGVCSKEYPIYIVTEYISNGCLLNYL 94

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
           E  +G G + EV+         VA+K +  GS       +L+E  ++  + H  + K+  
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHA 250

Query: 161 YGVEGGMHLILELSPHGSLASLL 183
              +  +++I E    GSL   L
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFL 273

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 104 IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
           +G+G + +V+  +       +D   VA+K L   +      D+  E  ++ ++ H +I K
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK-DFQREAELLTNLQHEHIVK 81

Query: 158 MIGYGVEGG-MHLILELSPHGSLASLL 183
             G   +G  + ++ E   HG L   L
Sbjct: 82  FYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 15/53 (28%)

Query: 187 WLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
            LP +W               PPE  M+     ++DV+++GV+L EI T G+Q
Sbjct: 196 MLPIRWM--------------PPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              IG+G Y EV+ G+   G+ VA+K            +  +E+   V + H NI   I 
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIA 98

Query: 161 YGVEGG-----MHLILELSPHGSLASLLYAKWLP 189
             ++G      ++LI +   +GSL   L +  L 
Sbjct: 99  ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLD 132

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 22/120 (18%)

Query: 202 GTFGYLPPE------FFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS---- 251
           GT  Y+PPE         H  +    D+Y++G++L E+     +    ++  + +     
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267

Query: 252 ------SMKELVD-----PTLGDAYNTEQLTRLLL-IASACINQTSACRPQMSKVVQALR 299
                  M+E+V      P+  + +++++  R +  + + C     A R    +V + L 
Sbjct: 268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDH 152
            NF  E  IG+G ++EVY+   L DG  VA+K  ++      +   D + E+ ++  ++H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           PN+ K     +E   ++++LEL+  G L+ ++
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMI 123

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F  ENL     +G G + +V                VA+K L   +        +SEL +
Sbjct: 42  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101

Query: 147 IVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           +  +  H NI  ++G     G ++LI E   +G L + L
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              +G G + EV+ G       VA+K L +GS       +L+E  ++  + H  + ++  
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA 75

Query: 161 YGVEGGMHLILELSPHGSLASLL 183
              +  +++I E   +GSL   L
Sbjct: 76  VVTQEPIYIITEYMENGSLVDFL 98

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F    L     +G G + +V +         +    VA+K L   +        +SEL +
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 147 IVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           + ++ +H NI  ++G    GG   +I E   +G L + L
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYG 162
           IG G +  VYKG+   G  VA+K L   +P  +    + +E+G++    H NI   +GY 
Sbjct: 32  IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89

Query: 163 VEGGMHLILELSPHGSLASLL 183
               + ++ +     SL   L
Sbjct: 90  TAPQLAIVTQWCEGSSLYHHL 110

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 19/106 (17%), Positives = 50/106 (47%), Gaps = 13/106 (12%)

Query: 202 GTFGYLPPEFFMHGIA---DEKTDVYAYGVLLLEIITGRQ---ALDSSQKSLVMWSSMKE 255
           G+  ++ PE      +     ++DVYA+G++L E++TG+     +++  +  ++    + 
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVGRG 241

Query: 256 LVDPTLGDAYNT--EQLTRLLLIASACINQTSACRPQMSKVVQALR 299
            + P L    +   +++ RL+     C+ +    RP   +++  + 
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIE 284

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 58.8 bits (143), Expect = 5e-10
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 104 IGQGGYAEVYKGQLEDGQF---VAIKRLTRGSPE-EMTTDYLSELGIIVHVDHPNIAKMI 159
           +G G +  V KG  +  +    VA+K L   + +  +  + L+E  ++  +D+P I +MI
Sbjct: 25  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84

Query: 160 GYGVEGGMHLILELSPHGSLASLL 183
           G        L++E++  G L   L
Sbjct: 85  GICEAESWMLVMEMAELGPLNKYL 108

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
              IG+G + +V  G    G  VA+K +   +  +    +L+E  ++  + H N+ ++  
Sbjct: 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQL-- 251

Query: 161 YGV----EGGMHLILELSPHGSLASLL 183
            GV    +GG++++ E    GSL   L
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYL 278

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 101 ENLIGQGGYAEVYKGQLE-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
              +G+G +  V   + +      G+ VA+K+L   + E +  D+  E+ I+  + H NI
Sbjct: 46  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNI 104

Query: 156 AKMIG---YGVEGGMHLILELSPHGSLASLL 183
            K  G         + LI+E  P+GSL   L
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 101 ENLIGQGGYAEVYKGQLE-----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
              +G+G +  V   + +      G+ VA+K+L   + E +  D+  E+ I+  + H NI
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNI 73

Query: 156 AKMIG---YGVEGGMHLILELSPHGSLASLL 183
            K  G         + LI+E  P+GSL   L
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.5 bits (144), Expect = 7e-10
 Identities = 33/190 (17%), Positives = 53/190 (27%), Gaps = 56/190 (29%)

Query: 103 LIGQGGYAEVYKG--QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
            I  GG   +Y    +  +G+ V +K L      E     ++E   +  V HP+I ++  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 161 YGVEGGMH------LILELSPHGSLASLLYAKWLPDKWT----------------HHIV- 197
           +      H      +++E     SL      K LP                      +V 
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-LPVAEAIAYLLEILPALSYLHSIGLVY 205

Query: 198 -----------------------------SKIEGTFGYLPPEFFMHGIADEKTDVYAYGV 228
                                          + GT G+  PE    G     TD+Y  G 
Sbjct: 206 NDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGR 264

Query: 229 LLLEIITGRQ 238
            L  +     
Sbjct: 265 TLAALTLDLP 274

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPN--IAKM 158
             IG GG ++V++   E  Q  AIK +    +  +    Y +E+  +  +   +  I ++
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 159 IGYGV-EGGMHLILELSPHGSLASLLYAK 186
             Y + +  +++++E   +  L S L  K
Sbjct: 75  YDYEITDQYIYMVMECG-NIDLNSWLKKK 102

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHPN--IAKM 158
             IG GG ++V++   E  Q  AIK +    +  +    Y +E+  +  +   +  I ++
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 159 IGYGV-EGGMHLILELSPHGSLASLLYAK 186
             Y + +  +++++E   +  L S L  K
Sbjct: 94  YDYEITDQYIYMVMECG-NIDLNSWLKKK 121

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 15/101 (14%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL--------EDGQFVAIKRLTRGSPEEMTTDYLSEL 144
              + L     +G+G + +V   +              VA+K L   + E+  +D +SE+
Sbjct: 66  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125

Query: 145 GIIVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
            ++  +  H NI  ++G   + G +++I+E +  G+L   L
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPN--IAKM 158
             IG GG ++V++   E  Q  AIK +       +    Y +E+  +  +   +  I ++
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 159 IGYGV-EGGMHLILELSPHGSLASLLYAK 186
             Y + +  +++++E   +  L S L  K
Sbjct: 122 YDYEITDQYIYMVMECG-NIDLNSWLKKK 149

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 101 ENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
            + +G+G +  V   +        G  VA+K+L    P++   D+  E+ I+  +    I
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-DFQREIQILKALHSDFI 86

Query: 156 AKMIG---YGVEGGMHLILELSPHGSL 179
            K  G         + L++E  P G L
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCL 113

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 23/193 (11%), Positives = 55/193 (28%), Gaps = 45/193 (23%)

Query: 103 LIGQGGYAEVYKGQLED---GQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPNIAK 157
             G     + ++    D    + VA+         P+++  + LS    +  +D P +A+
Sbjct: 38  FHGGVPPLQFWQA--LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 158 MIGYGVEGGMHLI-LELSPHGSLASLLYAKWLPD---KWTHHIVSKIE------------ 201
           ++         L+  E    GSL  +      P    +    + +  +            
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSID 155

Query: 202 ---------------GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS 246
                               +P        A+ + D+   G  L  ++  R  L  +   
Sbjct: 156 HPSRVRVSIDGDVVLAYPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVR 208

Query: 247 LVMWSSMKELVDP 259
             +  + ++    
Sbjct: 209 SGLAPAERDTAGQ 221

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQF-VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           ++ +G G Y EVY+G  +     VA+K L   + E    ++L E  ++  + HPN+ ++ 
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQL- 74

Query: 160 GYGV---EGGMHLILELSPHGSLASLL 183
             GV   E   ++I E   +G+L   L
Sbjct: 75  -LGVCTREPPFYIITEFMTYGNLLDYL 100

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 13/99 (13%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F   NL     +G G + +V +         +    VA+K L   +  +     +SEL I
Sbjct: 43  FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102

Query: 147 IVHVD-HPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
           + H+  H NI  ++G    GG + +I E   +G L + L
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 15/52 (28%)

Query: 188 LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQ 238
           LP KW                PE     +   ++DV++YG+LL EI + G  
Sbjct: 228 LPVKWM--------------APESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
             +   +++GQG  A V++G+  + G   AIK     S        + E  ++  ++H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 155 IAKMIGY---GVEGGMHLILELSPHGSLASLLYAK 186
           I K+             LI+E  P GSL ++L   
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP 103

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            + F+    IG+G + EV+KG      + VAIK +     E+   D   E+ ++   D P
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIV 197
            + K  G Y  +  + +I+E    GS   LL    L +     I+
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL 125

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 36/197 (18%), Positives = 58/197 (29%), Gaps = 65/197 (32%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTD------YLSELGIIVHVDHPNI 155
            +G GG + VY  +       VAIK +                 +  E+     + H NI
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREVHNSSQLSHQNI 73

Query: 156 AKMIGYGVEGGMH-LILELSPHGSLASLLYAKW-LPDKWT----------------HHIV 197
             MI    E   + L++E     +L+  + +   L                       IV
Sbjct: 74  VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133

Query: 198 ------------------------------------SKIEGTFGYLPPEFFMHGIADEKT 221
                                               + + GT  Y  PE       DE T
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193

Query: 222 DVYAYGVLLLEIITGRQ 238
           D+Y+ G++L E++ G  
Sbjct: 194 DIYSIGIVLYEMLVGEP 210

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 39/200 (19%), Positives = 66/200 (33%), Gaps = 69/200 (34%)

Query: 101 ENLIGQGGYAEVYKGQLED---GQFVAIKRLTRGSPEEMTTD------YLSELGIIVHVD 151
             L+G+GG  +VY+   ED    + VA+K +     E +++D         E      + 
Sbjct: 39  RRLVGRGGMGDVYEA--EDTVRERIVALKLM----SETLSSDPVFRTRMQREARTAGRLQ 92

Query: 152 HPNIAKMIGYGVEGGMH-LILELSPHGSLASLLYAKW-LPDKWTHHIVSKI--------- 200
            P++  +  +G   G   + + L     LA++L  +  L       IV +I         
Sbjct: 93  EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHA 152

Query: 201 -----------------EGT-----FG---------------------YLPPEFFMHGIA 217
                            +       FG                     Y+ PE F    A
Sbjct: 153 AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHA 212

Query: 218 DEKTDVYAYGVLLLEIITGR 237
             + D+YA   +L E +TG 
Sbjct: 213 TYRADIYALTCVLYECLTGS 232

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 101 ENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
           ++ +G G Y EVY+G  +     VA+K L   + E    ++L E  ++  + HPN+ +++
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLL 282

Query: 160 GYGVEGG-MHLILELSPHGSLASLL 183
           G        ++I E   +G+L   L
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYL 307

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 14/102 (13%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            +F     +G+GG+  V++ +   D    AIKR+   + E      + E+  +  ++HP 
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 155 IAKMIGYGVE-------------GGMHLILELSPHGSLASLL 183
           I +     +E               +++ ++L    +L   +
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 8/95 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG-SPEEMTTDYLSELGIIVH--- 149
           T  F     IG G +  V+K     DG   AIKR  +  +      + L E  +  H   
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE--VYAHAVL 67

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
             H ++ +      E   M +  E    GSLA  +
Sbjct: 68  GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI 102

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 56.4 bits (136), Expect = 5e-09
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
             +   +++GQG  A V++G+  + G   AIK     S        + E  ++  ++H N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 155 IAKM---IGYGVEGGMHLILELSPHGSLASLLYAK 186
           I K+             LI+E  P GSL ++L   
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP 103

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 96  DNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           D++  + +IG G  A V         + VAIKR+     +    + L E+  +    HPN
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 155 IAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           I      + V+  + L+++L   GS+  ++
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDII 104

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.4 bits (134), Expect = 7e-09
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            + +     +G G + +VYK +  E G   A K +   S EE+  DY+ E+ I+   DHP
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYIVEIEILATCDHP 76

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
            I K++G Y  +G + +++E  P G++ +++
Sbjct: 77  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 55.8 bits (134), Expect = 7e-09
 Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQ------LEDGQFVAIKRLTRGSPEEMTTDYLS 142
           +E Q  +      +L+G+G +A+VY+         ++ Q   +K     +P E       
Sbjct: 58  TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYI-GTQ 116

Query: 143 ELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
            +  +         K    +  + G  L+ EL  +G+L + +
Sbjct: 117 LMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 55.7 bits (134), Expect = 7e-09
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 14/104 (13%)

Query: 98  FSHENL-----IGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGI 146
           F  + L     +G+G + +V +            + VA+K L  G+        +SEL I
Sbjct: 19  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78

Query: 147 IVHVD-HPNIAKMIGY--GVEGGMHLILELSPHGSLASLLYAKW 187
           ++H+  H N+  ++G      G + +I+E    G+L++ L +K 
Sbjct: 79  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 55.6 bits (134), Expect = 8e-09
 Identities = 50/304 (16%), Positives = 89/304 (29%), Gaps = 73/304 (24%)

Query: 78  YLKPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEM 136
           +L    K   L +     D+F   + +G G    V+K      G  +A K +       +
Sbjct: 20  FLTQKQKVGELKD-----DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI 74

Query: 137 TTDYLSELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL-YAKWLPDKW-- 192
               + EL ++   + P I    G +  +G + + +E    GSL  +L  A  +P++   
Sbjct: 75  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134

Query: 193 ---------------THHIV------SKI----EGT-----FG----------------- 205
                           H I+      S I     G      FG                 
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194

Query: 206 -YLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA 264
            Y+ PE         ++D+++ G+ L+E+  GR  +       +      ++        
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 254

Query: 265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSE 324
                  R L           A    +  +V                    +     FS 
Sbjct: 255 PRPRTPGRPLNKFGMDSRPPMAIFELLDYIV---------------NEPPPKLPSGVFSL 299

Query: 325 EFFD 328
           EF D
Sbjct: 300 EFQD 303

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
           ++     +G+GG++ V   + L DG F A+KR+     ++   +   E  +    +HPNI
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNI 88

Query: 156 AKMIGYGVEGG-----MHLILELSPHGSLASLL 183
            +++ Y +          L+L     G+L + +
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 101 ENLIGQGGYAEVYKGQL--------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH 152
              +GQG + +++KG               V +K L +      +  +     ++  + H
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY-SESFFEAASMMSKLSH 71

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLL 183
            ++    G  V G    L+ E    GSL + L
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            + F     +G+G Y  VYK    E GQ VAIK++     E    + + E+ I+   D P
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSP 84

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           ++ K  G Y     + +++E    GS++ ++
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDII 115

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL--TRGSPEEMTTDYLSELGIIVHVD 151
           +D +  + ++G+G + EV        GQ  A+K +   +   +      L E+ ++  +D
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 152 HPNIAKMIG-YGVEGGMHLILELSPHGSL 179
           HPNI K+   +  +G  +L+ E+   G L
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGEL 113

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDH 152
           +++     IG G Y    K +   DG+ +  K       +  E     +SE+ ++  + H
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKH 64

Query: 153 PNIAKMIGYGVE---GGMHLILELSPHGSLASLL 183
           PNI +     ++     +++++E    G LAS++
Sbjct: 65  PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.6 bits (129), Expect = 5e-08
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
           ++ +     +G G Y EV            AIK +          +  L E+ ++  +DH
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 153 PNIAKMIG-YGVEGGMHLILELSPHGSL 179
           PNI K+   +  +   +L++E    G L
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGEL 123

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
             +F    ++GQG + +V K +   D ++ AIK++     EE  +  LSE+ ++  ++H 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQ 62

Query: 154 NIAKMIGYGVEGGMHLILELSPHGSLASLLY 184
            + +   Y         ++        S L+
Sbjct: 63  YVVRY--YAAWLERRNFVKPMTAVKKKSTLF 91

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
            + ++   ++G+G + EV K       Q  A+K +    +  + T+  L E+ ++  +DH
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 153 PNIAKMIG-YGVEGGMHLILEL 173
           PNI K+          +++ EL
Sbjct: 81  PNIMKLFEILEDSSSFYIVGEL 102

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 52.6 bits (126), Expect = 6e-08
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            +F     +G+GG+  V++ +   D    AIKR+   + E      + E+  +  ++HP 
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 155 IAKMIGYGVEGGMH 168
           I +     +E    
Sbjct: 66  IVRYFNAWLETPPE 79

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKR--LTRGSPEEMTTDYLSELGIIVHVD 151
              FS    IG G +  VY  + + + + VAIK+   +     E   D + E+  +  + 
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 152 HPNIAKMIG 160
           HPN  +  G
Sbjct: 113 HPNTIQYRG 121

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 52.6 bits (126), Expect = 7e-08
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 87  ALSELQAATDNFSHENLIGQG--GYAEVYKGQ-LEDGQFVAIKRLT-RGSPEEMTTDYLS 142
            +S        +    +IG+G      V   +    G++V ++R+       EM T    
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 143 ELGIIVHVDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           EL +    +HPNI      +  +  + ++     +GS   L+
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI 117

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTR-------GSPEEMTTDYLSELGI 146
            D +     +G G   EV    + +  + VAI+ +++           +   +  +E+ I
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 147 IVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
           +  ++HP I K+  +      +++LEL   G L
Sbjct: 194 LKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL 226

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
                  ++      IG+G Y  V K      GQ +A+KR+     E+     L +L ++
Sbjct: 15  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74

Query: 148 VH-VDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           +   D P I +  G    EG   + +EL    S     
Sbjct: 75  MRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFY 111

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTR-------GSPEEMTTDYLSELGI 146
            D +     +G G   EV    + +  + VAIK +++           +   +  +E+ I
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 147 IVHVDHPNIAKMIGYGVEGGMHLILELSPHGSL 179
           +  ++HP I K+  +      +++LEL   G L
Sbjct: 69  LKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL 101

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 14/203 (6%), Positives = 43/203 (21%), Gaps = 16/203 (7%)

Query: 38  KNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQAATDN 97
           K   + +     +  +     +       +                +    S L      
Sbjct: 16  KREEELIGYCREEALKEPAAMVEAVTATVWP------------QNAETTVDSLLSQGERK 63

Query: 98  FSHENLIGQGGYAEVYKG-QLEDGQFVAIK--RLTRGSPEEMTTDYLSELGIIVHVDHPN 154
                 +  G  + V+    +E  +  A+K   +   +                 +   +
Sbjct: 64  LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGES 123

Query: 155 IAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIV-SKIEGTFGYLPPEFFM 213
             +             + +      A L   +       + ++          L      
Sbjct: 124 PEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDF 183

Query: 214 HGIADEKTDVYAYGVLLLEIITG 236
             +      + A  +L  ++I  
Sbjct: 184 VYVFRGDEGILALHILTAQLIRL 206

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 40/205 (19%), Positives = 73/205 (35%), Gaps = 69/205 (33%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDH 152
           ++F   NL+G+G +A VY+ + +  G  VAIK + + +     M     +E+ I   + H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70

Query: 153 PNIAKMIGYGVEGGMH------LILELSPHGSLASLLYA--KWLPD----KWTHHIVS-- 198
           P+I ++  Y             L+LE+  +G +   L    K   +     + H I++  
Sbjct: 71  PSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125

Query: 199 --------------------------KIEGTFG--------------------YLPPEFF 212
                                     KI   FG                    Y+ PE  
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKI-ADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184

Query: 213 MHGIADEKTDVYAYGVLLLEIITGR 237
                  ++DV++ G +   ++ GR
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGR 209

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
            + ++   ++G+G + EV K       Q  A+K +    +  + T+  L E+ ++  +DH
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 153 PNIAKMIG-YGVEGGMHLILEL 173
           PNI K+          +++ EL
Sbjct: 81  PNIMKLFEILEDSSSFYIVGEL 102

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              ++    IGQG    VY    +  GQ VAI+++      +     ++E+ ++    +P
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNP 77

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           NI   +  Y V   + +++E    GSL  ++
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            D F  +  +G G + +V+   +   G    IK + +   +       +E+ ++  +DHP
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 154 NIAKMIG-YGVEGGMHLILEL 173
           NI K+   +     M++++E 
Sbjct: 81  NIIKIFEVFEDYHNMYIVMET 101

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMI 159
            +G+GG+A+ ++    +  +  A K + +              E+ I   + H ++    
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 106

Query: 160 GYGV---EGGMHLILELSPHGSLASLLYAK 186
            +G       + ++LEL    SL  L   +
Sbjct: 107 -HGFFEDNDFVFVVLELCRRRSLLELHKRR 135

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMI 159
            +G+GG+A+ ++    +  +  A K + +              E+ I   + H ++    
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF- 80

Query: 160 GYGV---EGGMHLILELSPHGSLASLLYAK 186
            +G       + ++LEL    SL  L   +
Sbjct: 81  -HGFFEDNDFVFVVLELCRRRSLLELHKRR 109

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
                    IG+G    V   +    G+ VA+K +     +       +E+ I+    H 
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR-ELLFNEVVIMRDYQHF 102

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
           N+ +M   Y V   + +++E    G+L  ++
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIV 133

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 50.2 bits (120), Expect = 4e-07
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK----RLTRGSPEEMTTDYLSELGIIVH 149
              +  +  IGQG Y  V    + +     AIK       R    +      +E+ ++  
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 150 VDHPNIAKMIG-YGVEGGMHLILELSPHGSL 179
           + HPNIA++   Y  E  + L++EL   G L
Sbjct: 85  LHHPNIARLYEVYEDEQYICLVMELCHGGHL 115

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 91  LQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           ++   D+      +G+G Y  V K + +  GQ +A+KR+      +     L +L I + 
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61

Query: 150 -VDHPNIAKMIG-YGVEGGMHLILELSPHGSLASLL 183
            VD P      G    EG + + +EL    SL    
Sbjct: 62  TVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFY 96

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK----RLTRGSPEEMTTDYLSELGIIVH 149
            D +    +IG+G ++ V +    E GQ  A+K         SP   T D   E  I   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 150 VDHPNIAKMIG-YGVEGGMHLILEL 173
           + HP+I +++  Y  +G ++++ E 
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEF 107

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 50.5 bits (120), Expect = 6e-07
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 12/125 (9%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              +  +  +G GG+  V +    + G+ VAIK+  +    +    +  E+ I+  ++HP
Sbjct: 13  CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72

Query: 154 NIAKMI-------GYGVEGGMHLILELSPHGSLASLLYAK----WLPDKWTHHIVSKIEG 202
           N+                    L +E    G L   L        L +     ++S I  
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132

Query: 203 TFGYL 207
              YL
Sbjct: 133 ALRYL 137

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              F    ++G G ++EV+   Q   G+  A+K + + SP    +   +E+ ++  + H 
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHE 66

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSL 179
           NI  +   Y      +L+++L   G L
Sbjct: 67  NIVTLEDIYESTTHYYLVMQLVSGGEL 93

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
           +DN+  +  +G+G ++ V +      G   A K + T+            E  I   + H
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 153 PNIAKMIG-YGVEGGMHLILEL 173
           PNI ++      E   +L+ +L
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDL 86

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 38/213 (17%), Positives = 65/213 (30%), Gaps = 78/213 (36%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            +F    LIG GG+ +V+K +   DG+   IKR+   + +        E+  +  +DH N
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVN 65

Query: 155 IAKMIGYGVEGG-----------------MHLILELSPHGSLASLL---YAKWLPD---- 190
           I    G                       + + +E    G+L   +     + L      
Sbjct: 66  IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125

Query: 191 KWTHHIVS----------------------------KIEGTFG----------------- 205
           +    I                              KI G FG                 
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI-GDFGLVTSLKNDGKRTRSKGT 184

Query: 206 --YLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
             Y+ PE        ++ D+YA G++L E++  
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHV 217

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 19/158 (12%)

Query: 32  PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSEL 91
               + ++ P        +  +    + +G+  L F +   + EL       K F     
Sbjct: 39  AFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAA-KEF----- 92

Query: 92  QAATDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK-------RLTRGSPEEMTTDYLSE 143
                 +  +++IG+G  + V +      G   A+K       RL+    EE+      E
Sbjct: 93  ---YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149

Query: 144 LGIIVHV-DHPNIAKMIG-YGVEGGMHLILELSPHGSL 179
             I+  V  HP+I  +I  Y     M L+ +L   G L
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 14/93 (15%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL------------TRGSPEEMTTDYL 141
            +++     +G G Y EV    +       AIK +               + E+   +  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 142 SELGIIVHVDHPNIAKMIG-YGVEGGMHLILEL 173
           +E+ ++  +DHPNI K+   +  +   +L+ E 
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 45/202 (22%), Positives = 69/202 (34%), Gaps = 66/202 (32%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH 152
           D+F     +G+G +  VY  +  ++   +A+K L +     E +      E+ I  H+ H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 153 PNIAKMIGYGVEGGMH------LILELSPHGSLASLL-YAKWLPDKWT------------ 193
           PNI +M  Y      H      L+LE +P G L   L       ++ +            
Sbjct: 74  PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 128

Query: 194 ----HHIV----------------SKIEGTFG------------------YLPPEFFMHG 215
                 ++                 KI   FG                  YLPPE     
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKI-ADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGK 187

Query: 216 IADEKTDVYAYGVLLLEIITGR 237
             DEK D++  GVL  E + G 
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGM 209

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 8/147 (5%)

Query: 34  KSAPKNIPKSV-TKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSELQ 92
           +S P      V      +  RR        + +    T+      Y+   WK +    ++
Sbjct: 90  QSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVE 149

Query: 93  AATDNFSH----ENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
              D+          +G G +  V++  +   G   A K +      +       E+  +
Sbjct: 150 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-TVRKEIQTM 208

Query: 148 VHVDHPNIAKMIG-YGVEGGMHLILEL 173
             + HP +  +   +  +  M +I E 
Sbjct: 209 SVLRHPTLVNLHDAFEDDNEMVMIYEF 235

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYL-SELGIIVHVDH 152
           T+ +     +G+G ++ V +  ++  GQ  A   +            L  E  I   + H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 153 PNIAKMIG-YGVEGGMHLILEL 173
           PNI ++      EG  +LI +L
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDL 91

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIV 148
            D++     +G G +A V K  Q   G+  A K     RL+         +   E+ I+ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 149 HVDHPNIAKMIG-YGVEGGMHLILEL 173
            + HPNI  +   +  +  + LILEL
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILEL 89

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
           +DN+  +  +G+G ++ V +      G   A K + T+            E  I   + H
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 153 PNIAKMIG-YGVEGGMHLILELSPHGSL 179
           PNI ++      E   +L+ +L   G L
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTGGEL 115

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 10/82 (12%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPN 154
           +    E ++G G    V       G+ VA+KR+      +     L E+ ++   D HPN
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI----DFCDIALMEIKLLTESDDHPN 70

Query: 155 IAKMIGYGVE---GGMHLILEL 173
           + +   Y  E     +++ LEL
Sbjct: 71  VIRY--YCSETTDRFLYIALEL 90

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 97  NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNI 155
           +F  ++++G G    +    + D + VA+KR+      E  +    E+ ++   D HPN+
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP----ECFSFADREVQLLRESDEHPNV 80

Query: 156 AKMIG-YGVEGGMHLILELSPHGSLASLLYAK 186
            +           ++ +EL    +L   +  K
Sbjct: 81  IRYFCTEKDRQFQYIAIELCA-ATLQEYVEQK 111

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 89  SELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
              QA  ++  +   +G G   +V+K +  + G  +A+K++ R   +E     L +L ++
Sbjct: 18  QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77

Query: 148 VH-VDHPNIAKMIG-YGVEGGMHLILEL 173
           +   D P I +  G +     + + +EL
Sbjct: 78  LKSHDCPYIVQCFGTFITNTDVFIAMEL 105

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH 152
           ++F     +G+G +  VY  +  +    +A+K L +       +      E+ I  H+ H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 153 PNIAKMIGYGVEGGMH------LILELSPHGSLASLL-YAKWLPDKWTHHIVSKIEGTFG 205
           PNI ++ GY      H      LILE +P G++   L       ++ T   ++++     
Sbjct: 69  PNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123

Query: 206 YL 207
           Y 
Sbjct: 124 YC 125

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
           +D F  E+ +G+G  + VY+  Q    +  A+K L +   +++      E+G+++ + HP
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHP 108

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSL 179
           NI K+   +     + L+LEL   G L
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGEL 135

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIV 148
            D +     +G G +A V K  +   G   A K     +           +   E+ I+ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 149 HVDHPNIAKMIG-YGVEGGMHLILEL 173
            V H N+  +   Y     + LILEL
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILEL 96

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 92  QAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIV 148
           Q   + +     +G+G Y  VYK +   G+ VA+KR+   + +E    T   + E+ ++ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLK 74

Query: 149 HVDHPNI 155
            + HPNI
Sbjct: 75  ELHHPNI 81

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIV 148
            D +     +G G +A V K  +   G   A K     +           +   E+ I+ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 149 HVDHPNIAKMIG-YGVEGGMHLILEL 173
            V HPNI  +   Y     + LILEL
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILEL 96

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK-----RLTRGSPEEMTTDYLSELGIIV 148
            D +     +G G +A V K  +   G   A K     R           D   E+ I+ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 149 HVDHPNIAKMIG-YGVEGGMHLILEL 173
            + HPN+  +   Y  +  + LILEL
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILEL 95

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 71/203 (34%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTD------YLSELGIIVHVDHPNI 155
           ++G GG +EV+  + L D + VA+K L      ++  D      +  E      ++HP I
Sbjct: 19  ILGFGGMSEVHLARDLRDHRDVAVKVL----RADLARDPSFYLRFRREAQNAAALNHPAI 74

Query: 156 AKMIGYGVEGGMH-----LILELSPHGSLASLLYAKW-LPDKWTHHIVSKI--------- 200
             +   G           +++E     +L  +++ +  +  K    +++           
Sbjct: 75  VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ 134

Query: 201 -----------------EGT-----FG-----------------------YLPPEFFMHG 215
                                    FG                       YL PE     
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194

Query: 216 IADEKTDVYAYGVLLLEIITGRQ 238
             D ++DVY+ G +L E++TG  
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEP 217

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVDH 152
           + +     IG+G Y  VYK Q   G+  A+K++     +E    TT  + E+ I+  + H
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKH 59

Query: 153 PNI 155
            NI
Sbjct: 60  SNI 62

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 83  WKNFALSELQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDY 140
                LS L+     F    L+G G Y +VYKG+ ++ GQ  AIK +   G  EE   + 
Sbjct: 11  LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE---EI 67

Query: 141 LSELGIIVHV-DHPNIAKMIG-------YGVEGGMHLILELSPHGSLASLL 183
             E+ ++     H NIA   G        G++  + L++E    GS+  L+
Sbjct: 68  KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              ++ EN IG+G + EV    Q       A K++ +   E++   +  E+ I+  +DHP
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHP 66

Query: 154 NIAKMIG-YGVEGGMHLILEL 173
           NI ++   +     ++L++EL
Sbjct: 67  NIIRLYETFEDNTDIYLVMEL 87

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
           +NF     IG+G Y  VYK +    G+ VA+K++   +  E    T   + E+ ++  ++
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60

Query: 152 HPNIAKMIG-YGVEGGMHLILE 172
           HPNI K++     E  ++L+ E
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFE 82

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE------MTTDYLSELGIIV 148
             +   + +G+G +A VYK +     Q VAIK++  G   E       T   L E+ ++ 
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTA--LREIKLLQ 67

Query: 149 HVDHPNIAKMIG-YGVEGGMHLILE 172
            + HPNI  ++  +G +  + L+ +
Sbjct: 68  ELSHPNIIGLLDAFGHKSNISLVFD 92

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 14/79 (17%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 97  NFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
             S   ++G G + +V+K  +   G  +A K +     ++   +  +E+ ++  +DH N+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANL 148

Query: 156 AKMIG-YGVEGGMHLILEL 173
            ++   +  +  + L++E 
Sbjct: 149 IQLYDAFESKNDIVLVMEY 167

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 19/114 (16%)

Query: 101 ENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTT-----DYLSELGIIVHVDHPN 154
             ++ +GG+A VY+ Q +  G+  A+KRL     E+         ++ +L       HPN
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL-----SGHPN 87

Query: 155 IAKMIGYGVEGGMH--------LILELSPHGSLASLLYAKWLPDKWTHHIVSKI 200
           I +       G           L+L     G L   L         +   V KI
Sbjct: 88  IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
             +     IG+G Y  V+K +  E  + VA+KR+     +E    +   L E+ ++  + 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELK 59

Query: 152 HPNI 155
           H NI
Sbjct: 60  HKNI 63

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH 152
            + +     +G+G +  V++  +    +    K +  +G+ +        E+ I+    H
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV---LVKKEISILNIARH 60

Query: 153 PNIAKMIG-YGVEGGMHLILEL 173
            NI  +   +     + +I E 
Sbjct: 61  RNILHLHESFESMEELVMIFEF 82

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIK--------RLTRGSPEEMTTDYLSELG 145
            +N+  + ++G+G  + V +       +  A+K          +    +E+    L E+ 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 146 IIVHVD-HPNIAKMIG-YGVEGGMHLILELSPHGSL 179
           I+  V  HPNI ++   Y       L+ +L   G L
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            D +     +G G +  V++  +   G+    K +    P +      +E+ I+  + HP
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY-TVKNEISIMNQLHHP 108

Query: 154 NIAKMIG-YGVEGGMHLILELSPHGSL 179
            +  +   +  +  M LILE    G L
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGEL 135

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
           +  +S    +G G +  V +   +E G+  A+K++     +        EL I+  +DH 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL---QDPRYK--NRELDIMKVLDHV 60

Query: 154 NIAKMIGY 161
           NI K++ Y
Sbjct: 61  NIIKLVDY 68

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 21/125 (16%)

Query: 32  PRKSAPKNIPKSVTKNAPKLTRRKTKRIRGSRGLSFNATLVDAELCYLKPGWKNFALSEL 91
           PR ++     K V + +   + + ++   GS+  +  AT          PG         
Sbjct: 5   PRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVAT----------PGQGP-----D 49

Query: 92  QAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV 150
           +    +++   +IG G +  VY+ +L + G+ VAIK++ +    +       EL I+  +
Sbjct: 50  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKL 104

Query: 151 DHPNI 155
           DH NI
Sbjct: 105 DHCNI 109

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 93  AATDNFS---------HENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLS 142
            +TD+FS          E+++G+G +A V     L   Q  A+K + +  P  + +    
Sbjct: 1   GSTDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFR 59

Query: 143 ELGIIVHV-DHPNIAKMIG-YGVEGGMHLILELSPHGSL 179
           E+ ++     H N+ ++I  +  E   +L+ E    GS+
Sbjct: 60  EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
           D +     +G+G Y EVYK       + VAIKR+     EE    T   + E+ ++  + 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQ 91

Query: 152 HPNIAKMI 159
           H NI ++ 
Sbjct: 92  HRNIIELK 99

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 22/102 (21%)

Query: 104 IGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLS----------------ELGII 147
           + QG + ++   + +D +F A+K+  +   E+      S                EL II
Sbjct: 39  LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 148 VHVDHPNIAKMIGYGV---EGGMHLILELSPHGSLASLLYAK 186
             + +         G+      +++I E   + S+       
Sbjct: 98  TDIKNEYCLTC--EGIITNYDEVYIIYEYMENDSILKFDEYF 137

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 93  AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIV 148
           +++  F     +G G YA VYKG     G +VA+K + +   EE    T   + E+ ++ 
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTA--IREISLMK 58

Query: 149 HVDHPNI 155
            + H NI
Sbjct: 59  ELKHENI 65

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
             +     IGQG + EV+K +  + GQ VA+K++   + +E   +T   L E+ I+  + 
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLLK 74

Query: 152 HPNIAKMIG 160
           H N+  +I 
Sbjct: 75  HENVVNLIE 83

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEM---TTDYLSELGIIVHVD 151
           + + +  L+G+G Y  V K +  + G+ VAIK+      ++M       + E+ ++  + 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--MREIKLLKQLR 82

Query: 152 HPNIAKMIG-YGVEGGMHLILE 172
           H N+  ++     +   +L+ E
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFE 104

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
           + +     IG+G Y  V+K +  + GQ VAIK+      +         L E+ ++  + 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA--LREIRMLKQLK 60

Query: 152 HPNIAKMIG-YGVEGGMHLILE 172
           HPN+  ++  +  +  +HL+ E
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFE 82

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
              +++  +IG G +  V++ +L +   VAIK++ +    +       EL I+  V HPN
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK-----NRELQIMRIVKHPN 93

Query: 155 IAKMIGY-------GVEGGMHLILELSP 175
           +  +  +         E  ++L+LE  P
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 96  DNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEE---MTTDYLSELGIIVHVD 151
           + +   + +G+G YA VYKG        VA+K + R   EE    T   + E+ ++  + 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTA--IREVSLLKDLK 58

Query: 152 HPNIAKMIG-YGVEGGMHLILE 172
           H NI  +      E  + L+ E
Sbjct: 59  HANIVTLHDIIHTEKSLTLVFE 80

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 42.2 bits (98), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 17/83 (20%)

Query: 94  ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD-------------- 139
            T+       IG+G + EV++    D   VAIK +    P+ +                 
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 140 --YLSELGIIVHVDHPNIAKMIG 160
              LS L   V         +  
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNS 99

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 104 IGQGGYAEVYKG-QLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDH-PNIAKMIG 160
           +G+G +A V +      GQ  A K L  R   ++   + L E+ ++      P +  +  
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96

Query: 161 -YGVEGGMHLILELSPHGSL 179
            Y     + LILE +  G +
Sbjct: 97  VYENTSEIILILEYAAGGEI 116

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
            +G+G Y EV         + VA+K +      +   +   E+ I   ++H N+ K   Y
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF--Y 71

Query: 162 GV---EGGMHLILELSPHGSL 179
           G        +L LE    G L
Sbjct: 72  GHRREGNIQYLFLEYCSGGEL 92

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 20/96 (20%)

Query: 94  ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE------MTT----DYLS 142
           AT  +     IG G Y  VYK +    G FVA+K +   +         ++T      L 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 143 ELGIIVHVDHPNIAKMI------GYGVEGGMHLILE 172
            L      +HPN+ +++          E  + L+ E
Sbjct: 67  RLE---AFEHPNVVRLMDVCATSRTDREIKVTLVFE 99

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 15/88 (17%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLS-----ELGIIVHVD----H 152
           L+G+GG+  V+ G  L D   VAIK + R      +    S     E+ ++  V     H
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97

Query: 153 PNIAKMIGYGV---EGGMHLILELSPHG 177
           P + ++        + G  L+LE     
Sbjct: 98  PGVIRL--LDWFETQEGFMLVLERPLPA 123

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY 161
            +G+G Y EV         + VA+K +      +   +   E+ I   ++H N+ K   Y
Sbjct: 14  TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF--Y 71

Query: 162 GV---EGGMHLILELSPHGSL 179
           G        +L LE    G L
Sbjct: 72  GHRREGNIQYLFLEYCSGGEL 92

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDY--LSELGIIVHVD 151
            D F  E + GQG +  V  G+    G  VAIK++     ++       L  +  +  + 
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQIMQDLAVLH 77

Query: 152 HPNI 155
           HPNI
Sbjct: 78  HPNI 81

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 104 IGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLS-ELGIIVHVDHPNIAKMIGY 161
           IG+G +A+V   + +  G+ VAIK + +      +   L  E+ I+  ++HPNI K+  +
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL--F 80

Query: 162 GV---EGGMHLILELSPHGSL 179
            V   E  ++LI+E +  G +
Sbjct: 81  EVIETEKTLYLIMEYASGGEV 101

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 14/89 (15%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLS-----ELGIIVHVDH--PN 154
           L+G GG+  VY G  + D   VAIK + +    +            E+ ++  V      
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109

Query: 155 IAKMIGYGV---EGGMHLILEL-SPHGSL 179
           + ++             LILE   P   L
Sbjct: 110 VIRL--LDWFERPDSFVLILERPEPVQDL 136

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 11/91 (12%)

Query: 97  NFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELG-------IIV 148
            +S  + +G G +  V+     E  + V +K + +    E       +LG       I+ 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 149 HVDHPNIAKMIGYGV-EGGMHLILELSPHGS 178
            V+H NI K+    + E      L +  HGS
Sbjct: 85  RVEHANIIKV--LDIFENQGFFQLVMEKHGS 113

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 95  TDNFSHENLIGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH-VDH 152
           TD +  +  IG G Y+   +          A+K + +        D   E+ I++    H
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-----RDPTEEIEILLRYGQH 75

Query: 153 PNIAKMIG-YGVEGGMHLILELSPHGSL 179
           PNI  +   Y     ++++ EL   G L
Sbjct: 76  PNIITLKDVYDDGKYVYVVTELMKGGEL 103

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 18/92 (19%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ--LEDGQFVAIKRLTRGSPEE---MTT----DYLSELGI 146
             +     IG+G Y +V+K +     G+FVA+KR+   + EE   ++T      L  L  
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE- 69

Query: 147 IVHVDHPNIAKMI------GYGVEGGMHLILE 172
               +HPN+ ++           E  + L+ E
Sbjct: 70  --TFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 104 IGQGGYAEVYKG-QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIG- 160
           +G+G ++   K    +  Q  A+K +++   E  T     E+  +   + HPNI K+   
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISK-RMEANT---QKEITALKLCEGHPNIVKLHEV 74

Query: 161 YGVEGGMHLILEL 173
           +  +    L++EL
Sbjct: 75  FHDQLHTFLVMEL 87

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTD---YLSELGIIVHV 150
            D +   +LIG G Y  V +     + + VAIK++ R    E   D    L E+ I+  +
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR--VFEDLIDCKRILREIAILNRL 109

Query: 151 DHPNIAKMI 159
           +H ++ K++
Sbjct: 110 NHDHVVKVL 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.98
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.98
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.98
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.98
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.98
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.98
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.98
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.98
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.98
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.98
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.98
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.98
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.98
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.98
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.95
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.89
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.56
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.51
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.03
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.47
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.28
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.55
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.48
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.29
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.31
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.84
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.81
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.23
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.35
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.83
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.48
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	90.93
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.14
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	86.89
3ats_A	357	Putative uncharacterized protein; hypothetical pro	86.3
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	82.52
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	81.79

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6.4e-44  Score=330.55  Aligned_cols=205  Identities=20%  Similarity=0.323  Sum_probs=155.3

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      ..++|.+.+.||+|+||+||+|++.+  .||||.++... ..+..+.|.+|+.+|++++|||||+++|++.++.++||||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmE  111 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQ  111 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEE
Confidence            34678888999999999999998753  59999997443 3455688999999999999999999999998888999999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------C-----------------CCCceeEEE
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------L-----------------PDKWTHHIV  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~-----------------~~~~~~~~~  197 (363)
                      ||++|+|.++|....                                      +                 .........
T Consensus       112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~  191 (307)
T 3omv_A          112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV  191 (307)
T ss_dssp             CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred             cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence            999999999885110                                      0                 000011123


Q ss_pred             eecccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhh-hhhcCCcCCCCCCHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM-KELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l  273 (363)
                      ...+||+.|||||++.+   +.|+.++|||||||+||||+||+.||.+..........+ .....|.+.. .+...+..+
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~l  270 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK-LYKNCPKAM  270 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTT-SCTTSCHHH
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccc-ccccchHHH
Confidence            45689999999999964   469999999999999999999999998765443333333 3333333322 233344559


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+|+.+||+.||.+||||.+|++.|+..
T Consensus       271 ~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          271 KRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             HHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999999988543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.7e-43  Score=327.15  Aligned_cols=200  Identities=23%  Similarity=0.354  Sum_probs=155.4

Q ss_pred             CCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ++...+.||+|+||+||+|.+.      +++.||||.++........+.|.+|+.++++++|||||+++|+|.+++ .+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4566788999999999999862      468899999976555555678999999999999999999999998765 899


Q ss_pred             EEEccCCCChhhhhhhccC-----------------------------------------------------CCCce---
Q 048684          170 ILELSPHGSLASLLYAKWL-----------------------------------------------------PDKWT---  193 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~-----------------------------------------------------~~~~~---  193 (363)
                      |||||++|+|.++|.....                                                     .....   
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki  186 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI  186 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEE
Confidence            9999999999998842110                                                     00000   


Q ss_pred             --------------eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          194 --------------HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       194 --------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                    .......+||+.|||||++.++.|+.++|||||||+||||+| |+.||.+............... 
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~-  265 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV-  265 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC-
T ss_pred             CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-
Confidence                          001123469999999999999999999999999999999999 8999988765544443333322 


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..+..++.    .+.+|+..||+.||.+||||.+|+++|+..
T Consensus       266 ~~~p~~~~~----~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          266 LPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            233334444    499999999999999999999999999753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.7e-43  Score=327.93  Aligned_cols=200  Identities=21%  Similarity=0.340  Sum_probs=156.6

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|...++||+|+||+||+|++.      +++.||||.++... ....+.|.+|+.+|++++|||||+++|+|.+++ .+
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            46777889999999999999864      47899999997654 444678999999999999999999999998766 89


Q ss_pred             EEEEccCCCChhhhhhhcc----------------------------------------------------CCCC-----
Q 048684          169 LILELSPHGSLASLLYAKW----------------------------------------------------LPDK-----  191 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~----------------------------------------------------~~~~-----  191 (363)
                      ||||||++|+|.++|....                                                    +...     
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence            9999999999998764210                                                    0000     


Q ss_pred             ------------ceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          192 ------------WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       192 ------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                  .........+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.......... .....
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i-~~g~~  278 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-TQGRE  278 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH-HHTCC
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH-HcCCC
Confidence                        00111234569999999999999999999999999999999999 99999877654444333 33333


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..+..++++    +.+|+.+||+.||.+||||.+|+++|+..
T Consensus       279 ~~~p~~~~~~----~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          279 LERPRACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             CCCCTTCCHH----HHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccccHH----HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            4444445554    99999999999999999999999998654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.6e-43  Score=325.00  Aligned_cols=199  Identities=22%  Similarity=0.354  Sum_probs=155.4

Q ss_pred             CCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|.+.+.||+|+||+||+|.+.      +|..||||.++... ....+.|.+|+.+|++++|||||+++|+|.+++ .+
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            57888899999999999999853      47889999997654 344678999999999999999999999998765 89


Q ss_pred             EEEEccCCCChhhhhhhcc--------------CCC------------------------------------Cc------
Q 048684          169 LILELSPHGSLASLLYAKW--------------LPD------------------------------------KW------  192 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------~~~------------------------------------~~------  192 (363)
                      ||||||++|+|.++|....              +++                                    ..      
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence            9999999999999884210              000                                    00      


Q ss_pred             -----------eeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCc
Q 048684          193 -----------THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPT  260 (363)
Q Consensus       193 -----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~  260 (363)
                                 ........+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+............+. .+.
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~-~~~  250 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-VLQ  250 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC-CCC
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCC
Confidence                       0011122358999999999999999999999999999999999 999998876555444443332 233


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+..++.    .+.+|+.+||+.||.+|||+.+|+..|+.
T Consensus       251 ~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~  286 (299)
T 4asz_A          251 RPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQN  286 (299)
T ss_dssp             CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            3344454    49999999999999999999999998864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=7.2e-42  Score=323.10  Aligned_cols=210  Identities=21%  Similarity=0.344  Sum_probs=167.5

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEEcC------CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC-CCcceEE
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLED------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH-PNIAKMI  159 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~  159 (363)
                      ...+++...++|++.+.||+|+||+||+|.+..      ++.||||.+.........+.|.+|+.+|.+++| ||||+++
T Consensus        55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            344566677899999999999999999998532      368999999877666667889999999999965 9999999


Q ss_pred             EEEEcC--CeEEEEEccCCCChhhhhhhcc--------------------------------------------------
Q 048684          160 GYGVEG--GMHLILELSPHGSLASLLYAKW--------------------------------------------------  187 (363)
Q Consensus       160 ~~~~~~--~~~lv~E~~~~gsL~~~l~~~~--------------------------------------------------  187 (363)
                      |+|.+.  .++||||||++|+|.++|....                                                  
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~  214 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  214 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcc
Confidence            998754  3899999999999999884210                                                  


Q ss_pred             --------------------CCCCceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhh
Q 048684          188 --------------------LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKS  246 (363)
Q Consensus       188 --------------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~  246 (363)
                                          +............+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+....
T Consensus       215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~  294 (353)
T 4ase_A          215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  294 (353)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence                                000001112234569999999999999999999999999999999998 99999876655


Q ss_pred             HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          247 LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ......+.....+..+...+++    +.+++..||+.||.+|||+.+|+++|+.
T Consensus       295 ~~~~~~i~~g~~~~~p~~~~~~----~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          295 EEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccCCHH----HHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            5555555555555555555555    8999999999999999999999999854

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-41  Score=320.30  Aligned_cols=197  Identities=20%  Similarity=0.327  Sum_probs=153.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+.... .....+.|.+|+.+|++++|||||++++++.+++ +|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            6899999999999999999985 679999999997554 3445678999999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhhcc---------------------------------------CCCCceeE---------------EEe
Q 048684          173 LSPHGSLASLLYAKW---------------------------------------LPDKWTHH---------------IVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~---------------~~~  198 (363)
                      ||+||+|.++|....                                       +.......               ...
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  183 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR  183 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence            999999999885211                                       00000000               012


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|||||++.+..|+.++|||||||+||||+||++||.+.+.......+...... .++..++.    .+.+|+.
T Consensus       184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~-~~~~~~s~----~~~~li~  258 (350)
T 4b9d_A          184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-PVSLHYSY----DLRSLVS  258 (350)
T ss_dssp             HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CCCTTSCH----HHHHHHH
T ss_pred             ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC-CCCccCCH----HHHHHHH
Confidence            346999999999999999999999999999999999999999987766665555554433 23333444    4999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.|++++
T Consensus       259 ~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          259 QLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             HHTCSSGGGSCCHHHHHTS
T ss_pred             HHccCChhHCcCHHHHhcC
Confidence            9999999999999999974

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.4e-41  Score=312.90  Aligned_cols=195  Identities=16%  Similarity=0.252  Sum_probs=156.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||++.+..  .....+.+.+|+.+|++++|||||++++++.+.+ +||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4799999999999999999984 679999999997432  1233578999999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhc------------------------------------------------------cCCCCceeEEE
Q 048684          172 ELSPHGSLASLLYAK------------------------------------------------------WLPDKWTHHIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~------------------------------------------------------~~~~~~~~~~~  197 (363)
                      |||+||+|.++|...                                                      .+.........
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~  191 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  191 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence            999999999988510                                                      00001111123


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ..++||+.|||||++.+..|+.++|||||||+||||+||++||.+.+.......+....  ..++...++    .+.+|+
T Consensus       192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~dli  265 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--YDFPEKFFP----KARDLV  265 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTCCH----HHHHHH
T ss_pred             cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCcccCH----HHHHHH
Confidence            45789999999999999999999999999999999999999998876655555544432  233344444    489999


Q ss_pred             HHccccCCCCCCCHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~  296 (363)
                      .+||+.||.+|||+.|++.
T Consensus       266 ~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          266 EKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             HHHSCSSGGGSTTSGGGTC
T ss_pred             HHHccCCHhHCcChHHHcC
Confidence            9999999999999998753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=9.4e-42  Score=320.18  Aligned_cols=200  Identities=16%  Similarity=0.251  Sum_probs=156.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ..|+..+.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+|+.++|||||++++++.+.+ +||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            5699999999999999999985 579999999997543222 456889999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhccCC------------------------------------C---------Cce------eEEEeeccc
Q 048684          174 SPHGSLASLLYAKWLP------------------------------------D---------KWT------HHIVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~------------------------------------~---------~~~------~~~~~~~~g  202 (363)
                      |++|+|.+++....++                                    .         ...      ......++|
T Consensus       153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~G  232 (346)
T 4fih_A          153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG  232 (346)
T ss_dssp             CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCS
T ss_pred             CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccccc
Confidence            9999999887521110                                    0         000      012345689


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|||||++.+..|+.++|||||||++|||+||++||.+.+....... +.....+.+.  .+...+..+.+|+.+||+
T Consensus       233 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~~~~--~~~~~s~~~~dli~~~L~  309 (346)
T 4fih_A          233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPPRLK--NLHKVSPSLKGFLDRLLV  309 (346)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSSCCCCS--CGGGSCHHHHHHHHHHSC
T ss_pred             CcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCCCCC--ccccCCHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999987655444333 3333333322  122344559999999999


Q ss_pred             cCCCCCCCHHHHHHHhh
Q 048684          283 QTSACRPQMSKVVQALR  299 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L~  299 (363)
                      .||.+|||+.|++++-+
T Consensus       310 ~dP~~R~ta~e~l~Hp~  326 (346)
T 4fih_A          310 RDPAQRATAAELLKHPF  326 (346)
T ss_dssp             SSTTTSCCHHHHTTCGG
T ss_pred             CChhHCcCHHHHhcCHh
Confidence            99999999999997543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-40  Score=304.01  Aligned_cols=196  Identities=22%  Similarity=0.335  Sum_probs=149.0

Q ss_pred             ccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCeEEEE
Q 048684           99 SHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-----GGMHLIL  171 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~lv~  171 (363)
                      ...++||+|+||+||+|.. .+|..||||.+.... .....+.|.+|+.+|++++|||||++++++.+     ..+||||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4556799999999999985 568999999996433 34456789999999999999999999998754     2278999


Q ss_pred             EccCCCChhhhhhhc----------------------------cCCC------------Ccee-------------EEEe
Q 048684          172 ELSPHGSLASLLYAK----------------------------WLPD------------KWTH-------------HIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~----------------------------~~~~------------~~~~-------------~~~~  198 (363)
                      |||++|+|.++|...                            .+..            ....             ....
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~  188 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  188 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence            999999999987410                            0000            0000             0123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-cCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-TLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  277 (363)
                      .++||+.|||||++.+ .|+.++|||||||+||||+||++||.+..........+.....| .++...++    .+.+|+
T Consensus       189 ~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~li  263 (290)
T 3fpq_A          189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP----EVKEII  263 (290)
T ss_dssp             ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH----HHHHHH
T ss_pred             CcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCH----HHHHHH
Confidence            4679999999999864 69999999999999999999999997655444444444333322 23333344    489999


Q ss_pred             HHccccCCCCCCCHHHHHHHhh
Q 048684          278 SACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+||+.||.+|||+.|++++-+
T Consensus       264 ~~~L~~dP~~R~s~~e~l~Hp~  285 (290)
T 3fpq_A          264 EGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHccCChhHCcCHHHHhcCcc
Confidence            9999999999999999997643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=319.55  Aligned_cols=200  Identities=16%  Similarity=0.255  Sum_probs=156.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .+.|+..+.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+|+.++|||||++++++.+.+ +|||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence            35699999999999999999985 679999999997554332 457889999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhhccCC------------------------------------C---------Cce------eEEEeecc
Q 048684          173 LSPHGSLASLLYAKWLP------------------------------------D---------KWT------HHIVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~------------------------------------~---------~~~------~~~~~~~~  201 (363)
                      ||+||+|.+++....++                                    .         ...      ......++
T Consensus       229 y~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~  308 (423)
T 4fie_A          229 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV  308 (423)
T ss_dssp             CCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCE
T ss_pred             CCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccc
Confidence            99999999887521100                                    0         000      01234568


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|||||++.+..|+.++|||||||++|||++|++||.+.......... .....+.+..  ....+..+.+|+.+||
T Consensus       309 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-~~~~~~~~~~--~~~~s~~~~dli~~~L  385 (423)
T 4fie_A          309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKN--LHKVSPSLKGFLDRLL  385 (423)
T ss_dssp             ECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCCCSC--TTSSCHHHHHHHHHHS
T ss_pred             cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-HcCCCCCCcc--cccCCHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999876654444333 3333333221  1223345999999999


Q ss_pred             ccCCCCCCCHHHHHHHh
Q 048684          282 NQTSACRPQMSKVVQAL  298 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L  298 (363)
                      +.||.+|||+.|++++-
T Consensus       386 ~~dP~~R~ta~ell~Hp  402 (423)
T 4fie_A          386 VRDPAQRATAAELLKHP  402 (423)
T ss_dssp             CSSTTTSCCHHHHTTCG
T ss_pred             CCChhHCcCHHHHhcCH
Confidence            99999999999999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3e-40  Score=309.02  Aligned_cols=195  Identities=18%  Similarity=0.238  Sum_probs=151.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .+.|...++||+|+||+||+|.. .+|+.||||+++....      +.+|+.+|+.++|||||++++++.+++ +|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35688888999999999999985 6799999999975432      246999999999999999999888766 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCCCce-eE-------------------
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPDKWT-HH-------------------  195 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~~~~-~~-------------------  195 (363)
                      ||+||+|.++|...                                     .+..+.. ..                   
T Consensus       131 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~  210 (336)
T 4g3f_A          131 LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL  210 (336)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred             ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence            99999999988510                                     0111100 00                   


Q ss_pred             -EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC-CcCCCCCCHHHHHHH
Q 048684          196 -IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRL  273 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  273 (363)
                       ....++||+.|||||++.+..|+.++|||||||+||||+||++||.+...............+ ..++...+    ..+
T Consensus       211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s----~~~  286 (336)
T 4g3f_A          211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCA----PLT  286 (336)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSC----HHH
T ss_pred             ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCC----HHH
Confidence             112357999999999999999999999999999999999999999876544444333333221 12223334    449


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          274 LLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+++.+||+.||.+|||+.|++++|.
T Consensus       287 ~~li~~~L~~dP~~R~sa~el~~~l~  312 (336)
T 4g3f_A          287 AQAIQEGLRKEPVHRASAMELRRKVG  312 (336)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHHH
Confidence            99999999999999999999998875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.9e-39  Score=294.73  Aligned_cols=195  Identities=17%  Similarity=0.275  Sum_probs=142.6

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||+|. ..+|+.||||.+.+..  .......+.+|+.+|++++|||||++++++.+.+ +|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            689999999999999999998 4679999999997543  2234567999999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhc-------------------------------cCCC------Cc--------------eeEEEeec
Q 048684          172 ELSPHGSLASLLYAK-------------------------------WLPD------KW--------------THHIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------~~~~------~~--------------~~~~~~~~  200 (363)
                      ||| +|+|.+++...                               ..++      ..              ........
T Consensus        93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  171 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS  171 (275)
T ss_dssp             ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred             eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCe
Confidence            999 67998887411                               0000      00              01123456


Q ss_pred             ccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      +||+.|||||++.+..| +.++|||||||++|||+||+.||.+.+............  +.++...++    .+.+|+.+
T Consensus       172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~~li~~  245 (275)
T 3hyh_A          172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--YTLPKFLSP----GAAGLIKR  245 (275)
T ss_dssp             ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTSCH----HHHHHHHH
T ss_pred             eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCH----HHHHHHHH
Confidence            89999999999998876 589999999999999999999998766544443333322  233333444    48999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+|||+.|++++
T Consensus       246 ~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          246 MLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             HSCSSGGGSCCHHHHHHC
T ss_pred             HccCChhHCcCHHHHHcC
Confidence            999999999999999975

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=6.5e-40  Score=304.32  Aligned_cols=201  Identities=21%  Similarity=0.298  Sum_probs=143.0

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----eEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----MHLIL  171 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~lv~  171 (363)
                      +|.+.+.||+|+||+||+|++ +|+.||||++......  ...+..|+..+.+++|||||+++|+|.+.+     ++|||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            467778999999999999998 5899999999643211  122335566667889999999999987542     68999


Q ss_pred             EccCCCChhhhhhhccCCC----------------------------CceeE----------------------------
Q 048684          172 ELSPHGSLASLLYAKWLPD----------------------------KWTHH----------------------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~~----------------------------~~~~~----------------------------  195 (363)
                      |||++|+|.++|....+++                            ...|+                            
T Consensus        81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  160 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  160 (303)
T ss_dssp             ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence            9999999999885211000                            00110                            


Q ss_pred             -------EEeecccccCCCCchhhccC------CCCccceEEechhHHHHHHhCCCCCCCchh---------------hH
Q 048684          196 -------IVSKIEGTFGYLPPEFFMHG------IADEKTDVYAYGVLLLEIITGRQALDSSQK---------------SL  247 (363)
Q Consensus       196 -------~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---------------~~  247 (363)
                             .....+||+.|||||++.+.      .|+.++|||||||+||||+||.+||.....               ..
T Consensus       161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~  240 (303)
T 3hmm_A          161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE  240 (303)
T ss_dssp             TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred             CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence                   01124699999999999754      478899999999999999999887643210               11


Q ss_pred             HHHHhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          248 VMWSSMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..........+|.++... +.+....+.+|+.+||+.||.+||||.+|++.|+.
T Consensus       241 ~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            111223344455544322 33566779999999999999999999999998854

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1e-39  Score=301.71  Aligned_cols=196  Identities=21%  Similarity=0.291  Sum_probs=147.2

Q ss_pred             CCCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ++|++.+.||+|+||+||+|+.    .+++.||||.+..... ......+.+|+.+|++++|||||++++++.+.+ +||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5799999999999999999985    2478999999975431 122346889999999999999999999887766 899


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEE
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~  197 (363)
                      |||||+||+|.++|....                                     +.....               ....
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  183 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  183 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc
Confidence            999999999999885110                                     000000               0112


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|||||++.+..|+.++|||||||+||||+||++||.+.+............  +.++...++    .+.+|+
T Consensus       184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~~li  257 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFLSP----EAQSLL  257 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCH----HHHHHH
T ss_pred             cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC--CCCCCcCCH----HHHHHH
Confidence            34689999999999999999999999999999999999999999876655554444432  233333444    499999


Q ss_pred             HHccccCCCCCCCH-----HHHHHH
Q 048684          278 SACINQTSACRPQM-----SKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~-----~evl~~  297 (363)
                      .+||+.||.+|||+     .|++++
T Consensus       258 ~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          258 RMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             HHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             HHHcccCHHHCCCCCcCCHHHHHcC
Confidence            99999999999984     577754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.4e-39  Score=297.24  Aligned_cols=195  Identities=17%  Similarity=0.312  Sum_probs=142.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--------  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------  166 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+.....+...+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4689999999999999999985 5799999999986665556678999999999999999999999775432        


Q ss_pred             -----eEEEEEccCCCChhhhhhhcc----------------------------------------CCCCcee-------
Q 048684          167 -----MHLILELSPHGSLASLLYAKW----------------------------------------LPDKWTH-------  194 (363)
Q Consensus       167 -----~~lv~E~~~~gsL~~~l~~~~----------------------------------------~~~~~~~-------  194 (363)
                           +|+|||||++|+|.+++....                                        +......       
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence                 589999999999988874110                                        0000000       


Q ss_pred             --------------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh
Q 048684          195 --------------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK  254 (363)
Q Consensus       195 --------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~  254 (363)
                                          ......+||+.|||||++.+..|+.++|||||||++|||++   ||............+.
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~  241 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR  241 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh
Confidence                                01123579999999999999999999999999999999996   8865433222222222


Q ss_pred             hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ....|.    ........+.+|+.+||+.||.+|||+.|++++
T Consensus       242 ~~~~p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          242 NLKFPP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             TTCCCH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cCCCCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            211111    112333457789999999999999999999974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=289.50  Aligned_cols=204  Identities=18%  Similarity=0.217  Sum_probs=151.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-------CC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-------GG  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------~~  166 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+|+.++|||||++++++..       ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999985 679999999997543 33446788999999999999999999998653       33


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------c------CCC---------Cc--------
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------W------LPD---------KW--------  192 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------~------~~~---------~~--------  192 (363)
                      +|||||||. |+|.+++...                               .      +..         ..        
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~  212 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP  212 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred             EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence            799999996 6788877410                               0      000         00        


Q ss_pred             --eeEEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC-------
Q 048684          193 --THHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG-------  262 (363)
Q Consensus       193 --~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-------  262 (363)
                        ........+||+.|||||++.+. .|+.++||||+||++|||+||++||.+.+..............|...       
T Consensus       213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~  292 (398)
T 4b99_A          213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA  292 (398)
T ss_dssp             ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC----
T ss_pred             cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhh
Confidence              01122356899999999998875 57999999999999999999999998876544443333222211100       


Q ss_pred             -----------C--CCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 -----------D--AYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 -----------~--~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                                 .  ..+     +..+..+.+|+.+||+.||.+|||+.|++++-+.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  348 (398)
T 4b99_A          293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL  348 (398)
T ss_dssp             -CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence                       0  000     1123458899999999999999999999986443

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.3e-36  Score=300.58  Aligned_cols=201  Identities=15%  Similarity=0.162  Sum_probs=157.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+...... ..+.+.+|+.+|+.++|||||++++++.+.. +||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~-~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh-hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            6899999999999999999985 67999999999765433 3577899999999999999999999888766 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCC-----------ce-----eEEEee
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDK-----------WT-----HHIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~-----------~~-----~~~~~~  199 (363)
                      |+||+|.++|....                                      +...           ..     ......
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~  315 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  315 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence            99999988773110                                      0000           00     012345


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|||||++.+..|+.++|||||||++|||++|.+||.+................  +........+..+.+||.+
T Consensus       316 ~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~dli~~  393 (573)
T 3uto_A          316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFIRK  393 (573)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCSGGGTTSCHHHHHHHHT
T ss_pred             eEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHHH
Confidence            68999999999999999999999999999999999999999887665554444333222  1111122234458999999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      ||+.||.+|||+.|++++-+
T Consensus       394 ~L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          394 LLLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             TSCSSGGGSCCHHHHHHSTT
T ss_pred             HccCChhHCcCHHHHhcCcC
Confidence            99999999999999998643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.6e-34  Score=274.18  Aligned_cols=204  Identities=18%  Similarity=0.265  Sum_probs=145.1

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ....+.|++.+.||+|+||+||+|+.    .+++.||||.+.....   ...+.+|+.+|..+ +|||||++++++.+.+
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~   93 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKND   93 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence            34567899999999999999999974    2468899999875432   35688999999998 6999999999877666


Q ss_pred             -eEEEEEccCCCChhhhhhh----------------------------ccCCC------C----------ce--------
Q 048684          167 -MHLILELSPHGSLASLLYA----------------------------KWLPD------K----------WT--------  193 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~----------------------------~~~~~------~----------~~--------  193 (363)
                       +|+|||||++|+|.+++..                            ...|+      .          ..        
T Consensus        94 ~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred             EEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence             8999999999999887740                            00000      0          00        


Q ss_pred             --------------------------eEEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhh
Q 048684          194 --------------------------HHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKS  246 (363)
Q Consensus       194 --------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~  246 (363)
                                                .......+||+.|||||++.+. .|+.++||||+||++|||+||+.||......
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~  253 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD  253 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence                                      0112345799999999999876 5899999999999999999999999654322


Q ss_pred             HHHHHhhhhh-------------------------------------cC---CcCC---------CCCCHHHHHHHHHHH
Q 048684          247 LVMWSSMKEL-------------------------------------VD---PTLG---------DAYNTEQLTRLLLIA  277 (363)
Q Consensus       247 ~~~~~~~~~~-------------------------------------~~---~~~~---------~~~~~~~~~~l~~li  277 (363)
                      ......+...                                     .+   |.+.         .......+..+.+|+
T Consensus       254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl  333 (361)
T 4f9c_A          254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL  333 (361)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence            1111100000                                     00   0000         000112234588999


Q ss_pred             HHccccCCCCCCCHHHHHHHh
Q 048684          278 SACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+||+.||.+|||+.|++++-
T Consensus       334 ~~lL~~dP~~R~ta~eaL~Hp  354 (361)
T 4f9c_A          334 DKLLDLNPASRITAEEALLHP  354 (361)
T ss_dssp             HHHTCSCTTTSCCHHHHHTSG
T ss_pred             HHHCcCChhHCcCHHHHhcCc
Confidence            999999999999999999754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.9e-35  Score=272.16  Aligned_cols=215  Identities=35%  Similarity=0.644  Sum_probs=167.9

Q ss_pred             ccCHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        85 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      .+++.++...+++|...+.||+|+||+||+|...+|+.||||.+...... ..+.+.+|+.++..++||||+++++++..
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ-GIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS-HHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH-HHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            34455666788999999999999999999999878999999998765433 36789999999999999999999999876


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccC-----------------------------------C------CCcee--------
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWL-----------------------------------P------DKWTH--------  194 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~-----------------------------------~------~~~~~--------  194 (363)
                      .+ .++||||+++|+|.+++.....                                   +      .....        
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS  186 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence            65 8999999999999988742110                                   0      00000        


Q ss_pred             ---------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh----hHHHHH-------hhh
Q 048684          195 ---------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK----SLVMWS-------SMK  254 (363)
Q Consensus       195 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~----~~~~~~-------~~~  254 (363)
                               .......||+.|+|||++.+..++.++|||||||++|||+||+.||.....    ....|.       .+.
T Consensus       187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (321)
T 2qkw_B          187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE  266 (321)
T ss_dssp             EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred             cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence                     011223589999999999999999999999999999999999999975422    111121       122


Q ss_pred             hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+++.+...........+.+++.+||+.||.+|||+.+++++|+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  312 (321)
T 2qkw_B          267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY  312 (321)
T ss_dssp             SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            3344555556678888999999999999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.5e-35  Score=271.91  Aligned_cols=220  Identities=38%  Similarity=0.680  Sum_probs=171.5

Q ss_pred             CCcccCHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           82 GWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        82 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      ....|++.++...+++|...+.||+|+||+||+|...+|+.||||.+...........+.+|+.++..++||||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            34678999999999999999999999999999999878999999999765433333478999999999999999999999


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhccCC------------------------C----Ccee------------------
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAKWLP------------------------D----KWTH------------------  194 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~~~~------------------------~----~~~~------------------  194 (363)
                      +.... .++||||+++|+|.+++......                        .    ...|                  
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl  175 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV  175 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence            88765 88999999999998877421100                        0    0000                  


Q ss_pred             --------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCch------hhHHHHH---
Q 048684          195 --------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ------KSLVMWS---  251 (363)
Q Consensus       195 --------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~------~~~~~~~---  251 (363)
                                    .......||+.|+|||++.+..++.++|||||||++|||+||+.||....      .....|.   
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence                          01122348999999999999999999999999999999999999996321      1111111   


Q ss_pred             ----hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          252 ----SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       252 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                          ......+..+...+.......+.+++..||+.||.+|||+.+|+++|++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence                12333444555567788889999999999999999999999999999753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.4e-34  Score=290.49  Aligned_cols=199  Identities=22%  Similarity=0.315  Sum_probs=146.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|++.++||+|+||+||+|+. .+|+.||||++.+..     ..........++.+++.++|||||++++++.+.+ +|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            6799999999999999999985 679999999996432     1122223334466777889999999999887766 89


Q ss_pred             EEEEccCCCChhhhhhhcc-------------------------------------CCCC---------c----eeEEEe
Q 048684          169 LILELSPHGSLASLLYAKW-------------------------------------LPDK---------W----THHIVS  198 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~---------~----~~~~~~  198 (363)
                      ||||||+||+|.++|....                                     +...         .    ......
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~  348 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  348 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCC
Confidence            9999999999999885110                                     0000         0    001123


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHH--HHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--MWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      ..|||+.|||||++.. ..|+.++|||||||+||||+||++||.+......  ....+. ...+.++..++++    +.+
T Consensus       349 t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~-~~~~~~p~~~S~~----a~d  423 (689)
T 3v5w_A          349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-TMAVELPDSFSPE----LRS  423 (689)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH-HCCCCCCTTSCHH----HHH
T ss_pred             CccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-CCCCCCCccCCHH----HHH
Confidence            5689999999999975 5799999999999999999999999986533211  111111 1223333444444    999


Q ss_pred             HHHHccccCCCCCCC-----HHHHHHHhh
Q 048684          276 IASACINQTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       276 li~~cl~~dP~~RPt-----~~evl~~L~  299 (363)
                      |+.+||+.||.+|++     +.+|+++-.
T Consensus       424 LI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          424 LLEGLLQRDVNRRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             HHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred             HHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence            999999999999998     688887544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.5e-34  Score=264.66  Aligned_cols=205  Identities=24%  Similarity=0.362  Sum_probs=157.2

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ....++|.+.+.||+|+||+||+|.. +|..||||.+.... .......|.+|+.++.+++|||||++++++.... .++
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            34457899999999999999999987 58899999997554 3444678999999999999999999999988765 899


Q ss_pred             EEEccCCCChhhhhhhc-------------------------------cCCC-----------CceeE------------
Q 048684          170 ILELSPHGSLASLLYAK-------------------------------WLPD-----------KWTHH------------  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~-------------------------------~~~~-----------~~~~~------------  195 (363)
                      ||||+++|+|.+++...                               ....           .....            
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            99999999998877411                               0000           00000            


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                         .....+||+.|+|||++.+..++.++|||||||++|||+||+.||....................++...+..    
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  267 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ----  267 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHH----
T ss_pred             cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH----
Confidence               0123469999999999999999999999999999999999999998766544433332233333344444544    


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.+++..||+.||.+|||+.++++.|+..
T Consensus       268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          268 VAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999998754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=4e-34  Score=270.72  Aligned_cols=213  Identities=22%  Similarity=0.352  Sum_probs=166.8

Q ss_pred             ccCHHHHHHhcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcce
Q 048684           85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAK  157 (363)
Q Consensus        85 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~  157 (363)
                      .+....+....++|.+.+.||+|+||.||+|.+      .+++.||||.+.........+.+.+|+.++.++ +|||||+
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            345566677788999999999999999999973      235789999998766555567899999999999 7999999


Q ss_pred             EEEEEEcCC--eEEEEEccCCCChhhhhhhccC-----------------------------------------------
Q 048684          158 MIGYGVEGG--MHLILELSPHGSLASLLYAKWL-----------------------------------------------  188 (363)
Q Consensus       158 l~~~~~~~~--~~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------  188 (363)
                      +++++.+.+  .++|||||++|+|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999987644  7899999999999888753210                                               


Q ss_pred             --------------------CC------------------------------------C-----------------ceeE
Q 048684          189 --------------------PD------------------------------------K-----------------WTHH  195 (363)
Q Consensus       189 --------------------~~------------------------------------~-----------------~~~~  195 (363)
                                          +.                                    .                 ....
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence                                00                                    0                 0000


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||+| |..||.+..........+.....+..+...+.+    +.
T Consensus       251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~  326 (359)
T 3vhe_A          251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----MY  326 (359)
T ss_dssp             EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHH----HH
T ss_pred             hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHH----HH
Confidence            1112347888999999999999999999999999999999 999998766554444555554444444445554    89


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++..||+.||.+|||+.+++++|+..
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999999654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.2e-34  Score=265.17  Aligned_cols=200  Identities=18%  Similarity=0.287  Sum_probs=153.6

Q ss_pred             cCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|...+.||+|+||+||+|. ..+|+.||||.+....... .+.+.+|+.+++.++|||||++++++..++ .++|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            4679999999999999999998 4679999999986543322 467899999999999999999999887665 899999


Q ss_pred             ccCCCChhhhhhhccCC------------------------------------CCcee---------------EEEeecc
Q 048684          173 LSPHGSLASLLYAKWLP------------------------------------DKWTH---------------HIVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~~~------------------------------------~~~~~---------------~~~~~~~  201 (363)
                      ||++|+|.+++....++                                    .....               ......+
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  177 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (297)
T ss_dssp             CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCC
T ss_pred             CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCcc
Confidence            99999999887421100                                    00000               0112346


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|+|||++.+..++.++|||||||++|||+||+.||................. +.+  ..+......+.+++.+||
T Consensus       178 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l  254 (297)
T 3fxz_A          178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PEL--QNPEKLSAIFRDFLNRCL  254 (297)
T ss_dssp             SCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-CCC--SCGGGSCHHHHHHHHHHS
T ss_pred             CCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCC--CCccccCHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999987655443333322221 111  122233455899999999


Q ss_pred             ccCCCCCCCHHHHHHHh
Q 048684          282 NQTSACRPQMSKVVQAL  298 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L  298 (363)
                      +.||.+|||+.+++++-
T Consensus       255 ~~dp~~Rps~~ell~h~  271 (297)
T 3fxz_A          255 EMDVEKRGSAKELLQHQ  271 (297)
T ss_dssp             CSSTTTSCCHHHHTTCG
T ss_pred             cCChhHCcCHHHHhhCh
Confidence            99999999999999754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=6.1e-34  Score=258.37  Aligned_cols=200  Identities=20%  Similarity=0.293  Sum_probs=157.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--G-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~-~~lv~  171 (363)
                      ++|...+.||+|+||+||+|... |..||||.+.... .....+.|.+|+.++.+++||||+++++++.+.  . .++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            57888999999999999999985 8899999997554 344567899999999999999999999998875  3 79999


Q ss_pred             EccCCCChhhhhhhcc---C-------------------CC-C--cee----------------EE----------Eeec
Q 048684          172 ELSPHGSLASLLYAKW---L-------------------PD-K--WTH----------------HI----------VSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---~-------------------~~-~--~~~----------------~~----------~~~~  200 (363)
                      ||+++|+|.+++....   +                   .. .  ..|                .+          ....
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~  168 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR  168 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCc
Confidence            9999999998885221   0                   00 0  111                01          0123


Q ss_pred             ccccCCCCchhhccCCCCc---cceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADE---KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~---~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      .||+.|+|||++.+..++.   ++|||||||++|||+||+.||..................+..+...+..    +.+++
T Consensus       169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~li  244 (271)
T 3kmu_A          169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH----VSKLM  244 (271)
T ss_dssp             BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHH----HHHHH
T ss_pred             cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHH----HHHHH
Confidence            4899999999998765544   8999999999999999999998776655544555555555555555554    99999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..||+.||.+|||+.++++.|+.
T Consensus       245 ~~~l~~~p~~Rps~~~il~~L~~  267 (271)
T 3kmu_A          245 KICMNEDPAKRPKFDMIVPILEK  267 (271)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHHHHH
Confidence            99999999999999999998864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=9.2e-34  Score=263.15  Aligned_cols=208  Identities=22%  Similarity=0.340  Sum_probs=156.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||+|.. .+|..||+|.+.... ....+.|.+|+.++.+++||||+++++++.+.. .++||||
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            5788899999999999999995 568999999986543 344678999999999999999999999888766 8899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------CC------CCceeEE-------------------
Q 048684          174 SPHGSLASLLYAKW--------------------------------LP------DKWTHHI-------------------  196 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------~~------~~~~~~~-------------------  196 (363)
                      +++|+|.+++....                                .+      ......+                   
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  168 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL  168 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence            99999998875210                                00      0000000                   


Q ss_pred             ----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCC
Q 048684          197 ----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAY  265 (363)
Q Consensus       197 ----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~  265 (363)
                                ....+||+.|+|||++.+..++.++|||||||++|||++|..||.......... .......+...+...
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (310)
T 3s95_A          169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNC  248 (310)
T ss_dssp             -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTC
T ss_pred             ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCC
Confidence                      014569999999999999999999999999999999999999986532111000 000111111112223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChHHHHHH
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQI  308 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~  308 (363)
                      +.    .+.+++..||+.||.+|||+.++++.|+.....+...
T Consensus       249 ~~----~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~  287 (310)
T 3s95_A          249 PP----SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH  287 (310)
T ss_dssp             CT----THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred             CH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence            33    3889999999999999999999999998776665543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=5.3e-33  Score=260.28  Aligned_cols=201  Identities=25%  Similarity=0.351  Sum_probs=154.7

Q ss_pred             CCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|.+.+.||+|+||+||+|...    .+..||||.+.........+.|.+|+.++..++|||||++++++.++. .++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            57888999999999999999863    355699999987666666788999999999999999999999988765 8999


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCcee------------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTH------------------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~------------------  194 (363)
                      |||+++|+|.+++....                                      +......                  
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  208 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA  208 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CC
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccce
Confidence            99999999998874110                                      0000000                  


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |..||............ ........+..++.    .+
T Consensus       209 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~l  283 (325)
T 3kul_A          209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCPH----AL  283 (325)
T ss_dssp             EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HTTCCCCCCTTCCH----HH
T ss_pred             eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCCCCCCCCcCH----HH
Confidence            01112235778999999999999999999999999999999 99999876554443332 22223333333444    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+|+..||+.||.+|||+.+|++.|+..
T Consensus       284 ~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          284 HQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999999998643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.9e-33  Score=268.06  Aligned_cols=202  Identities=22%  Similarity=0.383  Sum_probs=156.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE--------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL--------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~--------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      .++|.+.+.||+|+||+||+|..        .++..||||.+...........+.+|+.++..+ +|||||++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46789999999999999999984        235679999998766666678899999999999 899999999998876


Q ss_pred             C-eEEEEEccCCCChhhhhhhccCC-----------------------------------------------------CC
Q 048684          166 G-MHLILELSPHGSLASLLYAKWLP-----------------------------------------------------DK  191 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~~-----------------------------------------------------~~  191 (363)
                      + .|+||||+++|+|.+++......                                                     ..
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  239 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  239 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence            5 89999999999999887532100                                                     00


Q ss_pred             ceeEE-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          192 WTHHI-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       192 ~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                      ....+                 .....||+.|+|||++.+..++.++|||||||++|||+| |..||.+......... +
T Consensus       240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-~  318 (370)
T 2psq_A          240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-L  318 (370)
T ss_dssp             CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-H
T ss_pred             CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-H
Confidence            00000                 011236678999999999999999999999999999999 9999987654443322 2


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .....+..+..++.    .+.+++..||+.||.+|||+.++++.|+..
T Consensus       319 ~~~~~~~~~~~~~~----~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          319 KEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             HTTCCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22223333333444    499999999999999999999999998654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.2e-32  Score=253.19  Aligned_cols=216  Identities=29%  Similarity=0.571  Sum_probs=166.0

Q ss_pred             CCcccCHHHHHHhcCCCccC------CcccccCceEEEEEEEcCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhCCC
Q 048684           82 GWKNFALSELQAATDNFSHE------NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHVDH  152 (363)
Q Consensus        82 ~~~~~~~~~l~~~~~~f~~~------~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~H  152 (363)
                      ....|++.++..++++|...      +.||+|+||+||+|.. ++..||||.+....   .....+.|.+|+.++..++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            34678999999999999887      8999999999999987 58899999986432   23446789999999999999


Q ss_pred             CCcceEEEEEEcCC-eEEEEEccCCCChhhhhhhcc----------------------------------------CCCC
Q 048684          153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW----------------------------------------LPDK  191 (363)
Q Consensus       153 ~niv~l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~----------------------------------------~~~~  191 (363)
                      |||+++++++.+.. .++||||+++|+|.+++....                                        +...
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~  169 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA  169 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence            99999999988765 899999999999988774110                                        0000


Q ss_pred             c-----------------eeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--HH-H
Q 048684          192 W-----------------THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--MW-S  251 (363)
Q Consensus       192 ~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--~~-~  251 (363)
                      .                 .........||+.|+|||++.+ .++.++|||||||++|+|+||.+||........  .+ .
T Consensus       170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  248 (307)
T 2nru_A          170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE  248 (307)
T ss_dssp             CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHH
T ss_pred             CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHH
Confidence            0                 0011123468999999998864 589999999999999999999999976432211  00 1


Q ss_pred             -------hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          252 -------SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       252 -------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                             .+...+++.+ ...+......+.+++..||+.||.+|||+.+|++.|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~  303 (307)
T 2nru_A          249 EIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE  303 (307)
T ss_dssp             HHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             Hhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                   1122333333 23466778889999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.6e-33  Score=263.38  Aligned_cols=213  Identities=16%  Similarity=0.221  Sum_probs=160.1

Q ss_pred             cccCHHHHHHhcCC----------CccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC
Q 048684           84 KNFALSELQAATDN----------FSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH  152 (363)
Q Consensus        84 ~~~~~~~l~~~~~~----------f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H  152 (363)
                      ..+++.++..+++.          |...+.||+|+||+||+|... +|+.||||.+...... ..+.+.+|+.++..++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-SHHHHHHHHHHHTTCCC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-HHHHHHHHHHHHHhCCC
Confidence            35777787777654          667778999999999999964 7999999999755433 35678999999999999


Q ss_pred             CCcceEEEEEEcCC-eEEEEEccCCCChhhhhhhccC------------------------------------CCCce--
Q 048684          153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWL------------------------------------PDKWT--  193 (363)
Q Consensus       153 ~niv~l~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~~~--  193 (363)
                      ||||++++++.... .++||||+++|+|.+++....+                                    .....  
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k  181 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK  181 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEE
Confidence            99999999887765 8999999999999887642110                                    00000  


Q ss_pred             -------eE------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc
Q 048684          194 -------HH------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT  260 (363)
Q Consensus       194 -------~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~  260 (363)
                             ..      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.....+.
T Consensus       182 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~  260 (321)
T 2c30_A          182 LSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRDSPPPK  260 (321)
T ss_dssp             ECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSSCCC
T ss_pred             EeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcCCCCC
Confidence                   00      112346999999999999999999999999999999999999999876543332 2223322222


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +..  .......+.+++.+||+.||.+|||+.+++++...
T Consensus       261 ~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~  298 (321)
T 2c30_A          261 LKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL  298 (321)
T ss_dssp             CTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             cCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            211  12233458999999999999999999999986543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-33  Score=267.61  Aligned_cols=204  Identities=21%  Similarity=0.374  Sum_probs=156.2

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...++|...+.||+|+||+||+|... +|+.||||.+...........|.+|+.++.+++|||||++++++.... .++|
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            34467888999999999999999964 789999999986655555668999999999999999999999988765 8999


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeEE-------------E--
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI-------------V--  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~-------------~--  197 (363)
                      ||||++|+|.+++....                                      +.......+             .  
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            99999999998875210                                      000000000             0  


Q ss_pred             --eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          198 --SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       198 --~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                        ....+++.|+|||++.++.++.++|||||||++|||+| |..||........... +........+...+.    .+.
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l~  345 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF-VEKGGRLPCPELCPD----AVF  345 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-HHTTCCCCCCTTCCH----HHH
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCH----HHH
Confidence              00124667999999999999999999999999999998 9999987654433322 222222233333444    489


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +|+..||+.||.+|||+.++++.|+..
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            999999999999999999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.98  E-value=3.8e-33  Score=253.67  Aligned_cols=199  Identities=21%  Similarity=0.364  Sum_probs=154.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|...+.||+|+||+||+|...++..||||.+......  .+.+.+|+.++.+++||||+++++++.+.. .++||||+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            578889999999999999999878899999999865433  367999999999999999999999988765 89999999


Q ss_pred             CCCChhhhhhhccC--CC------------------------------------CceeEE----------------Eeec
Q 048684          175 PHGSLASLLYAKWL--PD------------------------------------KWTHHI----------------VSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~~--~~------------------------------------~~~~~~----------------~~~~  200 (363)
                      ++|+|.+++.....  +.                                    .....+                ....
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  167 (269)
T 4hcu_A           88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  167 (269)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence            99999988742110  00                                    000000                0012


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .||+.|+|||++.+..++.++|||||||++|+|+| |+.||............ .....+..+...+.    .+.+++..
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~li~~  242 (269)
T 4hcu_A          168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAST----HVYQIMNH  242 (269)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTSCH----HHHHHHHH
T ss_pred             ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-hcCccCCCCCcCCH----HHHHHHHH
Confidence            36678999999999999999999999999999999 99999876554433332 22223333333444    48999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhcC
Q 048684          280 CINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ||+.||.+|||+.+++++|+..
T Consensus       243 ~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          243 CWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HccCCcccCcCHHHHHHHHHHH
Confidence            9999999999999999998643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.7e-33  Score=263.60  Aligned_cols=206  Identities=21%  Similarity=0.311  Sum_probs=157.4

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      ...++|...+.||+|+||+||+|..      .++..||||.+...........+.+|+.++.++ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            3457899999999999999999985      235689999997654444457899999999999 899999999988876


Q ss_pred             C-eEEEEEccCCCChhhhhhhccCC------------------------C------------------------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKWLP------------------------D------------------------------  190 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~~------------------------~------------------------------  190 (363)
                      + .++||||+++|+|.+++......                        .                              
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  201 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  201 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence            5 89999999999999887532110                        0                              


Q ss_pred             ------Ccee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhh
Q 048684          191 ------KWTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKS  246 (363)
Q Consensus       191 ------~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~  246 (363)
                            ....                 .......||+.|+|||++.+..++.++|||||||++|||+| |..||.+....
T Consensus       202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  281 (344)
T 1rjb_A          202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  281 (344)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence                  0000                 00112236778999999999999999999999999999998 99999876655


Q ss_pred             HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          247 LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      ......+.....+..+...+..    +.+|+..||+.||.+|||+.+++++|+...
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~----l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          282 ANFYKLIQNGFKMDQPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCCCCCCCCCCHH----HHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            4444444444444444444444    999999999999999999999999987543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.98  E-value=1.4e-32  Score=254.87  Aligned_cols=203  Identities=20%  Similarity=0.310  Sum_probs=159.1

Q ss_pred             hcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ..++|...+.||+|+||+||+|..      .++..||||.+.........+.+.+|+.++.++ +||||+++++++...+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346899999999999999999984      346789999998766555568899999999999 8999999999987765


Q ss_pred             -eEEEEEccCCCChhhhhhhccC-------------------CC------------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL-------------------PD------------------------------------  190 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~-------------------~~------------------------------------  190 (363)
                       .++||||+++|+|.+++.....                   +.                                    
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence             8999999999999988753210                   00                                    


Q ss_pred             Ccee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHh
Q 048684          191 KWTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSS  252 (363)
Q Consensus       191 ~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~  252 (363)
                      ....                 .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+..........
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  260 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM  260 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH
Confidence            0000                 00112236778999999999999999999999999999999 99999876654444444


Q ss_pred             hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          253 MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.....+......+.    .+.+++.+||+.||.+|||+.+++++|+.
T Consensus       261 ~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          261 IKEGFRMLSPEHAPA----EMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             HHHTCCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hccCCCCCCcccCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            444444433344444    49999999999999999999999999864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.98  E-value=3.5e-33  Score=253.83  Aligned_cols=201  Identities=21%  Similarity=0.395  Sum_probs=153.0

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP---EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|...+.||+|+||+||+|... |..||||.+.....   ....+.+.+|+.++..++||||+++++++...+ .++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            367899999999999999999975 88999999865432   223567899999999999999999999988766 8999


Q ss_pred             EEccCCCChhhhhhhc------------------------c----CCCC-------------------ceeE--------
Q 048684          171 LELSPHGSLASLLYAK------------------------W----LPDK-------------------WTHH--------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~------------------------~----~~~~-------------------~~~~--------  195 (363)
                      |||+++|+|.+++...                        .    ...+                   ....        
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence            9999999998876311                        1    0000                   0000        


Q ss_pred             -----EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          196 -----IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                           ......||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.......+...........+...+..  
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  242 (271)
T 3dtc_A          165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEP--  242 (271)
T ss_dssp             -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHH--
T ss_pred             ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHH--
Confidence                 0112358999999999999999999999999999999999999998876655555444444444444444544  


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                        +.+++..||+.||.+|||+.+++++|+.
T Consensus       243 --~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          243 --FAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             --HHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             --HHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence              9999999999999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.98  E-value=8.4e-33  Score=259.39  Aligned_cols=200  Identities=20%  Similarity=0.269  Sum_probs=155.5

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ..++|...+.||+|+||.||+|.. .+|+.||||.+.... .....+.+.+|+.+++.++||||+++++++.... .++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            347899999999999999999995 679999999996543 3344678899999999999999999999987766 8999


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCceeE--------------EEee
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWTHH--------------IVSK  199 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~--------------~~~~  199 (363)
                      |||+++|+|.+++....                                     +.......              ....
T Consensus        93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  172 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA  172 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred             EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence            99999999998874110                                     00000000              1123


Q ss_pred             cccccCCCCchhhccCCCC-ccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIAD-EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|+|||++.+..++ .++|||||||++|||+||+.||.+...............  .++...+.    .+.+++.
T Consensus       173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~s~----~~~~li~  246 (328)
T 3fe3_A          173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMST----DCENLLK  246 (328)
T ss_dssp             TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCH----HHHHHHH
T ss_pred             ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCH----HHHHHHH
Confidence            4699999999999888765 899999999999999999999988765544443333322  22233344    4899999


Q ss_pred             HccccCCCCCCCHHHHHHHhh
Q 048684          279 ACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.+|||+.+++++-+
T Consensus       247 ~~L~~dP~~R~t~~eil~h~~  267 (328)
T 3fe3_A          247 RFLVLNPIKRGTLEQIMKDRW  267 (328)
T ss_dssp             HHCCSSTTTSCCHHHHTTCTT
T ss_pred             HHCCCChhHCcCHHHHhcCHh
Confidence            999999999999999998643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.98  E-value=1.3e-32  Score=255.54  Aligned_cols=211  Identities=22%  Similarity=0.358  Sum_probs=163.2

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEE
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMI  159 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~  159 (363)
                      ....+....++|.+.+.||+|+||+||+|..      .+++.||||.+.........+.+.+|+.++.++ +||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            4445555678999999999999999999974      346889999998766555567899999999999 699999999


Q ss_pred             EEEEcCC--eEEEEEccCCCChhhhhhhccCC------------------------------------------------
Q 048684          160 GYGVEGG--MHLILELSPHGSLASLLYAKWLP------------------------------------------------  189 (363)
Q Consensus       160 ~~~~~~~--~~lv~E~~~~gsL~~~l~~~~~~------------------------------------------------  189 (363)
                      +++...+  .++||||+++|+|.+++......                                                
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~  177 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  177 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence            9887643  89999999999998887432100                                                


Q ss_pred             -----CC-----------------ceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhh
Q 048684          190 -----DK-----------------WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKS  246 (363)
Q Consensus       190 -----~~-----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~  246 (363)
                           ..                 ..........||+.|+|||++.+..++.++|||||||++|||+| |..||.+....
T Consensus       178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence                 00                 00001112347788999999999999999999999999999998 99999876544


Q ss_pred             HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          247 LVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ......+.....+..+...+..    +.+++..||+.||.+|||+.+++++|+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~----l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          258 EEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhccCccCCCCCCCCHH----HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            4444444444434444444544    89999999999999999999999998653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.98  E-value=3.2e-33  Score=262.75  Aligned_cols=206  Identities=23%  Similarity=0.343  Sum_probs=159.3

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG  165 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  165 (363)
                      ....++|...+.||+|+||.||+|...      +++.||||.+...........|.+|+.++.+++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            344678999999999999999999863      35889999998766555677899999999999999999999998776


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc-------------------------CCC-----------------------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKW-------------------------LPD-----------------------------  190 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~-------------------------~~~-----------------------------  190 (363)
                      . .++||||+++|+|.+++....                         ++.                             
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  202 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  202 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence            5 899999999999998875311                         000                             


Q ss_pred             -------Ccee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchh
Q 048684          191 -------KWTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQK  245 (363)
Q Consensus       191 -------~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~  245 (363)
                             ....                 .......||+.|+|||++.+..++.++|||||||++|||+| |..||.+...
T Consensus       203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  282 (343)
T 1luf_A          203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH  282 (343)
T ss_dssp             GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence                   0000                 00112347888999999999999999999999999999999 9999987655


Q ss_pred             hHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          246 SLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      ........... .+..+..++.    .+.+++..||+.||.+|||+.++++.|+...
T Consensus       283 ~~~~~~~~~~~-~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          283 EEVIYYVRDGN-ILACPENCPL----ELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHTTC-CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHhCCC-cCCCCCCCCH----HHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            44433332222 2223333444    4999999999999999999999999997654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.98  E-value=1.3e-32  Score=262.64  Aligned_cols=201  Identities=23%  Similarity=0.353  Sum_probs=151.2

Q ss_pred             CCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||+||+|...    ++..||||.+.........+.|.+|+.++.+++|||||++++++.+.. .++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            57999999999999999999853    577899999987655556778999999999999999999999988765 8999


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeEE----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHHI----------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~----------------  196 (363)
                      ||||++|+|.+++....                                      +.......+                
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  204 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA  204 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccc
Confidence            99999999998874210                                      000000000                


Q ss_pred             --EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 --VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 --~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                        .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||............... .........+    ..+
T Consensus       205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-~~~~~~~~~~----~~l  279 (373)
T 2qol_A          205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCP----AAL  279 (373)
T ss_dssp             ---------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-EECCCCTTCB----HHH
T ss_pred             eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccc----HHH
Confidence              011134678999999999999999999999999999998 99999876554433332222 2222222333    449


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+++..||+.||.+||++.+|++.|+..
T Consensus       280 ~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          280 YQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999999988654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.98  E-value=2.7e-33  Score=274.11  Aligned_cols=205  Identities=20%  Similarity=0.314  Sum_probs=159.6

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEE
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL  169 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~l  169 (363)
                      .+....++|...+.||+|+||+||+|...++..||||.+.....  ..+.|.+|+.+|..++|||||++++++.....++
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~l  259 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYI  259 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEE
Confidence            34455678999999999999999999988888999999986543  2578999999999999999999999998777999


Q ss_pred             EEEccCCCChhhhhhhc---cC------------------------------------CCCceeEEE-------------
Q 048684          170 ILELSPHGSLASLLYAK---WL------------------------------------PDKWTHHIV-------------  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~---~~------------------------------------~~~~~~~~~-------------  197 (363)
                      |||||++|+|.+++...   .+                                    .......+.             
T Consensus       260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence            99999999999988521   00                                    000000000             


Q ss_pred             ---eecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          198 ---SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 ---~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                         ....+|+.|+|||++....++.++|||||||+||||+| |+.||.+.......... ........+..++.    .+
T Consensus       340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~----~l  414 (454)
T 1qcf_A          340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPE----EL  414 (454)
T ss_dssp             HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HHTCCCCCCTTSCH----HH
T ss_pred             eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCH----HH
Confidence               11235678999999999999999999999999999999 99999876554443332 22222222333444    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+|+.+||+.||.+|||+.+|++.|+..
T Consensus       415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          415 YNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            9999999999999999999999998754

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.98  E-value=4e-33  Score=265.47  Aligned_cols=203  Identities=27%  Similarity=0.369  Sum_probs=157.2

Q ss_pred             cCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .++|.+.+.||+|+||+||+|.+.      ++..||||.+...........+.+|+.++.+++|||||++++++.... .
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367889999999999999999842      467899999976655555678999999999999999999999988765 8


Q ss_pred             EEEEEccCCCChhhhhhhccC--------------------------------------------C---CCceeEE----
Q 048684          168 HLILELSPHGSLASLLYAKWL--------------------------------------------P---DKWTHHI----  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~--------------------------------------------~---~~~~~~~----  196 (363)
                      ++|||||++|+|.+++.....                                            .   ......+    
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence            999999999999988753210                                            0   0000000    


Q ss_pred             -------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          197 -------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       197 -------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                   .....||+.|+|||++.+..++.++|||||||++|||+| |..||............... ..+..+
T Consensus       230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-~~~~~~  308 (367)
T 3l9p_A          230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-GRMDPP  308 (367)
T ss_dssp             HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCCC
T ss_pred             cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCC
Confidence                         011246889999999999999999999999999999998 99999876654443333222 222333


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      ...+.    .+.+|+..||+.||.+|||+.+|++.|+...
T Consensus       309 ~~~~~----~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          309 KNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            33444    4899999999999999999999999987543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.98  E-value=8.6e-33  Score=258.66  Aligned_cols=201  Identities=20%  Similarity=0.289  Sum_probs=148.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+.........+.+.+|+.++..++|||||++++++.++. .++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            6899999999999999999985 4799999999975544444567889999999999999999999988776 7899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCC---------Cce--------eEEEee
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPD---------KWT--------HHIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~---------~~~--------~~~~~~  199 (363)
                      |++|+|.+++....                                     +..         ...        ......
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  166 (323)
T 3tki_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  166 (323)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred             CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence            99999988874110                                     000         000        011224


Q ss_pred             cccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|+|||++.+..+ +.++|||||||++|+|+||+.||....................   .........+.+|+.
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~  243 (323)
T 3tki_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLALLH  243 (323)
T ss_dssp             CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS---TTGGGSCHHHHHHHH
T ss_pred             CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC---CccccCCHHHHHHHH
Confidence            579999999999988775 7899999999999999999999987554333222222111110   011223344889999


Q ss_pred             HccccCCCCCCCHHHHHHHhh
Q 048684          279 ACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.+|||+.|++++-+
T Consensus       244 ~~L~~dP~~R~t~~eil~h~~  264 (323)
T 3tki_A          244 KILVENPSARITIPDIKKDRW  264 (323)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTT
T ss_pred             HHccCChhhCcCHHHHhhChh
Confidence            999999999999999998654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.98  E-value=3.4e-32  Score=247.05  Aligned_cols=201  Identities=18%  Similarity=0.277  Sum_probs=155.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .++|...+.||+|+||+||+|...++..||||.+......  ...+.+|+.++.+++||||+++++++.+.. .++||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            4678899999999999999999888889999999765433  367899999999999999999999987765 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCcee----------------EEEee
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTH----------------HIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~----------------~~~~~  199 (363)
                      +++|+|.+++....                                      +......                .....
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence            99999998874210                                      0000000                01112


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..||+.|+|||++.+..++.++|||||||++|||+| |+.||.............. ......+...+.    .+.+++.
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~l~~li~  239 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-GHRLYRPHLASD----TIYQIMY  239 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCCCCTTSCH----HHHHHHH
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHc-CCCCCCCCcChH----HHHHHHH
Confidence            235677999999999899999999999999999999 9999987655443333222 222222233344    4899999


Q ss_pred             HccccCCCCCCCHHHHHHHhhcCh
Q 048684          279 ACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      .||+.||.+|||+.++++.|+...
T Consensus       240 ~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          240 SCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             HHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999999997653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.98  E-value=1.5e-32  Score=257.33  Aligned_cols=201  Identities=21%  Similarity=0.354  Sum_probs=147.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcE----EEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~----vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||+|+||+||+|.. .+|..    ||+|.+.........+.|.+|+.++.+++|||||++++++..+..++|
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            5688999999999999999985 44543    688888655444456789999999999999999999999999889999


Q ss_pred             EEccCCCChhhhhhhccCCC-------------------------------------------------------CceeE
Q 048684          171 LELSPHGSLASLLYAKWLPD-------------------------------------------------------KWTHH  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~~~-------------------------------------------------------~~~~~  195 (363)
                      +||+++|+|.+++.......                                                       .....
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  174 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  174 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence            99999999998875211000                                                       00000


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.......... ........+...+    ..+.
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~  249 (327)
T 3poz_A          175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICT----IDVY  249 (327)
T ss_dssp             -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCCCCCCTTBC----HHHH
T ss_pred             cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-HcCCCCCCCccCC----HHHH
Confidence            1112346889999999999999999999999999999999 99999876544433222 2222222223334    4499


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++.+||+.||.+|||+.+++++|+..
T Consensus       250 ~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          250 MIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999988654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.98  E-value=1.6e-32  Score=252.35  Aligned_cols=205  Identities=21%  Similarity=0.385  Sum_probs=151.8

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      ..++|.+.+.||+|+||+||+|...  ..||||.+.... .....+.|.+|+.+++.++||||+++++++.....++|||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e   99 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   99 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence            3468999999999999999999864  359999997544 3445678999999999999999999999988888999999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCce-----------------eEEE
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWT-----------------HHIV  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~-----------------~~~~  197 (363)
                      |+++|+|.+++....                                      +.....                 ....
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF  179 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence            999999988773110                                      000000                 0111


Q ss_pred             eecccccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh-hhcCCcCCCCCCHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK-ELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l  273 (363)
                      ....||+.|+|||++.   +..++.++|||||||++|||++|+.||............+. ....+.+. ......+..+
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l  258 (289)
T 3og7_A          180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS-KVRSNCPKRM  258 (289)
T ss_dssp             ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTT-SSCTTSCHHH
T ss_pred             cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchh-hccccCCHHH
Confidence            2346899999999996   66789999999999999999999999987544333333322 22222221 1222334459


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+++..||+.||.+|||+.++++.|+..
T Consensus       259 ~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          259 KRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            9999999999999999999999998654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.98  E-value=6e-32  Score=249.44  Aligned_cols=206  Identities=20%  Similarity=0.270  Sum_probs=153.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|.+.+.||+|+||+||+|.. .+|..||||.+....  .....+.|.+|+.++.+++||||+++++++...+ .++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            36799999999999999999985 568999999985432  3445678999999999999999999999988766 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCce----------------eEEE
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWT----------------HHIV  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~----------------~~~~  197 (363)
                      |||+++|+|.+++....                                     +.....                ....
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT  169 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence            99999999998874110                                     000000                0112


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||+||+.||.+..........+...... .........+..+.+++
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li  248 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSNVI  248 (294)
T ss_dssp             -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHHHH
T ss_pred             CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHHHH
Confidence            23469999999999999999999999999999999999999998876544444433332221 11111222334599999


Q ss_pred             HHccccCCCCCC-CHHHHHHHhhcC
Q 048684          278 SACINQTSACRP-QMSKVVQALRGD  301 (363)
Q Consensus       278 ~~cl~~dP~~RP-t~~evl~~L~~~  301 (363)
                      .+||+.||.+|| ++.++.+.|...
T Consensus       249 ~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          249 LRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             HHHhcCCHhHccccHHHHHHHHHHH
Confidence            999999999998 788888877543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.98  E-value=2.4e-32  Score=266.39  Aligned_cols=203  Identities=18%  Similarity=0.201  Sum_probs=154.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||+|.+.... .......+.+|+.+++.++|||||++++++.+.+ .++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            46799999999999999999984 679999999997654 2334567899999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhc-------------------------------cCCCCc---------ee---------------EE
Q 048684          172 ELSPHGSLASLLYAK-------------------------------WLPDKW---------TH---------------HI  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------~~~~~~---------~~---------------~~  196 (363)
                      |||++|+|.+++...                               ..+...         ..               ..
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence            999999998776411                               001000         00               01


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+...............+...  ......+..+.+|
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~s~~~~~l  247 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS--PEWDTVTPEAKDL  247 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT--TTTTTSCHHHHHH
T ss_pred             eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCc--cccccCCHHHHHH
Confidence            12357999999999999999999999999999999999999999877655444444333332211  1112233459999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhh
Q 048684          277 ASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +..||+.||.+|||+.+++++-+
T Consensus       248 i~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          248 INKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             HHHHSCSSTTTSCCHHHHHHSCT
T ss_pred             HHHHcCCChhHCCCHHHHhcCcc
Confidence            99999999999999999998643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=1.7e-32  Score=260.51  Aligned_cols=204  Identities=20%  Similarity=0.208  Sum_probs=154.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .+.|.+.+.||+|+||+||+|.. .+|+.||||.+......     .....+.+|+.++..++|||||++++++.+.. .
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46799999999999999999985 56999999999754321     13567899999999999999999999888766 8


Q ss_pred             EEEEEccCCCChhhhhhhc-------------------------------------cCCCCc----eeE-----------
Q 048684          168 HLILELSPHGSLASLLYAK-------------------------------------WLPDKW----THH-----------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~----~~~-----------  195 (363)
                      ++|||||++|+|.+++...                                     .+....    ...           
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence            9999999999999887410                                     010110    000           


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                         .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+...............+  +........+..
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~  248 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTSEL  248 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCHH
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCCHH
Confidence               112356999999999999999999999999999999999999999876654443333222211  110011122345


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+++..||..||.+|||+.+++++-+.
T Consensus       249 ~~~li~~~L~~dP~~R~t~~e~l~hp~~  276 (361)
T 2yab_A          249 AKDFIRKLLVKETRKRLTIQEALRHPWI  276 (361)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence            8999999999999999999999986543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=2.5e-32  Score=255.89  Aligned_cols=206  Identities=21%  Similarity=0.332  Sum_probs=159.4

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc-CC-----cEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEc
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE-DG-----QFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVE  164 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g-----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  164 (363)
                      ....++|...+.||+|+||+||+|... +|     ..||||.+...........+.+|+.++..+ +||||+++++++..
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            344578999999999999999999853 23     479999998766555577899999999999 89999999999887


Q ss_pred             CC-eEEEEEccCCCChhhhhhhcc---------------C------------------------------CCCc------
Q 048684          165 GG-MHLILELSPHGSLASLLYAKW---------------L------------------------------PDKW------  192 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~---------------~------------------------------~~~~------  192 (363)
                      .+ .++||||+++|+|.+++....               +                              +...      
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH  201 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC
Confidence            65 899999999999988774210               0                              0000      


Q ss_pred             -----------------eeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhh
Q 048684          193 -----------------THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMK  254 (363)
Q Consensus       193 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~  254 (363)
                                       .........||+.|+|||++.+..++.++|||||||++|||+| |..||.+............
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  281 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK  281 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence                             0001112336778999999999999999999999999999999 9999987655444444444


Q ss_pred             hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ....+..+...+.    .+.+++..||+.||.+|||+.+|++.|+..
T Consensus       282 ~~~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          282 DGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HTCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCH----HHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            4444433333444    489999999999999999999999998654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=6.2e-32  Score=247.17  Aligned_cols=204  Identities=22%  Similarity=0.317  Sum_probs=155.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      .++|...+.||+|+||+||+|....    +..||||.+.........+.|.+|+.++..++||||+++++++.++..++|
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            4679999999999999999998532    346999999876555557889999999999999999999999988889999


Q ss_pred             EEccCCCChhhhhhhcc---------------------------CCCC-----------cee----------------EE
Q 048684          171 LELSPHGSLASLLYAKW---------------------------LPDK-----------WTH----------------HI  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---------------------------~~~~-----------~~~----------------~~  196 (363)
                      |||+++|+|.+++....                           ...+           ...                ..
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence            99999999998874210                           0000           000                00


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....||+.|+|||++.+..++.++|||||||++|||+| |+.||........... +.....+..+...+..    +.+
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----l~~  245 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LEKGDRLPKPDLCPPV----LYT  245 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HHHTCCCCCCTTCCHH----HHH
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-HhcCCCCCCCCCCCHH----HHH
Confidence            112346788999999999999999999999999999998 9999976544333222 2222222233334444    999


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          276 IASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      ++.+||+.||.+|||+.++++.|+....
T Consensus       246 li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          246 LMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999976543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=2e-32  Score=260.30  Aligned_cols=201  Identities=18%  Similarity=0.221  Sum_probs=154.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||.+.... .......+.+|+.++..++|||||++++++.+.. .++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46799999999999999999985 568999999997543 3344678999999999999999999999888766 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCC---ceeE--------------EE
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDK---WTHH--------------IV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~---~~~~--------------~~  197 (363)
                      |||++|+|.+++....                                     +...   ....              ..
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence            9999999987663110                                     0000   0000              11


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+...............+.  +.......+..+.+|+
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~li  265 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAKSLI  265 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTGGGGSCHHHHHHH
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CcccccCCCHHHHHHH
Confidence            23579999999999999999999999999999999999999998766544433333332221  1111122344589999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||+.||.+|||+.+++++
T Consensus       266 ~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          266 DSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHcCCChhhCcCHHHHhcC
Confidence            99999999999999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=2.5e-32  Score=251.51  Aligned_cols=202  Identities=22%  Similarity=0.330  Sum_probs=150.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---CCe
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~  167 (363)
                      ++|++.+.||+|+||+||+|.+     .+|+.||||.+.... ....+.|.+|+.++.+++||||+++++++..   ...
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            5788999999999999999984     358899999997654 3346789999999999999999999998864   337


Q ss_pred             EEEEEccCCCChhhhhhhcc--CC------------------------------C------Ccee---------------
Q 048684          168 HLILELSPHGSLASLLYAKW--LP------------------------------D------KWTH---------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~~------------------------------~------~~~~---------------  194 (363)
                      ++||||+++|+|.+++....  ++                              .      ....               
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence            99999999999998874210  00                              0      0000               


Q ss_pred             ---EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH---------------HHhhhhh
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM---------------WSSMKEL  256 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~---------------~~~~~~~  256 (363)
                         .......||+.|+|||++.+..++.++|||||||++|||+||..||.........               ...+...
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  248 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence               0111224677799999999999999999999999999999999998764322111               1111222


Q ss_pred             cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      .....+..++    ..+.+++..||+.||.+|||+.++++.|+...
T Consensus       249 ~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          249 GRLPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             CCCCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcCCCCcCcC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            2222233344    44999999999999999999999999986543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=4.4e-32  Score=248.34  Aligned_cols=202  Identities=21%  Similarity=0.299  Sum_probs=154.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      .++|.+.+.||+|+||+||+|...    .+..||||.+.........+.|.+|+.++.+++||||+++++++.++..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            467899999999999999999853    2567999999876656667789999999999999999999999987779999


Q ss_pred             EEccCCCChhhhhhhccCCC--------------------------------------Ccee----------------EE
Q 048684          171 LELSPHGSLASLLYAKWLPD--------------------------------------KWTH----------------HI  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~~~--------------------------------------~~~~----------------~~  196 (363)
                      |||+++|+|.+++.......                                      ....                ..
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  173 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  173 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccc
Confidence            99999999998875211000                                      0000                00


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+............. ..+..+...+.    .+.+
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~----~l~~  248 (281)
T 1mp8_A          174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLPMPPNCPP----TLYS  248 (281)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCCCCCTTCCH----HHHH
T ss_pred             cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-CCCCCCCCCCH----HHHH
Confidence            112246778999999999999999999999999999997 99999876544433322222 22223333444    4899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          276 IASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ++..||+.||.+|||+.++++.|+..
T Consensus       249 li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          249 LMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999998654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=6.1e-33  Score=254.03  Aligned_cols=201  Identities=18%  Similarity=0.315  Sum_probs=152.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ..++|...+.||+|+||+||+|...++..||||.+......  ...+.+|+.++.+++||||+++++++.+.. .++|||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            34678999999999999999999888889999999865433  367899999999999999999999988765 899999


Q ss_pred             ccCCCChhhhhhhcc--C------------------------------------CCCceeEEE----------------e
Q 048684          173 LSPHGSLASLLYAKW--L------------------------------------PDKWTHHIV----------------S  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--~------------------------------------~~~~~~~~~----------------~  198 (363)
                      |+++|+|.+++....  +                                    .......+.                .
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (283)
T 3gen_A          100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  179 (283)
T ss_dssp             CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence            999999998875210  0                                    000000000                0


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...||+.|+|||++.+..++.++|||||||++|||+| |+.||........... +........+...+.    .+.+++
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l~~li  254 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHLASE----KVYTIM  254 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTTCCCCCCTTCCH----HHHHHH
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-HhcccCCCCCCcCCH----HHHHHH
Confidence            1236678999999999999999999999999999998 9999987655443333 233333333333444    489999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhcC
Q 048684          278 SACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..||+.||.+|||+.+++++|...
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          255 YSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999998643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=2.8e-32  Score=256.73  Aligned_cols=199  Identities=16%  Similarity=0.227  Sum_probs=154.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++.... .++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5789999999999999999985 569999999996432  1223567889999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~~  199 (363)
                      ||+++|+|.+++....                                     +.....               ......
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  164 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  164 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccc
Confidence            9999999987764110                                     000000               011234


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++...+.    .+.+++.+
T Consensus       165 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~~li~~  238 (337)
T 1o6l_A          165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSP----EAKSLLAG  238 (337)
T ss_dssp             CEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCH----HHHHHHHH
T ss_pred             cccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCH----HHHHHHHH
Confidence            579999999999999999999999999999999999999998766544443333322  223333444    48999999


Q ss_pred             ccccCCCCCC-----CHHHHHHHhhc
Q 048684          280 CINQTSACRP-----QMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RP-----t~~evl~~L~~  300 (363)
                      ||+.||.+||     ++.+++++-..
T Consensus       239 lL~~dP~~R~g~~~~~~~ei~~h~~f  264 (337)
T 1o6l_A          239 LLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             HTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             HhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence            9999999999     89999986443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=2.1e-32  Score=253.83  Aligned_cols=202  Identities=23%  Similarity=0.345  Sum_probs=156.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      ..++|.+.+.||+|+||.||+|..      .++..||||.+.........+.+.+|+.++..++|||||++++++.+.+ 
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            456899999999999999999985      2357899999987665566788999999999999999999999887765 


Q ss_pred             eEEEEEccCCCChhhhhhhccC-------------------------C--------------------------------
Q 048684          167 MHLILELSPHGSLASLLYAKWL-------------------------P--------------------------------  189 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~-------------------------~--------------------------------  189 (363)
                      .++||||+++|+|.+++.....                         +                                
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  180 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN  180 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence            8999999999999988753210                         0                                


Q ss_pred             ----CCceeE-----------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhH
Q 048684          190 ----DKWTHH-----------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSL  247 (363)
Q Consensus       190 ----~~~~~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~  247 (363)
                          ......                 ......||+.|+|||++.+..++.++|||||||++|||+| |..||.+.....
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                000000                 0011236778999999999999999999999999999999 999998765443


Q ss_pred             HHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          248 VMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .. ..+.....+..+...+.    .+.+++.+||+.||.+|||+.++++.|+.
T Consensus       261 ~~-~~~~~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          261 LF-NLLKTGHRMERPDNCSE----EMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             HH-HHHHTTCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHhhcCCcCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            33 22223223333334444    49999999999999999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=9.6e-33  Score=254.84  Aligned_cols=199  Identities=17%  Similarity=0.253  Sum_probs=144.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-------------------------hHHHHHHHHHHHHH
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-------------------------EMTTDYLSELGIIV  148 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-------------------------~~~~~~~~E~~~l~  148 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+......                         ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            36899999999999999999985 56899999998654311                         12356889999999


Q ss_pred             hCCCCCcceEEEEEEcC---CeEEEEEccCCCChhhhhhhcc------------------------------------CC
Q 048684          149 HVDHPNIAKMIGYGVEG---GMHLILELSPHGSLASLLYAKW------------------------------------LP  189 (363)
Q Consensus       149 ~l~H~niv~l~~~~~~~---~~~lv~E~~~~gsL~~~l~~~~------------------------------------~~  189 (363)
                      +++||||+++++++.+.   ..++||||+++|+|.+++....                                    +.
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  171 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG  171 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence            99999999999998752   2789999999999877643110                                    00


Q ss_pred             CCce---------------eEEEeecccccCCCCchhhccCC---CCccceEEechhHHHHHHhCCCCCCCchhhHHHHH
Q 048684          190 DKWT---------------HHIVSKIEGTFGYLPPEFFMHGI---ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS  251 (363)
Q Consensus       190 ~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~  251 (363)
                      ....               ........||+.|+|||++.+..   ++.++|||||||++|||++|+.||...........
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~  251 (298)
T 2zv2_A          172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK  251 (298)
T ss_dssp             TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHH
Confidence            0000               01123456999999999997765   48899999999999999999999987654433322


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..............+.    .+.+++.+||+.||.+|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          252 IKSQALEFPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHCCCCCCSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HhcccCCCCCccccCH----HHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            2222222111223344    49999999999999999999999864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.4e-32  Score=246.87  Aligned_cols=202  Identities=23%  Similarity=0.327  Sum_probs=155.0

Q ss_pred             CCCccCC-cccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEE
Q 048684           96 DNFSHEN-LIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLIL  171 (363)
Q Consensus        96 ~~f~~~~-~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~  171 (363)
                      ++|.+.+ .||+|+||+||+|...   ++..||||.+.........+.+.+|+.++..++||||+++++++..+..++||
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~   88 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   88 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEE
Confidence            4566655 8999999999999753   57889999998766555678899999999999999999999999777799999


Q ss_pred             EccCCCChhhhhhhcc--C------------------------------CC------Ccee------------------E
Q 048684          172 ELSPHGSLASLLYAKW--L------------------------------PD------KWTH------------------H  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--~------------------------------~~------~~~~------------------~  195 (363)
                      ||+++|+|.+++....  +                              +.      ....                  .
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  168 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  168 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence            9999999998874110  0                              00      0000                  0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.......... .+.....+..+...+.    .+.
T Consensus       169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~----~l~  243 (287)
T 1u59_A          169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-FIEQGKRMECPPECPP----ELY  243 (287)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH-HHHTTCCCCCCTTCCH----HHH
T ss_pred             ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-HHhcCCcCCCCCCcCH----HHH
Confidence            0111235788999999998899999999999999999999 999998765443332 2222222333334444    499


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      +++..||+.||.+||++.+++++|+...
T Consensus       244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          244 ALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999987543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=1.9e-32  Score=255.33  Aligned_cols=204  Identities=19%  Similarity=0.267  Sum_probs=153.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC---eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~lv~  171 (363)
                      ++|.+.++||+|+||+||+|.. .+|+.||||.+...........+.+|+.++.+++||||+++++++....   .++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            5788999999999999999985 4589999999975443344678889999999999999999999887543   68999


Q ss_pred             EccCCCChhhhhhhcc----C----------------------------------------CCCceeEE-----------
Q 048684          172 ELSPHGSLASLLYAKW----L----------------------------------------PDKWTHHI-----------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~----~----------------------------------------~~~~~~~~-----------  196 (363)
                      ||+++|+|.+++....    +                                        .......+           
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~  168 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence            9999999988875211    0                                        00000000           


Q ss_pred             ---EeecccccCCCCchhhc--------cCCCCccceEEechhHHHHHHhCCCCCCCchh----hHHHHHhhhhhcC---
Q 048684          197 ---VSKIEGTFGYLPPEFFM--------HGIADEKTDVYAYGVLLLEIITGRQALDSSQK----SLVMWSSMKELVD---  258 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~----~~~~~~~~~~~~~---  258 (363)
                         .....||+.|+|||++.        +..++.++|||||||++|||+||+.||.....    .............   
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~  248 (319)
T 4euu_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI  248 (319)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred             CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence               11235899999999986        57899999999999999999999999964321    2222222222111   


Q ss_pred             ----------------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 ----------------PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 ----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                      ..............+.+++..||+.||.+|||+.|++++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                            11122355677888999999999999999999999998875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=3.4e-32  Score=266.15  Aligned_cols=204  Identities=21%  Similarity=0.286  Sum_probs=156.6

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      +....++|...+.||+|+||+||+|...++..||||.+......  .+.|.+|+.+|++++|||||++++++.+...++|
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv  256 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV  256 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEE
Confidence            34455778889999999999999999887788999999865432  4689999999999999999999999988779999


Q ss_pred             EEccCCCChhhhhhhcc---CC------------------------------------CCcee----------------E
Q 048684          171 LELSPHGSLASLLYAKW---LP------------------------------------DKWTH----------------H  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---~~------------------------------------~~~~~----------------~  195 (363)
                      ||||++|+|.+++....   ++                                    .....                .
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence            99999999998875210   00                                    00000                0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......+++.|+|||++.+..++.++|||||||++|||+| |+.||.+.......... ........+..++.    .+.
T Consensus       337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~----~l~  411 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE----SLH  411 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTSCH----HHH
T ss_pred             cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCH----HHH
Confidence            0112246778999999999999999999999999999999 99999876544433322 22222222333444    489


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +|+.+||+.||.+|||+.+|++.|+..
T Consensus       412 ~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          412 DLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=2e-32  Score=260.11  Aligned_cols=202  Identities=18%  Similarity=0.248  Sum_probs=143.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|...+.||+|+||+||++.. .+|+.||||.+......  ...+.+|+.+++.++|||||++++++.... .++|||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            46899999999999999999995 47999999999765432  356889999999999999999999988766 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCCCc----------------eeEEEee
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPDKW----------------THHIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~~~----------------~~~~~~~  199 (363)
                      ||++|+|.+++...                                     .+....                .......
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~  176 (361)
T 3uc3_A           97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS  176 (361)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCC
Confidence            99999998876310                                     000000                0011223


Q ss_pred             cccccCCCCchhhccCCCCcc-ceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEK-TDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~-sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+..........+................+..+.+|+.
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  256 (361)
T 3uc3_A          177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLIS  256 (361)
T ss_dssp             ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHH
T ss_pred             CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHH
Confidence            469999999999988887665 8999999999999999999986543222222222222211111111112344899999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      +||+.||.+|||+.+++++-
T Consensus       257 ~~L~~dP~~Rps~~ell~hp  276 (361)
T 3uc3_A          257 RIFVADPATRISIPEIKTHS  276 (361)
T ss_dssp             HHSCSCTTTSCCHHHHHTSH
T ss_pred             HHccCChhHCcCHHHHHhCc
Confidence            99999999999999999853

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.7e-32  Score=262.53  Aligned_cols=203  Identities=22%  Similarity=0.360  Sum_probs=157.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc--------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEc
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE--------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVE  164 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  164 (363)
                      ..++|.+.+.||+|+||+||+|...        .+..||||++...........+.+|+.++.++ +|||||++++++..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3468999999999999999999842        23579999998766666678899999999999 89999999999887


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccC-----------------C------------------------------------C
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWL-----------------P------------------------------------D  190 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~-----------------~------------------------------------~  190 (363)
                      .+ .++||||+++|+|.+++.....                 +                                    .
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  226 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence            65 8999999999999988753210                 0                                    0


Q ss_pred             CceeE-----------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHh
Q 048684          191 KWTHH-----------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSS  252 (363)
Q Consensus       191 ~~~~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~  252 (363)
                      .....                 ......||+.|+|||++.+..++.++|||||||++|||+| |..||.+....... ..
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~-~~  305 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KL  305 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-HH
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HH
Confidence            00000                 0111236788999999999999999999999999999999 99999876544333 23


Q ss_pred             hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          253 MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.....+..+...+.+    +.+++..||+.||.+|||+.+|++.|+..
T Consensus       306 ~~~~~~~~~~~~~~~~----l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          306 LKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             HHTTCCCCCCSSCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCccCCHH----HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3333333333444544    99999999999999999999999998654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.97  E-value=7.2e-32  Score=247.36  Aligned_cols=201  Identities=28%  Similarity=0.444  Sum_probs=151.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchh------HHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEE------MTTDYLSELGIIVHVDHPNIAKMIGYGVEGGM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  167 (363)
                      .++|...+.||+|+||+||+|.. .+++.||||.+.......      ..+.+.+|+.++.+++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36899999999999999999985 578999999986543221      1167899999999999999999999986654 


Q ss_pred             EEEEEccCCCChhhhhhhc-----------------------------cCCCC-----------c-----eeE-------
Q 048684          168 HLILELSPHGSLASLLYAK-----------------------------WLPDK-----------W-----THH-------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~-----------------------------~~~~~-----------~-----~~~-------  195 (363)
                      ++||||+++|+|.+++...                             ....+           .     ...       
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~  176 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS  176 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence            7999999999997776311                             00000           0     000       


Q ss_pred             -----EEeecccccCCCCchhhc--cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH--HHhhhhhcCCcCCCCCC
Q 048684          196 -----IVSKIEGTFGYLPPEFFM--HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM--WSSMKELVDPTLGDAYN  266 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~--~~~~~~~~~~~~~~~~~  266 (363)
                           ......||+.|+|||++.  ...++.++|||||||++|||++|+.||.........  .........+.++...+
T Consensus       177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (287)
T 4f0f_A          177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP  256 (287)
T ss_dssp             BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSC
T ss_pred             ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccC
Confidence                 012346899999999994  456899999999999999999999999865433321  12223333444444444


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .    .+.+++..||+.||.+|||+.++++.|+.
T Consensus       257 ~----~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          257 P----RLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             H----HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             H----HHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            4    49999999999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=6.7e-33  Score=259.08  Aligned_cols=204  Identities=22%  Similarity=0.276  Sum_probs=149.1

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~l  169 (363)
                      .++|...++||+|+||+||+|... |+.||||.+....  .....+..|+.++.+++|||||++++++....     +++
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            368999999999999999999875 8999999996543  22455667999999999999999999887643     589


Q ss_pred             EEEccCCCChhhhhhhccCC-------------------CC-----------ce----------------eEE-------
Q 048684          170 ILELSPHGSLASLLYAKWLP-------------------DK-----------WT----------------HHI-------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~~-------------------~~-----------~~----------------~~~-------  196 (363)
                      |||||++|+|.+++....++                   ..           ..                ..+       
T Consensus       100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            99999999999887522110                   00           00                000       


Q ss_pred             ----------EeecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhh---------------
Q 048684          197 ----------VSKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKS---------------  246 (363)
Q Consensus       197 ----------~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---------------  246 (363)
                                ....+||+.|+|||++.+     ..++.++|||||||++|||+||+.||.+....               
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence                      111358999999999986     35678999999999999999999999753210               


Q ss_pred             -HHHHHhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          247 -LVMWSSMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       247 -~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                       ............+.+...+ .......+.+|+.+||+.||.+|||+.+|++.|+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             0111111222223222211 223556799999999999999999999999998654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=9.7e-32  Score=250.70  Aligned_cols=205  Identities=18%  Similarity=0.285  Sum_probs=153.9

Q ss_pred             CccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---CeEE
Q 048684           98 FSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GMHL  169 (363)
Q Consensus        98 f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~l  169 (363)
                      |...+.||+|+||+||++.+     .+|+.||||.+...........+.+|+.++.+++||||+++++++.+.   ..++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            48889999999999998864     258899999998766556677899999999999999999999988864   2789


Q ss_pred             EEEccCCCChhhhhhhccCC------------------------------------CCce------------------eE
Q 048684          170 ILELSPHGSLASLLYAKWLP------------------------------------DKWT------------------HH  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~~------------------------------------~~~~------------------~~  195 (363)
                      ||||+++|+|.+++....++                                    ....                  ..
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~  192 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR  192 (318)
T ss_dssp             EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred             EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence            99999999999887521100                                    0000                  01


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--------------HHHhhhhhcCCcC
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--------------MWSSMKELVDPTL  261 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--------------~~~~~~~~~~~~~  261 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||+||..||........              ....+........
T Consensus       193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (318)
T 3lxp_A          193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR  272 (318)
T ss_dssp             C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCC
T ss_pred             cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCC
Confidence            12233577889999999999999999999999999999999999976432211              1111222222223


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChHHHH
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALA  306 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~  306 (363)
                      +..++    ..+.+|+..||+.||.+|||+.++++.|+...+.+.
T Consensus       273 ~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          273 PDKCP----AEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             Ccccc----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            33344    449999999999999999999999999976554443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.7e-32  Score=253.45  Aligned_cols=200  Identities=13%  Similarity=0.110  Sum_probs=153.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||+|.+....  .....+.+|+.++..++|||||++++++.+.. .++|||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            46899999999999999999985 568999999997543  23467889999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCC--Ccee--------------EEEe
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPD--KWTH--------------HIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~--~~~~--------------~~~~  198 (363)
                      ||++|+|.+++....                                      +..  ....              ....
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~  161 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence            999999988774210                                      000  0000              1123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||.+..................  .......+..+.+++.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~s~~~~~li~  239 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD--EEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--HHHHTTSCHHHHHHHH
T ss_pred             cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC--hhhhccCCHHHHHHHH
Confidence            35699999999999998899999999999999999999999987665544433333322211  0000122345899999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      +||+.||.+|||+.+++++-
T Consensus       240 ~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          240 RLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSH
T ss_pred             HHcCCChhHCcCHHHHhcCh
Confidence            99999999999999999854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=2.9e-32  Score=255.02  Aligned_cols=201  Identities=18%  Similarity=0.269  Sum_probs=150.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcE----EEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~----vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||+|+||+||+|.. .+|..    ||+|.+...........+.+|+.++..++|||||++++++.....++|
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   92 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV   92 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence            5788999999999999999985 44544    888887654433334567899999999999999999999988889999


Q ss_pred             EEccCCCChhhhhhhc--cCCCC-----------------------------------------------------ceeE
Q 048684          171 LELSPHGSLASLLYAK--WLPDK-----------------------------------------------------WTHH  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~--~~~~~-----------------------------------------------------~~~~  195 (363)
                      |||+++|+|.+++...  .++..                                                     ....
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  172 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL  172 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence            9999999998887421  00000                                                     0001


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.......... .....+..+...+.    .+.
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~  247 (325)
T 3kex_A          173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL-EKGERLAQPQICTI----DVY  247 (325)
T ss_dssp             C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH-HTTCBCCCCTTBCT----TTT
T ss_pred             cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH-HcCCCCCCCCcCcH----HHH
Confidence            1123457889999999999999999999999999999999 99999876544333222 22222222222333    388


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++..||+.||.+|||+.+++++|+..
T Consensus       248 ~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          248 MVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=8e-32  Score=246.06  Aligned_cols=201  Identities=21%  Similarity=0.336  Sum_probs=155.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEc
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILEL  173 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~  173 (363)
                      ..++|...+.||+|+||+||+|...++..||||.+......  .+.+.+|+.++..++||||+++++++.++..++||||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   88 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEec
Confidence            34678999999999999999999888889999999765432  4689999999999999999999999988889999999


Q ss_pred             cCCCChhhhhhhc---cC------------------------------------CCCceeE----------------EEe
Q 048684          174 SPHGSLASLLYAK---WL------------------------------------PDKWTHH----------------IVS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~---~~------------------------------------~~~~~~~----------------~~~  198 (363)
                      +++|+|.+++...   .+                                    .......                ...
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence            9999999887411   00                                    0000000                011


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...||+.|+|||++.+..++.++|||||||++|||+| |+.||.+......... +.....+..+...+.    .+.+++
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l~~li  243 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-LERGYRMVRPDNCPE----ELYQLM  243 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCH----HHHHHH
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH-HhcccCCCCcccccH----HHHHHH
Confidence            1236778999999998999999999999999999999 9999987654433322 222223333333444    499999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhcC
Q 048684          278 SACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..||+.||.+|||+.++++.|+..
T Consensus       244 ~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          244 RLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhccChhhCCCHHHHHHHHHHH
Confidence            999999999999999999988653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=1.4e-31  Score=261.63  Aligned_cols=198  Identities=21%  Similarity=0.338  Sum_probs=153.3

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~  171 (363)
                      ..++|...+.||+|+||+||+|... |+.||||.++...   ..+.|.+|+.+|.+++|||||++++++...  ..++||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            3467888999999999999999985 7899999997654   246899999999999999999999987754  489999


Q ss_pred             EccCCCChhhhhhhccC---C------------------------------------CCceeE------------EEeec
Q 048684          172 ELSPHGSLASLLYAKWL---P------------------------------------DKWTHH------------IVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~---~------------------------------------~~~~~~------------~~~~~  200 (363)
                      |||++|+|.+++.....   +                                    ......            .....
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  346 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  346 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence            99999999988852210   0                                    000000            01122


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+++.|+|||++.+..++.++|||||||++|||+| |+.||........... +.....+..+..++..    +.+|+..
T Consensus       347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~p~~~~~~----l~~li~~  421 (450)
T 1k9a_A          347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPA----VYDVMKN  421 (450)
T ss_dssp             CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH-HHTTCCCCCCTTCCHH----HHHHHHH
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCcCCHH----HHHHHHH
Confidence            47789999999999999999999999999999999 9999987654433322 2222333333444444    9999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||+.||.+|||+.++++.|+.
T Consensus       422 cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          422 CWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHHHHH
Confidence            999999999999999998864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=4.5e-32  Score=252.80  Aligned_cols=207  Identities=22%  Similarity=0.378  Sum_probs=158.2

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV  163 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~  163 (363)
                      ++....++|...+.||+|+||+||+|...      ++..||||.+...........|.+|+.++..++||||+++++++.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   98 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   98 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence            34455678999999999999999999743      378899999986655555678999999999999999999999987


Q ss_pred             cCC-eEEEEEccCCCChhhhhhhcc-----------------------------------------------CCCCceeE
Q 048684          164 EGG-MHLILELSPHGSLASLLYAKW-----------------------------------------------LPDKWTHH  195 (363)
Q Consensus       164 ~~~-~~lv~E~~~~gsL~~~l~~~~-----------------------------------------------~~~~~~~~  195 (363)
                      +.. .++||||+++|+|.+++....                                               +.......
T Consensus        99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~k  178 (322)
T 1p4o_A           99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  178 (322)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred             cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEE
Confidence            765 899999999999998874210                                               00000000


Q ss_pred             E-----------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhc
Q 048684          196 I-----------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       196 ~-----------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~  257 (363)
                      +                 .....||+.|+|||++.+..++.++|||||||++|||+| |..||.................
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  258 (322)
T 1p4o_A          179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL  258 (322)
T ss_dssp             ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred             ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc
Confidence            0                 011236788999999999999999999999999999999 8999987654433333222222


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                       +......+.    .+.+++..||+.||.+|||+.++++.|+..
T Consensus       259 -~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          259 -LDKPDNCPD----MLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             -CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             -CCCCCCCCH----HHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence             222233444    489999999999999999999999999754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=269.39  Aligned_cols=199  Identities=23%  Similarity=0.323  Sum_probs=150.4

Q ss_pred             CCccCC-cccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           97 NFSHEN-LIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        97 ~f~~~~-~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      ++...+ .||+|+||.||+|.+.   ++..||||.+.........+.|.+|+.+|.+++|||||++++++.....++|||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E  415 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME  415 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEE
Confidence            344444 7999999999999853   466799999986654445688999999999999999999999998888999999


Q ss_pred             ccCCCChhhhhhhcc---------------------------CCC-----------Ccee------------------EE
Q 048684          173 LSPHGSLASLLYAKW---------------------------LPD-----------KWTH------------------HI  196 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------------~~~-----------~~~~------------------~~  196 (363)
                      ||++|+|.+++....                           +..           ....                  ..
T Consensus       416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  495 (613)
T 2ozo_A          416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA  495 (613)
T ss_dssp             CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred             eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence            999999998874110                           000           0000                  00


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....+|+.|+|||++.+..++.++|||||||+||||+| |+.||.+.......... ........+..++.    .+.+
T Consensus       496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~----~l~~  570 (613)
T 2ozo_A          496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPP----ELYA  570 (613)
T ss_dssp             ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH-HTTCCCCCCTTCCH----HHHH
T ss_pred             ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCH----HHHH
Confidence            011235678999999999999999999999999999998 99999876554433322 22222333333444    4999


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhc
Q 048684          276 IASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      |+..||+.||.+||++.+|++.|+.
T Consensus       571 li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          571 LMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHH
Confidence            9999999999999999999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=1.2e-31  Score=265.19  Aligned_cols=202  Identities=22%  Similarity=0.335  Sum_probs=155.6

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...++|...+.||+|+||.||+|.+. ++..||||.+......  .+.|.+|+.+|.+++|||||++++++.... .++|
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            34567888899999999999999965 4889999999765432  578999999999999999999999988765 8999


Q ss_pred             EEccCCCChhhhhhhcc---CC------------------------------------CCcee----------------E
Q 048684          171 LELSPHGSLASLLYAKW---LP------------------------------------DKWTH----------------H  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~---~~------------------------------------~~~~~----------------~  195 (363)
                      ||||++|+|.+++....   ++                                    .....                .
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence            99999999999885210   00                                    00000                0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......+++.|+|||++....++.++|||||||+||||+| |..||.+........ .+........+..++.    .+.
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~l~  449 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPE----KVY  449 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHHTTCCCCCCTTCCH----HHH
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCCCCCCCCCH----HHH
Confidence            0111235678999999999999999999999999999999 999998765443332 2233333333333444    499


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +|+.+||+.||.+|||+.+|++.|+..
T Consensus       450 ~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          450 ELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=6e-32  Score=255.67  Aligned_cols=201  Identities=19%  Similarity=0.240  Sum_probs=143.3

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..+.|.+.+.||+|+||+||+|... +++.||||.+....   ..+.+.+|+.++.+++|||||++++++.... .++||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            4567999999999999999999964 58899999997543   2356889999999999999999999988766 88999


Q ss_pred             EccCCCChhhhhhhc-------------------------------------cCCC---Ccee--------------EEE
Q 048684          172 ELSPHGSLASLLYAK-------------------------------------WLPD---KWTH--------------HIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------------~~~~---~~~~--------------~~~  197 (363)
                      ||+++|+|.+++...                                     .+..   ....              ...
T Consensus       128 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~  207 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM  207 (349)
T ss_dssp             CCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence            999999998876411                                     0000   0000              012


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|..||............+...... ............+.+|+
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~li  286 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-FISPWWDEVSLNAKDLV  286 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC-CCTTTTTTSCHHHHHHH
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc-cCCchhhhCCHHHHHHH
Confidence            23569999999999999999999999999999999999999998765444333332221111 11112223344599999


Q ss_pred             HHccccCCCCCCCHHHHHHHh
Q 048684          278 SACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+||+.||.+|||+.+++++-
T Consensus       287 ~~~L~~dP~~Rpt~~e~l~hp  307 (349)
T 2w4o_A          287 RKLIVLDPKKRLTTFQALQHP  307 (349)
T ss_dssp             HTTSCSSGGGSCCHHHHHHST
T ss_pred             HHHccCChhhCcCHHHHhcCc
Confidence            999999999999999999853

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=4.3e-32  Score=245.93  Aligned_cols=199  Identities=21%  Similarity=0.369  Sum_probs=154.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|...+.||+|+||.||+|...++..||||.+......  .+.+.+|+.++..++||||+++++++.+.+ .++||||+
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            578889999999999999999888889999999865433  367899999999999999999999988765 89999999


Q ss_pred             CCCChhhhhhhcc--CCC------------------------------------CceeEE----------------Eeec
Q 048684          175 PHGSLASLLYAKW--LPD------------------------------------KWTHHI----------------VSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--~~~------------------------------------~~~~~~----------------~~~~  200 (363)
                      ++|+|.+++....  ++.                                    .....+                ....
T Consensus        86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  165 (267)
T 3t9t_A           86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  165 (267)
T ss_dssp             TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence            9999998875211  000                                    000000                0112


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .||+.|+|||++.+..++.++|||||||++|+|++ |+.||............ .....+..+...+.    .+.+++.+
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~----~l~~li~~  240 (267)
T 3t9t_A          166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAST----HVYQIMNH  240 (267)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTSCH----HHHHHHHH
T ss_pred             cccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH-hcCCcCCCCccCcH----HHHHHHHH
Confidence            36678999999999999999999999999999999 89999876544433322 22222222333444    48999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhcC
Q 048684          280 CINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ||+.||.+|||+.++++.|+..
T Consensus       241 ~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          241 CWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HccCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999998643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.9e-31  Score=247.64  Aligned_cols=197  Identities=25%  Similarity=0.459  Sum_probs=149.4

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSP  175 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~  175 (363)
                      ++|...+.||+|+||+||+|... ++.||||.+...   ...+.|.+|+.++.+++|||||++++++.+ ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN-PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CcEEEEEcCC
Confidence            56888899999999999999985 788999998643   235789999999999999999999998764 4889999999


Q ss_pred             CCChhhhhhhcc-----------------------CC----CCcee-----------------E------------EEee
Q 048684          176 HGSLASLLYAKW-----------------------LP----DKWTH-----------------H------------IVSK  199 (363)
Q Consensus       176 ~gsL~~~l~~~~-----------------------~~----~~~~~-----------------~------------~~~~  199 (363)
                      +|+|.+++....                       +.    ....|                 .            ....
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~  162 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN  162 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccccc
Confidence            999988774110                       00    00000                 0            0112


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh--HHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS--LVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ..||+.|+|||++.+..++.++|||||||++|||+||+.||......  ...+.... ...+......+..    +.+++
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----l~~li  237 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-GTRPPLIKNLPKP----IESLM  237 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-TCCCCCBTTCCHH----HHHHH
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-CCCCCcccccCHH----HHHHH
Confidence            35899999999999999999999999999999999999999754322  22222222 2223333334444    89999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhcCh
Q 048684          278 SACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      .+||+.||.+|||+.++++.|+...
T Consensus       238 ~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          238 TRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             HHHhcCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999986543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=6.6e-32  Score=252.22  Aligned_cols=198  Identities=19%  Similarity=0.248  Sum_probs=153.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||+||++.. .+|+.||||.+.....  ......+.+|+.++..++|||||++++++.+.. .++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5789999999999999999985 5799999999864321  123467889999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCcee------------EEEeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTH------------HIVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~------------~~~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +......            ......+|
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g  165 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  165 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence            9999999998874110                                     0000000            01124579


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++..++.    .+.+++.+||+
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~----~~~~li~~lL~  239 (318)
T 1fot_A          166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNE----DVKDLLSRLIT  239 (318)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCTTSCH----HHHHHHHHHTC
T ss_pred             CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCH----HHHHHHHHHhc
Confidence            999999999999999999999999999999999999998766544444433332  223333444    49999999999


Q ss_pred             cCCCCCC-----CHHHHHHHhh
Q 048684          283 QTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       283 ~dP~~RP-----t~~evl~~L~  299 (363)
                      .||.+||     ++.+++++-.
T Consensus       240 ~dp~~R~~~~~~~~~~i~~hp~  261 (318)
T 1fot_A          240 RDLSQRLGNLQNGTEDVKNHPW  261 (318)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGG
T ss_pred             cCHHHcCCCcCCCHHHHhcCcc
Confidence            9999999     8999987644

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.4e-31  Score=254.87  Aligned_cols=201  Identities=16%  Similarity=0.158  Sum_probs=153.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||+|.+...... ....+.+|+.++..++|||||++++++.+.. .++|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL-DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh-hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            36799999999999999999985 56899999999765433 3467899999999999999999999888766 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CC--CCcee--------------EEEe
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LP--DKWTH--------------HIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~--~~~~~--------------~~~~  198 (363)
                      ||++|+|.+++....                                      +.  .....              ....
T Consensus       129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  208 (387)
T 1kob_A          129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  208 (387)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence            999999988774110                                      00  00000              0112


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++.+..++.++|||||||++|||+||..||.+................  .........+..+.+++.
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~  286 (387)
T 1kob_A          209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE--FDEDAFSSVSPEAKDFIK  286 (387)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC--CCSSTTTTSCHHHHHHHH
T ss_pred             eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCccccccCCHHHHHHHH
Confidence            346999999999999999999999999999999999999999876544333322222111  111111223345999999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      .||+.||.+|||+.+++++-
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp  306 (387)
T 1kob_A          287 NLLQKEPRKRLTVHDALEHP  306 (387)
T ss_dssp             TTSCSSGGGSCCHHHHHTST
T ss_pred             HHcCCChhHCcCHHHHhhCc
Confidence            99999999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.4e-31  Score=249.11  Aligned_cols=203  Identities=20%  Similarity=0.218  Sum_probs=152.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      +.|...+.||+|+||+||+|.. .+|..||||.+......     .....+.+|+.++..++|||||++++++.... .+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4688999999999999999985 56899999998754321     13567999999999999999999999888766 89


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------------cCCCCc----eeE------------
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------------WLPDKW----THH------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~----~~~------------  195 (363)
                      +|||||++|+|.+++...                                     .+....    ...            
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence            999999999999887410                                     000000    000            


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                        .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+...............  ..........+..+
T Consensus       171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  248 (326)
T 2y0a_A          171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSALA  248 (326)
T ss_dssp             TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCHHH
T ss_pred             CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCHHH
Confidence              01234699999999999999999999999999999999999999987654433332222111  11110111123458


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+++..||+.||.+|||+.+++++-..
T Consensus       249 ~~li~~~L~~dP~~Rpt~~e~l~hp~~  275 (326)
T 2y0a_A          249 KDFIRRLLVKDPKKRMTIQDSLQHPWI  275 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCCCc
Confidence            899999999999999999999986544

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=1.8e-31  Score=250.43  Aligned_cols=203  Identities=21%  Similarity=0.371  Sum_probs=155.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE--------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL--------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~--------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      .++|.+.+.||+|+||+||+|..        .++..||||.+...........+.+|+.++.++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            46899999999999999999985        246789999998766555678899999999999 899999999998876


Q ss_pred             C-eEEEEEccCCCChhhhhhhccCC-----------------------------------------------------CC
Q 048684          166 G-MHLILELSPHGSLASLLYAKWLP-----------------------------------------------------DK  191 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~~~-----------------------------------------------------~~  191 (363)
                      + .++||||+++|+|.+++......                                                     ..
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  193 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  193 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC
Confidence            5 89999999999999887532100                                                     00


Q ss_pred             cee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhh
Q 048684          192 WTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSM  253 (363)
Q Consensus       192 ~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~  253 (363)
                      ...                 .......||+.|+|||++.+..++.++|||||||++|||+| |..||.+........ .+
T Consensus       194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~~  272 (334)
T 2pvf_A          194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LL  272 (334)
T ss_dssp             CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-HH
T ss_pred             CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH-HH
Confidence            000                 00111236778999999999999999999999999999999 999998765443332 22


Q ss_pred             hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      .....+..+..++.    .+.+++..||+.||.+|||+.++++.|+...
T Consensus       273 ~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          273 KEGHRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHTCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            22222333334444    4999999999999999999999999987543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=6.8e-32  Score=255.71  Aligned_cols=199  Identities=18%  Similarity=0.298  Sum_probs=150.9

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~l  169 (363)
                      .++|+..++||+|+||+||+|.. .+|+.||||.+....  .......+..|+.++..+ +|||||++++++.+.. .|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            47899999999999999999985 568999999997432  122356788999999988 6999999999888766 899


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------CCCC---------------ceeEEE
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------LPDK---------------WTHHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------~~~~---------------~~~~~~  197 (363)
                      |||||++|+|.+++....                                     +...               ......
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  181 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT  181 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccc
Confidence            999999999988774100                                     0000               011123


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+...............  .++...+.    .+.+++
T Consensus       182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~----~~~~li  255 (353)
T 3txo_A          182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--VYPTWLHE----DATGIL  255 (353)
T ss_dssp             ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCH----HHHHHH
T ss_pred             cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCH----HHHHHH
Confidence            346799999999999999999999999999999999999999988766554444433322  22233444    489999


Q ss_pred             HHccccCCCCCCCH------HHHHHHhh
Q 048684          278 SACINQTSACRPQM------SKVVQALR  299 (363)
Q Consensus       278 ~~cl~~dP~~RPt~------~evl~~L~  299 (363)
                      ..||+.||.+||++      .+++++-.
T Consensus       256 ~~lL~~dP~~R~~~~~~~~~~~il~hp~  283 (353)
T 3txo_A          256 KSFMTKNPTMRLGSLTQGGEHAILRHPF  283 (353)
T ss_dssp             HHHTCSSGGGSTTSGGGTCTHHHHTSGG
T ss_pred             HHHhhhCHHHccCCcccCCHHHHhhCCc
Confidence            99999999999998      78887543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.5e-31  Score=250.61  Aligned_cols=200  Identities=19%  Similarity=0.293  Sum_probs=146.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCC--CCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDH--PNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~-~~lv  170 (363)
                      .+.|.+.+.||+|+||+||++...+++.||||.+.... .......+.+|+.++.+++|  |||+++++++.... .++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            35799999999999999999998889999999997543 34446789999999999986  99999999988776 7899


Q ss_pred             EEccCCCChhhhhhhcc--------------------------CCC---------------------------CceeEEE
Q 048684          171 LELSPHGSLASLLYAKW--------------------------LPD---------------------------KWTHHIV  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------~~~---------------------------~~~~~~~  197 (363)
                      || +.+|+|.+++....                          +..                           .......
T Consensus        88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~  166 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVK  166 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC---------
T ss_pred             Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccC
Confidence            99 56789988774110                          000                           0000112


Q ss_pred             eecccccCCCCchhhcc-----------CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCC
Q 048684          198 SKIEGTFGYLPPEFFMH-----------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAY  265 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~  265 (363)
                      ...+||+.|+|||++.+           ..++.++|||||||++|||++|+.||.......... ..+........+...
T Consensus       167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T 3dbq_A          167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP  246 (343)
T ss_dssp             ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCS
T ss_pred             CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccC
Confidence            24569999999999965           678999999999999999999999998643332221 122222222223333


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +    ..+.+++..||+.||.+|||+.+++++.+
T Consensus       247 ~----~~l~~li~~~L~~dp~~Rpt~~e~l~hp~  276 (343)
T 3dbq_A          247 E----KDLQDVLKCCLKRDPKQRISIPELLAHPY  276 (343)
T ss_dssp             C----HHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             C----HHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence            3    34899999999999999999999997643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=1.5e-31  Score=252.91  Aligned_cols=199  Identities=20%  Similarity=0.318  Sum_probs=149.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +.|...+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++.+++|||||++++++.... .++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588889999999999999985 679999999997543  2334567999999999999999999999887766 88999


Q ss_pred             EccCCCChhhhhhhcc---------------------------C-----------CCCceeE-----------EEeeccc
Q 048684          172 ELSPHGSLASLLYAKW---------------------------L-----------PDKWTHH-----------IVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---------------------------~-----------~~~~~~~-----------~~~~~~g  202 (363)
                      ||+. |+|.+++....                           .           .......           .....+|
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g  212 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  212 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence            9998 57776653100                           0           0000000           0123469


Q ss_pred             ccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          203 TFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       203 t~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      |+.|+|||++.   .+.++.++|||||||++|||+||+.||........................++.    .+.+++..
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~li~~  288 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDS  288 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCH----HHHHHHHH
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH----HHHHHHHH
Confidence            99999999985   567999999999999999999999999876544443333333222222233444    48899999


Q ss_pred             ccccCCCCCCCHHHHHHHhh
Q 048684          280 CINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~  299 (363)
                      ||+.||.+|||+.+++++..
T Consensus       289 ~l~~dP~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          289 CLQKIPQDRPTSEVLLKHRF  308 (348)
T ss_dssp             HTCSSGGGSCCHHHHTTCHH
T ss_pred             HcccChhhCcCHHHHhhChh
Confidence            99999999999999997543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=7.9e-32  Score=254.99  Aligned_cols=198  Identities=18%  Similarity=0.197  Sum_probs=153.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++..++|||||++++++.+.. .|+||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5799999999999999999995 569999999986432  1123567889999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE------------EEeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH------------IVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~------------~~~~~~g  202 (363)
                      ||+++|+|.+++....                                     +.......            .....+|
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~g  200 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG  200 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccC
Confidence            9999999988875210                                     00000000            1124579


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++..++.    .+.+++.+||+
T Consensus       201 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~----~~~~li~~lL~  274 (350)
T 1rdq_E          201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSS----DLKDLLRNLLQ  274 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTCCH----HHHHHHHHHSC
T ss_pred             CccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCH----HHHHHHHHHhh
Confidence            999999999999999999999999999999999999998766544443333332  233333444    49999999999


Q ss_pred             cCCCCCCC-----HHHHHHHhh
Q 048684          283 QTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       283 ~dP~~RPt-----~~evl~~L~  299 (363)
                      .||.+||+     +.+++++-.
T Consensus       275 ~dp~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          275 VDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGG
T ss_pred             cCHHhccCCccCCHHHHHhCcC
Confidence            99999998     899987644

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=1.6e-31  Score=249.98  Aligned_cols=202  Identities=26%  Similarity=0.363  Sum_probs=153.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      .++|.+.+.||+|+||+||+|..      .++..||||.+...........+.+|+.++.+++||||+++++++.... .
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            36799999999999999999983      3477899999976655555678999999999999999999999988765 8


Q ss_pred             EEEEEccCCCChhhhhhhccC--------------------------------------------C---CCceeEE----
Q 048684          168 HLILELSPHGSLASLLYAKWL--------------------------------------------P---DKWTHHI----  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~--------------------------------------------~---~~~~~~~----  196 (363)
                      ++||||+++|+|.+++.....                                            .   ......+    
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg  188 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG  188 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence            999999999999988753210                                            0   0000000    


Q ss_pred             -------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          197 -------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       197 -------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                   .....||+.|+|||++.+..++.++|||||||++|||+| |..||............ .....+...
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~  267 (327)
T 2yfx_A          189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMDPP  267 (327)
T ss_dssp             HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCCCCCC
T ss_pred             cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH-hcCCCCCCC
Confidence                         012346889999999999999999999999999999998 99999876544333222 222223333


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..++.    .+.+++..||+.||.+|||+.+++++|+..
T Consensus       268 ~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          268 KNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            33444    489999999999999999999999998654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=1.3e-31  Score=245.57  Aligned_cols=202  Identities=22%  Similarity=0.324  Sum_probs=155.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..++|...+.||+|+||+||+|... ++..||||.+.....  ..+.+.+|+.++..++||||+++++++.+.. .++||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            4568999999999999999999964 588999999976543  3578999999999999999999999988765 89999


Q ss_pred             EccCCCChhhhhhhcc---C-------------------------C-----------CCc----------------eeEE
Q 048684          172 ELSPHGSLASLLYAKW---L-------------------------P-----------DKW----------------THHI  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---~-------------------------~-----------~~~----------------~~~~  196 (363)
                      ||+++|+|.+++....   +                         .           ...                ....
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  168 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  168 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence            9999999998874210   0                         0           000                0011


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....||+.|+|||++.+..++.++|||||||++|+|++ |..||........... +.....+..+...+.    .+.+
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l~~  243 (288)
T 3kfa_A          169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE----KVYE  243 (288)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHTTCCCCCCTTCCH----HHHH
T ss_pred             ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HhccCCCCCCCCCCH----HHHH
Confidence            112346778999999999999999999999999999999 9999987654433322 222223333333444    4999


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          276 IASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                      ++..||+.||.+|||+.++++.|+...
T Consensus       244 li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          244 LMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999987543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=9.8e-32  Score=257.57  Aligned_cols=204  Identities=17%  Similarity=0.303  Sum_probs=148.8

Q ss_pred             cCCCccCCccccc--CceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQG--GYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G--~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      .++|++.+.||+|  +||+||+|.. .+|+.||||.+.... .......+.+|+.+++.++|||||++++++.+.+ .++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3679999999999  9999999996 479999999997543 3344677889999999999999999999888766 899


Q ss_pred             EEEccCCCChhhhhhhcc---------------------------------------CCCCceeEE--------------
Q 048684          170 ILELSPHGSLASLLYAKW---------------------------------------LPDKWTHHI--------------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~~--------------  196 (363)
                      |||||++|+|.+++....                                       +.......+              
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~  183 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ  183 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence            999999999998874210                                       000000000              


Q ss_pred             --------EeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc------
Q 048684          197 --------VSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT------  260 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~------  260 (363)
                              ....+||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+..........+.......      
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (389)
T 3gni_B          184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI  263 (389)
T ss_dssp             ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred             cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence                    011268889999999987  5799999999999999999999999986543333222211111000      


Q ss_pred             ----------------------------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          261 ----------------------------------LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       261 ----------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                                        .....+......+.+|+.+||+.||.+|||+.+++++-
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp  335 (389)
T 3gni_B          264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  335 (389)
T ss_dssp             ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred             ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence                                              00011222345699999999999999999999999763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.3e-31  Score=252.02  Aligned_cols=205  Identities=18%  Similarity=0.207  Sum_probs=152.8

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG  165 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  165 (363)
                      +....++|.+.+.||+|+||+||+|.. .++..||||.+....    .....+.+.+|+.++.+++|||||++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            345567899999999999999999985 568899999986321    223467899999999999999999999998877


Q ss_pred             C-eEEEEEccCCCChhhhhhh-----------------------------------------------------------
Q 048684          166 G-MHLILELSPHGSLASLLYA-----------------------------------------------------------  185 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~-----------------------------------------------------------  185 (363)
                      . .++|||||++|+|.+++..                                                           
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            6 8899999999999876620                                                           


Q ss_pred             ------c------------cCCCCc--eeE-------------------EEeecccccCCCCchhhcc--CCCCccceEE
Q 048684          186 ------K------------WLPDKW--THH-------------------IVSKIEGTFGYLPPEFFMH--GIADEKTDVY  224 (363)
Q Consensus       186 ------~------------~~~~~~--~~~-------------------~~~~~~gt~~y~aPE~~~~--~~~~~~sDvw  224 (363)
                            .            .+....  ...                   ......||+.|+|||++.+  ..++.++|||
T Consensus       181 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence                  0            000000  000                   1223468999999999975  6789999999


Q ss_pred             echhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          225 AYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       225 S~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ||||++|||++|+.||.+...................  .........+.+++..||+.||.+|||+.+++++
T Consensus       261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN--PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS--GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC--cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            9999999999999999877655544444433322111  1111233459999999999999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=4.7e-33  Score=268.57  Aligned_cols=209  Identities=17%  Similarity=0.235  Sum_probs=157.9

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      +.++....++|...++||+|+||+||+|.. .+|+.||||++.....  ......+.+|+.++..++|||||++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            344555678999999999999999999995 4689999999864211  1112357899999999999999999998887


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccCCC------------------------------------C----------------
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWLPD------------------------------------K----------------  191 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~----------------  191 (363)
                      .. .|+|||||++|+|.+++....++.                                    .                
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~  220 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  220 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence            66 899999999999988774211000                                    0                


Q ss_pred             ceeEEEeecccccCCCCchhhccCC----CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC--CCC
Q 048684          192 WTHHIVSKIEGTFGYLPPEFFMHGI----ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG--DAY  265 (363)
Q Consensus       192 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~  265 (363)
                      .........+||+.|+|||++.+..    ++.++|||||||++|||+||++||.+.+.................+  ...
T Consensus       221 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~  300 (410)
T 3v8s_A          221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI  300 (410)
T ss_dssp             TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCC
T ss_pred             CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccc
Confidence            0011223567999999999998665    8899999999999999999999998876555544444332111221  234


Q ss_pred             CHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHhhc
Q 048684          266 NTEQLTRLLLIASACINQTSAC--RPQMSKVVQALRG  300 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~L~~  300 (363)
                      +.+    +.+|+.+||..+|.+  ||++.+|+++-..
T Consensus       301 s~~----~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f  333 (410)
T 3v8s_A          301 SKE----AKNLICAFLTDREVRLGRNGVEEIKRHLFF  333 (410)
T ss_dssp             CHH----HHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred             cHH----HHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence            444    999999999999988  9999999987553

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=3.3e-31  Score=245.81  Aligned_cols=206  Identities=23%  Similarity=0.384  Sum_probs=149.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++..++||||+++++++...+ .++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            4789999999999999999985 679999999997532  3445678999999999999999999999887766 88999


Q ss_pred             EccCCCChhhhhhhc------------------------------c-----------CCCCcee---------------E
Q 048684          172 ELSPHGSLASLLYAK------------------------------W-----------LPDKWTH---------------H  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~------------------------------~-----------~~~~~~~---------------~  195 (363)
                      ||+++|+|.+++...                              .           +......               .
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~  191 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  191 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence            999999998877410                              0           0000000               0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH-HHhhhh-hcCCcCCCCCCHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM-WSSMKE-LVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l  273 (363)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....... ...+.. ...+.....++.    .+
T Consensus       192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l  267 (310)
T 2wqm_A          192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE----EL  267 (310)
T ss_dssp             -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH----HH
T ss_pred             cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH----HH
Confidence            112245899999999999999999999999999999999999999765432211 112222 112212233344    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcChHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGDEEAL  305 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~  305 (363)
                      .+++..||+.||.+|||+.+|++.|+...+..
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence            99999999999999999999999997654433

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=2.8e-31  Score=246.95  Aligned_cols=203  Identities=18%  Similarity=0.267  Sum_probs=145.7

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|...+.||+|+||+||+|...+|+.||||.+.... .......+.+|+.++.+++|||||++++++.+.. .++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            47899999999999999999998889999999997543 2334567899999999999999999999887765 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCce---------------eEEEee
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWT---------------HHIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~---------------~~~~~~  199 (363)
                      ||++ +|.+++....                                      +.....               ......
T Consensus       100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~  178 (311)
T 3niz_A          100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH  178 (311)
T ss_dssp             CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred             CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence            9985 7766553110                                      000000               011123


Q ss_pred             cccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC----------------
Q 048684          200 IEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG----------------  262 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----------------  262 (363)
                      .+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+................+...                
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (311)
T 3niz_A          179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF  258 (311)
T ss_dssp             CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred             CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence            468999999999976 568999999999999999999999998755433332222111111000                


Q ss_pred             ---CCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          263 ---DAY-----NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       263 ---~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                         ...     .+.....+.+|+.+||+.||.+|||+.+++++-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  302 (311)
T 3niz_A          259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP  302 (311)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred             ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence               000     011234588999999999999999999999753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.2e-31  Score=249.99  Aligned_cols=202  Identities=18%  Similarity=0.306  Sum_probs=134.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.+++.++|||||++++++...+ .++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46799999999999999999984 5699999999976544434567889999999999999999999988766 899999


Q ss_pred             ccCCCChhhhhhhcc-------------------------------------------CCCCceeE--------------
Q 048684          173 LSPHGSLASLLYAKW-------------------------------------------LPDKWTHH--------------  195 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~-------------------------------------------~~~~~~~~--------------  195 (363)
                      |++ |+|.+++....                                           +.......              
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            998 58877764211                                           00000000              


Q ss_pred             -EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC--------------
Q 048684          196 -IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP--------------  259 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--------------  259 (363)
                       .....+||+.|+|||++.+. .++.++|||||||++|||+||+.||.+................+              
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  242 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY  242 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence             11223689999999999764 68999999999999999999999998765443332222111000              


Q ss_pred             --cCCC----C--------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          260 --TLGD----A--------YNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       260 --~~~~----~--------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .+..    .        ........+.+++.+||+.||.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence              0000    0        000123458999999999999999999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=2.5e-31  Score=243.23  Aligned_cols=201  Identities=18%  Similarity=0.209  Sum_probs=152.9

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++.+++||||+++++++.... .++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            47899999999999999999985 568999999986443 3344678899999999999999999999988766 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CC---CCceeE--------------EE
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LP---DKWTHH--------------IV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~---~~~~~~--------------~~  197 (363)
                      ||+++|+|.+++....                                     +.   ......              ..
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence            9999999977653110                                     00   000000              01


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||......................  ........+.+++
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li  242 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP--EWDTVTPEAKSLI  242 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT--TTTTSCHHHHHHH
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCch--hhcccCHHHHHHH
Confidence            22468999999999999999999999999999999999999998766544443333332221111  1112234489999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..||+.||.+|||+.+++++
T Consensus       243 ~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          243 DSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHcccChhhCCCHHHHhcC
Confidence            99999999999999999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=2.7e-31  Score=248.83  Aligned_cols=200  Identities=22%  Similarity=0.315  Sum_probs=147.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCCc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP---EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      .++|...+.||+|+||.||++..    .+|+.||||.+.....   ......+.+|+.++..++|||||++++++...+ 
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35799999999999999999986    4689999999975431   223456889999999999999999999887765 


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------cCC------CCce---------------e
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------WLP------DKWT---------------H  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------~~~------~~~~---------------~  194 (363)
                      .++|||||++|+|.+++...                               ..+      ....               .
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence            89999999999998876410                               000      0000               0


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++...+.    .+.
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~----~~~  249 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLPPYLTQ----EAR  249 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCCCTTSCH----HHH
T ss_pred             ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCH----HHH
Confidence            11233569999999999999999999999999999999999999998766544443333322  222333444    489


Q ss_pred             HHHHHccccCCCCCC-----CHHHHHHHhhc
Q 048684          275 LIASACINQTSACRP-----QMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RP-----t~~evl~~L~~  300 (363)
                      +++.+||+.||.+||     ++.+++++-..
T Consensus       250 ~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f  280 (327)
T 3a62_A          250 DLLKKLLKRNAASRLGAGPGDAGEVQAHPFF  280 (327)
T ss_dssp             HHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred             HHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence            999999999999999     78899886443

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=5.8e-32  Score=246.83  Aligned_cols=203  Identities=22%  Similarity=0.298  Sum_probs=154.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---CCeEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGMHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~~l  169 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||+|.+.... .....+.+.+|+.++.+++||||+++++++.+   ...++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35789999999999999999985 568999999997544 34456789999999999999999999997753   23899


Q ss_pred             EEEccCCCChhhhhhhc-----------------------------------cCCCC-----------ceeEE-------
Q 048684          170 ILELSPHGSLASLLYAK-----------------------------------WLPDK-----------WTHHI-------  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~-----------------------------------~~~~~-----------~~~~~-------  196 (363)
                      ||||+++|+|.+++...                                   ....+           ....+       
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            99999999998887421                                   00000           00000       


Q ss_pred             --------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHH
Q 048684          197 --------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (363)
                              .....||+.|+|||++.+..++.++|||||||++|+|+||+.||............ .....+.++..++. 
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~-  242 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-REGKFRRIPYRYSD-  242 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHTCCCCCCTTSCH-
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHH-hhcccccCCcccCH-
Confidence                    00124899999999999999999999999999999999999999876544333222 22222333334444 


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                         .+.+++.+||+.||.+|||+.+|+++++...
T Consensus       243 ---~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          243 ---ELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             ---HHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ---HHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence               4999999999999999999999999876543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=6.2e-32  Score=249.85  Aligned_cols=198  Identities=24%  Similarity=0.386  Sum_probs=154.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.|...+.||+|+||+||+|.. .+|+.||||.+.........+.+.+|+.++..++||||+++++++.... .++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            5688899999999999999985 5689999999976554445678999999999999999999999887765 8999999


Q ss_pred             cCCCChhhhhhhccC------------------------------------CCCceeE---------------EEeeccc
Q 048684          174 SPHGSLASLLYAKWL------------------------------------PDKWTHH---------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~------------------------------------~~~~~~~---------------~~~~~~g  202 (363)
                      +++|+|.+++....+                                    .......               ......|
T Consensus       102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  181 (303)
T 3a7i_A          102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG  181 (303)
T ss_dssp             CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCS
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCC
Confidence            999999887742110                                    0000000               0123458


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||........... +.....+.+...++..    +.+++..||+
T Consensus       182 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----l~~li~~~l~  256 (303)
T 3a7i_A          182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-IPKNNPPTLEGNYSKP----LKEFVEACLN  256 (303)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCCCCCSSCCHH----HHHHHHHHCC
T ss_pred             CcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-hhcCCCCCCccccCHH----HHHHHHHHcC
Confidence            9999999999999999999999999999999999999987654333322 2223334444445554    9999999999


Q ss_pred             cCCCCCCCHHHHHHHh
Q 048684          283 QTSACRPQMSKVVQAL  298 (363)
Q Consensus       283 ~dP~~RPt~~evl~~L  298 (363)
                      .||.+|||+.+++++.
T Consensus       257 ~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          257 KEPSFRPTAKELLKHK  272 (303)
T ss_dssp             SSGGGSCCHHHHTTCH
T ss_pred             CChhhCcCHHHHhhCh
Confidence            9999999999999754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=3.6e-31  Score=254.07  Aligned_cols=199  Identities=19%  Similarity=0.305  Sum_probs=146.8

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCC--CCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVD--HPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .+|.+.+.||+|+||+||+|...+|+.||||.+.... .......+.+|+.+|.+++  |||||++++++.... .++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            3599999999999999999997779999999997543 3445678999999999996  599999999988766 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCC----------------CceeEEEe
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPD----------------KWTHHIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~----------------~~~~~~~~  198 (363)
                      | +.+|+|.+++....                                     +..                ........
T Consensus       136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~  214 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD  214 (390)
T ss_dssp             E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------C
T ss_pred             e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCC
Confidence            9 66789988774110                                     000                00001123


Q ss_pred             ecccccCCCCchhhcc-----------CCCCccceEEechhHHHHHHhCCCCCCCchhhHH-HHHhhhhhcCCcCCCCCC
Q 048684          199 KIEGTFGYLPPEFFMH-----------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV-MWSSMKELVDPTLGDAYN  266 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~  266 (363)
                      ..+||+.|+|||++.+           ..++.++|||||||++|||++|+.||........ ....+........+...+
T Consensus       215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (390)
T 2zmd_A          215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  294 (390)
T ss_dssp             CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccch
Confidence            4579999999999965           4689999999999999999999999986533222 112222222222223233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                          ..+.+|+..||+.||.+|||+.+++++.+
T Consensus       295 ----~~~~~li~~~L~~dP~~Rps~~ell~hp~  323 (390)
T 2zmd_A          295 ----KDLQDVLKCCLKRDPKQRISIPELLAHPY  323 (390)
T ss_dssp             ----HHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             ----HHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence                44899999999999999999999997543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=8.3e-32  Score=254.84  Aligned_cols=199  Identities=19%  Similarity=0.237  Sum_probs=147.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      +.|.+.+.||+|+||+||+|.. .+|+.||||.+....    .....+.+.+|+.++..++|||||++++++.+.. .++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4689999999999999999985 569999999985321    1112567899999999999999999999887766 899


Q ss_pred             EEEccCCCChhhhhhhc-----------------------------------------cCCCC-c--eeE----------
Q 048684          170 ILELSPHGSLASLLYAK-----------------------------------------WLPDK-W--THH----------  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~-----------------------------------------~~~~~-~--~~~----------  195 (363)
                      |||||++|+|.+++...                                         .+... .  ...          
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            99999999997665310                                         00000 0  000          


Q ss_pred             -----EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          196 -----IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                           .....+||+.|+|||++.+..++.++|||||||++|+|+||+.||.+..... .............  ......+
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~i~~~~~~~~~--~~~~~~s  260 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-FEGIIKGKYKMNP--RQWSHIS  260 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH-HHHHHHTCCCCCH--HHHTTSC
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH-HHHHHcCCCCCCc--cccccCC
Confidence                 1123469999999999999999999999999999999999999998754322 1122222111100  0001123


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+.+|+.+||+.||.+|||+.+++++
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            458999999999999999999999974

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=2.9e-31  Score=248.19  Aligned_cols=203  Identities=20%  Similarity=0.286  Sum_probs=151.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C-e
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--G-M  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~-~  167 (363)
                      ++|...+.||+|+||+||+|.+     .+|..||||.+..... ...+.+.+|+.++.+++||||+++++++...  . .
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            5788999999999999999984     3588999999976543 3457799999999999999999999987632  2 7


Q ss_pred             EEEEEccCCCChhhhhhhcc--CC------------------------------C------Cce----------------
Q 048684          168 HLILELSPHGSLASLLYAKW--LP------------------------------D------KWT----------------  193 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~~------------------------------~------~~~----------------  193 (363)
                      ++||||+++|+|.+++....  ++                              .      ...                
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence            89999999999998875210  00                              0      000                


Q ss_pred             --eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--------------HHHhhhhhc
Q 048684          194 --HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--------------MWSSMKELV  257 (363)
Q Consensus       194 --~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--------------~~~~~~~~~  257 (363)
                        ........||+.|+|||++.+..++.++|||||||++|+|++|..||........              ....+....
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ  261 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence              0011123477889999999999999999999999999999999999876443211              111122222


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      .+..+..++    ..+.+|+..||+.||.+|||+.+++++|+....
T Consensus       262 ~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          262 RLPAPPACP----AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             CCCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            222333344    449999999999999999999999999976543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.8e-31  Score=250.11  Aligned_cols=201  Identities=21%  Similarity=0.365  Sum_probs=153.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcE----EEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~----vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|...+.||+|+||+||+|.. .+|..    ||+|.+...........+.+|+.++..++||||+++++++..+..++|
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v   94 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence            6799999999999999999985 44543    588887655444456789999999999999999999999999889999


Q ss_pred             EEccCCCChhhhhhhccC--------------------------------CCC------c-----------------eeE
Q 048684          171 LELSPHGSLASLLYAKWL--------------------------------PDK------W-----------------THH  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~--------------------------------~~~------~-----------------~~~  195 (363)
                      +||+++|+|.+++.....                                +..      .                 ...
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~  174 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  174 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence            999999999988742100                                000      0                 000


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.......... ........+...+.    .+.
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~l~  249 (327)
T 3lzb_A          175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICTI----DVY  249 (327)
T ss_dssp             -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCCCCCCTTBCH----HHH
T ss_pred             cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCccCCH----HHH
Confidence            1112236778999999999999999999999999999999 99999876554433322 22222222333444    489


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +++..||+.||.+|||+.++++.|...
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999988654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=2.1e-31  Score=254.15  Aligned_cols=197  Identities=16%  Similarity=0.189  Sum_probs=144.3

Q ss_pred             cCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          100 HENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      ..+.||+|+||.||+|.. .+|..||||.+...... ..+.|.+|+.++.+++|||||++++++...+ .++|||||++|
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK-DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            356799999999999985 56999999999865433 3578999999999999999999999988766 89999999999


Q ss_pred             Chhhhhhhcc--------------------------------------C--CCCceeEE--------------Eeecccc
Q 048684          178 SLASLLYAKW--------------------------------------L--PDKWTHHI--------------VSKIEGT  203 (363)
Q Consensus       178 sL~~~l~~~~--------------------------------------~--~~~~~~~~--------------~~~~~gt  203 (363)
                      +|.+++....                                      +  .......+              ....+||
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt  251 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT  251 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSS
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCC
Confidence            9987764110                                      0  00000000              1123599


Q ss_pred             cCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc
Q 048684          204 FGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQ  283 (363)
Q Consensus       204 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  283 (363)
                      +.|+|||++.+..++.++|||||||++|||+||+.||.+...............+..  ..........+.+|+.+||+.
T Consensus       252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~li~~~L~~  329 (373)
T 2x4f_A          252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE--DEEFQDISEEAKEFISKLLIK  329 (373)
T ss_dssp             CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC--SGGGTTSCHHHHHHHHTTSCS
T ss_pred             CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC--hhhhccCCHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999987765444444333322211  111112234599999999999


Q ss_pred             CCCCCCCHHHHHHHhh
Q 048684          284 TSACRPQMSKVVQALR  299 (363)
Q Consensus       284 dP~~RPt~~evl~~L~  299 (363)
                      ||.+|||+.+++++-.
T Consensus       330 dp~~Rps~~e~l~hp~  345 (373)
T 2x4f_A          330 EKSWRISASEALKHPW  345 (373)
T ss_dssp             SGGGSCCHHHHHHSHH
T ss_pred             ChhhCCCHHHHhcCcC
Confidence            9999999999998543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=3.7e-32  Score=271.23  Aligned_cols=204  Identities=21%  Similarity=0.295  Sum_probs=157.5

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      +....++|.+.+.||+|+||+||+|.+.++..||||.+......  .+.|.+|+.+|++++|||||++++++.+...+||
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv  339 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV  339 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEe
Confidence            34455678889999999999999999887788999999865432  4689999999999999999999999988779999


Q ss_pred             EEccCCCChhhhhhhc---cCCC------------------------------------CceeEE---------------
Q 048684          171 LELSPHGSLASLLYAK---WLPD------------------------------------KWTHHI---------------  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~---~~~~------------------------------------~~~~~~---------------  196 (363)
                      ||||.+|+|.++|...   .+..                                    .....+               
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence            9999999999988521   0000                                    000000               


Q ss_pred             -EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          197 -VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       197 -~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                       .....+++.|+|||++....++.++|||||||+||||+| |+.||.+.......... ........+..++.    .+.
T Consensus       420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~----~l~  494 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE----SLH  494 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCH----HHH
T ss_pred             cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCH----HHH
Confidence             001235678999999999999999999999999999999 99999876544433322 22222222333444    489


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          275 LIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +|+..||+.||.+|||+.+|++.|+..
T Consensus       495 ~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          495 DLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=5e-31  Score=243.36  Aligned_cols=201  Identities=21%  Similarity=0.275  Sum_probs=147.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      ..|...+.||+|+||.||+|.+     .+|+.||||.+...........+.+|+.++..++||||+++++++...   ..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4588889999999999999984     358899999997655444467899999999999999999999988764   27


Q ss_pred             EEEEEccCCCChhhhhhhccC--------------------------------CC---------------C---------
Q 048684          168 HLILELSPHGSLASLLYAKWL--------------------------------PD---------------K---------  191 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~--------------------------------~~---------------~---------  191 (363)
                      ++||||+++|+|.+++.....                                +.               .         
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence            899999999999998731100                                00               0         


Q ss_pred             ceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh--------------HHHHHhhhhhc
Q 048684          192 WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS--------------LVMWSSMKELV  257 (363)
Q Consensus       192 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--------------~~~~~~~~~~~  257 (363)
                      ..........||..|+|||++.+..++.++|||||||++|||+||..|+......              ......+....
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK  260 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence            0001112345778899999999999999999999999999999999986533211              11111222222


Q ss_pred             CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          258 DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ....+..++    ..+.+++..||+.||.+|||+.++++.|+.
T Consensus       261 ~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          261 RLPCPPNCP----DEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             CCCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCC----HHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            223333344    449999999999999999999999999853

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=1.3e-31  Score=250.03  Aligned_cols=207  Identities=20%  Similarity=0.311  Sum_probs=147.2

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc-CCc---EEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE-DGQ---FVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG  166 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~---~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~  166 (363)
                      ....++|...+.||+|+||+||+|... ++.   .||||.+.... .....+.|.+|+.++.+++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            345578999999999999999999853 333   79999997543 2334678999999999999999999999887654


Q ss_pred             -e------EEEEEccCCCChhhhhhhcc-------------------------------------------CCCCcee--
Q 048684          167 -M------HLILELSPHGSLASLLYAKW-------------------------------------------LPDKWTH--  194 (363)
Q Consensus       167 -~------~lv~E~~~~gsL~~~l~~~~-------------------------------------------~~~~~~~--  194 (363)
                       .      ++||||+++|+|.+++....                                           +......  
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEE
Confidence             2      89999999999988874211                                           0000000  


Q ss_pred             ---------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          195 ---------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       195 ---------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                     .......||+.|+|||++.+..++.++|||||||++|||+| |..||.+.............. .
T Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~  257 (323)
T 3qup_A          179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN-R  257 (323)
T ss_dssp             CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-C
T ss_pred             eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC-C
Confidence                           00112236778999999999999999999999999999999 999998765544433332222 2


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      +......+.    .+.+++.+||+.||.+|||+.++++.|+....
T Consensus       258 ~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          258 LKQPPECME----EVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             CCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCccCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            222333444    49999999999999999999999999875433

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=8.2e-32  Score=250.30  Aligned_cols=201  Identities=20%  Similarity=0.274  Sum_probs=149.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----  166 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+....  .......|.+|+.++.+++|||||++++++....     
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46899999999999999999995 678999999997543  3344568899999999999999999999876533     


Q ss_pred             eEEEEEccCCCChhhhhhhcc--------------------------CC-----------CCce----------------
Q 048684          167 MHLILELSPHGSLASLLYAKW--------------------------LP-----------DKWT----------------  193 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~--------------------------~~-----------~~~~----------------  193 (363)
                      .++||||+++|+|.+++....                          ..           ....                
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence            389999999999998874110                          00           0000                


Q ss_pred             --eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          194 --HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       194 --~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                        .......+||+.|+|||++.+..++.++|||||||++|||+||+.||.+.......+........+..  ......+.
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  248 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS--ARHEGLSA  248 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHH--HHSTTCCH
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcc--cccCCCCH
Confidence              00112345899999999999999999999999999999999999999887665554444433222110  00111234


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+.+++.+||+.||.+||++.+++..
T Consensus       249 ~l~~li~~~l~~dP~~R~~~~~~l~~  274 (311)
T 3ork_A          249 DLDAVVLKALAKNPENRYQTAAEMRA  274 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHHHHHhcCHhhChhhHHHHHH
Confidence            48999999999999999998887754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=5.5e-31  Score=242.24  Aligned_cols=204  Identities=20%  Similarity=0.281  Sum_probs=152.2

Q ss_pred             cCCCccCC-cccccCceEEEEEEE---cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEE
Q 048684           95 TDNFSHEN-LIGQGGYAEVYKGQL---EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL  169 (363)
Q Consensus        95 ~~~f~~~~-~lG~G~fg~Vy~~~~---~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~l  169 (363)
                      .++|.+.+ .||+|+||+||+|..   .+++.||||.+..... ....+.+.+|+.++..++||||+++++++..+..++
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l   94 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML   94 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence            35677777 899999999999964   3468899999975432 334678999999999999999999999997777999


Q ss_pred             EEEccCCCChhhhhhhcc-C------------------------------CC------Cc------------------ee
Q 048684          170 ILELSPHGSLASLLYAKW-L------------------------------PD------KW------------------TH  194 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-~------------------------------~~------~~------------------~~  194 (363)
                      ||||+++|+|.+++.... +                              +.      ..                  ..
T Consensus        95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  174 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  174 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence            999999999998874210 0                              00      00                  00


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      .......||+.|+|||++.+..++.++|||||||++|||+| |+.||........... +.....+..+..++.    .+
T Consensus       175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l  249 (291)
T 1xbb_A          175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKGERMGCPAGCPR----EM  249 (291)
T ss_dssp             EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCH----HH
T ss_pred             cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCH----HH
Confidence            00111235688999999999899999999999999999999 9999987655433322 222223333334444    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      .+++..||+.||.+|||+.++++.|+..-.
T Consensus       250 ~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          250 YDLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999976543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=3.1e-31  Score=243.40  Aligned_cols=197  Identities=18%  Similarity=0.269  Sum_probs=147.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||++.. .+|..||+|.+.........+.+.+|+.++..++||||+++++++.+.. .++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4788899999999999999985 5689999999975543334678999999999999999999999988766 8899999


Q ss_pred             cCCCChhhhhhhc-----------------------------------------cC---CCCce--------------eE
Q 048684          174 SPHGSLASLLYAK-----------------------------------------WL---PDKWT--------------HH  195 (363)
Q Consensus       174 ~~~gsL~~~l~~~-----------------------------------------~~---~~~~~--------------~~  195 (363)
                      +++|+|.+++...                                         .+   .....              ..
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            9999998876310                                         00   00000              00


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC-CCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL-GDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~  274 (363)
                      .....+||+.|+|||++. +.++.++|||||||++|||++|+.||.+................... ....+    ..+.
T Consensus       182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  256 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT----PQAV  256 (285)
T ss_dssp             -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCC----HHHH
T ss_pred             cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCC----HHHH
Confidence            122346899999999985 57899999999999999999999999876544433322222111111 11233    3488


Q ss_pred             HHHHHccccCCCCCCCHHHHHHH
Q 048684          275 LIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +++..||+.||.+|||+.+++++
T Consensus       257 ~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          257 DLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=9.3e-32  Score=246.73  Aligned_cols=199  Identities=19%  Similarity=0.347  Sum_probs=146.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCC-------cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDG-------QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g-------~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      ++|...+.||+|+||+||+|.. .++       ..||+|.+..... ...+.|.+|+.++.+++||||+++++++..++ 
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            5788899999999999999984 334       4799999865433 34678999999999999999999999988765 


Q ss_pred             eEEEEEccCCCChhhhhhhcc--C------------------------------CCCce--------------eEEE---
Q 048684          167 MHLILELSPHGSLASLLYAKW--L------------------------------PDKWT--------------HHIV---  197 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~--~------------------------------~~~~~--------------~~~~---  197 (363)
                      .++||||+++|+|.+++....  +                              +....              ..+.   
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            889999999999998875211  0                              00000              0000   


Q ss_pred             --------eecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCC-CCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          198 --------SKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGR-QALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       198 --------~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                              ....||+.|+|||++.+ ..++.++|||||||++|||+||. +||......... .....  .+.++...+.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~  243 (289)
T 4fvq_A          167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYED--RHQLPAPKAA  243 (289)
T ss_dssp             SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHT--TCCCCCCSSC
T ss_pred             ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhc--cCCCCCCCCH
Confidence                    01248889999999987 67999999999999999999955 455443332221 11111  1122222232


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                          .+.+++..||+.||.+|||+.++++.|+...
T Consensus       244 ----~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          244 ----ELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             ----TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             ----HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence                3889999999999999999999999997664

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.1e-31  Score=245.82  Aligned_cols=202  Identities=25%  Similarity=0.349  Sum_probs=152.2

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC-----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED-----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ..+|...+.||+|+||+||+|....     +..||||.+...........|.+|+.++..++||||+++++++.... .+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3567888999999999999998532     24699999987655555678999999999999999999999988765 89


Q ss_pred             EEEEccCCCChhhhhhhcc--------------------------------------CCCCceeE---------------
Q 048684          169 LILELSPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------  195 (363)
                      +||||+++|+|.+++....                                      +.......               
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence            9999999999998874210                                      00000000               


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                         ......||+.|+|||++.+..++.++|||||||++|||+| |+.||............ .....+......+    .
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~----~  277 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPMDCP----S  277 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCB----H
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HCCCcCCCcccCC----H
Confidence               0111235778999999999999999999999999999999 99999876544333222 2222222223334    4


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+.+++.+||+.||.+||++.++++.|+..
T Consensus       278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          278 AIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            489999999999999999999999988643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=2.2e-31  Score=242.42  Aligned_cols=200  Identities=21%  Similarity=0.310  Sum_probs=150.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+...........+.+|+.++..++||||+++++++.+.. .++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            5788999999999999999986 4689999999975443444678999999999999999999999888766 7899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCCC---------ce--------eEEEee
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPDK---------WT--------HHIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~~---------~~--------~~~~~~  199 (363)
                      +++|+|.+++....                                     +...         ..        ......
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  166 (276)
T 2yex_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  166 (276)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred             cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccC
Confidence            99999988874110                                     0000         00        011223


Q ss_pred             cccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.........+......... ..  ........+.+++.
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~li~  243 (276)
T 2yex_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LN--PWKKIDSAPLALLH  243 (276)
T ss_dssp             CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT-ST--TGGGSCHHHHHHHH
T ss_pred             CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc-cC--chhhcCHHHHHHHH
Confidence            468999999999987765 789999999999999999999998755433222222221111 00  11123345889999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      .||+.||.+|||+.+++++-
T Consensus       244 ~~l~~~p~~Rps~~~il~~~  263 (276)
T 2yex_A          244 KILVENPSARITIPDIKKDR  263 (276)
T ss_dssp             HHSCSSTTTSCCHHHHTTCT
T ss_pred             HHCCCCchhCCCHHHHhcCc
Confidence            99999999999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=9.9e-32  Score=250.90  Aligned_cols=196  Identities=17%  Similarity=0.298  Sum_probs=144.9

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--------  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------  166 (363)
                      ++|+..+.||+|+||.||+|... +|+.||||++.........+.+.+|+.++++++|||||++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            57889999999999999999964 799999999976555555688999999999999999999999875432        


Q ss_pred             --------------------------------------------------eEEEEEccCCCChhhhhhhcc---------
Q 048684          167 --------------------------------------------------MHLILELSPHGSLASLLYAKW---------  187 (363)
Q Consensus       167 --------------------------------------------------~~lv~E~~~~gsL~~~l~~~~---------  187 (363)
                                                                        .++|||||++|+|.+++....         
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                              689999999999988764210         


Q ss_pred             -------------------------------CCCCcee---------------------------EEEeecccccCCCCc
Q 048684          188 -------------------------------LPDKWTH---------------------------HIVSKIEGTFGYLPP  209 (363)
Q Consensus       188 -------------------------------~~~~~~~---------------------------~~~~~~~gt~~y~aP  209 (363)
                                                     +......                           ......+||+.|+||
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence                                           0000000                           011224599999999


Q ss_pred             hhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 048684          210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRP  289 (363)
Q Consensus       210 E~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  289 (363)
                      |++.+..++.++|||||||++|||++|..|+....   ...........+.    ........+.+++..||+.||.+||
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp  318 (332)
T 3qd2_B          246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV---RIITDVRNLKFPL----LFTQKYPQEHMMVQDMLSPSPTERP  318 (332)
T ss_dssp             HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---HHHHHHHTTCCCH----HHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---HHHHHhhccCCCc----ccccCChhHHHHHHHHccCCCCcCC
Confidence            99999999999999999999999999987753221   1111111111111    1223445688999999999999999


Q ss_pred             CHHHHHHHh
Q 048684          290 QMSKVVQAL  298 (363)
Q Consensus       290 t~~evl~~L  298 (363)
                      |+.+++++-
T Consensus       319 s~~~~l~~~  327 (332)
T 3qd2_B          319 EATDIIENA  327 (332)
T ss_dssp             CHHHHHHST
T ss_pred             CHHHHhhch
Confidence            999999753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=8.6e-32  Score=254.18  Aligned_cols=199  Identities=17%  Similarity=0.291  Sum_probs=152.1

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-e
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~  167 (363)
                      ...++|...+.||+|+||+||+|.. .+|+.||||.+....  .......+..|..++..+ +|||||++++++.+.. .
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            3457899999999999999999996 568999999997432  112346788999999887 8999999999888766 8


Q ss_pred             EEEEEccCCCChhhhhhhc--------------------------c-----------CCCCce---------------eE
Q 048684          168 HLILELSPHGSLASLLYAK--------------------------W-----------LPDKWT---------------HH  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~--------------------------~-----------~~~~~~---------------~~  195 (363)
                      |+|||||++|+|.+++...                          .           +.....               ..
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence            9999999999998887410                          0           000000               01


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...........  .+.++...+.    .+.+
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~----~~~~  247 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEK----EAKD  247 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCH----HHHH
T ss_pred             cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCCCCcccCH----HHHH
Confidence            123457999999999999999999999999999999999999999876654443333222  2333333444    4899


Q ss_pred             HHHHccccCCCCCCCHH-HHHHH
Q 048684          276 IASACINQTSACRPQMS-KVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~-evl~~  297 (363)
                      ++.+||+.||.+||++. +++++
T Consensus       248 li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          248 LLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             HHHHHhcCCHhHcCCChHHHHcC
Confidence            99999999999999998 77754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=3.5e-31  Score=242.96  Aligned_cols=201  Identities=20%  Similarity=0.322  Sum_probs=145.6

Q ss_pred             CCCccCCcccccCceEEEEEEEc--CCc--EEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE--DGQ--FVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~--~g~--~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~l  169 (363)
                      ++|...+.||+|+||+||+|.+.  ++.  .||||.+....  .....+.+.+|+.++.+++||||+++++++.....++
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            57999999999999999999852  333  68999987543  2344678999999999999999999999999888999


Q ss_pred             EEEccCCCChhhhhhhcc--C------------------------------CC---------------Cc---------e
Q 048684          170 ILELSPHGSLASLLYAKW--L------------------------------PD---------------KW---------T  193 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~--~------------------------------~~---------------~~---------~  193 (363)
                      ||||+++|+|.+++....  +                              +.               ..         .
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  177 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  177 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence            999999999988774210  0                              00               00         0


Q ss_pred             eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          194 HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       194 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||..................+......+    ..
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  253 (291)
T 1u46_A          178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP----QD  253 (291)
T ss_dssp             EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCC----HH
T ss_pred             hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcC----HH
Confidence            001112347778999999999899999999999999999999 9999987665444433333322222233344    44


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+++..||+.||.+|||+.++++.|..
T Consensus       254 l~~li~~~l~~~p~~Rps~~~l~~~l~~  281 (291)
T 1u46_A          254 IYNVMVQCWAHKPEDRPTFVALRDFLLE  281 (291)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            9999999999999999999999998864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=2.7e-31  Score=257.23  Aligned_cols=210  Identities=17%  Similarity=0.249  Sum_probs=146.8

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-------chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-------PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      ...++|...+.||+|+||+||+|.. .+|+.||||.+....       .......+.+|+.+|.+++|||||++++++..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            4467899999999999999999985 568999999986432       11122358899999999999999999999887


Q ss_pred             CCeEEEEEccCCCChhhhhhhc-------------------------------------cCC---CCc------------
Q 048684          165 GGMHLILELSPHGSLASLLYAK-------------------------------------WLP---DKW------------  192 (363)
Q Consensus       165 ~~~~lv~E~~~~gsL~~~l~~~-------------------------------------~~~---~~~------------  192 (363)
                      ...++|||||++|+|.+++...                                     .+.   ...            
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            7799999999999998876410                                     000   000            


Q ss_pred             --eeEEEeecccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          193 --THHIVSKIEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       193 --~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                        ........+||+.|+|||++.+   ..++.++|||||||++|+|+||++||............+........+ ....
T Consensus       292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~-~~~~  370 (419)
T 3i6u_A          292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP-EVWA  370 (419)
T ss_dssp             CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH-HHHT
T ss_pred             cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc-hhhc
Confidence              0112234579999999999853   678999999999999999999999997654322222222221111000 0001


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      ..+..+.+++.+||+.||.+|||+.+++++-+....
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            123459999999999999999999999987665443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=3.6e-31  Score=243.20  Aligned_cols=202  Identities=17%  Similarity=0.244  Sum_probs=145.7

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||+|...+|+.||||.+..... ......+.+|+.++..++||||+++++++.... .++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            57889999999999999999987899999999975432 223467889999999999999999999887765 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCcee---------------EEEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWTH---------------HIVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~~---------------~~~~~~  200 (363)
                      +++ +|.+++....                                      +......               ......
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence            985 7776653110                                      0000000               011234


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC----------------CcCCC
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD----------------PTLGD  263 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~----------------~~~~~  263 (363)
                      .||+.|+|||++.+. .++.++|||||||++|||+||++||.+................                +....
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence            689999999999764 5899999999999999999999999876544333332221110                01000


Q ss_pred             -------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          264 -------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       264 -------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                             .........+.+++.+||+.||.+|||+.+++++-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  282 (288)
T 1ob3_A          241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA  282 (288)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence                   00112344588999999999999999999999753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=9.9e-32  Score=254.73  Aligned_cols=201  Identities=18%  Similarity=0.266  Sum_probs=151.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||+|.. .+|..||+|.+...........+.+|+.++..++||||+++++++..++ .++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            5799999999999999999985 4689999999987655566778999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhc---------------------------cCCC-----------CceeE-------------EEeeccc
Q 048684          174 SPHGSLASLLYAK---------------------------WLPD-----------KWTHH-------------IVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~---------------------------~~~~-----------~~~~~-------------~~~~~~g  202 (363)
                      +++|+|.+++...                           ....           .....             ......|
T Consensus       113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g  192 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG  192 (360)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CC
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCC
Confidence            9999998887421                           1000           00000             0123468


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh------------------------------
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS------------------------------  252 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~------------------------------  252 (363)
                      |+.|+|||++.+..++.++|||||||++|||+||+.||............                              
T Consensus       193 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T 3eqc_A          193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSR  272 (360)
T ss_dssp             CCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------------
T ss_pred             CCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCC
Confidence            99999999999999999999999999999999999999765432221110                              


Q ss_pred             -----------hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          253 -----------MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       253 -----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                 +.....+...   ....+..+.+|+..||+.||.+|||+.+++++-.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  327 (360)
T 3eqc_A          273 PPMAIFELLDYIVNEPPPKLP---SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF  327 (360)
T ss_dssp             -CCCHHHHHHHHHHSCCCCCC---TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred             CcccchhhhhHHhccCCCCCC---cccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence                       0011111111   1112345999999999999999999999997543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=5.7e-32  Score=263.02  Aligned_cols=209  Identities=18%  Similarity=0.184  Sum_probs=156.8

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGV  163 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~  163 (363)
                      .+.++....++|+..++||+|+||+||+|.. .+|+.||||++.....  ......+.+|+.++..++|||||++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            3455666778999999999999999999996 4588999999964221  111234889999999999999999999888


Q ss_pred             cCC-eEEEEEccCCCChhhhhhhc--cC------------------------------------CCCc------------
Q 048684          164 EGG-MHLILELSPHGSLASLLYAK--WL------------------------------------PDKW------------  192 (363)
Q Consensus       164 ~~~-~~lv~E~~~~gsL~~~l~~~--~~------------------------------------~~~~------------  192 (363)
                      +.. .|+|||||++|+|.+++...  .+                                    ....            
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  224 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence            766 89999999999999888521  00                                    0000            


Q ss_pred             ----eeEEEeecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc---CCc
Q 048684          193 ----THHIVSKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV---DPT  260 (363)
Q Consensus       193 ----~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~---~~~  260 (363)
                          ........+||+.|+|||++.     ...|+.++|||||||++|||+||++||.+..........+....   -|.
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~  304 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT  304 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS
T ss_pred             cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCc
Confidence                001122357999999999997     56799999999999999999999999988765554444433221   122


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHhh
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSAC--RPQMSKVVQALR  299 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~L~  299 (363)
                      .....+.+    +.+|+.+||..+|.+  ||++.+++++-.
T Consensus       305 ~~~~~s~~----~~dLi~~lL~~~~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          305 QVTDVSEN----AKDLIRRLICSREHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             SCCCSCHH----HHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred             ccccCCHH----HHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence            21224444    899999999888887  999999998644

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=6.4e-31  Score=245.44  Aligned_cols=205  Identities=21%  Similarity=0.369  Sum_probs=150.0

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEc
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVE  164 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  164 (363)
                      .+.++....++|.+.+.||+|+||.||+|.. .+|+.||||.+......  ...+.+|+.++.++ +||||+++++++..
T Consensus        15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            3444556678999999999999999999995 57999999999754432  36788999999999 79999999998765


Q ss_pred             -------CCeEEEEEccCCCChhhhhhhc---c------------------------------------CCCCcee----
Q 048684          165 -------GGMHLILELSPHGSLASLLYAK---W------------------------------------LPDKWTH----  194 (363)
Q Consensus       165 -------~~~~lv~E~~~~gsL~~~l~~~---~------------------------------------~~~~~~~----  194 (363)
                             ...++||||+++|+|.+++...   .                                    +......    
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEee
Confidence                   2378999999999998887421   0                                    0000000    


Q ss_pred             -----------EEEeecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC
Q 048684          195 -----------HIVSKIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       195 -----------~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                 .......||+.|+|||++.     +..++.++|||||||++|+|+||..||..................
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  252 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP  252 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc
Confidence                       0112346899999999997     567899999999999999999999999876544333333222222


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ......++.    .+.+++.+||+.||.+|||+.+++++
T Consensus       253 ~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          253 RLKSKKWSK----KFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             CCSCSCSCH----HHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cCCccccCH----HHHHHHHHHhccChhhCCCHHHHhhC
Confidence            222233444    48999999999999999999999974

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=7e-31  Score=242.10  Aligned_cols=200  Identities=22%  Similarity=0.334  Sum_probs=148.8

Q ss_pred             CCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~l  169 (363)
                      ..|...+.||+|+||+||+|...+    +..||||.+.........+.+.+|+.++++++||||+++++++...  ..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            468888999999999999998532    2368999998766666678899999999999999999999987543  3789


Q ss_pred             EEEccCCCChhhhhhhcc--------------------------------------CCCCce------------------
Q 048684          170 ILELSPHGSLASLLYAKW--------------------------------------LPDKWT------------------  193 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~------------------  193 (363)
                      ||||+++|+|.+++....                                      +.....                  
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence            999999999998874210                                      000000                  


Q ss_pred             -eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          194 -HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       194 -~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                       ........||+.|+|||++.+..++.++|||||||++|+|++ |.+||............... ..+..+...+.    
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----  259 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPD----  259 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-CCCCCCTTCCH----
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-CCCCCCccCCH----
Confidence             011122346788999999999999999999999999999999 56666655433332222222 22222333444    


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+.+++..||+.||.+|||+.++++.|+.
T Consensus       260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          260 PLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            49999999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=4.7e-31  Score=241.06  Aligned_cols=198  Identities=24%  Similarity=0.384  Sum_probs=149.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|.+.+.||+|+||+||+|.. .++..||||.+.....  ......+.+|+.++..++||||+++++++.+.. .++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46799999999999999999985 5578999999864321  123467889999999999999999999988776 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCce-------------eEEEeec
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWT-------------HHIVSKI  200 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~-------------~~~~~~~  200 (363)
                      |||+++|+|.+++....                                     +.....             .......
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL  167 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence            99999999988764110                                     000000             0011234


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      .||+.|+|||++.+..++.++|||||||++|+|++|..||............ .. ....++...+..    +.+++..|
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~----~~~li~~~  241 (279)
T 3fdn_A          168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SR-VEFTFPDFVTEG----ARDLISRL  241 (279)
T ss_dssp             CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-HH-TCCCCCTTSCHH----HHHHHHHH
T ss_pred             CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH-Hh-CCCCCCCcCCHH----HHHHHHHH
Confidence            6899999999999999999999999999999999999999876544333222 22 222333334444    88999999


Q ss_pred             cccCCCCCCCHHHHHHHh
Q 048684          281 INQTSACRPQMSKVVQAL  298 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L  298 (363)
                      |+.||.+|||+.+++++-
T Consensus       242 l~~~p~~Rps~~e~l~h~  259 (279)
T 3fdn_A          242 LKHNPSQRPMLREVLEHP  259 (279)
T ss_dssp             CCSSGGGSCCHHHHHHCH
T ss_pred             hccChhhCCCHHHHhhCc
Confidence            999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=1.7e-31  Score=249.85  Aligned_cols=200  Identities=22%  Similarity=0.407  Sum_probs=149.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcE--EEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQF--VAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~--vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|.. .+|..  ||||.+.........+.+.+|+.++.++ +||||+++++++.+.+ .++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5788999999999999999984 55664  4999987654444467799999999999 8999999999888766 8899


Q ss_pred             EEccCCCChhhhhhhcc-----------------CCC------------------------------------CceeEE-
Q 048684          171 LELSPHGSLASLLYAKW-----------------LPD------------------------------------KWTHHI-  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-----------------~~~------------------------------------~~~~~~-  196 (363)
                      |||+++|+|.+++....                 ++.                                    .....+ 
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence            99999999998874321                 000                                    000000 


Q ss_pred             -------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          197 -------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       197 -------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                                   .....+++.|+|||++.+..++.++|||||||++|||+| |+.||.+........ .+.....+..+
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~~~~  263 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-KLPQGYRLEKP  263 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HGGGTCCCCCC
T ss_pred             ccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-HhhcCCCCCCC
Confidence                         011236788999999999899999999999999999998 999998765443332 22332223333


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ...+    ..+.+++.+||+.||.+|||+.++++.|..
T Consensus       264 ~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          264 LNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             TTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            3344    449999999999999999999999998854

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.97  E-value=9.3e-31  Score=243.06  Aligned_cols=202  Identities=18%  Similarity=0.272  Sum_probs=148.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++.+++||||+++++++...+ .++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            47899999999999999999995 468999999997543  2334578999999999999999999999887766 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCcee----------------EEE
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWTH----------------HIV  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~----------------~~~  197 (363)
                      |||+++++|.+++....                                     +......                ...
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  192 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL  192 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence            99999999998874110                                     0000000                011


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC--cCCCCCCHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP--TLGDAYNTEQLTRLLL  275 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~  275 (363)
                      ....||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..+......  .....++    ..+.+
T Consensus       193 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~l~~  267 (309)
T 2h34_A          193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGIP----VAFDA  267 (309)
T ss_dssp             ----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-HHHHSCCCCGGGTSTTCC----THHHH
T ss_pred             cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-HHhccCCCCccccCCCCC----HHHHH
Confidence            2346899999999999999999999999999999999999999876554222 222221111  1122233    34899


Q ss_pred             HHHHccccCCCCCC-CHHHHHHHhhcC
Q 048684          276 IASACINQTSACRP-QMSKVVQALRGD  301 (363)
Q Consensus       276 li~~cl~~dP~~RP-t~~evl~~L~~~  301 (363)
                      ++.+||+.||.+|| ++.++++.|+..
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             HHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence            99999999999999 999999988754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=4.8e-31  Score=246.22  Aligned_cols=200  Identities=19%  Similarity=0.192  Sum_probs=151.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+......     .....+.+|+.++..++||||+++++++.+.. .+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            5689999999999999999985 46899999999754321     13568999999999999999999999888766 89


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------------cCCCCc----eeEE-----------
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------------WLPDKW----THHI-----------  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~----~~~~-----------  196 (363)
                      +||||+++|+|.+++...                                     .+....    ...+           
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~  171 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence            999999999999887411                                     000000    0000           


Q ss_pred             ---EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC--CcCCCCCCHHHHH
Q 048684          197 ---VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD--PTLGDAYNTEQLT  271 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  271 (363)
                         .....||+.|+|||++.+..++.++|||||||++|+|+||..||.+...............+  +......+    .
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~  247 (321)
T 2a2a_A          172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS----E  247 (321)
T ss_dssp             TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC----H
T ss_pred             cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccC----H
Confidence               12345899999999999999999999999999999999999999876544333332222111  01111223    4


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+.+++.+||+.||.+|||+.+++++-.
T Consensus       248 ~~~~li~~~l~~dp~~Rps~~e~l~hp~  275 (321)
T 2a2a_A          248 LAKDFIRKLLVKETRKRLTIQEALRHPW  275 (321)
T ss_dssp             HHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            4899999999999999999999998644

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=8.1e-31  Score=247.56  Aligned_cols=199  Identities=18%  Similarity=0.253  Sum_probs=148.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.++.++ +|||||++++++.+.. .|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5789999999999999999995 568999999997542  334456788999999988 8999999999887766 8999


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEEe
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~  198 (363)
                      |||+++|+|.+++....                                     +.....               .....
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~  168 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS  168 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence            99999999988774110                                     000000               01123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh--------hHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK--------SLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|+.||.....        .......+... ...++...+.   
T Consensus       169 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~---  244 (345)
T 3a8x_A          169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSV---  244 (345)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-CCCCCTTSCH---
T ss_pred             ccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-CCCCCCCCCH---
Confidence            45799999999999999999999999999999999999999975211        11111222211 2223333444   


Q ss_pred             HHHHHHHHHccccCCCCCCCH------HHHHHHhh
Q 048684          271 TRLLLIASACINQTSACRPQM------SKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~------~evl~~L~  299 (363)
                       .+.+++.+||+.||.+||++      .+++++-.
T Consensus       245 -~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          245 -KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             -HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred             -HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence             48999999999999999995      67776543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=4.6e-31  Score=253.48  Aligned_cols=200  Identities=18%  Similarity=0.254  Sum_probs=147.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~l  169 (363)
                      .++|++.++||+|+||+||+|+. .+|+.||||++.+..  .......+..|..++.++ +|||||++++++.+.. .++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            36799999999999999999995 568899999997532  222345688999999887 8999999999888766 899


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------CCCCc---------------eeEEE
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------LPDKW---------------THHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------~~~~~---------------~~~~~  197 (363)
                      |||||++|+|..++....                                     +....               .....
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~  210 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT  210 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcc
Confidence            999999999988774100                                     00000               00123


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh--------HHHHHhhhhhcCCcCCCCCCHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS--------LVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|++||......        ......+.. ....++...+.  
T Consensus       211 ~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~s~--  287 (396)
T 4dc2_A          211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSV--  287 (396)
T ss_dssp             CCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH-CCCCCCTTSCH--
T ss_pred             ccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc-cccCCCCcCCH--
Confidence            3467999999999999999999999999999999999999999643211        111122211 12233333444  


Q ss_pred             HHHHHHHHHHccccCCCCCCCH------HHHHHHhh
Q 048684          270 LTRLLLIASACINQTSACRPQM------SKVVQALR  299 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~------~evl~~L~  299 (363)
                        .+.+|+..||+.||.+||++      .+++++-.
T Consensus       288 --~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          288 --KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             --HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred             --HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence              48999999999999999995      67777544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=3.2e-31  Score=246.19  Aligned_cols=208  Identities=21%  Similarity=0.286  Sum_probs=150.7

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG  165 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~  165 (363)
                      +....++|...+.||+|+||+||+|...    ++..||||.+.... .....+.+.+|+.++.+++||||+++++++...
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            3444578999999999999999999753    34589999997543 344567899999999999999999999988764


Q ss_pred             C------eEEEEEccCCCChhhhhhhcc-------------------------------------------CCCCcee--
Q 048684          166 G------MHLILELSPHGSLASLLYAKW-------------------------------------------LPDKWTH--  194 (363)
Q Consensus       166 ~------~~lv~E~~~~gsL~~~l~~~~-------------------------------------------~~~~~~~--  194 (363)
                      .      .++||||+++|+|.+++....                                           +......  
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence            3      489999999999988873100                                           0000000  


Q ss_pred             ---------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcC
Q 048684          195 ---------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       195 ---------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                                     .......|++.|+|||++.+..++.++|||||||++|||++ |..||............... ..
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~  267 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-HR  267 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CC
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-CC
Confidence                           00112346788999999999999999999999999999999 89999876544333322222 22


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      +..+..++.    .+.+++..||+.||.+|||+.+++++|+....
T Consensus       268 ~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          268 LKQPEDCLD----ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             CCCBTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCccccH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            333333444    49999999999999999999999999975543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=4.6e-32  Score=250.08  Aligned_cols=201  Identities=21%  Similarity=0.343  Sum_probs=145.5

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHh--CCCCCcceEEEEEEcC-----Ce
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH--VDHPNIAKMIGYGVEG-----GM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~-----~~  167 (363)
                      .++|...+.||+|+||+||+|.. +|+.||||.+...    ....+..|.+++..  ++||||+++++++...     ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            46899999999999999999988 5899999998643    24566777777776  7999999999976542     27


Q ss_pred             EEEEEccCCCChhhhhhhccC-------------------C---------CCcee----------------EE-------
Q 048684          168 HLILELSPHGSLASLLYAKWL-------------------P---------DKWTH----------------HI-------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~-------------------~---------~~~~~----------------~~-------  196 (363)
                      ++||||+++|+|.+++....+                   .         ....|                .+       
T Consensus        82 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             EEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence            899999999999988742110                   0         00000                00       


Q ss_pred             ------------EeecccccCCCCchhhccC------CCCccceEEechhHHHHHHhC----------CCCCCCchhh--
Q 048684          197 ------------VSKIEGTFGYLPPEFFMHG------IADEKTDVYAYGVLLLEIITG----------RQALDSSQKS--  246 (363)
Q Consensus       197 ------------~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG----------~~P~~~~~~~--  246 (363)
                                  ....+||+.|+|||++.+.      .++.++|||||||++|||+||          ..||......  
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~  241 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP  241 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence                        0112689999999999877      556899999999999999999          8888653211  


Q ss_pred             --HHHHH-hhhhhcCCcCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          247 --LVMWS-SMKELVDPTLGDA-YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       247 --~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                        ..... .......+.++.. .+......+.+++..||+.||.+|||+.+|++.|+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             chhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence              11111 1111222222211 233466789999999999999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=7.2e-31  Score=239.71  Aligned_cols=198  Identities=21%  Similarity=0.342  Sum_probs=150.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~E  172 (363)
                      .++|...+.||+|+||+||+|... |+.||||.+....   ..+.|.+|+.++.+++||||+++++++.+.  ..++|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            467999999999999999999875 8899999997543   356899999999999999999999987654  3899999


Q ss_pred             ccCCCChhhhhhhcc---------------------------------------CCCCceeE------------EEeecc
Q 048684          173 LSPHGSLASLLYAKW---------------------------------------LPDKWTHH------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~------------~~~~~~  201 (363)
                      |+++|+|.+++....                                       +.......            ......
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  175 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  175 (278)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence            999999988774110                                       00000000            011234


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +++.|+|||++.+..++.++|||||||++|||+| |+.||........... +.....+......+.    .+.+++..|
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~l~~li~~~  250 (278)
T 1byg_A          176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPP----AVYEVMKNC  250 (278)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-HTTTCCCCCCTTCCH----HHHHHHHHH
T ss_pred             ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HhcCCCCCCcccCCH----HHHHHHHHH
Confidence            7889999999999999999999999999999998 9999987654433322 222223333344444    499999999


Q ss_pred             cccCCCCCCCHHHHHHHhhcC
Q 048684          281 INQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L~~~  301 (363)
                      |+.||.+|||+.++++.|+..
T Consensus       251 l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          251 WHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCChhhCCCHHHHHHHHHHH
Confidence            999999999999999988653

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=1.1e-30  Score=241.83  Aligned_cols=199  Identities=16%  Similarity=0.248  Sum_probs=148.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||++.. .+|+.||||.+...... ....+.+|+.++..++||||+++++++.+.. .++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            5788999999999999999985 47999999999754432 2457889999999999999999999888766 8899999


Q ss_pred             cCCCChhhhhhhc------------------------------------c-C---CCCceeEE-------------Eeec
Q 048684          174 SPHGSLASLLYAK------------------------------------W-L---PDKWTHHI-------------VSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~------------------------------------~-~---~~~~~~~~-------------~~~~  200 (363)
                      +++|+|.+++...                                    . +   .......+             ....
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA  167 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence            9999998876411                                    0 0   00000000             1123


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +||+.|+|||++.+..++.++|||||||++|+|++|..||...................  ........+..+.+++..|
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~li~~~  245 (304)
T 2jam_A          168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF--ESPFWDDISESAKDFICHL  245 (304)
T ss_dssp             HSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCC--CTTTTTTSCHHHHHHHHHH
T ss_pred             cCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CccccccCCHHHHHHHHHH
Confidence            48999999999999999999999999999999999999998765443333322222211  1111222334599999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      |+.||.+|||+.+++++
T Consensus       246 l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          246 LEKDPNERYTCEKALSH  262 (304)
T ss_dssp             HCSSTTTSCCHHHHHTS
T ss_pred             cCCChhHCcCHHHHhcC
Confidence            99999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=9.7e-31  Score=242.58  Aligned_cols=203  Identities=20%  Similarity=0.292  Sum_probs=144.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|...+.||+|+||+||+|.. .+|+.||||.+..... ....+.+.+|+.++.+++||||+++++++.... .++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5789999999999999999996 5599999999865543 334567889999999999999999999888766 889999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCCCce---------------eEEEeec
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPDKWT---------------HHIVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~~~~---------------~~~~~~~  200 (363)
                      |+++++|.+++...                                     .+.....               .......
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE  162 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCC
Confidence            99999887765310                                     0000000               0112234


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--------------------cCC
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--------------------VDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--------------------~~~  259 (363)
                      +||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.+..............                    ..+
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (311)
T 4agu_A          163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP  242 (311)
T ss_dssp             ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCC
T ss_pred             cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCC
Confidence            68999999999976 568999999999999999999999998765433222111100                    000


Q ss_pred             cCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          260 TLGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       260 ~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ......+     +..+..+.+++..||+.||.+|||+.+++++-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  286 (311)
T 4agu_A          243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP  286 (311)
T ss_dssp             CCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred             CccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence            0000000     12334588999999999999999999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=1.5e-30  Score=264.32  Aligned_cols=194  Identities=21%  Similarity=0.292  Sum_probs=147.6

Q ss_pred             CcccccCceEEEEEEE---cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQL---EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~---~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~g  177 (363)
                      +.||+|+||+||+|.+   .+++.||||+++... .....+.|.+|+.+|.+++|||||++++++.....++|||||++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            4799999999999964   346789999997543 233467899999999999999999999999888899999999999


Q ss_pred             Chhhhhhhcc--------------------------CCC-----------Cce------------------eEEEeeccc
Q 048684          178 SLASLLYAKW--------------------------LPD-----------KWT------------------HHIVSKIEG  202 (363)
Q Consensus       178 sL~~~l~~~~--------------------------~~~-----------~~~------------------~~~~~~~~g  202 (363)
                      +|.+++....                          +..           ...                  ........|
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~  534 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  534 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCC
Confidence            9998874210                          000           000                  001112246


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |+.|+|||++.+..++.++|||||||+||||+| |+.||.+.......... .....+..+..++.    .+.+|+..||
T Consensus       535 t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~----~l~~li~~cl  609 (635)
T 4fl3_A          535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-EKGERMGCPAGCPR----EMYDLMNLCW  609 (635)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCH----HHHHHHHHHT
T ss_pred             ceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCH----HHHHHHHHHc
Confidence            788999999999999999999999999999998 99999877655443332 23333333344444    4999999999


Q ss_pred             ccCCCCCCCHHHHHHHhhc
Q 048684          282 NQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~  300 (363)
                      +.||.+|||+.+|++.|+.
T Consensus       610 ~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          610 TYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CSSTTTSCCHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHHHH
Confidence            9999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.2e-31  Score=241.32  Aligned_cols=200  Identities=21%  Similarity=0.290  Sum_probs=148.3

Q ss_pred             CCccCCcccccCceEEEEEEE-cCC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--MHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~lv  170 (363)
                      .|...++||+|+||+||+|.. .++   ..||+|.+.........+.|.+|+.+++.++||||+++++++.+.+  .++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            456668999999999999984 333   3799999987666556788999999999999999999999987654  4899


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeE-----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHH-----------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~-----------------  195 (363)
                      |||+.+|+|.+++....                                      +.......                 
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence            99999999998875210                                      00000000                 


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCC-CCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQA-LDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                        ......||+.|+|||.+.+..++.++|||||||++|+|+||..| |......... ..+........+...+.    .
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~  256 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT-HFLAQGRRLPQPEYCPD----S  256 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH-HHHHTTCCCCCCTTCCH----H
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH-HHhhcCCCCCCCccchH----H
Confidence              01123467889999999999999999999999999999995555 5444333222 22222222333333444    4


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.+++..||+.||.+|||+.++++.|+..
T Consensus       257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          257 LYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999998654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=3.8e-31  Score=250.56  Aligned_cols=199  Identities=15%  Similarity=0.231  Sum_probs=152.7

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~l  169 (363)
                      .++|...++||+|+||+||+|... +|+.||||.+....  .......+..|..++..+ +||||+++++++.+.. .|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            478999999999999999999964 58899999997432  112356788999999988 7999999999887765 899


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEE
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIV  197 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~  197 (363)
                      |||||++|+|.+++....                                     +.....               ....
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~  178 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccc
Confidence            999999999988874100                                     000000               0112


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++...+.    .+.+|+
T Consensus       179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~~li  252 (353)
T 2i0e_A          179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSK----EAVAIC  252 (353)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCH----HHHHHH
T ss_pred             ccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCH----HHHHHH
Confidence            34579999999999999999999999999999999999999998776554444443332  223333444    499999


Q ss_pred             HHccccCCCCCCC-----HHHHHHHhh
Q 048684          278 SACINQTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       278 ~~cl~~dP~~RPt-----~~evl~~L~  299 (363)
                      .+||+.||.+||+     +.+++++-.
T Consensus       253 ~~lL~~dP~~R~~~~~~~~~~i~~h~~  279 (353)
T 2i0e_A          253 KGLMTKHPGKRLGCGPEGERDIKEHAF  279 (353)
T ss_dssp             HHHTCSCTTSCTTCSTTHHHHHHTSGG
T ss_pred             HHHhhcCHHHcCCCCCCCHHHHhcCcc
Confidence            9999999999995     577876543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=258.28  Aligned_cols=208  Identities=19%  Similarity=0.213  Sum_probs=154.7

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGV  163 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~  163 (363)
                      .+.++....++|+..++||+|+||+||++.. .+|+.||||++.+...  ......+.+|+.++..++|||||++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3445556678999999999999999999996 5799999999964321  122345889999999999999999999888


Q ss_pred             cCC-eEEEEEccCCCChhhhhhhc--cCC------------------------------------CCc---------e--
Q 048684          164 EGG-MHLILELSPHGSLASLLYAK--WLP------------------------------------DKW---------T--  193 (363)
Q Consensus       164 ~~~-~~lv~E~~~~gsL~~~l~~~--~~~------------------------------------~~~---------~--  193 (363)
                      +.. .|+|||||++|+|.+++...  .++                                    ...         .  
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~  211 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK  211 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence            766 89999999999999887521  000                                    000         0  


Q ss_pred             -----eEEEeecccccCCCCchhhc-------cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--c-C
Q 048684          194 -----HHIVSKIEGTFGYLPPEFFM-------HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--V-D  258 (363)
Q Consensus       194 -----~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--~-~  258 (363)
                           .......+||+.|+|||++.       ...|+.++|||||||++|||++|++||.+..........+...  . .
T Consensus       212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~  291 (412)
T 2vd5_A          212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSL  291 (412)
T ss_dssp             CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC
T ss_pred             ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCC
Confidence                 00112357999999999997       3578999999999999999999999998776554444433221  1 1


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHHhh
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACR---PQMSKVVQALR  299 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~~L~  299 (363)
                      |......+.    .+.+|+.+||. +|.+|   |++.+++++-.
T Consensus       292 p~~~~~~s~----~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          292 PLVDEGVPE----EARDFIQRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             C----CCCH----HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             CccccCCCH----HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence            222233444    49999999999 99998   69999987643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=2.9e-31  Score=259.07  Aligned_cols=200  Identities=17%  Similarity=0.222  Sum_probs=145.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCC--CchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|+..+.||+|+||.||+|.. .+|+.||||.+...  ........+.+|+.++..++|||||++++++...+ .++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            36799999999999999999984 56999999998643  12233567889999999999999999999888766 8999


Q ss_pred             EEccCCCChhhhhh-------------------------h-c-cCCC-----------Cc---------------eeEEE
Q 048684          171 LELSPHGSLASLLY-------------------------A-K-WLPD-----------KW---------------THHIV  197 (363)
Q Consensus       171 ~E~~~~gsL~~~l~-------------------------~-~-~~~~-----------~~---------------~~~~~  197 (363)
                      ||||++|+|.+++.                         . . .+..           ..               .....
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  306 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM  306 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence            99999999987763                         1 1 0000           00               01112


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............  ..++...+.    .+.+|+
T Consensus       307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~----~~~~li  380 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLGP----EAKSLL  380 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCH----HHHHHH
T ss_pred             ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCH----HHHHHH
Confidence            34579999999999999999999999999999999999999998766544443333322  223333444    489999


Q ss_pred             HHccccCCCCCC-----CHHHHHHHhhc
Q 048684          278 SACINQTSACRP-----QMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RP-----t~~evl~~L~~  300 (363)
                      ..||+.||.+||     ++.+++++-..
T Consensus       381 ~~~L~~dP~~R~~~~~~t~~ell~hp~f  408 (446)
T 4ejn_A          381 SGLLKKDPKQRLGGGSEDAKEIMQHRFF  408 (446)
T ss_dssp             HHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             HHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence            999999999999     99999986543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=2.1e-30  Score=238.28  Aligned_cols=198  Identities=23%  Similarity=0.409  Sum_probs=147.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.|....+||+|+||+||+|.. .++..||||.+..... ...+.+.+|+.++..++||||+++++++...+ .++||||
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            4456667899999999999985 5689999999976543 33578999999999999999999999888766 7899999


Q ss_pred             cCCCChhhhhhhccCC----------------------------------------C-Ccee---------------EEE
Q 048684          174 SPHGSLASLLYAKWLP----------------------------------------D-KWTH---------------HIV  197 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~----------------------------------------~-~~~~---------------~~~  197 (363)
                      +++|+|.+++......                                        . ....               ...
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~  180 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT  180 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence            9999998877421000                                        0 0000               001


Q ss_pred             eecccccCCCCchhhccCC--CCccceEEechhHHHHHHhCCCCCCCchhhH-HHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGI--ADEKTDVYAYGVLLLEIITGRQALDSSQKSL-VMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ....||+.|+|||++.+..  ++.++|||||||++|+|++|+.||....... ..+........+.++...+.+    +.
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  256 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE----AK  256 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHH----HH
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHH----HH
Confidence            2345899999999997654  8999999999999999999999997543222 222222222334444444544    89


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHh
Q 048684          275 LIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +++.+||+.||.+|||+.+++++-
T Consensus       257 ~li~~~l~~dp~~Rps~~~ll~~~  280 (295)
T 2clq_A          257 AFILKCFEPDPDKRACANDLLVDE  280 (295)
T ss_dssp             HHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred             HHHHHHccCChhhCCCHHHHhcCh
Confidence            999999999999999999999753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=8.1e-31  Score=259.74  Aligned_cols=200  Identities=18%  Similarity=0.236  Sum_probs=147.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch------------hHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE------------EMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      .++|.+.+.||+|+||+||+|.. .++..||||.+......            ...+.+.+|+.++++++|||||+++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46899999999999999999995 56889999998754311            235678999999999999999999999


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhc-------------------------------------cCCCCc---eeE-----
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAK-------------------------------------WLPDKW---THH-----  195 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~---~~~-----  195 (363)
                      +.+.. .++|||||++|+|.+++...                                     .+....   ...     
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  194 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG  194 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence            88776 88999999999998776311                                     000000   000     


Q ss_pred             ---------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCC
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYN  266 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (363)
                               .....+||+.|+|||++. +.++.++|||||||++|+|++|.+||.+....................  ..
T Consensus       195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~  271 (504)
T 3q5i_A          195 LSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN--DW  271 (504)
T ss_dssp             TCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH--HH
T ss_pred             CCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc--cc
Confidence                     112346999999999986 569999999999999999999999998876554443333322211100  00


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...+..+.+++..||+.||.+|||+.+++++
T Consensus       272 ~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          272 KNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            1123459999999999999999999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=2.1e-30  Score=240.94  Aligned_cols=203  Identities=19%  Similarity=0.238  Sum_probs=145.3

Q ss_pred             CCCccC-CcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHE-NLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~-~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      +.|.+. +.||+|+||+||+|. ..+|+.||||.+...... ....+.+|+.++.++ +||||+++++++.+.+ .++||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH-IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC-CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch-hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            567774 789999999999998 457999999999765432 357899999999985 7999999999887766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCce---eE----------------
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWT---HH----------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---~~----------------  195 (363)
                      |||++|+|.+++....                                     +.....   ..                
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  170 (316)
T 2ac3_A           91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC  170 (316)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred             EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence            9999999988874110                                     000000   00                


Q ss_pred             ------EEeecccccCCCCchhhcc-----CCCCccceEEechhHHHHHHhCCCCCCCchhh--------------HHHH
Q 048684          196 ------IVSKIEGTFGYLPPEFFMH-----GIADEKTDVYAYGVLLLEIITGRQALDSSQKS--------------LVMW  250 (363)
Q Consensus       196 ------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--------------~~~~  250 (363)
                            .....+||+.|+|||++.+     ..++.++|||||||++|||+||+.||.+....              ....
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  250 (316)
T 2ac3_A          171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF  250 (316)
T ss_dssp             -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred             ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence                  0112359999999999975     56899999999999999999999999764321              1111


Q ss_pred             HhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          251 SSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..+.... ..++..........+.+|+.+||+.||.+|||+.+++++-..
T Consensus       251 ~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  299 (316)
T 2ac3_A          251 ESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV  299 (316)
T ss_dssp             HHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred             HHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence            1111111 111100001123458999999999999999999999986543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.7e-31  Score=251.75  Aligned_cols=199  Identities=22%  Similarity=0.340  Sum_probs=146.8

Q ss_pred             CCccCCcccccCceEEEEEEEc--CC--cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLE--DG--QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLI  170 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~--~g--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv  170 (363)
                      .|...+.||+|+||+||+|...  ++  ..||||.+.........+.|.+|+.++.+++|||||++++++...  ..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4667789999999999999852  22  468999997655555578899999999999999999999987643  37899


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeE-----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHH-----------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~-----------------  195 (363)
                      |||+++|+|.+++....                                      +.......                 
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence            99999999998874110                                      00000000                 


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                        ......||+.|+|||++.+..++.++|||||||++|||+| |.+||............. ....+..+...+.    .
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~----~  324 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD----P  324 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTTCCH----H
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCH----H
Confidence              0122346778999999999999999999999999999999 777887654332222222 2222222233444    4


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+++.+||+.||.+|||+.++++.|+.
T Consensus       325 l~~li~~cl~~dp~~RPs~~ell~~L~~  352 (373)
T 3c1x_A          325 LYEVMLKCWHPKAEMRPSFSELVSRISA  352 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            8999999999999999999999998854

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=9.5e-32  Score=258.50  Aligned_cols=204  Identities=19%  Similarity=0.266  Sum_probs=152.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC---eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG---MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~lv~  171 (363)
                      +.|.+.++||+|+||+||+|.. .+|+.||||.+...........+.+|+.++.+++|||||++++++....   .++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            5788999999999999999986 4599999999975443344577889999999999999999999887543   68999


Q ss_pred             EccCCCChhhhhhhcc----C----------------------------------------CCCceeEE-----------
Q 048684          172 ELSPHGSLASLLYAKW----L----------------------------------------PDKWTHHI-----------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~----~----------------------------------------~~~~~~~~-----------  196 (363)
                      |||++|+|.+++....    +                                        .......+           
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~  168 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence            9999999988875211    0                                        00000000           


Q ss_pred             ---EeecccccCCCCchhhcc--------CCCCccceEEechhHHHHHHhCCCCCCCchh----hHHHHHhhhhhcC---
Q 048684          197 ---VSKIEGTFGYLPPEFFMH--------GIADEKTDVYAYGVLLLEIITGRQALDSSQK----SLVMWSSMKELVD---  258 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~----~~~~~~~~~~~~~---  258 (363)
                         ....+||+.|+|||++.+        ..++.++|||||||++|||+||+.||.....    .......+.....   
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~  248 (396)
T 4eut_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI  248 (396)
T ss_dssp             GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCC
T ss_pred             CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccc
Confidence               012358999999999875        5688999999999999999999999964321    1222222221110   


Q ss_pred             ----------------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 ----------------PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 ----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                      .......+......+.+++..||+.||.+|||+.++++.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~  305 (396)
T 4eut_A          249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (396)
T ss_dssp             EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence                            01112345677888999999999999999999999998774

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=5.1e-31  Score=242.59  Aligned_cols=203  Identities=17%  Similarity=0.222  Sum_probs=143.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++.+++|||||++++++.++. .++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5788999999999999999985 568999999997544 3344578899999999999999999999887766 899999


Q ss_pred             ccCCCChhhhhhh--------------------------c------------cCCCCcee---------------EEEee
Q 048684          173 LSPHGSLASLLYA--------------------------K------------WLPDKWTH---------------HIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~--------------------------~------------~~~~~~~~---------------~~~~~  199 (363)
                      ||.+ +|.+++..                          .            .+......               .....
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA  160 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence            9986 44433321                          0            00000000               01123


Q ss_pred             cccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCc-hhhHHHHHhhhhhcCCcCC---------------
Q 048684          200 IEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSS-QKSLVMWSSMKELVDPTLG---------------  262 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~-~~~~~~~~~~~~~~~~~~~---------------  262 (363)
                      .+||+.|+|||++.+.. ++.++|||||||++|||+||..||... ...............+...               
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T 3o0g_A          161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence            46899999999998766 899999999999999999988885443 3222222221111110000               


Q ss_pred             --------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          263 --------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       263 --------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                              ....+.....+.+|+.+||+.||.+|||+.+++++-.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence                    0011223455899999999999999999999997543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=2.4e-30  Score=263.78  Aligned_cols=205  Identities=21%  Similarity=0.299  Sum_probs=156.8

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGM  167 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~  167 (363)
                      ....++|...+.||+|+||+||+|...    .+..||||.+.........+.|.+|+.++.+++|||||++++++.++..
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~  465 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV  465 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCce
Confidence            344577999999999999999999863    2567999999866656666889999999999999999999999987779


Q ss_pred             EEEEEccCCCChhhhhhhccCCCC--------------------------------------c----------------e
Q 048684          168 HLILELSPHGSLASLLYAKWLPDK--------------------------------------W----------------T  193 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~~~--------------------------------------~----------------~  193 (363)
                      ++||||+++|+|.+++........                                      .                .
T Consensus       466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence            999999999999988752110000                                      0                0


Q ss_pred             eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          194 HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       194 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+............ ...+..+...+.    .
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~----~  620 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNCPP----T  620 (656)
T ss_dssp             --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-TCCCCCCTTCCH----H
T ss_pred             ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCCCCCCccccH----H
Confidence            001112346788999999999999999999999999999997 9999987655443333222 222333334444    4


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.+++.+||+.||.+|||+.++++.|+..
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            99999999999999999999999998654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=6.7e-31  Score=259.18  Aligned_cols=199  Identities=20%  Similarity=0.256  Sum_probs=150.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++++++|||||++++++.+.. .++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            5799999999999999999985 579999999985321 1123568899999999999999999999988766 889999


Q ss_pred             ccCCCChhhhhhhc-------------------------c------------C---CCCce--------------eEEEe
Q 048684          173 LSPHGSLASLLYAK-------------------------W------------L---PDKWT--------------HHIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------~------------~---~~~~~--------------~~~~~  198 (363)
                      ||.+|+|.+++...                         .            +   .....              .....
T Consensus       102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~  181 (486)
T 3mwu_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK  181 (486)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccC
Confidence            99999998776310                         0            0   00000              01123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+...................+  .....+..+.+++.
T Consensus       182 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li~  258 (486)
T 3mwu_A          182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP--QWRTISDDAKDLIR  258 (486)
T ss_dssp             CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSG--GGGGSCHHHHHHHH
T ss_pred             CCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc--ccCCCCHHHHHHHH
Confidence            3469999999999875 59999999999999999999999998776554444433332222111  11223445999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.+++++
T Consensus       259 ~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          259 KMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHTCSSTTTSCCHHHHHHC
T ss_pred             HHcCCChhhCcCHHHHhcC
Confidence            9999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=1.5e-30  Score=237.98  Aligned_cols=200  Identities=20%  Similarity=0.233  Sum_probs=148.4

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|...+.||+|+||+||+|... +|+.||||.+......     ...+.+.+|+.++.+++||||+++++++.+.. .+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46888999999999999999964 6899999998654321     13578999999999999999999999888766 88


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------------cCCCCc----eeE------------
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------------WLPDKW----THH------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~----~~~------------  195 (363)
                      +||||+++++|.+++...                                     .+....    ...            
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            999999999999887411                                     000000    000            


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                        ......||+.|+|||++.+..++.++|||||||++|+|++|..||.................  .............+
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  242 (283)
T 3bhy_A          165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY--DFDEEYFSNTSELA  242 (283)
T ss_dssp             -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCHHHHTTCCHHH
T ss_pred             CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc--CCcchhcccCCHHH
Confidence              11234589999999999999999999999999999999999999987654433222211111  11100001123448


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHH
Q 048684          274 LLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+++.+||+.||.+|||+.+++++
T Consensus       243 ~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          243 KDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHhC
Confidence            999999999999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=5.9e-31  Score=258.42  Aligned_cols=196  Identities=16%  Similarity=0.266  Sum_probs=151.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+.....  ......+.+|+.+++.++||||+++++++.... .++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            6799999999999999999996 4799999999964321  123567899999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCcee--------------EEEeec
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTH--------------HIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~--------------~~~~~~  200 (363)
                      |||++|+|.+++....                                     +......              ......
T Consensus        96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~  175 (476)
T 2y94_A           96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS  175 (476)
T ss_dssp             ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccccc
Confidence            9999999998874110                                     0000000              112345


Q ss_pred             ccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      +||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+...............  ..+...+.    .+.+|+..
T Consensus       176 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~----~~~~Li~~  249 (476)
T 2y94_A          176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF--YTPQYLNP----SVISLLKH  249 (476)
T ss_dssp             CSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC--CCCTTCCH----HHHHHHHH
T ss_pred             CCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc--CCCccCCH----HHHHHHHH
Confidence            79999999999988765 7899999999999999999999987665444333333322  12223344    48999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+|||+.+++++
T Consensus       250 ~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          250 MLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             HTCSSTTTSCCHHHHHTC
T ss_pred             HcCCCchhCcCHHHHHhC
Confidence            999999999999999974

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=1.3e-30  Score=257.62  Aligned_cols=199  Identities=20%  Similarity=0.240  Sum_probs=146.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      +.|...+.||+|+||+||+|.. .+|..||||.+.... .......+.+|+.+++.++|||||++++++.+.. .++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4699999999999999999995 468999999997543 1223467899999999999999999999988766 889999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cCCC---CceeE--------------EEe
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WLPD---KWTHH--------------IVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~~~---~~~~~--------------~~~  198 (363)
                      ||++|+|.+++...                                     .+..   .....              ...
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~  196 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK  196 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBC
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcccc
Confidence            99999998766310                                     0000   00000              112


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++. +.++.++|||||||++|+|++|.+||.+...................  ......+..+.+++.
T Consensus       197 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~s~~~~~li~  273 (494)
T 3lij_A          197 ERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS--PEWKNVSEGAKDLIK  273 (494)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS--GGGTTSCHHHHHHHH
T ss_pred             ccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc--hhcccCCHHHHHHHH
Confidence            346999999999986 56999999999999999999999999887655444443333222111  111123345899999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.+++++
T Consensus       274 ~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          274 QMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHTCSSTTTSCCHHHHHTC
T ss_pred             HHCCCChhhCccHHHHhcC
Confidence            9999999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=4.8e-31  Score=252.41  Aligned_cols=197  Identities=19%  Similarity=0.284  Sum_probs=146.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||.||++.. .+|+.||||.+....  .......+.+|+.++..++|||||++++++.+.. .++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5799999999999999999985 568999999986432  1223567899999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCcee--------------EEEeec
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTH--------------HIVSKI  200 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~--------------~~~~~~  200 (363)
                      |||.+|+|.+++....                                     +......              ......
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  174 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM  174 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCC
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceecc
Confidence            9999999988774110                                     0000000              012345


Q ss_pred             ccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhH--HHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSL--VMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       201 ~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      +||+.|+|||++..   ..++.++|||||||++|||+||+.||.......  .....+.. .....+..++.    .+.+
T Consensus       175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~p~~~s~----~~~~  249 (384)
T 4fr4_A          175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-TVVTYPSAWSQ----EMVS  249 (384)
T ss_dssp             CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH-CCCCCCTTSCH----HHHH
T ss_pred             CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh-cccCCCCcCCH----HHHH
Confidence            79999999999974   458999999999999999999999997543221  11111111 12223333444    4999


Q ss_pred             HHHHccccCCCCCCC-HHHHHHH
Q 048684          276 IASACINQTSACRPQ-MSKVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt-~~evl~~  297 (363)
                      |+..||+.||.+||+ +.+|+++
T Consensus       250 li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          250 LLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             HHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             HHHHHhcCCHhHhcccHHHHHcC
Confidence            999999999999999 7777754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=2.7e-31  Score=245.22  Aligned_cols=200  Identities=22%  Similarity=0.363  Sum_probs=146.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .+.|++.+.||+|+||.||+|.. .+|..||+|.+...... ....+.+|+.++..++||||+++++++...+ .++|||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            46799999999999999999996 46899999998754433 3578999999999999999999999887665 899999


Q ss_pred             ccCCCChhhhhhhcc--------------------------------------CCCCceeEE---------------Eee
Q 048684          173 LSPHGSLASLLYAKW--------------------------------------LPDKWTHHI---------------VSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~---------------~~~  199 (363)
                      |+++|+|.+++....                                      +.......+               ...
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  176 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS  176 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence            999999988764210                                      000000000               112


Q ss_pred             cccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       200 ~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ..||+.|+|||++.     +..++.++|||||||++|+|++|..||................. +..  ..+......+.
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~  253 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP-PTL--LTPSKWSVEFR  253 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCC--SSGGGSCHHHH
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC-ccc--CCccccCHHHH
Confidence            35899999999984     66789999999999999999999999987654443333222221 111  11222334589


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHh
Q 048684          275 LIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +++..||+.||.+|||+.+++++-
T Consensus       254 ~li~~~l~~dp~~Rps~~~ll~h~  277 (302)
T 2j7t_A          254 DFLKIALDKNPETRPSAAQLLEHP  277 (302)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHTTST
T ss_pred             HHHHHHcccChhhCCCHHHHhcCh
Confidence            999999999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=7.2e-31  Score=239.46  Aligned_cols=199  Identities=18%  Similarity=0.239  Sum_probs=148.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|.+.+.||+|+||+||+|.. .++..||+|.+....... .+.+.+|+.++.+++||||+++++++.+.. .++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            35789999999999999999985 457899999987543332 578999999999999999999999988776 889999


Q ss_pred             ccCCCChhhhhhhc-------------------------------------cC---CCCceeE--------------EEe
Q 048684          173 LSPHGSLASLLYAK-------------------------------------WL---PDKWTHH--------------IVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------------~~---~~~~~~~--------------~~~  198 (363)
                      |+++|+|.+++...                                     .+   .......              ...
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~  166 (277)
T 3f3z_A           87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR  166 (277)
T ss_dssp             CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred             ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence            99999998876411                                     00   0000000              112


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...||+.|+|||++.+ .++.++|||||||++|||+||+.||...................  +..........+.+++.
T Consensus       167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~  243 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTF--PEKDWLNVSPQAESLIR  243 (277)
T ss_dssp             CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHHHHTTSCHHHHHHHH
T ss_pred             ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CchhhhcCCHHHHHHHH
Confidence            3458999999999865 49999999999999999999999998765544433332222111  10000012345999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      .||+.||.+|||+.+++++
T Consensus       244 ~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          244 RLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HHTCSSTTTSCCHHHHTTS
T ss_pred             HHccCChhhCcCHHHHhcC
Confidence            9999999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.9e-30  Score=242.60  Aligned_cols=203  Identities=21%  Similarity=0.328  Sum_probs=150.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-----cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC---Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~  167 (363)
                      ++|.+.+.||+|+||.||+|..     .+|+.||||.+..... ...+.|.+|+.++.+++||||+++++++...   ..
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS-HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            5688899999999999999984     3588999999976543 3467899999999999999999999987653   37


Q ss_pred             EEEEEccCCCChhhhhhhcc--CC------------------------------C------Ccee---------------
Q 048684          168 HLILELSPHGSLASLLYAKW--LP------------------------------D------KWTH---------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~~------------------------------~------~~~~---------------  194 (363)
                      ++||||+++|+|.+++....  ++                              .      ....               
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence            89999999999998875210  00                              0      0000               


Q ss_pred             ---EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHH---------------HHhhhhh
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM---------------WSSMKEL  256 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~---------------~~~~~~~  256 (363)
                         .......|+..|+|||++.+..++.++|||||||++|||+||..||.........               ...+...
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  279 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence               0011123667799999999999999999999999999999999998653211110               0111111


Q ss_pred             cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChH
Q 048684          257 VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEE  303 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~  303 (363)
                      ..+..+...+    ..+.+++..||+.||.+|||+.++++.|+...+
T Consensus       280 ~~~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          280 GRLPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             CCCCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1222223344    449999999999999999999999999876543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=2.1e-31  Score=251.33  Aligned_cols=197  Identities=19%  Similarity=0.258  Sum_probs=146.1

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.....     .+.+|++++.++ +|||||++++++.++. .|+||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            45799999999999999999985 5689999999975432     234688888887 7999999999988776 79999


Q ss_pred             EccCCCChhhhhhhc------------------------------------c-CCCC-------------cee------E
Q 048684          172 ELSPHGSLASLLYAK------------------------------------W-LPDK-------------WTH------H  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~------------------------------------~-~~~~-------------~~~------~  195 (363)
                      |||++|+|.+++...                                    . +...             ...      .
T Consensus        96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            999999998876411                                    0 0000             000      0


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh---hHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK---SLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|..||.....   ............  .+....+...+..
T Consensus       176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~  253 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--SLSGGYWNSVSDT  253 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC--CCCSTTTTTSCHH
T ss_pred             ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc--ccCccccccCCHH
Confidence            11234689999999999988899999999999999999999999986321   112212222211  1222222334455


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          273 LLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      +.+|+.+||+.||.+|||+.+++++-
T Consensus       254 ~~~li~~~L~~dP~~R~t~~~il~hp  279 (342)
T 2qr7_A          254 AKDLVSKMLHVDPHQRLTAALVLRHP  279 (342)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCC
Confidence            99999999999999999999999753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=6.1e-31  Score=246.43  Aligned_cols=201  Identities=16%  Similarity=0.179  Sum_probs=147.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+......   ..+.+|+.++..+ +||||+++++++.... .++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            36799999999999999999984 67999999998754322   3688999999999 8999999999888776 78999


Q ss_pred             EccCCCChhhhhhhc--c------------------------------------CCCCce-----eEE------------
Q 048684          172 ELSPHGSLASLLYAK--W------------------------------------LPDKWT-----HHI------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--~------------------------------------~~~~~~-----~~~------------  196 (363)
                      ||+ +|+|.+++...  .                                    +.....     ..+            
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence            999 89998887410  0                                    000000     000            


Q ss_pred             ----------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHH--HHHhhhhhcCCcCCCC
Q 048684          197 ----------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLV--MWSSMKELVDPTLGDA  264 (363)
Q Consensus       197 ----------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~  264 (363)
                                ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+......  ....+.....+.....
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~  243 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV  243 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHH
Confidence                      1245699999999999999999999999999999999999999987432211  1111111100000000


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .....+ .+.+++..||+.||.+||++.+|++.|+.
T Consensus       244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            000012 59999999999999999999999998863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.7e-30  Score=249.01  Aligned_cols=204  Identities=17%  Similarity=0.249  Sum_probs=139.8

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC---Ce
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG---GM  167 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~---~~  167 (363)
                      ..++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..+. |||||++++++...   ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457899999999999999999984 679999999986432 3344677889999999997 99999999988643   37


Q ss_pred             EEEEEccCCCChhhhhhhcc------------------------------------CCC---------Cce---------
Q 048684          168 HLILELSPHGSLASLLYAKW------------------------------------LPD---------KWT---------  193 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~------------------------------------~~~---------~~~---------  193 (363)
                      |+|||||. |+|..++....                                    +..         ...         
T Consensus        87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  165 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV  165 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred             EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence            99999998 58877664110                                    000         000         


Q ss_pred             ------------------eEEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh
Q 048684          194 ------------------HHIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK  254 (363)
Q Consensus       194 ------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~  254 (363)
                                        .......+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+........+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~  245 (388)
T 3oz6_A          166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG  245 (388)
T ss_dssp             CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence                              112234579999999999986 6799999999999999999999999987654433332221


Q ss_pred             hhcCCc-----------------------------CCCCCC------------HHHHHHHHHHHHHccccCCCCCCCHHH
Q 048684          255 ELVDPT-----------------------------LGDAYN------------TEQLTRLLLIASACINQTSACRPQMSK  293 (363)
Q Consensus       255 ~~~~~~-----------------------------~~~~~~------------~~~~~~l~~li~~cl~~dP~~RPt~~e  293 (363)
                      ....|.                             ....++            ......+.+|+.+||+.||.+|||+.+
T Consensus       246 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e  325 (388)
T 3oz6_A          246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAND  325 (388)
T ss_dssp             HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHH
Confidence            111110                             000000            012345899999999999999999999


Q ss_pred             HHHHh
Q 048684          294 VVQAL  298 (363)
Q Consensus       294 vl~~L  298 (363)
                      ++++-
T Consensus       326 ~l~Hp  330 (388)
T 3oz6_A          326 ALKHP  330 (388)
T ss_dssp             HTTST
T ss_pred             HhCCH
Confidence            99863

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.4e-31  Score=251.74  Aligned_cols=198  Identities=17%  Similarity=0.258  Sum_probs=146.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+.....  ......+.+|+.++..++|||||++++++.... .++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36899999999999999999995 6799999999864321  122357889999999999999999999988766 8899


Q ss_pred             EEccCCCChhhhhhhc-------------------------------cCC------CCceeE--------------EEee
Q 048684          171 LELSPHGSLASLLYAK-------------------------------WLP------DKWTHH--------------IVSK  199 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-------------------------------~~~------~~~~~~--------------~~~~  199 (363)
                      |||+ +|+|.+++...                               ..+      ......              ....
T Consensus        88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~  166 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT  166 (336)
T ss_dssp             ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCC
T ss_pred             EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccc
Confidence            9999 68888876311                               000      000000              1123


Q ss_pred             cccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+........ .+.. ....++...+    ..+.+++.
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-~i~~-~~~~~p~~~s----~~~~~li~  240 (336)
T 3h4j_B          167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-KVNS-CVYVMPDFLS----PGAQSLIR  240 (336)
T ss_dssp             CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-CCCS-SCCCCCTTSC----HHHHHHHH
T ss_pred             ccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-HHHc-CCCCCcccCC----HHHHHHHH
Confidence            469999999999988776 789999999999999999999997653221110 0000 0111222233    44899999


Q ss_pred             HccccCCCCCCCHHHHHHHhh
Q 048684          279 ACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.+|||+.+++++-+
T Consensus       241 ~~L~~dP~~Rpt~~eil~hp~  261 (336)
T 3h4j_B          241 RMIVADPMQRITIQEIRRDPW  261 (336)
T ss_dssp             TTSCSSGGGSCCHHHHTTCHH
T ss_pred             HHcCCChhHCcCHHHHHhChh
Confidence            999999999999999997543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=8.2e-31  Score=241.74  Aligned_cols=202  Identities=20%  Similarity=0.313  Sum_probs=133.0

Q ss_pred             HhcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...++|.+.+.||+|+||+||+|. ..+|+.||||.+...........+.+|+.++..++||||+++++++...+ .++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            445789999999999999999998 45789999999875543444577899999999999999999999887655 8999


Q ss_pred             EEccCCCChhhhhhhc----------------------------------c-----------CCCCceeE----------
Q 048684          171 LELSPHGSLASLLYAK----------------------------------W-----------LPDKWTHH----------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~----------------------------------~-----------~~~~~~~~----------  195 (363)
                      |||+++|+|.+++...                                  .           +.......          
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            9999999998876410                                  0           00000000          


Q ss_pred             ----------EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------
Q 048684          196 ----------IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------  258 (363)
Q Consensus       196 ----------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------  258 (363)
                                ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..................      
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV  251 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence                      1123458999999999976 56899999999999999999999999876544333322222111      


Q ss_pred             --CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 --PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 --~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                        +.....++    ..+.+++.+||+.||.+|||+.+++++-
T Consensus       252 ~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~  289 (303)
T 2vwi_A          252 QDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRHK  289 (303)
T ss_dssp             ---CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred             ccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence              11112233    4489999999999999999999999754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=6.9e-31  Score=250.53  Aligned_cols=191  Identities=18%  Similarity=0.248  Sum_probs=138.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHH-HHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGI-IVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|...+.||+|+||.||+|+. .+++.||||.+.....  ......+..|..+ +..++|||||++++++.+.. .|+|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            5799999999999999999995 5689999999975431  2234567778776 46789999999999888766 8999


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCce---------------eEEEe
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWT---------------HHIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------------~~~~~  198 (363)
                      ||||++|+|.+++....                                     +.....               .....
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~  197 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS  197 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence            99999999988774110                                     000000               01123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|..||.+..............  ..++...+.    .+.+|+.
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~----~~~~li~  271 (373)
T 2r5t_A          198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKPNITN----SARHLLE  271 (373)
T ss_dssp             SBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--CCCCSSSCH----HHHHHHH
T ss_pred             cccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCH----HHHHHHH
Confidence            4579999999999999999999999999999999999999998776554444433332  222333444    4899999


Q ss_pred             HccccCCCCCCCHH
Q 048684          279 ACINQTSACRPQMS  292 (363)
Q Consensus       279 ~cl~~dP~~RPt~~  292 (363)
                      +||+.||.+||++.
T Consensus       272 ~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          272 GLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHTCSSGGGSTTTT
T ss_pred             HHcccCHHhCCCCC
Confidence            99999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=1e-30  Score=239.45  Aligned_cols=196  Identities=25%  Similarity=0.359  Sum_probs=149.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||+||+|.. .++..||||.+.....  ......+.+|+.++..++||||+++++++.+.. .++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5789999999999999999985 4688999999864321  122467889999999999999999999988766 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE-------------EEeecc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH-------------IVSKIE  201 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~-------------~~~~~~  201 (363)
                      ||+++|+|.+++....                                     +.......             ......
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  173 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMC  173 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCC
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccccccccc
Confidence            9999999988774110                                     00000000             012346


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..||...............  +..++...+.    .+.+++..||
T Consensus       174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~li~~~l  247 (284)
T 2vgo_A          174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSD----GSKDLISKLL  247 (284)
T ss_dssp             SCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCH----HHHHHHHHHS
T ss_pred             CCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--ccCCCCcCCH----HHHHHHHHHh
Confidence            899999999999999999999999999999999999999876544333222221  2223333444    4899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.||.+|||+.+++++
T Consensus       248 ~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          248 RYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CSSGGGSCCHHHHHTC
T ss_pred             hcCHhhCCCHHHHhhC
Confidence            9999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.96  E-value=2.6e-31  Score=248.50  Aligned_cols=203  Identities=17%  Similarity=0.224  Sum_probs=141.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.++..++|||||++++++.... .++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5788999999999999999996 4789999999975443332335668999999999999999999887765 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCCCce---------------eEEEeec
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPDKWT---------------HHIVSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~~~~---------------~~~~~~~  200 (363)
                      +. |+|.+++....                                      +.....               .......
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  160 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE  160 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence            98 47777654110                                      000000               0011223


Q ss_pred             ccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC---CCC------------
Q 048684          201 EGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL---GDA------------  264 (363)
Q Consensus       201 ~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---~~~------------  264 (363)
                      +||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+................+..   +..            
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (324)
T 3mtl_A          161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP  240 (324)
T ss_dssp             --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC
T ss_pred             cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccc
Confidence            58999999999976 56899999999999999999999999876544333222221111100   000            


Q ss_pred             ---------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          265 ---------YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       265 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                               ........+.+|+.+||+.||.+|||+.|++++-+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  284 (324)
T 3mtl_A          241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF  284 (324)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence                     00112345889999999999999999999998543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=2.5e-31  Score=247.17  Aligned_cols=201  Identities=20%  Similarity=0.335  Sum_probs=145.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCeE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE-----GGMH  168 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~  168 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||.+.... ......+.+|+.++..++||||+++++++..     ...+
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            35799999999999999999985 679999999986543 3346789999999999999999999998762     2378


Q ss_pred             EEEEccCCCChhhhhhhc-----cCC------------------------------------CCceeEEE----------
Q 048684          169 LILELSPHGSLASLLYAK-----WLP------------------------------------DKWTHHIV----------  197 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-----~~~------------------------------------~~~~~~~~----------  197 (363)
                      +||||+++|+|.+++...     .++                                    ......+.          
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence            999999999998877521     000                                    00000000          


Q ss_pred             --------------eecccccCCCCchhhccCC---CCccceEEechhHHHHHHhCCCCCCCchhh--HHHHHhhhhhcC
Q 048684          198 --------------SKIEGTFGYLPPEFFMHGI---ADEKTDVYAYGVLLLEIITGRQALDSSQKS--LVMWSSMKELVD  258 (363)
Q Consensus       198 --------------~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~P~~~~~~~--~~~~~~~~~~~~  258 (363)
                                    ....||+.|+|||++....   ++.++|||||||++|||++|+.||......  .... .......
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~  265 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-AVQNQLS  265 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-HHHCC--
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-HhhccCC
Confidence                          0123689999999997554   789999999999999999999999642111  1111 1111111


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ......++    ..+.+++..||+.||.+|||+.++++.|+..
T Consensus       266 ~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          266 IPQSPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCccccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            11122234    4499999999999999999999999998654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=2.3e-30  Score=237.86  Aligned_cols=198  Identities=22%  Similarity=0.341  Sum_probs=148.1

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----C-eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG----G-MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~-~~l  169 (363)
                      .|...+.||+|+||+||+|.. .++..||+|.+.... .......+.+|+.++..++||||+++++++...    . .++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            477778899999999999985 568899999986433 344567899999999999999999999987642    2 789


Q ss_pred             EEEccCCCChhhhhhh-------------------------c---cCCC------------CceeE-------------E
Q 048684          170 ILELSPHGSLASLLYA-------------------------K---WLPD------------KWTHH-------------I  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~-------------------------~---~~~~------------~~~~~-------------~  196 (363)
                      ||||+++|+|.+++..                         .   ....            .....             .
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~  186 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence            9999999999888742                         0   0000            00000             0


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-cCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-TLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~  275 (363)
                      .....||+.|+|||++. +.++.++|||||||++|+|++|+.||............+.....+ ......++    .+.+
T Consensus       187 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~  261 (290)
T 1t4h_A          187 AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP----EVKE  261 (290)
T ss_dssp             BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH----HHHH
T ss_pred             cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH----HHHH
Confidence            12245899999999886 569999999999999999999999998755444433333332222 22222333    4899


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhh
Q 048684          276 IASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ++..||+.||.+|||+.+++++-.
T Consensus       262 li~~~l~~dp~~Rps~~ell~h~~  285 (290)
T 1t4h_A          262 IIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHccCChhhCCCHHHHhhCcc
Confidence            999999999999999999997643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=8.4e-31  Score=245.35  Aligned_cols=194  Identities=20%  Similarity=0.258  Sum_probs=127.2

Q ss_pred             CCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEccCCC
Q 048684          101 ENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILELSPHG  177 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~~~~g  177 (363)
                      .+.||+|+||+||+|.. .+|+.||||.+...    ....+.+|+.++..+. |||||++++++.+.. .++|||||++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            47899999999999985 56899999999643    2467789999999997 999999999988776 88999999999


Q ss_pred             Chhhhhhhcc-------------------------------CCCCc---------e---------------eEEEeeccc
Q 048684          178 SLASLLYAKW-------------------------------LPDKW---------T---------------HHIVSKIEG  202 (363)
Q Consensus       178 sL~~~l~~~~-------------------------------~~~~~---------~---------------~~~~~~~~g  202 (363)
                      +|.+++....                               .+...         .               .......+|
T Consensus        92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  171 (325)
T 3kn6_A           92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF  171 (325)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCC
Confidence            9988874210                               00000         0               001123468


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh------HHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS------LVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||......      ......+... ...+........+..+.+|
T Consensus       172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~l  250 (325)
T 3kn6_A          172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG-DFSFEGEAWKNVSQEAKDL  250 (325)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT-CCCCCSHHHHTSCHHHHHH
T ss_pred             CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC-CCCCCcccccCCCHHHHHH
Confidence            99999999999999999999999999999999999999864321      1111111111 1111111112234569999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhh
Q 048684          277 ASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +..||+.||.+|||+.+++++-+
T Consensus       251 i~~~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          251 IQGLLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             HHHHHCCCTTTCCCTTTSTTCGG
T ss_pred             HHHHCCCChhHCCCHHHHhcChh
Confidence            99999999999999999997543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=8e-31  Score=239.60  Aligned_cols=197  Identities=20%  Similarity=0.271  Sum_probs=149.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..+ +||||+++++++.+.+ .++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46799999999999999999996 479999999997543 233457889999999999 8999999999888766 8899


Q ss_pred             EEccCCCChhhhhhhcc-----------------------------------------CC-------------------C
Q 048684          171 LELSPHGSLASLLYAKW-----------------------------------------LP-------------------D  190 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-----------------------------------------~~-------------------~  190 (363)
                      |||+++|+|.+++....                                         +.                   .
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            99999999998874210                                         00                   0


Q ss_pred             CceeEE-----------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC
Q 048684          191 KWTHHI-----------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD  258 (363)
Q Consensus       191 ~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~  258 (363)
                      .....+           .....||+.|+|||++.+. .++.++|||||||++|+|++|.+|+.....    +..+.....
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~~~~~  245 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEIRQGRL  245 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----HHHHHTTCC
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----HHHHHcCCC
Confidence            000000           0112489999999999876 677899999999999999999988765432    222233333


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +.++...+..    +.+++..||+.||.+|||+.+++++-.
T Consensus       246 ~~~~~~~~~~----~~~li~~~l~~dp~~Rps~~~ll~h~~  282 (289)
T 1x8b_A          246 PRIPQVLSQE----FTELLKVMIHPDPERRPSAMALVKHSV  282 (289)
T ss_dssp             CCCSSCCCHH----HHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred             CCCCcccCHH----HHHHHHHHhCCCcccCCCHHHHhhChH
Confidence            4444445554    999999999999999999999997643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=5.1e-31  Score=240.57  Aligned_cols=198  Identities=21%  Similarity=0.349  Sum_probs=129.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+.....  ......+.+|+.++..++||||+++++++.+.. .++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            5799999999999999999985 6799999999864321  123467899999999999999999999988766 78999


Q ss_pred             EccCCCChhhhhhhcc--------------------------------------CCCCcee---------------EEEe
Q 048684          172 ELSPHGSLASLLYAKW--------------------------------------LPDKWTH---------------HIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~---------------~~~~  198 (363)
                      ||+++|+|.+++....                                      +......               ....
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  170 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY  170 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence            9999999988774210                                      0000000               0112


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|+.||..............  .+...+...+    ..+.+++.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~li~  244 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL--ADYEMPSFLS----IEAKDLIH  244 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS--SCCCCCTTSC----HHHHHHHH
T ss_pred             eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh--cccCCccccC----HHHHHHHH
Confidence            34689999999999999999999999999999999999999986543322211111  1112222333    44899999


Q ss_pred             HccccCCCCCCCHHHHHHHhh
Q 048684          279 ACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.+|||+.+++++-.
T Consensus       245 ~~l~~dp~~Rps~~~~l~h~~  265 (278)
T 3cok_A          245 QLLRRNPADRLSLSSVLDHPF  265 (278)
T ss_dssp             HHSCSSGGGSCCHHHHTTSTT
T ss_pred             HHcccCHhhCCCHHHHhcCcc
Confidence            999999999999999997543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=3.6e-31  Score=260.88  Aligned_cols=199  Identities=21%  Similarity=0.299  Sum_probs=151.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...++||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++.+++|||||++++++.+.. .++||
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5789999999999999999985 479999999986543  1234578999999999999999999999988766 88999


Q ss_pred             EccCCCChhhhhhhc--------------------------c-----------C---CCCceeEE--------------E
Q 048684          172 ELSPHGSLASLLYAK--------------------------W-----------L---PDKWTHHI--------------V  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--------------------------~-----------~---~~~~~~~~--------------~  197 (363)
                      |||.+|+|.+++...                          .           +   .......+              .
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  185 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM  185 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc
Confidence            999999998876311                          0           0   00000000              1


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+...................+  .....+..+.+++
T Consensus       186 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li  262 (484)
T 3nyv_A          186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELP--QWKKVSESAKDLI  262 (484)
T ss_dssp             HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSG--GGGGSCHHHHHHH
T ss_pred             ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCc--ccccCCHHHHHHH
Confidence            12359999999999865 69999999999999999999999998876554444433333222111  1123345599999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||+.||.+|||+.+++++
T Consensus       263 ~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHCCCChhHCcCHHHHhhC
Confidence            99999999999999999974

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=1.5e-30  Score=245.39  Aligned_cols=201  Identities=14%  Similarity=0.120  Sum_probs=140.3

Q ss_pred             CCCccCCcccccCceEEEEEEEc----CCcEEEEEEecCCCchh----------HHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRGSPEE----------MTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      ++|.+.+.||+|+||+||+|...    ++..||||.+.......          ....+.+|+.++..++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            67999999999999999999964    57889999987654221          11236788899999999999999998


Q ss_pred             EEc----CC-eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCc--eeEE-
Q 048684          162 GVE----GG-MHLILELSPHGSLASLLYAKW-------------------------------------LPDKW--THHI-  196 (363)
Q Consensus       162 ~~~----~~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~--~~~~-  196 (363)
                      +..    .. .++||||| +|+|.+++....                                     +....  ...+ 
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~  195 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA  195 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence            776    33 78999999 999988774110                                     00000  0000 


Q ss_pred             ---------------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh
Q 048684          197 ---------------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE  255 (363)
Q Consensus       197 ---------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~  255 (363)
                                           .....||+.|+|||++.+..++.++|||||||++|||+||+.||...............
T Consensus       196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  275 (345)
T 2v62_A          196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT  275 (345)
T ss_dssp             CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred             eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence                                 02346899999999999999999999999999999999999999653222211111111


Q ss_pred             hcCCcCC---------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          256 LVDPTLG---------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       256 ~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ...+.++         ...+.    .+.+++..||+.||.+|||+.+|++.|+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          276 NLLDELPQSVLKWAPSGSSCC----EIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHTTTHHHHHHSCTTSCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             hhcccccHHHHhhccccccHH----HHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            1101110         12333    499999999999999999999999999754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=1.2e-30  Score=244.59  Aligned_cols=204  Identities=18%  Similarity=0.253  Sum_probs=144.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ..++|...+.||+|+||+||+|.. .+|+.||||.+..... ......+.+|+.++.+++|||||++++++.... .++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            346899999999999999999984 5789999999975442 233567889999999999999999999888766 8899


Q ss_pred             EEccCCCChhhhhhhc--------------------------c-----CCCCce-----------e--------------
Q 048684          171 LELSPHGSLASLLYAK--------------------------W-----LPDKWT-----------H--------------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~--------------------------~-----~~~~~~-----------~--------------  194 (363)
                      |||+.+ +|.+++...                          .     .+....           .              
T Consensus       112 ~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          112 FEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             EECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             EecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            999984 888776411                          0     000000           0              


Q ss_pred             -EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC----------
Q 048684          195 -HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG----------  262 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----------  262 (363)
                       ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||..................+...          
T Consensus       191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (329)
T 3gbz_A          191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD  270 (329)
T ss_dssp             ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence             011223579999999999875 48999999999999999999999998766544443333221111100          


Q ss_pred             --CCC------------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          263 --DAY------------NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       263 --~~~------------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                        ..+            .......+.+|+.+||+.||.+|||+.+++++-
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  320 (329)
T 3gbz_A          271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP  320 (329)
T ss_dssp             CCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             hhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence              000            000235688999999999999999999999753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=3.4e-30  Score=237.17  Aligned_cols=197  Identities=16%  Similarity=0.279  Sum_probs=151.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||+||++.. .+|+.||+|.+....  .....+.+.+|+.+++.++||||+++++++.+.+ .++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            5788999999999999999996 458899999986432  3344678899999999999999999999988776 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE---------------EEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------------IVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------------~~~~  199 (363)
                      ||+++++|.+++....                                     +.......               ....
T Consensus        95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV  174 (294)
T ss_dssp             ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccccc
Confidence            9999999988764110                                     00000000               0122


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..||+.|+|||++.+..++.++|||||||++|+|+||+.||...............  ...++...+.    .+.+++.+
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~li~~  248 (294)
T 2rku_A          175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINP----VAASLIQK  248 (294)
T ss_dssp             CCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCH----HHHHHHHH
T ss_pred             ccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cCCCccccCH----HHHHHHHH
Confidence            45899999999999999999999999999999999999999876544333222222  1222333444    48999999


Q ss_pred             ccccCCCCCCCHHHHHHHh
Q 048684          280 CINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L  298 (363)
                      ||+.||.+|||+.+++++.
T Consensus       249 ~l~~~p~~Rps~~~ll~~~  267 (294)
T 2rku_A          249 MLQTDPTARPTINELLNDE  267 (294)
T ss_dssp             HTCSSGGGSCCGGGGGGSH
T ss_pred             HcccChhhCcCHHHHhhCh
Confidence            9999999999999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.1e-30  Score=248.60  Aligned_cols=204  Identities=19%  Similarity=0.225  Sum_probs=143.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .....+.+.+|+.+++.++|||||++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46899999999999999999985 679999999996543 3444678899999999999999999999887542      


Q ss_pred             -eEEEEEccCCCChhhhhhhccCC------------------------------------CCceeE------------EE
Q 048684          167 -MHLILELSPHGSLASLLYAKWLP------------------------------------DKWTHH------------IV  197 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~~------------------------------------~~~~~~------------~~  197 (363)
                       .|+||||+ +++|.+++....++                                    ......            ..
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  182 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM  182 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC
T ss_pred             eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccccc
Confidence             59999999 78998876421110                                    000000            01


Q ss_pred             eecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----------------
Q 048684          198 SKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----------------  259 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----------------  259 (363)
                      ...+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..............+                 
T Consensus       183 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  262 (367)
T 1cm8_A          183 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM  262 (367)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH
T ss_pred             CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHH
Confidence            23468999999999987 679999999999999999999999998765433222221111000                 


Q ss_pred             ----cC-CC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 ----TL-GD---AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 ----~~-~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                          .. ..   .........+.+|+.+||+.||.+|||+.+++++-.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~  310 (367)
T 1cm8_A          263 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  310 (367)
T ss_dssp             HHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence                00 00   011122345899999999999999999999998643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=3.7e-30  Score=236.91  Aligned_cols=198  Identities=16%  Similarity=0.159  Sum_probs=148.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.....   ...+.+|+.++..+ +|+||+++++++.... .++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            36799999999999999999984 6799999999865432   24678899999999 7999999999988766 78999


Q ss_pred             EccCCCChhhhhhhcc--------------------------------------CCCCc-----eeE-------------
Q 048684          172 ELSPHGSLASLLYAKW--------------------------------------LPDKW-----THH-------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--------------------------------------~~~~~-----~~~-------------  195 (363)
                      ||+ +|+|.+++....                                      +....     ...             
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            999 999998875110                                      00000     000             


Q ss_pred             ---------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh---hHHHHHhhhhhcC---Cc
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK---SLVMWSSMKELVD---PT  260 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---~~~~~~~~~~~~~---~~  260 (363)
                               ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .............   +.
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE  244 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence                     01234589999999999999999999999999999999999999987431   1111111111111   11


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          261 LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       261 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +...++.    .+.+++..||+.||.+|||+.+|++.|+.
T Consensus       245 ~~~~~~~----~l~~li~~~l~~dp~~RP~~~~l~~~l~~  280 (298)
T 1csn_A          245 LCAGFPE----EFYKYMHYARNLAFDATPDYDYLQGLFSK  280 (298)
T ss_dssp             HTTTSCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             HHhhCcH----HHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence            1122343    49999999999999999999999998864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=5.5e-30  Score=243.64  Aligned_cols=204  Identities=22%  Similarity=0.289  Sum_probs=151.3

Q ss_pred             HHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-------hhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 048684           91 LQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-------EEMTTDYLSELGIIVHV-DHPNIAKMIGY  161 (363)
Q Consensus        91 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l-~H~niv~l~~~  161 (363)
                      .....++|...+.||+|+||.||+|.. .+|+.||||++.....       ....+.+.+|+.++.++ +||||++++++
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            344557899999999999999999996 4799999999865431       12345688999999999 79999999999


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCce---------e
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWT---------H  194 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~---------~  194 (363)
                      +.... .++||||+++|+|.+++....                                     +.....         .
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence            88766 899999999999988774110                                     000000         0


Q ss_pred             -----EEEeecccccCCCCchhhcc------CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC--
Q 048684          195 -----HIVSKIEGTFGYLPPEFFMH------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL--  261 (363)
Q Consensus       195 -----~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--  261 (363)
                           ......+||+.|+|||++.+      ..++.++|||||||++|||+||+.||.....................  
T Consensus       249 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  328 (365)
T 2y7j_A          249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPE  328 (365)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             ccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence                 01123569999999999863      35899999999999999999999999876544333322222221110  


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ....    +..+.+++.+||+.||.+|||+.+++++-
T Consensus       329 ~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~hp  361 (365)
T 2y7j_A          329 WDDR----SSTVKDLISRLLQVDPEARLTAEQALQHP  361 (365)
T ss_dssp             HSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             cccC----CHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence            0112    34489999999999999999999999753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=8.7e-31  Score=248.84  Aligned_cols=204  Identities=16%  Similarity=0.210  Sum_probs=148.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------Ce
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------GM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~  167 (363)
                      .++|...+.||+|+||+||+|.. .+|..||||.+...........+.+|+.++.+++||||+++++++...      ..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            46899999999999999999985 568899999998655555567899999999999999999999988653      37


Q ss_pred             EEEEEccCCCChhhhhhhccCC------------------------------------CCceeE----------------
Q 048684          168 HLILELSPHGSLASLLYAKWLP------------------------------------DKWTHH----------------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~~------------------------------------~~~~~~----------------  195 (363)
                      ++||||+. |+|.+++....++                                    ......                
T Consensus       106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  184 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH  184 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred             EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence            89999998 4888766421100                                    000000                


Q ss_pred             --EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc------------
Q 048684          196 --IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT------------  260 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~------------  260 (363)
                        .....+||+.|+|||++.+. .++.++|||||||++|||+||++||.+................+.            
T Consensus       185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  264 (364)
T 3qyz_A          185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA  264 (364)
T ss_dssp             CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhH
Confidence              01234689999999987654 589999999999999999999999987654333222211110000            


Q ss_pred             --------CCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          261 --------LGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       261 --------~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                              .....+     ......+.+|+.+||+.||.+|||+.+++++-.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  316 (364)
T 3qyz_A          265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  316 (364)
T ss_dssp             HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence                    000000     112345899999999999999999999998644

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=5.3e-30  Score=233.46  Aligned_cols=197  Identities=16%  Similarity=0.275  Sum_probs=142.8

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|.+.+.||+|+||.||+|... +|+.||||.+....  .......+.+|+.++..++||||+++++++.... .++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            368999999999999999999964 79999999986432  1123567899999999999999999999888766 8899


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCcee--------------EEEee
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKWTH--------------HIVSK  199 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~--------------~~~~~  199 (363)
                      |||+++++|.+++....                                     +......              .....
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  169 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT  169 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence            99999999988874110                                     0000000              11123


Q ss_pred             cccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..||+.|+|||++.+..+ +.++||||||+++|+|++|+.||........... +.... ..++...+.    .+.+++.
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~-~~~~~~~~~----~l~~li~  243 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-IRGGV-FYIPEYLNR----SVATLLM  243 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHCC-CCCCTTSCH----HHHHHHH
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-hhcCc-ccCchhcCH----HHHHHHH
Confidence            458999999999987765 6899999999999999999999987654433222 22211 122233344    4899999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.+++++
T Consensus       244 ~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          244 HMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHTCSSGGGSCCHHHHHHS
T ss_pred             HHccCChhhCCCHHHHHhC
Confidence            9999999999999999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=1.6e-30  Score=243.70  Aligned_cols=203  Identities=18%  Similarity=0.295  Sum_probs=148.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|...+.||+|+||+||+|.. .+|+.||||.+.... .....+.+.+|+.++..++||||+++++++.+.. .++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            5789999999999999999996 458999999986544 3334567889999999999999999999988776 789999


Q ss_pred             ccCCCChhhhhhh-------------------------c-c-----------CCCCce---------------eEEEeec
Q 048684          173 LSPHGSLASLLYA-------------------------K-W-----------LPDKWT---------------HHIVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~-------------------------~-~-----------~~~~~~---------------~~~~~~~  200 (363)
                      |+++++|.+++..                         . .           +.....               .......
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  184 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE  184 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------C
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCC
Confidence            9999888776420                         0 0           000000               0112234


Q ss_pred             ccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh--------------------hcCC
Q 048684          201 EGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE--------------------LVDP  259 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~--------------------~~~~  259 (363)
                      .||+.|+|||++.+. .++.++|||||||++|+|++|+.||...............                    ...+
T Consensus       185 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (331)
T 4aaa_A          185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLP  264 (331)
T ss_dssp             CCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCC
T ss_pred             cCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCc
Confidence            689999999999875 7899999999999999999999999876543332221110                    0111


Q ss_pred             cCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          260 TLGDAYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       260 ~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+....+     +..+..+.+|+.+||+.||.+|||+.+++++-
T Consensus       265 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  308 (331)
T 4aaa_A          265 EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD  308 (331)
T ss_dssp             CCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             cccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence            1111111     12345699999999999999999999999753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=4.2e-31  Score=245.76  Aligned_cols=209  Identities=18%  Similarity=0.259  Sum_probs=154.4

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~  167 (363)
                      +.....++|...+.||+|+||+||+|....  .||||.+.... .....+.|.+|+.++.+++||||+++++++.+.. .
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  104 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL  104 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence            334456789999999999999999998753  49999987443 2222456788999999999999999999888765 8


Q ss_pred             EEEEEccCCCChhhhhhhcc--C------------------------------CCCc-----ee----------------
Q 048684          168 HLILELSPHGSLASLLYAKW--L------------------------------PDKW-----TH----------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~--~------------------------------~~~~-----~~----------------  194 (363)
                      ++||||+++|+|.+++....  +                              +...     ..                
T Consensus       105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~  184 (319)
T 2y4i_B          105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQA  184 (319)
T ss_dssp             EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC-------
T ss_pred             EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccc
Confidence            99999999999998875211  0                              0000     00                


Q ss_pred             ----EEEeecccccCCCCchhhcc---------CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC
Q 048684          195 ----HIVSKIEGTFGYLPPEFFMH---------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                          .......||+.|+|||++..         ..++.++|||||||++|||+||+.||.........+...........
T Consensus       185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  264 (319)
T 2y4i_B          185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS  264 (319)
T ss_dssp             ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC
T ss_pred             cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC
Confidence                00112248899999999974         45799999999999999999999999877665554444333222222


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcChHH
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEA  304 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  304 (363)
                      ....+.+    +.+++..||+.||.+|||+.++++.|+.....
T Consensus       265 ~~~~~~~----l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          265 QIGMGKE----ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             CSSCCTT----HHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             cCCCCHH----HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            2223333    88999999999999999999999999877543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=4.5e-30  Score=238.73  Aligned_cols=193  Identities=22%  Similarity=0.314  Sum_probs=139.5

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCC-chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|+..++||+|+||+||+|... +|+.||||++.... .......+..|+..+.++ +|||||++++++.++. .++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999964 79999999986543 333345666777766665 8999999999988776 88999


Q ss_pred             EccCCCChhhhhhhccCC--------------------------------------CCc--------------eeEEEee
Q 048684          172 ELSPHGSLASLLYAKWLP--------------------------------------DKW--------------THHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~--------------------------------------~~~--------------~~~~~~~  199 (363)
                      ||+ +|+|.+++......                                      ...              .......
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  215 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV  215 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence            999 66887766421000                                      000              0001123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh-hhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK-ELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..||+.|+|||++.+ .++.++|||||||++|||++|..|+.....    +..+. ....+.+....+    ..+.+++.
T Consensus       216 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~l~~li~  286 (311)
T 3p1a_A          216 QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPPEFTAGLS----SELRSVLV  286 (311)
T ss_dssp             CCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTTCCCHHHHTTSC----HHHHHHHH
T ss_pred             cCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhccCCCcccccCCC----HHHHHHHH
Confidence            458999999999875 799999999999999999999777655322    12211 111111222233    45999999


Q ss_pred             HccccCCCCCCCHHHHHHHh
Q 048684          279 ACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L  298 (363)
                      +||+.||.+|||+.+++++-
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp  306 (311)
T 3p1a_A          287 MMLEPDPKLRATAEALLALP  306 (311)
T ss_dssp             HHSCSSTTTSCCHHHHHTSG
T ss_pred             HHcCCChhhCcCHHHHHhCc
Confidence            99999999999999999753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.7e-30  Score=240.65  Aligned_cols=207  Identities=18%  Similarity=0.262  Sum_probs=143.4

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      ...++|...+.||+|+||+||+|.. .+|+.||||.+......    .....+.+|+.++..++|||||++++++.... 
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            3457899999999999999999995 56999999999753321    12346889999999999999999999887655 


Q ss_pred             eEEEEEccCCCChhhhhhhcc--C------------------------------------CCCcee--------------
Q 048684          167 MHLILELSPHGSLASLLYAKW--L------------------------------------PDKWTH--------------  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~--~------------------------------------~~~~~~--------------  194 (363)
                      .++||||+.+ +|.+++....  +                                    ......              
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence            8999999986 7776654210  0                                    000000              


Q ss_pred             -EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC---C------
Q 048684          195 -HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG---D------  263 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---~------  263 (363)
                       ......+||+.|+|||++.+. .++.++|||||||++|||++|.+||.+................+...   .      
T Consensus       166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  245 (346)
T 1ua2_A          166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD  245 (346)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred             cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence             011234689999999999764 58999999999999999999999998765544433333222111100   0      


Q ss_pred             --------CCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          264 --------AYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       264 --------~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                              ..+     ......+.+++.+||+.||.+|||+.|++++-..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence                    000     1223569999999999999999999999987553

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=1.5e-30  Score=247.20  Aligned_cols=202  Identities=13%  Similarity=0.134  Sum_probs=142.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcC------CcEEEEEEecCCCchh----------HHHHHHHHHHHHHhCCCCCcce
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLED------GQFVAIKRLTRGSPEE----------MTTDYLSELGIIVHVDHPNIAK  157 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~  157 (363)
                      ..++|.+.+.||+|+||+||+|...+      ++.||||.+.......          ....+..|+..+..++|||||+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34689999999999999999998644      4789999987654211          0112445666777889999999


Q ss_pred             EEEEEEcC-----CeEEEEEccCCCChhhhhhhcc--------------------------------------CC--CCc
Q 048684          158 MIGYGVEG-----GMHLILELSPHGSLASLLYAKW--------------------------------------LP--DKW  192 (363)
Q Consensus       158 l~~~~~~~-----~~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~--~~~  192 (363)
                      +++++...     ..++||||| +|+|.+++....                                      +.  ...
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence            99987653     278999999 999998874210                                      00  000


Q ss_pred             eeEE----------------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH
Q 048684          193 THHI----------------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW  250 (363)
Q Consensus       193 ~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~  250 (363)
                      ...+                      ....+||+.|+|||++.+..++.++|||||||++|||+||+.||.+........
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            0000                      012349999999999999999999999999999999999999998643221111


Q ss_pred             H--------hhhhhcCCcCC-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          251 S--------SMKELVDPTLG-DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       251 ~--------~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .        .+....++.+. ...+.    .+.+++..||+.||.+||++.+|++.|+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          272 RDSKIRYRENIASLMDKCFPAANAPG----EIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             HHHHHHHHHCHHHHHHHHSCTTCCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHhhhhHHHHHHHhcccccCHH----HHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            1        11122222211 22344    48999999999999999999999998864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=2.3e-30  Score=242.38  Aligned_cols=212  Identities=17%  Similarity=0.199  Sum_probs=155.5

Q ss_pred             cCHHHHHHhcCCCccC-CcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 048684           86 FALSELQAATDNFSHE-NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVD-HPNIAKMIGY  161 (363)
Q Consensus        86 ~~~~~l~~~~~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~  161 (363)
                      +.+.......+.|.+. +.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..+. ||||++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3344445556677777 8899999999999985 469999999987533 2233578999999999995 6999999999


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhc---------------------------------------cCCC---CceeE---
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAK---------------------------------------WLPD---KWTHH---  195 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~---------------------------------------~~~~---~~~~~---  195 (363)
                      +.... .++|||||++|+|.+++...                                       .+..   .....   
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            88766 88999999999998887310                                       0000   00000   


Q ss_pred             -----------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCC
Q 048684          196 -----------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA  264 (363)
Q Consensus       196 -----------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~  264 (363)
                                 .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...................  ...
T Consensus       178 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~  255 (327)
T 3lm5_A          178 FGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY--SEE  255 (327)
T ss_dssp             GGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTT
T ss_pred             CccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccccc--Cch
Confidence                       1123469999999999999999999999999999999999999998765544433332222211  111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       265 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ........+.+++..||+.||.+|||+.+++++-.
T Consensus       256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW  290 (327)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred             hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence            12223445899999999999999999999997543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=2.8e-30  Score=242.65  Aligned_cols=196  Identities=16%  Similarity=0.285  Sum_probs=151.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....  .....+.+.+|+.++..++||||+++++++.+.+ .++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            5788999999999999999985 458899999986432  3344678899999999999999999999988776 78999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCceeE---------------EEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKWTHH---------------IVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~---------------~~~~  199 (363)
                      ||+.+++|.+++....                                     +.......               ....
T Consensus       121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  200 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV  200 (335)
T ss_dssp             CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccc
Confidence            9999999988764110                                     00000000               1122


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||...............  ...++...+.    .+.+++.+
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~li~~  274 (335)
T 2owb_A          201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINP----VAASLIQK  274 (335)
T ss_dssp             CCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCH----HHHHHHHH
T ss_pred             cCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCCccCCH----HHHHHHHH
Confidence            46899999999999999999999999999999999999999876543333222222  1223333444    48899999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+|||+.+++++
T Consensus       275 ~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          275 MLQTDPTARPTINELLND  292 (335)
T ss_dssp             HTCSSGGGSCCGGGGGGS
T ss_pred             HccCChhHCcCHHHHhcC
Confidence            999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=1.4e-30  Score=241.39  Aligned_cols=205  Identities=17%  Similarity=0.239  Sum_probs=145.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC----chhHHHHHHHHHHHHHhC---CCCCcceEEEEEEcC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS----PEEMTTDYLSELGIIVHV---DHPNIAKMIGYGVEG  165 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~  165 (363)
                      ..++|.+.+.||+|+||+||+|.. .+|+.||||.+....    .......+.+|+.++..+   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999994 679999999986322    111234566777777766   499999999988764


Q ss_pred             C------eEEEEEccCCCChhhhhhhcc---------------------------------CCC------Ccee------
Q 048684          166 G------MHLILELSPHGSLASLLYAKW---------------------------------LPD------KWTH------  194 (363)
Q Consensus       166 ~------~~lv~E~~~~gsL~~~l~~~~---------------------------------~~~------~~~~------  194 (363)
                      .      .++||||+. |+|.+++....                                 .+.      ....      
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  165 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG  165 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence            3      689999998 58888764210                                 000      0000      


Q ss_pred             --------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC---CC
Q 048684          195 --------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL---GD  263 (363)
Q Consensus       195 --------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---~~  263 (363)
                              ......+||+.|+|||++.+..++.++|||||||++|||++|++||.+................+..   +.
T Consensus       166 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (308)
T 3g33_A          166 LARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR  245 (308)
T ss_dssp             CTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred             cccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence                    0112346899999999999999999999999999999999999999876654443333222111100   00


Q ss_pred             C------------------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          264 A------------------YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       264 ~------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .                  ..+.....+.+++.+||+.||.+|||+.+++++-+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~  299 (308)
T 3g33_A          246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY  299 (308)
T ss_dssp             SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred             hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence            0                  00123355899999999999999999999997643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=2.5e-30  Score=240.32  Aligned_cols=209  Identities=19%  Similarity=0.307  Sum_probs=149.9

Q ss_pred             ccCHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCC--CCCcceEEEE
Q 048684           85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVD--HPNIAKMIGY  161 (363)
Q Consensus        85 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~  161 (363)
                      .+.+..+....++|.+.+.||+|+||.||++...+|+.||||.+.... .......+.+|+.++.+++  ||||++++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            344444455567899999999999999999998789999999997543 3445678999999999997  5999999999


Q ss_pred             EEcCC-eEEEEEccCCCChhhhhhhcc--------------------------C-----CC-----Cc------------
Q 048684          162 GVEGG-MHLILELSPHGSLASLLYAKW--------------------------L-----PD-----KW------------  192 (363)
Q Consensus       162 ~~~~~-~~lv~E~~~~gsL~~~l~~~~--------------------------~-----~~-----~~------------  192 (363)
                      +.... .++||| +.+|+|.+++....                          .     +.     ..            
T Consensus        97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~  175 (313)
T 3cek_A           97 EITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQ  175 (313)
T ss_dssp             EECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC
T ss_pred             eecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecccccc
Confidence            88776 789999 66789988774210                          0     00     00            


Q ss_pred             -----eeEEEeecccccCCCCchhhcc-----------CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-Hhhhh
Q 048684          193 -----THHIVSKIEGTFGYLPPEFFMH-----------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKE  255 (363)
Q Consensus       193 -----~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~  255 (363)
                           ........+||+.|+|||++.+           ..++.++|||||||++|||++|+.||.......... .....
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  255 (313)
T 3cek_A          176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP  255 (313)
T ss_dssp             --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCT
T ss_pred             ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhc
Confidence                 0001123468999999999975           478999999999999999999999997654332221 12222


Q ss_pred             hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          256 LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ......+...+    ..+.+++.+||+.||.+|||+.+++++.
T Consensus       256 ~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          256 NHEIEFPDIPE----KDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             TSCCCCCCCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             ccccCCcccch----HHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            22222233333    3489999999999999999999999754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=3.4e-30  Score=239.21  Aligned_cols=198  Identities=19%  Similarity=0.316  Sum_probs=144.6

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..++|...+.||+|+||+||+|.. .+|+.||||.+.....   ...+.+|+.++..++||||+++++++.... .++||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            456899999999999999999986 4589999999975432   357889999999999999999999887665 89999


Q ss_pred             EccCCCChhhhhhhcc--------------------------------------CCCCceeE---------------EEe
Q 048684          172 ELSPHGSLASLLYAKW--------------------------------------LPDKWTHH---------------IVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~---------------~~~  198 (363)
                      ||+++|+|.+++....                                      +.......               ...
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN  183 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence            9999999998874110                                      00000000               012


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||.........+... ....+...  .+......+.+++.
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~li~  260 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP-TNPPPTFR--KPELWSDNFTDFVK  260 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HSCCCCCS--SGGGSCHHHHHHHH
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-cCCCcccC--CcccCCHHHHHHHH
Confidence            2358999999999999999999999999999999999999998765433332221 11111111  12223345999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      .||+.||.+|||+.+++++
T Consensus       261 ~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTTS
T ss_pred             HHccCChhhCcCHHHHHhC
Confidence            9999999999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=3.4e-30  Score=243.99  Aligned_cols=209  Identities=19%  Similarity=0.232  Sum_probs=151.4

Q ss_pred             ccCHHHHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-----CCCcceE
Q 048684           85 NFALSELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-----HPNIAKM  158 (363)
Q Consensus        85 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l  158 (363)
                      .+++.+.....++|.+.+.||+|+||+||+|.. .+|+.||||.+...  ......+..|+.++..+.     |||||++
T Consensus        24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            344444455668999999999999999999985 57899999999743  233567888999999986     9999999


Q ss_pred             EEEEEcCC-eEEEEEccCCCChhhhhhhcc---------------------------------------CCC--------
Q 048684          159 IGYGVEGG-MHLILELSPHGSLASLLYAKW---------------------------------------LPD--------  190 (363)
Q Consensus       159 ~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~--------  190 (363)
                      ++++...+ .++||||+ +|+|.+++....                                       +..        
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~  180 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI  180 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccccc
Confidence            99887766 88999999 889988774210                                       000        


Q ss_pred             -----------------CceeEE------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCC
Q 048684          191 -----------------KWTHHI------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD  241 (363)
Q Consensus       191 -----------------~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~  241 (363)
                                       .....+            ....+||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  260 (360)
T 3llt_A          181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR  260 (360)
T ss_dssp             EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             chhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence                             000000            122458999999999999999999999999999999999999998


Q ss_pred             CchhhHHHHHhhhhhcCCc-------------------------CCCCC-CH---------------HHHHHHHHHHHHc
Q 048684          242 SSQKSLVMWSSMKELVDPT-------------------------LGDAY-NT---------------EQLTRLLLIASAC  280 (363)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~-~~---------------~~~~~l~~li~~c  280 (363)
                      .......... +.....+.                         .+... ..               .....+.+|+..|
T Consensus       261 ~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  339 (360)
T 3llt_A          261 THEHMEHLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSI  339 (360)
T ss_dssp             CSSHHHHHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHH
T ss_pred             CCcHHHHHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHH
Confidence            7543322211 11111100                         00000 00               0114577999999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 048684          281 INQTSACRPQMSKVVQA  297 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~  297 (363)
                      |+.||.+|||+.+++++
T Consensus       340 L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          340 LQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             CCSSGGGSCCHHHHTTS
T ss_pred             hcCChhhCCCHHHHhcC
Confidence            99999999999999865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.96  E-value=2.7e-30  Score=257.89  Aligned_cols=201  Identities=22%  Similarity=0.306  Sum_probs=151.9

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHL  169 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~l  169 (363)
                      ..++|...++||+|+||.||+|.. .+|+.||||.+....  .......+.+|+.+|..++|||||++++++.+.. .|+
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            346799999999999999999985 579999999986432  1122467889999999999999999999887766 899


Q ss_pred             EEEccCCCChhhhhhhcc---------------------------------------CCCCc---------ee-----EE
Q 048684          170 ILELSPHGSLASLLYAKW---------------------------------------LPDKW---------TH-----HI  196 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~---------------------------------------~~~~~---------~~-----~~  196 (363)
                      |||||++|+|.+++....                                       +....         ..     ..
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~  341 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  341 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence            999999999988764110                                       00000         00     01


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   ......+.. ....++..++.    .+
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p~~~s~----~~  416 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYSERFSP----QA  416 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCCTTSCH----HH
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-ccccCCccCCH----HH
Confidence            23457999999999999999999999999999999999999999875321   112222222 22233333444    49


Q ss_pred             HHHHHHccccCCCCCC-----CHHHHHHHhh
Q 048684          274 LLIASACINQTSACRP-----QMSKVVQALR  299 (363)
Q Consensus       274 ~~li~~cl~~dP~~RP-----t~~evl~~L~  299 (363)
                      .+|+.+||+.||.+||     ++.+|+++-.
T Consensus       417 ~dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf  447 (576)
T 2acx_A          417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPL  447 (576)
T ss_dssp             HHHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred             HHHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence            9999999999999999     7899987644

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=2.7e-30  Score=241.07  Aligned_cols=204  Identities=17%  Similarity=0.233  Sum_probs=146.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-------hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-------EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~  166 (363)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||.+.....       ......+.+|+.++.+++||||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            35799999999999999999985 5689999999864321       122345889999999999999999999998888


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------------cCCCCc---eeEE----------
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------------WLPDKW---THHI----------  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~---~~~~----------  196 (363)
                      .++||||+++|+|.+++...                                     .+....   ...+          
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence            99999999999998876311                                     000000   0000          


Q ss_pred             ----EeecccccCCCCchhhc---cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC---cCCCCCC
Q 048684          197 ----VSKIEGTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP---TLGDAYN  266 (363)
Q Consensus       197 ----~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~  266 (363)
                          ....+||+.|+|||++.   ...++.++|||||||++|+|++|..||............+......   ...... 
T Consensus       169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  247 (322)
T 2ycf_A          169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV-  247 (322)
T ss_dssp             CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTS-
T ss_pred             cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhc-
Confidence                01235899999999974   4678999999999999999999999997654322222222211111   111122 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          267 TEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       267 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                         ...+.+++.+||+.||.+|||+.+++++-....
T Consensus       248 ---~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          248 ---SEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             ---CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             ---CHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence               345899999999999999999999998655443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=9.3e-30  Score=242.50  Aligned_cols=203  Identities=18%  Similarity=0.190  Sum_probs=144.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.+++.++||||+++++++...       
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36899999999999999999985 568999999997543 334467789999999999999999999988654       


Q ss_pred             CeEEEEEccCCCChhhhhhh-----------------------cc------------CCCCce--------------eEE
Q 048684          166 GMHLILELSPHGSLASLLYA-----------------------KW------------LPDKWT--------------HHI  196 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~-----------------------~~------------~~~~~~--------------~~~  196 (363)
                      ..++|||||.+ +|.+++..                       ..            +.....              ...
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  182 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  182 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred             ceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc
Confidence            36899999985 67665420                       00            000000              011


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------------------
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------------------  258 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------------------  258 (363)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+........+.....                  
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  262 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  262 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHh
Confidence            23457999999999999999999999999999999999999999876543322222111100                  


Q ss_pred             --CcCCC----------------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          259 --PTLGD----------------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       259 --~~~~~----------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                        +....                .........+.+|+.+||+.||.+|||+.+++++-
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          263 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             SSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             hCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence              00000                00112356799999999999999999999999854

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=8.2e-30  Score=233.71  Aligned_cols=198  Identities=21%  Similarity=0.289  Sum_probs=138.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHH-HHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTD-YLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~-~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|+..+.||+|+||+||+|.. .+|+.||||.+........... +..+...++.++||||+++++++.+.+ .++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46799999999999999999985 6799999999976543333334 445555578889999999999887765 89999


Q ss_pred             EccCCCChhhhhh-----------------------------hc--cCCCC-----------cee--------------E
Q 048684          172 ELSPHGSLASLLY-----------------------------AK--WLPDK-----------WTH--------------H  195 (363)
Q Consensus       172 E~~~~gsL~~~l~-----------------------------~~--~~~~~-----------~~~--------------~  195 (363)
                      ||+++ +|.+++.                             ..  ....+           ...              .
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence            99984 7766542                             11  00000           000              0


Q ss_pred             EEeecccccCCCCchhh----ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC-CCCCCHHHH
Q 048684          196 IVSKIEGTFGYLPPEFF----MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL-GDAYNTEQL  270 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  270 (363)
                      ......||+.|+|||++    .+..++.++|||||||++|||+||+.||..................+.. ...++.   
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  241 (290)
T 3fme_A          165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA---  241 (290)
T ss_dssp             -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCH---
T ss_pred             cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCH---
Confidence            01123699999999996    5567899999999999999999999999864333332222222222222 223444   


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                       .+.+++..||+.||.+|||+.+++++
T Consensus       242 -~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          242 -EFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             -HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             -HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence             48999999999999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=4.7e-30  Score=251.64  Aligned_cols=204  Identities=18%  Similarity=0.171  Sum_probs=146.3

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      .++|+..+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+++.++|||||++++++....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            47899999999999999999984 568999999997542 3344678899999999999999999999886542      


Q ss_pred             -eEEEEEccCCCChhhhhh-----------------------hcc------------CCCCcee--------------EE
Q 048684          167 -MHLILELSPHGSLASLLY-----------------------AKW------------LPDKWTH--------------HI  196 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~-----------------------~~~------------~~~~~~~--------------~~  196 (363)
                       .|+|||||.++ |.+.+.                       ...            +......              ..
T Consensus       141 ~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  219 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  219 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCC
T ss_pred             eEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc
Confidence             59999999875 443331                       100            0000000              01


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----------------
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----------------  259 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----------------  259 (363)
                      ....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+........+.....|                 
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~  299 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  299 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHT
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhh
Confidence            234579999999999999999999999999999999999999998765433222221111100                 


Q ss_pred             ---cCCCC----------------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 ---TLGDA----------------YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 ---~~~~~----------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         .....                ........+.+|+.+||+.||.+|||+.|++++-.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  358 (464)
T ss_dssp             TSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             cccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence               00000                00112567899999999999999999999998643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=1.4e-30  Score=245.80  Aligned_cols=204  Identities=18%  Similarity=0.236  Sum_probs=148.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------Ce
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------GM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~  167 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.++.+++||||+++++++...      ..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46899999999999999999995 468999999997655555567889999999999999999999987653      37


Q ss_pred             EEEEEccCCCChhhhhhhccC------------------------------------CCC---------ceeE-------
Q 048684          168 HLILELSPHGSLASLLYAKWL------------------------------------PDK---------WTHH-------  195 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~---------~~~~-------  195 (363)
                      ++||||+. |+|.+++....+                                    ...         ....       
T Consensus        90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  168 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD  168 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence            99999998 588776531100                                    000         0000       


Q ss_pred             ---------EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-----
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-----  260 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-----  260 (363)
                               .....+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+................+.     
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  248 (353)
T 2b9h_A          169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL  248 (353)
T ss_dssp             -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTT
T ss_pred             ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccc
Confidence                     0122468999999998865 6799999999999999999999999987654332222111100000     


Q ss_pred             -----------------CCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          261 -----------------LGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       261 -----------------~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                       ....    ........+.+++.+||+.||.+|||+.+++++-.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  308 (353)
T 2b9h_A          249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY  308 (353)
T ss_dssp             TTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence                             0000    00123345889999999999999999999998543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=2.8e-30  Score=248.65  Aligned_cols=196  Identities=13%  Similarity=0.145  Sum_probs=137.5

Q ss_pred             CCCccC-CcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHh-CCCCCcceEEEEEEc-----CCe
Q 048684           96 DNFSHE-NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH-VDHPNIAKMIGYGVE-----GGM  167 (363)
Q Consensus        96 ~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~-----~~~  167 (363)
                      ++|... ++||+|+||+||+|.. .+|+.||||.+...      ..+.+|+.++.+ .+|||||++++++..     ..+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            456665 6899999999999985 56899999999632      356788888754 589999999997753     237


Q ss_pred             EEEEEccCCCChhhhhhhcc---------------------------------------CCC---Ccee-----------
Q 048684          168 HLILELSPHGSLASLLYAKW---------------------------------------LPD---KWTH-----------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~---~~~~-----------  194 (363)
                      |+|||||++|+|.+++....                                       +..   ....           
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence            89999999999988874210                                       000   0000           


Q ss_pred             ---EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH----HHHHhhhhhcCCcCCCCCCH
Q 048684          195 ---HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL----VMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       195 ---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  267 (363)
                         ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....    ...........  ++.....
T Consensus       215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~  292 (400)
T 1nxk_A          215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE--FPNPEWS  292 (400)
T ss_dssp             C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC--CCTTTTT
T ss_pred             CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc--CCCcccc
Confidence               11234568999999999999999999999999999999999999997654221    11111111111  1111112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..+..+.+|+..||+.||.+|||+.+++++.+
T Consensus       293 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~  324 (400)
T 1nxk_A          293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW  324 (400)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            23345999999999999999999999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=232.52  Aligned_cols=197  Identities=17%  Similarity=0.208  Sum_probs=144.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---CCe
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGM  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~  167 (363)
                      .++|.+.+.||+|+||.||++.. .+|+.||||.+....   .......+.+|+.++..++||||+++++++..   ...
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            36899999999999999999985 568999999986432   12235789999999999999999999998743   237


Q ss_pred             EEEEEccCCCChhhhhhhc---------------------------------------cCCCCc----------------
Q 048684          168 HLILELSPHGSLASLLYAK---------------------------------------WLPDKW----------------  192 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~---------------------------------------~~~~~~----------------  192 (363)
                      ++||||+.+| |.+++...                                       .+....                
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~  162 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF  162 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence            9999999976 54444210                                       000000                


Q ss_pred             -eeEEEeecccccCCCCchhhccCC--CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          193 -THHIVSKIEGTFGYLPPEFFMHGI--ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       193 -~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                       .........||+.|+|||++.+..  ++.++|||||||++|||++|+.||.+.............  ...++..++.. 
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~-  239 (305)
T 2wtk_C          163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGDCGPP-  239 (305)
T ss_dssp             CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCCSSSCHH-
T ss_pred             ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CCCCCCccCHH-
Confidence             001122345899999999997644  488999999999999999999999876544332222222  12233334444 


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                         +.+++.+||+.||.+|||+.+++++-
T Consensus       240 ---l~~li~~~l~~dp~~Rps~~~ll~~~  265 (305)
T 2wtk_C          240 ---LSDLLKGMLEYEPAKRFSIRQIRQHS  265 (305)
T ss_dssp             ---HHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred             ---HHHHHHHHccCChhhCCCHHHHhcCc
Confidence               88999999999999999999999753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=5.5e-30  Score=242.76  Aligned_cols=212  Identities=19%  Similarity=0.222  Sum_probs=150.1

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc----------hhHHHHHHHHHHHHHhCCCCCcc
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP----------EEMTTDYLSELGIIVHVDHPNIA  156 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv  156 (363)
                      .+.++....++|...+.||+|+||.||+|...+|..||||.+.....          ....+.+.+|+.++.+++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            35678888999999999999999999999987799999999853221          12347899999999999999999


Q ss_pred             eEEEEEEcC------CeEEEEEccCCCChhhhhhhcc--------------------------------------CCCCc
Q 048684          157 KMIGYGVEG------GMHLILELSPHGSLASLLYAKW--------------------------------------LPDKW  192 (363)
Q Consensus       157 ~l~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~  192 (363)
                      ++++++...      ..++||||+. |+|.+++....                                      +....
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  171 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN  171 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC
Confidence            999987532      2689999998 57776653110                                      00000


Q ss_pred             e--------------eEEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc
Q 048684          193 T--------------HHIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV  257 (363)
Q Consensus       193 ~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~  257 (363)
                      .              .......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+...............
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  251 (362)
T 3pg1_A          172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG  251 (362)
T ss_dssp             CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence            0              001123468999999999977 6799999999999999999999999987654332222211111


Q ss_pred             CC-------------------c---CCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          258 DP-------------------T---LGDA----YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       258 ~~-------------------~---~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+                   .   ....    ........+.+|+.+||+.||.+|||+.+++++-.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence            00                   0   0000    01112345899999999999999999999997643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=9.5e-30  Score=234.35  Aligned_cols=203  Identities=19%  Similarity=0.245  Sum_probs=151.2

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--------hhHHHHHHHHHHHHHhCC-CCCcceEEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--------EEMTTDYLSELGIIVHVD-HPNIAKMIGYGV  163 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~  163 (363)
                      ..++|...+.||+|+||.||+|.. .+|+.||||.+.....        ....+.+.+|+.++.++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            347899999999999999999996 5689999999975431        123467889999999995 999999999988


Q ss_pred             cCC-eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE----------
Q 048684          164 EGG-MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH----------  195 (363)
Q Consensus       164 ~~~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~----------  195 (363)
                      ... .++||||+++|+|.+++....                                     +.......          
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence            766 889999999999998875210                                     00000000          


Q ss_pred             ----EEeecccccCCCCchhhc------cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCC
Q 048684          196 ----IVSKIEGTFGYLPPEFFM------HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAY  265 (363)
Q Consensus       196 ----~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (363)
                          ......||+.|+|||++.      ...++.++|||||||++|+|++|+.||....................  ...
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~  252 (298)
T 1phk_A          175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG--SPE  252 (298)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--TTT
T ss_pred             CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC--ccc
Confidence                112346899999999985      45689999999999999999999999987654443333333222211  111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          266 NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       266 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ....+..+.+++.+||+.||.+|||+.+++++-
T Consensus       253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  285 (298)
T 1phk_A          253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP  285 (298)
T ss_dssp             GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence            123344599999999999999999999999743

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=3.7e-30  Score=256.00  Aligned_cols=199  Identities=20%  Similarity=0.264  Sum_probs=148.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      .++|...++||+|+||.||+|+. .+|+.||||.+.....  ......+.+|+.++.+++|||||++++++.... .|+|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            36799999999999999999996 5699999999964321  123467889999999999999999999887766 8999


Q ss_pred             EEccCCCChhhhhhhcc-----------------------------------------CCCCc---------ee------
Q 048684          171 LELSPHGSLASLLYAKW-----------------------------------------LPDKW---------TH------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-----------------------------------------~~~~~---------~~------  194 (363)
                      ||||++|+|.+++....                                         +....         ..      
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~  343 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ  343 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence            99999999987764210                                         00000         00      


Q ss_pred             EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                      ......+||+.|+|||++.+..|+.++|||||||++|||+||++||.+....   ......+... ...++..++.    
T Consensus       344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~----  418 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ-AVTYPDKFSP----  418 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC-CCCCCTTSCH----
T ss_pred             cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc-ccCCCcccCH----
Confidence            0112347999999999999999999999999999999999999999865321   1111222111 1222333444    


Q ss_pred             HHHHHHHHccccCCCCCCCH-----HHHHHHh
Q 048684          272 RLLLIASACINQTSACRPQM-----SKVVQAL  298 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~-----~evl~~L  298 (363)
                      .+.+|+.+||+.||.+||++     .+++++-
T Consensus       419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hp  450 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP  450 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred             HHHHHHHHhccCCHhHCCCCcccCHHHHHcCc
Confidence            49999999999999999975     6777643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=4.4e-30  Score=240.12  Aligned_cols=202  Identities=21%  Similarity=0.331  Sum_probs=127.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHH-HHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELG-IIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||.||+|.. .+|+.||||.+...........+..|+. +++.++||||+++++++...+ .++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            36899999999999999999996 5799999999986655544566777776 677789999999999888766 78999


Q ss_pred             EccCCCChhhhhh------------------------------h--ccCCC-----------CceeE-------------
Q 048684          172 ELSPHGSLASLLY------------------------------A--KWLPD-----------KWTHH-------------  195 (363)
Q Consensus       172 E~~~~gsL~~~l~------------------------------~--~~~~~-----------~~~~~-------------  195 (363)
                      ||+.+ +|.+++.                              .  .....           .....             
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            99985 6655442                              1  10000           00000             


Q ss_pred             -EEeecccccCCCCchhh----ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHH
Q 048684          196 -IVSKIEGTFGYLPPEFF----MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQL  270 (363)
Q Consensus       196 -~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (363)
                       ......||+.|+|||++    .+..++.++|||||||++|||++|+.||..................+.+.........
T Consensus       180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS  259 (327)
T ss_dssp             --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCC
T ss_pred             cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCC
Confidence             01123689999999999    4567899999999999999999999999864332211111111112222221112233


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+.+++..||+.||.+|||+.+++++
T Consensus       260 ~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          260 PSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            459999999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.2e-30  Score=242.64  Aligned_cols=204  Identities=24%  Similarity=0.373  Sum_probs=145.7

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC--CCCCcceEEEEEEcC-----
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV--DHPNIAKMIGYGVEG-----  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~-----  165 (363)
                      ...++|.+.+.||+|+||.||+|... |+.||||.+....    ...+..|.+++..+  +||||+++++++...     
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            34568999999999999999999885 8999999986432    34556666666654  899999999988765     


Q ss_pred             CeEEEEEccCCCChhhhhhhccCC-------------------C---------CceeE----------------E-----
Q 048684          166 GMHLILELSPHGSLASLLYAKWLP-------------------D---------KWTHH----------------I-----  196 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~~~-------------------~---------~~~~~----------------~-----  196 (363)
                      ..++|||||++|+|.+++....++                   .         ...|.                +     
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~  188 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  188 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence            378999999999999887421100                   0         00000                0     


Q ss_pred             --------------EeecccccCCCCchhhccCCCCcc------ceEEechhHHHHHHhC----------CCCCCCchhh
Q 048684          197 --------------VSKIEGTFGYLPPEFFMHGIADEK------TDVYAYGVLLLEIITG----------RQALDSSQKS  246 (363)
Q Consensus       197 --------------~~~~~gt~~y~aPE~~~~~~~~~~------sDvwS~Gvvl~elltG----------~~P~~~~~~~  246 (363)
                                    ....+||+.|+|||++.+..++..      +|||||||++|||+||          ..||......
T Consensus       189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~  268 (337)
T 3mdy_A          189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS  268 (337)
T ss_dssp             CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence                          012368999999999988776665      9999999999999999          6676543211


Q ss_pred             H-----HHHHhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          247 L-----VMWSSMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       247 ~-----~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .     ...........+.++..+ .......+.+++.+||+.||.+|||+.+|+++|+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence            1     111111122222222211 225677899999999999999999999999998643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.96  E-value=3.1e-30  Score=242.23  Aligned_cols=205  Identities=20%  Similarity=0.310  Sum_probs=150.8

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHh--CCCCCcceEEEEEEcC----
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH--VDHPNIAKMIGYGVEG----  165 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----  165 (363)
                      ....++|.+.+.||+|+||+||+|.. +|+.||||.+...    ....+.+|++++..  ++||||+++++++...    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            44457899999999999999999998 4899999998642    24678889999987  7899999999988765    


Q ss_pred             -CeEEEEEccCCCChhhhhhhccC-------------------C---------CCcee----------------E-----
Q 048684          166 -GMHLILELSPHGSLASLLYAKWL-------------------P---------DKWTH----------------H-----  195 (363)
Q Consensus       166 -~~~lv~E~~~~gsL~~~l~~~~~-------------------~---------~~~~~----------------~-----  195 (363)
                       ..++||||+++|+|.+++....+                   .         ....|                .     
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg  192 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  192 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence             47899999999999988742110                   0         00000                0     


Q ss_pred             --------------EEeecccccCCCCchhhccC------CCCccceEEechhHHHHHHhC----------CCCCCCchh
Q 048684          196 --------------IVSKIEGTFGYLPPEFFMHG------IADEKTDVYAYGVLLLEIITG----------RQALDSSQK  245 (363)
Q Consensus       196 --------------~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG----------~~P~~~~~~  245 (363)
                                    ......||+.|+|||++.+.      .++.++|||||||++|||+||          ..||.....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~  272 (342)
T 1b6c_B          193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  272 (342)
T ss_dssp             TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence                          01223589999999999766      344799999999999999999          778865421


Q ss_pred             -----hHHHHHhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          246 -----SLVMWSSMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       246 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                           .............+.++..+ .......+.+|+.+||+.||.+|||+.+|+++|+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          273 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence                 11111122233333333221 235667899999999999999999999999998643

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=3e-30  Score=235.74  Aligned_cols=192  Identities=21%  Similarity=0.369  Sum_probs=146.5

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---------  164 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------  164 (363)
                      .++|...+.||+|+||.||+|... +|+.||||.+....     ..+.+|+.++.+++||||+++++++..         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            357899999999999999999964 79999999997543     356789999999999999999997653         


Q ss_pred             --------CCeEEEEEccCCCChhhhhhhcc---CCC------------------------------C------ceeE--
Q 048684          165 --------GGMHLILELSPHGSLASLLYAKW---LPD------------------------------K------WTHH--  195 (363)
Q Consensus       165 --------~~~~lv~E~~~~gsL~~~l~~~~---~~~------------------------------~------~~~~--  195 (363)
                              ...++||||+++|+|.+++....   ++.                              .      ....  
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence                    22689999999999999884210   000                              0      0000  


Q ss_pred             ------------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCC
Q 048684          196 ------------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGD  263 (363)
Q Consensus       196 ------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                                  ......||+.|+|||++.+..++.++|||||||++|||++|..|+.....   .+..+   ....+..
T Consensus       165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~---~~~~~~~  238 (284)
T 2a19_B          165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK---FFTDL---RDGIISD  238 (284)
T ss_dssp             CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH---HHHHH---HTTCCCT
T ss_pred             cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH---HHHHh---hcccccc
Confidence                        01123589999999999999999999999999999999999998753221   11111   1222333


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          264 AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .++..    +.+++..||+.||.+|||+.+++++|+..
T Consensus       239 ~~~~~----~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          239 IFDKK----EKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             TSCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCHH----HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            44544    88999999999999999999999998654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=5.1e-30  Score=241.47  Aligned_cols=203  Identities=16%  Similarity=0.251  Sum_probs=149.2

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCch----------------hHHHHHHHHHHHHHhCCCCCcceE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE----------------EMTTDYLSELGIIVHVDHPNIAKM  158 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~----------------~~~~~~~~E~~~l~~l~H~niv~l  158 (363)
                      .++|...+.||+|+||.||+|.. +|+.||||.+......                .....|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999999 8999999998632111                112789999999999999999999


Q ss_pred             EEEEEcCC-eEEEEEccCCCChhhh------hhhc---c-------------------CC--CCcee-------------
Q 048684          159 IGYGVEGG-MHLILELSPHGSLASL------LYAK---W-------------------LP--DKWTH-------------  194 (363)
Q Consensus       159 ~~~~~~~~-~~lv~E~~~~gsL~~~------l~~~---~-------------------~~--~~~~~-------------  194 (363)
                      ++++.+.+ .++||||+++|+|.++      +...   .                   +.  ....|             
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~  188 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN  188 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence            99988766 8999999999999988      4310   0                   00  00000             


Q ss_pred             ----------------EEEeecccccCCCCchhhccC-CCCc-cceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh
Q 048684          195 ----------------HIVSKIEGTFGYLPPEFFMHG-IADE-KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL  256 (363)
Q Consensus       195 ----------------~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~  256 (363)
                                      .......||+.|+|||++.+. .++. ++|||||||++|||++|..||............+...
T Consensus       189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~  268 (348)
T 2pml_X          189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK  268 (348)
T ss_dssp             SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred             CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence                            011234689999999999877 6766 9999999999999999999998765422222222211


Q ss_pred             cCCcCCCC---------------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          257 VDPTLGDA---------------YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       257 ~~~~~~~~---------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      . ...+..               ........+.+++.+||+.||.+|||+.+++++-.
T Consensus       269 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          269 N-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             C-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             C-cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            1 111100               00223445999999999999999999999998543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=2.6e-30  Score=243.02  Aligned_cols=193  Identities=18%  Similarity=0.306  Sum_probs=146.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-------hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-------EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~  166 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.....       ......+.+|+.++.+++|||||++++++.+..
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46799999999999999999984 6789999999975431       112346778999999999999999999988776


Q ss_pred             -eEEEEEccCCC-Chhhhhhhcc-------------------------------------CCCCcee-------------
Q 048684          167 -MHLILELSPHG-SLASLLYAKW-------------------------------------LPDKWTH-------------  194 (363)
Q Consensus       167 -~~lv~E~~~~g-sL~~~l~~~~-------------------------------------~~~~~~~-------------  194 (363)
                       .++||||+.+| +|.+++....                                     +......             
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence             78999999877 8887764110                                     0000000             


Q ss_pred             -EEEeecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          195 -HIVSKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                       ......+||+.|+|||++.+..+ +.++|||||||++|||++|+.||......      .....  ..+...+.    .
T Consensus       183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~--~~~~~~~~----~  250 (335)
T 3dls_A          183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEAAI--HPPYLVSK----E  250 (335)
T ss_dssp             TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTTCC--CCSSCCCH----H
T ss_pred             CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhhcc--CCCcccCH----H
Confidence             01123469999999999988876 89999999999999999999999764321      11111  11222344    4


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +.+|+..||+.||.+|||+.+++++-+
T Consensus       251 l~~li~~~L~~dP~~Rps~~ell~hp~  277 (335)
T 3dls_A          251 LMSLVSGLLQPVPERRTTLEKLVTDPW  277 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCcc
Confidence            999999999999999999999998644

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=1.8e-29  Score=232.04  Aligned_cols=198  Identities=18%  Similarity=0.176  Sum_probs=145.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV-EGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~-~~lv~  171 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+......   ..+.+|+.++..++|++++..++++. ... .++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            47899999999999999999995 67999999998754432   36889999999999988887777553 344 78999


Q ss_pred             EccCCCChhhhhhhc--------------------------------------cCC---CCceeEE--------------
Q 048684          172 ELSPHGSLASLLYAK--------------------------------------WLP---DKWTHHI--------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--------------------------------------~~~---~~~~~~~--------------  196 (363)
                      ||+ +|+|.+++...                                      .+.   ......+              
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence            999 89998887410                                      000   0000000              


Q ss_pred             --------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh---hHHHHHhhhhhcC---CcCC
Q 048684          197 --------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK---SLVMWSSMKELVD---PTLG  262 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~---~~~~~~~~~~~~~---~~~~  262 (363)
                              .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....   .............   +.+.
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  243 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence                    1234689999999999999999999999999999999999999986321   1111111111111   1111


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ..++.    .+.+++..||+.||.+|||+.+|++.|+.
T Consensus       244 ~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          244 KGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             TTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             hhCCH----HHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence            22344    49999999999999999999999998854

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=4.2e-30  Score=245.84  Aligned_cols=202  Identities=17%  Similarity=0.229  Sum_probs=141.2

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-----  165 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----  165 (363)
                      ....++|...+.||+|+||+||+|.. .+|+.||||++.....     ...+|+.+++.++|||||++++++...     
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            44567899999999999999999985 6799999999875432     223799999999999999999987432     


Q ss_pred             ---------------------------------C-eEEEEEccCCCChhhhhhhc-------------------------
Q 048684          166 ---------------------------------G-MHLILELSPHGSLASLLYAK-------------------------  186 (363)
Q Consensus       166 ---------------------------------~-~~lv~E~~~~gsL~~~l~~~-------------------------  186 (363)
                                                       . .++|||||++ +|.+.+...                         
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                             1 6799999994 766655310                         


Q ss_pred             ----------------cC-CCCceeEE--------------EeecccccCCCCchhhccC-CCCccceEEechhHHHHHH
Q 048684          187 ----------------WL-PDKWTHHI--------------VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEII  234 (363)
Q Consensus       187 ----------------~~-~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~ell  234 (363)
                                      .+ .......+              .....||+.|+|||++.+. .++.++|||||||++|||+
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence                            00 00000000              1123589999999998775 4999999999999999999


Q ss_pred             hCCCCCCCchhhHHHHHhhhhhcCC------------------cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCH
Q 048684          235 TGRQALDSSQKSLVMWSSMKELVDP------------------TLGDA-----YNTEQLTRLLLIASACINQTSACRPQM  291 (363)
Q Consensus       235 tG~~P~~~~~~~~~~~~~~~~~~~~------------------~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~  291 (363)
                      +|++||.+..........+.....|                  .....     .+...+..+.+|+.+||+.||.+|||+
T Consensus       237 ~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  316 (383)
T 3eb0_A          237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP  316 (383)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9999998765444333322211110                  00000     111233458999999999999999999


Q ss_pred             HHHHHHhh
Q 048684          292 SKVVQALR  299 (363)
Q Consensus       292 ~evl~~L~  299 (363)
                      .+++++-.
T Consensus       317 ~e~l~hp~  324 (383)
T 3eb0_A          317 YEAMAHPF  324 (383)
T ss_dssp             HHHHTSGG
T ss_pred             HHHhcCHH
Confidence            99997543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=2.7e-29  Score=239.31  Aligned_cols=204  Identities=15%  Similarity=0.215  Sum_probs=147.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-e----
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-M----  167 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~----  167 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..++||||+++++++.... .    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46899999999999999999985 569999999997543 3344678899999999999999999999987654 2    


Q ss_pred             --EEEEEccCCCChhhhhhh-----------------------cc------------CCCCc------------eeEEEe
Q 048684          168 --HLILELSPHGSLASLLYA-----------------------KW------------LPDKW------------THHIVS  198 (363)
Q Consensus       168 --~lv~E~~~~gsL~~~l~~-----------------------~~------------~~~~~------------~~~~~~  198 (363)
                        ++||||+. |+|.+++..                       ..            +....            ......
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~  199 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  199 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred             eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcC
Confidence              89999998 577665431                       00            00000            011123


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh---------------------
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL---------------------  256 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~---------------------  256 (363)
                      ..+||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.+..............                     
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  279 (371)
T ss_dssp             CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHH
T ss_pred             CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhh
Confidence            4568999999999987 679999999999999999999999998765433322221110                     


Q ss_pred             -cCCcCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          257 -VDPTLGDAY---NTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       257 -~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                       ........+   .......+.+|+.+||+.||.+|||+.+++++-.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  326 (371)
T 4exu_A          280 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  326 (371)
T ss_dssp             HSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             ccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence             000000000   0112455999999999999999999999998644

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=3.1e-30  Score=245.61  Aligned_cols=204  Identities=16%  Similarity=0.234  Sum_probs=139.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------  165 (363)
                      .++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++...       
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46899999999999999999984 679999999997543 334467889999999999999999999988643       


Q ss_pred             CeEEEEEccCCCChhhhhhhccC------------------------------------CCCce------------eEEE
Q 048684          166 GMHLILELSPHGSLASLLYAKWL------------------------------------PDKWT------------HHIV  197 (363)
Q Consensus       166 ~~~lv~E~~~~gsL~~~l~~~~~------------------------------------~~~~~------------~~~~  197 (363)
                      ..++|+||+ +++|.+++....+                                    .....            ....
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~  186 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM  186 (367)
T ss_dssp             CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred             eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccC
Confidence            378999999 6788776641100                                    00000            0112


Q ss_pred             eecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC-----------------
Q 048684          198 SKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP-----------------  259 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~-----------------  259 (363)
                      ...+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..............|                 
T Consensus       187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  266 (367)
T 2fst_X          187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI  266 (367)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHH
T ss_pred             CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHH
Confidence            33569999999999987 679999999999999999999999998765433222221111000                 


Q ss_pred             ----cCCC-CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 ----TLGD-AY---NTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 ----~~~~-~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                          ..+. .+   .......+.+|+.+||+.||.+|||+.+++++-.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~  314 (367)
T 2fst_X          267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  314 (367)
T ss_dssp             HTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence                0000 00   0012345899999999999999999999998644

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=2.1e-29  Score=244.74  Aligned_cols=204  Identities=18%  Similarity=0.195  Sum_probs=147.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC-
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV------DHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~-  166 (363)
                      ..+|.+.++||+|+||+||+|.. .+|+.||||.+...  ......+.+|+.++..+      +|+||+++++++.... 
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            46799999999999999999985 56899999999753  23356788898888877      5789999999887665 


Q ss_pred             eEEEEEccCCCChhhhhhhcc---------------------------------------CCCCce--eE----------
Q 048684          167 MHLILELSPHGSLASLLYAKW---------------------------------------LPDKWT--HH----------  195 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~--~~----------  195 (363)
                      .++||||+. |+|.+++....                                       +.....  ..          
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            889999997 58877764211                                       000000  00          


Q ss_pred             --EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh-----------------
Q 048684          196 --IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL-----------------  256 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~-----------------  256 (363)
                        .....+||+.|+|||++.+..++.++|||||||++|||+||++||.+..........+...                 
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~  332 (429)
T 3kvw_A          253 HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF  332 (429)
T ss_dssp             TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHH
T ss_pred             CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhc
Confidence              1123468999999999999999999999999999999999999998765443322221110                 


Q ss_pred             cCCcC------------------------------CCCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          257 VDPTL------------------------------GDAY------NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       257 ~~~~~------------------------------~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ++...                              +...      .......+.+|+.+||+.||.+|||+.|++++-+.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~  412 (429)
T 3kvw_A          333 VSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL  412 (429)
T ss_dssp             BCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred             cCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhh
Confidence            00000                              0000      00013458899999999999999999999987554


Q ss_pred             C
Q 048684          301 D  301 (363)
Q Consensus       301 ~  301 (363)
                      .
T Consensus       413 ~  413 (429)
T 3kvw_A          413 R  413 (429)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=1.8e-29  Score=231.60  Aligned_cols=198  Identities=20%  Similarity=0.281  Sum_probs=148.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++.+++||||+++++++.+.. .++||
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            46799999999999999999996 468999999986432 2233578999999999999999999999888766 88999


Q ss_pred             EccCCCChhhhhhhc-------------------------c------------CCC---CceeEE--------------E
Q 048684          172 ELSPHGSLASLLYAK-------------------------W------------LPD---KWTHHI--------------V  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------~------------~~~---~~~~~~--------------~  197 (363)
                      ||+++++|.+++...                         .            +..   .....+              .
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence            999999998776310                         0            000   000000              0


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC--CCCCHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG--DAYNTEQLTRLLL  275 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~  275 (363)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+...................+  ...+    ..+.+
T Consensus       181 ~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  255 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS----DDAKD  255 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSC----HHHHH
T ss_pred             ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcC----HHHHH
Confidence            12247889999999865 58999999999999999999999998765544333322222221111  2233    44899


Q ss_pred             HHHHccccCCCCCCCHHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ++.+||+.||.+|||+.+++++
T Consensus       256 li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          256 LIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHcccChhhCcCHHHHhcC
Confidence            9999999999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=6.3e-30  Score=237.42  Aligned_cols=201  Identities=17%  Similarity=0.198  Sum_probs=140.0

Q ss_pred             cCCCccCCcccccCceEEEEEEEc-CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---------  164 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------  164 (363)
                      .++|...+.||+|+||+||+|... +|+.||||.+.... ....+.+.+|+.++.+++||||+++++++..         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            368999999999999999999964 58999999987654 3346789999999999999999999998742         


Q ss_pred             ------CCeEEEEEccCCCChhhhhhhcc------------------------------------C-CCCceeE------
Q 048684          165 ------GGMHLILELSPHGSLASLLYAKW------------------------------------L-PDKWTHH------  195 (363)
Q Consensus       165 ------~~~~lv~E~~~~gsL~~~l~~~~------------------------------------~-~~~~~~~------  195 (363)
                            ...++||||+. |+|.+++....                                    + .......      
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence                  23789999998 58887764110                                    0 0000000      


Q ss_pred             ------------EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc-----
Q 048684          196 ------------IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV-----  257 (363)
Q Consensus       196 ------------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~-----  257 (363)
                                  ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+...............     
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (320)
T 2i6l_A          168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE  247 (320)
T ss_dssp             CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHH
T ss_pred             ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchh
Confidence                        0112346889999999876 6799999999999999999999999987654332222211110     


Q ss_pred             ------------------CCcCC-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 ------------------DPTLG-DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ------------------~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                        .+... ..........+.+++.+||+.||.+|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence                              00000 00001123459999999999999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=1.5e-29  Score=238.89  Aligned_cols=203  Identities=19%  Similarity=0.257  Sum_probs=144.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--------  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------  165 (363)
                      ++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5799999999999999999996 679999999986443 223345788999999999999999999987653        


Q ss_pred             -CeEEEEEccCCCChhhhhhhc--------------------------------------cCCCCcee------------
Q 048684          166 -GMHLILELSPHGSLASLLYAK--------------------------------------WLPDKWTH------------  194 (363)
Q Consensus       166 -~~~lv~E~~~~gsL~~~l~~~--------------------------------------~~~~~~~~------------  194 (363)
                       ..++|||||.+ +|.+.+...                                      .+......            
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence             27899999985 555544210                                      00000000            


Q ss_pred             -------EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhh--hhcCCcCCCC
Q 048684          195 -------HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK--ELVDPTLGDA  264 (363)
Q Consensus       195 -------~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~--~~~~~~~~~~  264 (363)
                             ......+||+.|+|||++.+ ..++.++|||||||++|||+||++||.+............  ....+.....
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  255 (351)
T 3mi9_A          176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN  255 (351)
T ss_dssp             CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence                   01123458999999999976 4589999999999999999999999987654433322211  1111111000


Q ss_pred             C-----------------C-HH------HHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          265 Y-----------------N-TE------QLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       265 ~-----------------~-~~------~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .                 . ..      ....+.+|+.+||+.||.+|||+.+++++-.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  314 (351)
T 3mi9_A          256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  314 (351)
T ss_dssp             GGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence            0                 0 00      1244889999999999999999999998644

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=6.3e-29  Score=234.86  Aligned_cols=203  Identities=15%  Similarity=0.213  Sum_probs=146.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+.... .......+.+|+.++..++||||+++++++....      
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46899999999999999999985 569999999997543 3344678899999999999999999999887653      


Q ss_pred             -eEEEEEccCCCChhhhhhhc-----------------------c------------CCCCc------------eeEEEe
Q 048684          167 -MHLILELSPHGSLASLLYAK-----------------------W------------LPDKW------------THHIVS  198 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~-----------------------~------------~~~~~------------~~~~~~  198 (363)
                       .++||||+. |+|.+++...                       .            +....            ......
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  181 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  181 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------
T ss_pred             eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCcc
Confidence             489999998 5887765310                       0            00000            001122


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh---------------------
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL---------------------  256 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~---------------------  256 (363)
                      ..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..............                     
T Consensus       182 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  261 (353)
T ss_dssp             --CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHH
T ss_pred             ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHH
Confidence            3468999999999987 678999999999999999999999998765432222211100                     


Q ss_pred             -c----CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          257 -V----DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       257 -~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                       .    .+.+. .........+.+++.+||+.||.+|||+.+++++-.
T Consensus       262 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  308 (353)
T 3coi_A          262 SLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  308 (353)
T ss_dssp             TSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             hCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence             0    00110 111223455999999999999999999999997643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=7e-30  Score=241.42  Aligned_cols=198  Identities=14%  Similarity=0.155  Sum_probs=142.6

Q ss_pred             CCCccCCcccccCceEEEEEEEc---------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcce---------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE---------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAK---------  157 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~---------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------  157 (363)
                      ++|.+.+.||+|+||+||+|...         +++.||||.+...      ..+.+|+.++.+++|||||+         
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            68999999999999999999864         3789999998753      36789999999999999998         


Q ss_pred             ------EEEEEEc--CCeEEEEEccCCCChhhhhhhc---cC------------------------------------CC
Q 048684          158 ------MIGYGVE--GGMHLILELSPHGSLASLLYAK---WL------------------------------------PD  190 (363)
Q Consensus       158 ------l~~~~~~--~~~~lv~E~~~~gsL~~~l~~~---~~------------------------------------~~  190 (363)
                            +++++..  ...++||||+ +|+|.+++...   .+                                    ..
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDP  194 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEET
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcC
Confidence                  6777765  3379999999 99999887521   00                                    00


Q ss_pred             Cc--eeEE----------------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchh-
Q 048684          191 KW--THHI----------------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQK-  245 (363)
Q Consensus       191 ~~--~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~-  245 (363)
                      ..  ...+                      .....||+.|+|||++.+..++.++|||||||++|||+||+.||..... 
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            00  0000                      0123689999999999999999999999999999999999999987532 


Q ss_pred             hHHHHHhh---hhhcCCcCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          246 SLVMWSSM---KELVDPTLGDA-YNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       246 ~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ........   .....+..... ........+.+++..||+.||.+|||+.+|++.|+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  333 (352)
T 2jii_A          275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA  333 (352)
T ss_dssp             HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence            11111111   11111111100 001122449999999999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.8e-30  Score=244.68  Aligned_cols=201  Identities=18%  Similarity=0.283  Sum_probs=146.3

Q ss_pred             CCCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-  166 (363)
                      ++|.+.+.||+|+||+||+|..    .+|+.||||++....   .......+.+|+.++..+ +||||+++++++.... 
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5799999999999999999986    368999999986432   112235677899999999 6999999999887765 


Q ss_pred             eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeEE-------------
Q 048684          167 MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHHI-------------  196 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~~-------------  196 (363)
                      .++|||||++|+|.+++....                                     +.......+             
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~  213 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  213 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC
Confidence            889999999999988874110                                     000000000             


Q ss_pred             ---EeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhH---HHHHhhhhhcCCcCCCCCCHH
Q 048684          197 ---VSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSL---VMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       197 ---~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  268 (363)
                         ....+||+.|+|||++.+  ..++.++|||||||++|||+||+.||.......   .....+.. ..+..+...+  
T Consensus       214 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--  290 (355)
T 1vzo_A          214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMS--  290 (355)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCCCTTSC--
T ss_pred             CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc-cCCCCCcccC--
Confidence               112469999999999985  357899999999999999999999997543211   11111111 1223333344  


Q ss_pred             HHHHHHHHHHHccccCCCCCC-----CHHHHHHHhhcC
Q 048684          269 QLTRLLLIASACINQTSACRP-----QMSKVVQALRGD  301 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RP-----t~~evl~~L~~~  301 (363)
                        ..+.+|+.+||+.||.+||     ++.+++++....
T Consensus       291 --~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~  326 (355)
T 1vzo_A          291 --ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ  326 (355)
T ss_dssp             --HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             --HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence              4489999999999999999     999999877654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=6.1e-30  Score=261.49  Aligned_cols=199  Identities=16%  Similarity=0.243  Sum_probs=153.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~  168 (363)
                      ..++|.+.++||+|+||.||+|.. .+|+.||||++....  .......+..|..++..+ +||||+++++++.+.+ +|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            346899999999999999999985 568999999987432  122346788999999987 6999999999887765 89


Q ss_pred             EEEEccCCCChhhhhhhc-------------------------------cCCC------Cc---------e------eEE
Q 048684          169 LILELSPHGSLASLLYAK-------------------------------WLPD------KW---------T------HHI  196 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~-------------------------------~~~~------~~---------~------~~~  196 (363)
                      |||||+++|+|.+++...                               ..+.      ..         .      ...
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~  498 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT  498 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence            999999999998887511                               0000      00         0      011


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ....+||+.|+|||++.+..|+.++|||||||+||||++|++||.+.+.............  .++...+    ..+.+|
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s----~~~~~l  572 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMS----KEAVAI  572 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC--CCCTTSC----HHHHHH
T ss_pred             cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC--CCCccCC----HHHHHH
Confidence            2346799999999999999999999999999999999999999998766555544443322  2233344    449999


Q ss_pred             HHHccccCCCCCCCH-----HHHHHHh
Q 048684          277 ASACINQTSACRPQM-----SKVVQAL  298 (363)
Q Consensus       277 i~~cl~~dP~~RPt~-----~evl~~L  298 (363)
                      +..||+.||.+||++     .+|+++-
T Consensus       573 i~~lL~~dP~~R~~~~~~~~~ei~~h~  599 (674)
T 3pfq_A          573 CKGLMTKHPGKRLGCGPEGERDIKEHA  599 (674)
T ss_dssp             HHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred             HHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence            999999999999998     7887643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=2.1e-29  Score=231.47  Aligned_cols=200  Identities=17%  Similarity=0.161  Sum_probs=142.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCC-eEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGV-EGG-MHLI  170 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~-~~lv  170 (363)
                      ..++|...+.||+|+||+||+|.. .+|+.||||.+.....   ...+.+|+.++..++|++++..++++. ... .++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            357899999999999999999985 6789999998764432   235788999999999988888777554 444 7899


Q ss_pred             EEccCCCChhhhhhhc--------------------------------------cC---CCCceeE--------------
Q 048684          171 LELSPHGSLASLLYAK--------------------------------------WL---PDKWTHH--------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~--------------------------------------~~---~~~~~~~--------------  195 (363)
                      |||+ +|+|.+++...                                      .+   .......              
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            9999 89998887410                                      00   0000000              


Q ss_pred             --------EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhhhcCC---cC
Q 048684          196 --------IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKELVDP---TL  261 (363)
Q Consensus       196 --------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~~~~~---~~  261 (363)
                              ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....   .............   ..
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL  242 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh
Confidence                    011346899999999999999999999999999999999999999764321   1111111111111   11


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ...++.    .+.+++..||+.||.+|||+.+|++.|+..
T Consensus       243 ~~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          243 CKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             TTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hccCCH----HHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            122343    499999999999999999999999988643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=3.5e-29  Score=230.45  Aligned_cols=201  Identities=18%  Similarity=0.338  Sum_probs=142.9

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---------  164 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------  164 (363)
                      .++|...+.||+|+||+||+|.. .+|+.||||.+...  ......+.+|+.++..++||||+++++++.+         
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            35789999999999999999995 57999999999642  3345789999999999999999999998754         


Q ss_pred             -----CCeEEEEEccCCCChhhhhhhcc--------------------------------------CCCCce--------
Q 048684          165 -----GGMHLILELSPHGSLASLLYAKW--------------------------------------LPDKWT--------  193 (363)
Q Consensus       165 -----~~~~lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~--------  193 (363)
                           ...++||||+++|+|.+++....                                      +.....        
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence                 22789999999999998874100                                      000000        


Q ss_pred             ---------------------eEEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHH
Q 048684          194 ---------------------HHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS  251 (363)
Q Consensus       194 ---------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~  251 (363)
                                           ........||+.|+|||++.+. .++.++|||||||++|||++   ||...........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~  239 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK  239 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence                                 0112234589999999999764 68999999999999999998   6654322222222


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+.. ....++..++......+.+++..||+.||.+|||+.+++++-+..
T Consensus       240 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          240 KLRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             HHHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             hccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence            2222 112222333344445589999999999999999999999865543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.96  E-value=3.3e-29  Score=245.15  Aligned_cols=204  Identities=16%  Similarity=0.215  Sum_probs=129.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~  166 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+|..++|||||++++++...      .
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            46899999999999999999984 578999999996543 334467899999999999999999999988532      3


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------------cCCCCc-----------------
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------------WLPDKW-----------------  192 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------------~~~~~~-----------------  192 (363)
                      +|+||||+. |+|.+++...                                     .+....                 
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  210 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE  210 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred             EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence            799999985 6887765310                                     000000                 


Q ss_pred             -------------------------eeEEEeecccccCCCCchhh-ccCCCCccceEEechhHHHHHHh-----------
Q 048684          193 -------------------------THHIVSKIEGTFGYLPPEFF-MHGIADEKTDVYAYGVLLLEIIT-----------  235 (363)
Q Consensus       193 -------------------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~ellt-----------  235 (363)
                                               ........+||+.|+|||++ ....|+.++|||||||+||||+|           
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~  290 (458)
T 3rp9_A          211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD  290 (458)
T ss_dssp             TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred             ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence                                     00123445789999999987 45679999999999999999999           


Q ss_pred             CCCCCCCchhh-------------------HHHHHhhhhhc-----------------------CCcCCC---CCCHHHH
Q 048684          236 GRQALDSSQKS-------------------LVMWSSMKELV-----------------------DPTLGD---AYNTEQL  270 (363)
Q Consensus       236 G~~P~~~~~~~-------------------~~~~~~~~~~~-----------------------~~~~~~---~~~~~~~  270 (363)
                      |+++|.+....                   ......+...+                       ......   ...+...
T Consensus       291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  370 (458)
T 3rp9_A          291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS  370 (458)
T ss_dssp             CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred             ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence            66666543210                   00000010000                       000000   0011124


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          271 TRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       271 ~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ..+.+|+.+||+.||.+|||+.|++++-.
T Consensus       371 ~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~  399 (458)
T 3rp9_A          371 ADAIHLLKRMLVFNPNKRITINECLAHPF  399 (458)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCHh
Confidence            45899999999999999999999998644

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=2.1e-29  Score=235.53  Aligned_cols=199  Identities=14%  Similarity=0.207  Sum_probs=143.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC---CeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG---GMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~---~~~lv  170 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+....    .+.+.+|+.++..++ ||||+++++++.+.   ..++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            6799999999999999999984 678999999997433    467899999999997 99999999988863   27899


Q ss_pred             EEccCCCChhhhhhh----------------------c------c------CCCCc-eeE--------------EEeecc
Q 048684          171 LELSPHGSLASLLYA----------------------K------W------LPDKW-THH--------------IVSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~----------------------~------~------~~~~~-~~~--------------~~~~~~  201 (363)
                      |||+.+++|.+++..                      .      .      +.... ...              .....+
T Consensus       112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  191 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV  191 (330)
T ss_dssp             EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCC
T ss_pred             EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccc
Confidence            999999999877631                      0      0      00000 000              012235


Q ss_pred             cccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-------------hhhh---cCCc----
Q 048684          202 GTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-------------MKEL---VDPT----  260 (363)
Q Consensus       202 gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-------------~~~~---~~~~----  260 (363)
                      ||+.|+|||++.+ ..++.++|||||||++|||++|+.||............             +...   .++.    
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (330)
T 3nsz_A          192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  271 (330)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred             ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence            8899999999987 67999999999999999999999999543221111110             0000   0000    


Q ss_pred             ------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          261 ------------LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       261 ------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                                  ............+.+|+.+||+.||.+|||+.+++++-
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp  321 (330)
T 3nsz_A          272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP  321 (330)
T ss_dssp             HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred             hhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence                        00001111345599999999999999999999999753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=1.9e-30  Score=247.76  Aligned_cols=192  Identities=10%  Similarity=0.076  Sum_probs=138.2

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCC--chhHHHHHHHHH---HHHHhCCCCCcceEE-------E
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSEL---GIIVHVDHPNIAKMI-------G  160 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~  160 (363)
                      ..++|...+.||+|+||+||+|. ..+|+.||||.+....  .....+.|.+|+   .++++++|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            34678899999999999999999 4679999999997432  233467899999   455566899999998       6


Q ss_pred             EEEcC------------------CeEEEEEccCCCChhhhhhhc-cCCC-------------------------------
Q 048684          161 YGVEG------------------GMHLILELSPHGSLASLLYAK-WLPD-------------------------------  190 (363)
Q Consensus       161 ~~~~~------------------~~~lv~E~~~~gsL~~~l~~~-~~~~-------------------------------  190 (363)
                      ++...                  ..++||||+ +|+|.+++... .++.                               
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            55544                  268999999 68998877521 0000                               


Q ss_pred             ------------Ccee------------EEEeecccccCCCCchhhccC-----------CCCccceEEechhHHHHHHh
Q 048684          191 ------------KWTH------------HIVSKIEGTFGYLPPEFFMHG-----------IADEKTDVYAYGVLLLEIIT  235 (363)
Q Consensus       191 ------------~~~~------------~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS~Gvvl~ellt  235 (363)
                                  ....            ......+| +.|+|||++.+.           .++.++|||||||++|||+|
T Consensus       230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt  308 (377)
T 3byv_A          230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC  308 (377)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence                        0000            01234467 999999999887           89999999999999999999


Q ss_pred             CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          236 GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       236 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      |+.||........    ...... . ....+.+    +.+|+.+||+.||.+|||+.+++++
T Consensus       309 g~~Pf~~~~~~~~----~~~~~~-~-~~~~~~~----~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          309 ADLPITKDAALGG----SEWIFR-S-CKNIPQP----VRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             SSCCC------CC----SGGGGS-S-CCCCCHH----HHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             CCCCCcccccccc----hhhhhh-h-ccCCCHH----HHHHHHHHcCCCchhCCCHHHHhhC
Confidence            9999976432211    111111 1 1234444    8999999999999999999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=1.3e-29  Score=236.35  Aligned_cols=203  Identities=18%  Similarity=0.297  Sum_probs=143.5

Q ss_pred             hcCCCccCCcccccCceEEEEEEE--cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhC---CCCCcceEEEEEE----
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL--EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHV---DHPNIAKMIGYGV----  163 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~----  163 (363)
                      ..++|.+.+.||+|+||+||+|..  .+|+.||||.+..... ......+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999986  4688999999864321 11123566777777666   8999999999876    


Q ss_pred             -c-CCeEEEEEccCCCChhhhhhhcc---------------------------------------CCCCceeEE------
Q 048684          164 -E-GGMHLILELSPHGSLASLLYAKW---------------------------------------LPDKWTHHI------  196 (363)
Q Consensus       164 -~-~~~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~~~~~~~------  196 (363)
                       . ...++||||+. |+|.+++....                                       +.......+      
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence             2 22789999998 58888764210                                       000000000      


Q ss_pred             --------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc---C----
Q 048684          197 --------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT---L----  261 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~---~----  261 (363)
                              .....||+.|+|||++.+..++.++|||||||++|||+||+.||.+..........+.....+.   .    
T Consensus       168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (326)
T 1blx_A          168 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  247 (326)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             ccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcccc
Confidence                    1124589999999999999999999999999999999999999987654433322222111000   0    


Q ss_pred             --------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          262 --------------GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       262 --------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                    ...........+.+|+.+||+.||.+|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                          000111233458899999999999999999999964

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=2.8e-29  Score=235.25  Aligned_cols=202  Identities=26%  Similarity=0.363  Sum_probs=140.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHH--HhCCCCCcceEEEEEEc----C--C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGII--VHVDHPNIAKMIGYGVE----G--G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l--~~l~H~niv~l~~~~~~----~--~  166 (363)
                      .++|...+.||+|+||+||+|.. +|+.||||++....    ...+..|.+++  ..++||||+++++++..    +  .
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            36899999999999999999987 58999999996432    34455555554  45899999999985532    1  2


Q ss_pred             eEEEEEccCCCChhhhhhhccC-------------------CC----------Ccee----------------E------
Q 048684          167 MHLILELSPHGSLASLLYAKWL-------------------PD----------KWTH----------------H------  195 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~-------------------~~----------~~~~----------------~------  195 (363)
                      .++|||||++|+|.+++.....                   ..          ...|                .      
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence            6899999999999988741100                   00          0000                0      


Q ss_pred             -----------------EEeecccccCCCCchhhcc-------CCCCccceEEechhHHHHHHhCCCCCCCchhh-----
Q 048684          196 -----------------IVSKIEGTFGYLPPEFFMH-------GIADEKTDVYAYGVLLLEIITGRQALDSSQKS-----  246 (363)
Q Consensus       196 -----------------~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~-----  246 (363)
                                       .....+||+.|+|||++.+       ..++.++|||||||++|||+||..||......     
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~  246 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM  246 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence                             0112358999999999976       45778999999999999999997776432110     


Q ss_pred             -------------HHHHHhhhhhcCCcCCCCC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          247 -------------LVMWSSMKELVDPTLGDAY--NTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       247 -------------~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                                   ............+.++..+  ....+..+.+|+.+||+.||.+|||+.++++.|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l  316 (336)
T 3g2f_A          247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL  316 (336)
T ss_dssp             TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence                         0000111122223332222  224566799999999999999999999999988643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=3.9e-29  Score=233.73  Aligned_cols=198  Identities=22%  Similarity=0.293  Sum_probs=129.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEc-------C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVE-------G  165 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~-------~  165 (363)
                      ..+|.+.++||+|+||+||+|.. .+|+.||||.+.... ......+.+|+.++.++. ||||+++++++..       .
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            35799999999999999999995 578999999986544 334678999999999996 9999999998842       1


Q ss_pred             C--eEEEEEccCCCChhhhhhh----------------------------c---cCCC-----------CceeEE-----
Q 048684          166 G--MHLILELSPHGSLASLLYA----------------------------K---WLPD-----------KWTHHI-----  196 (363)
Q Consensus       166 ~--~~lv~E~~~~gsL~~~l~~----------------------------~---~~~~-----------~~~~~~-----  196 (363)
                      .  .++||||+. |+|.+++..                            .   ....           .....+     
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            2  689999997 688776631                            0   0000           000000     


Q ss_pred             ----------------------EeecccccCCCCchhh---ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHH
Q 048684          197 ----------------------VSKIEGTFGYLPPEFF---MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS  251 (363)
Q Consensus       197 ----------------------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~  251 (363)
                                            ....+||+.|+|||++   .+..++.++|||||||++|||+||+.||........   
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---  261 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI---  261 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh---
Confidence                                  0023489999999998   566789999999999999999999999975433211   


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcCh
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDE  302 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~  302 (363)
                       .............+.    .+.+|+..||+.||.+|||+.+++++|+...
T Consensus       262 -~~~~~~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          262 -VNGKYSIPPHDTQYT----VFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             -----CCCCTTCCSSG----GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -hcCcccCCcccccch----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             112222122222233    3889999999999999999999999986543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=5.3e-29  Score=235.56  Aligned_cols=207  Identities=17%  Similarity=0.221  Sum_probs=135.6

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG--  166 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--  166 (363)
                      ......++|.+.+.||+|+||+||+|.. .+|+.||||.+......  ...+.+++..+..++|||||++++++....  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            4456678999999999999999999996 56899999998654322  346778888899999999999999875421  


Q ss_pred             ------eEEEEEccCCCChhhhhhh------------------------ccC---CCCce-----------------eEE
Q 048684          167 ------MHLILELSPHGSLASLLYA------------------------KWL---PDKWT-----------------HHI  196 (363)
Q Consensus       167 ------~~lv~E~~~~gsL~~~l~~------------------------~~~---~~~~~-----------------~~~  196 (363)
                            .++||||++++ |...+..                        ..+   .....                 ..+
T Consensus        95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence                  67999999974 3322110                        000   00000                 000


Q ss_pred             --------------EeecccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC---
Q 048684          197 --------------VSKIEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD---  258 (363)
Q Consensus       197 --------------~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~---  258 (363)
                                    .....||+.|+|||++.+.. ++.++|||||||++|||+||+.||.+................   
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence                          11235899999999997654 899999999999999999999999876544333332221110   


Q ss_pred             -------CcCC----------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 -------PTLG----------------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 -------~~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                             +...                ..........+.+|+.+||+.||.+|||+.+++++-.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  317 (360)
T 3e3p_A          254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY  317 (360)
T ss_dssp             HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred             HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence                   0000                0011123567999999999999999999999998644

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=2e-28  Score=227.37  Aligned_cols=198  Identities=18%  Similarity=0.322  Sum_probs=130.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHH-HHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDY-LSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~-~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|...+.||+|+||.||+|.. .+|+.||||.+...........+ ..+..++..++||||+++++++.... .++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            36788899999999999999996 47999999999766544333344 44555778889999999999888766 88999


Q ss_pred             EccCCCChhhhhh--------------------------hc--cCCC-----------Ccee--------------EEEe
Q 048684          172 ELSPHGSLASLLY--------------------------AK--WLPD-----------KWTH--------------HIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~--------------------------~~--~~~~-----------~~~~--------------~~~~  198 (363)
                      ||+ ++.+..+..                          ..  ....           ....              ....
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  182 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD  182 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc
Confidence            999 334433221                          11  1000           0000              0112


Q ss_pred             ecccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCC--CCCHHHHH
Q 048684          199 KIEGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGD--AYNTEQLT  271 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  271 (363)
                      ...||+.|+|||++.     ...++.++|||||||++|||++|+.||............+.....+.++.  .++.    
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  258 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSG----  258 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCH----
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCH----
Confidence            346899999999994     55789999999999999999999999986443333333333322222221  2344    


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+.+++..||+.||.+|||+.+++++
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhC
Confidence            48999999999999999999999874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=8.5e-29  Score=227.66  Aligned_cols=196  Identities=12%  Similarity=0.104  Sum_probs=141.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||.+.....  ......|.+|+.++.+++||||+++++++...+ .|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            6799999999999999999996 4589999999975542  445678999999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhccCCC-------------------Ccee------EEEe-----ecccccCCCCchhhccCCCCccc
Q 048684          172 ELSPHGSLASLLYAKWLPD-------------------KWTH------HIVS-----KIEGTFGYLPPEFFMHGIADEKT  221 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~~~~-------------------~~~~------~~~~-----~~~gt~~y~aPE~~~~~~~~~~s  221 (363)
                      ||+++|+|.+++.....+.                   ...|      .++-     -..++++|++|       ++.++
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~-------~~~~~  183 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQD  183 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTT-------CCHHH
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCC-------CCchh
Confidence            9999999999875321000                   0000      0110     11246677764       79999


Q ss_pred             eEEechhHHHHHHhCCCCCCCchhhHHH---HHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          222 DVYAYGVLLLEIITGRQALDSSQKSLVM---WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       222 DvwS~Gvvl~elltG~~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      |||||||++|||+||+.||.+.......   .........+  ........+..+.+++.+||+.||.+| |+.++++.|
T Consensus       184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L  260 (286)
T 3uqc_A          184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE--PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLM  260 (286)
T ss_dssp             HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCC--HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCC--hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHH
Confidence            9999999999999999999865432100   0000110000  000111233459999999999999999 999999998


Q ss_pred             hcC
Q 048684          299 RGD  301 (363)
Q Consensus       299 ~~~  301 (363)
                      +..
T Consensus       261 ~~~  263 (286)
T 3uqc_A          261 QQA  263 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=1.7e-28  Score=238.74  Aligned_cols=197  Identities=19%  Similarity=0.279  Sum_probs=142.5

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.|...++||+|+||+||.+...+|+.||||.+...    ....+.+|+.++.++ +|||||++++++.+.. .++||||
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            345556889999999998776667999999998643    235678999999886 8999999999888766 7899999


Q ss_pred             cCCCChhhhhhhccC--------------------------------------CC-------------------CceeE-
Q 048684          174 SPHGSLASLLYAKWL--------------------------------------PD-------------------KWTHH-  195 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~--------------------------------------~~-------------------~~~~~-  195 (363)
                      |. |+|.+++.....                                      +.                   ..... 
T Consensus        91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence            96 688877642100                                      00                   00000 


Q ss_pred             ------------------EEeecccccCCCCchhhcc-------CCCCccceEEechhHHHHHHh-CCCCCCCchhhHHH
Q 048684          196 ------------------IVSKIEGTFGYLPPEFFMH-------GIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVM  249 (363)
Q Consensus       196 ------------------~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~  249 (363)
                                        .....+||+.|+|||++.+       ..++.++|||||||++|||+| |+.||........ 
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-  248 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-  248 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-
Confidence                              0112469999999999976       678999999999999999999 9999976543321 


Q ss_pred             HHhhhhhcC-CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          250 WSSMKELVD-PTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       250 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                       ..+..... +..........+..+.+++.+||+.||.+|||+.+|+++-.
T Consensus       249 -~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~  298 (434)
T 2rio_A          249 -NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL  298 (434)
T ss_dssp             -HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             -HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence             22222222 12222234566778999999999999999999999998544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.95  E-value=1.2e-28  Score=237.49  Aligned_cols=201  Identities=16%  Similarity=0.246  Sum_probs=131.4

Q ss_pred             CCcc-CCcccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CC-eEE
Q 048684           97 NFSH-ENLIGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE--GG-MHL  169 (363)
Q Consensus        97 ~f~~-~~~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~-~~l  169 (363)
                      .|.. +++||+|+||+||+|...   +++.||||.+.....   ...+.+|+.+|+.++|||||++++++..  .. .++
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            4555 458999999999999864   578999999975432   2468899999999999999999998854  22 889


Q ss_pred             EEEccCCCChhhhhhh----------------------------------c------------cC----CCCcee-----
Q 048684          170 ILELSPHGSLASLLYA----------------------------------K------------WL----PDKWTH-----  194 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~----------------------------------~------------~~----~~~~~~-----  194 (363)
                      ||||+.+ +|.+++..                                  .            .+    ......     
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  176 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM  176 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence            9999985 66554420                                  0            00    000000     


Q ss_pred             -------------EEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhh---------HHHHH
Q 048684          195 -------------HIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKS---------LVMWS  251 (363)
Q Consensus       195 -------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---------~~~~~  251 (363)
                                   ......+||+.|+|||++.+. .++.++|||||||++|||+||++||.+....         .....
T Consensus       177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~  256 (405)
T 3rgf_A          177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR  256 (405)
T ss_dssp             TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred             CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence                         112235689999999999874 5999999999999999999999999754321         11111


Q ss_pred             hhhhhcCCcCCC-----------------------CCCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          252 SMKELVDPTLGD-----------------------AYNT---------EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       252 ~~~~~~~~~~~~-----------------------~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .+.....|....                       ....         .....+.+|+.+||+.||.+|||+.|++++-+
T Consensus       257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~  336 (405)
T 3rgf_A          257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY  336 (405)
T ss_dssp             HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence            111110000000                       0000         00345889999999999999999999998765


Q ss_pred             cC
Q 048684          300 GD  301 (363)
Q Consensus       300 ~~  301 (363)
                      ..
T Consensus       337 f~  338 (405)
T 3rgf_A          337 FL  338 (405)
T ss_dssp             GT
T ss_pred             hc
Confidence            44

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.95  E-value=2.2e-28  Score=237.73  Aligned_cols=145  Identities=21%  Similarity=0.310  Sum_probs=111.0

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~  166 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+|+.++|||||++++++...      .
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46899999999999999999985 568999999997543 334467899999999999999999999988654      3


Q ss_pred             eEEEEEccCCCChhhhhhhcc-------------------------------------CCCC---------cee------
Q 048684          167 MHLILELSPHGSLASLLYAKW-------------------------------------LPDK---------WTH------  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~---------~~~------  194 (363)
                      .|+||||+. |+|.+++....                                     +...         ...      
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~  183 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK  183 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred             EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence            799999987 58887764110                                     0000         000      


Q ss_pred             ----------------------EEEeecccccCCCCchhh-ccCCCCccceEEechhHHHHHHhCCCCC
Q 048684          195 ----------------------HIVSKIEGTFGYLPPEFF-MHGIADEKTDVYAYGVLLLEIITGRQAL  240 (363)
Q Consensus       195 ----------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~elltG~~P~  240 (363)
                                            ......+||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence                                  123456789999999986 5567999999999999999999854443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=4e-29  Score=242.13  Aligned_cols=198  Identities=19%  Similarity=0.297  Sum_probs=139.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----C---e
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG----G---M  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~---~  167 (363)
                      ..|...+.||+|+||+||+|.. .+|+.||||.+.....     .+.+|+.+|+.++|||||++++++...    .   +
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            4688899999999999999996 5699999999865421     234799999999999999999977431    1   5


Q ss_pred             EEEEEccCCCChhhhhh-----------------------------hc------c------CC-CCceeEE---------
Q 048684          168 HLILELSPHGSLASLLY-----------------------------AK------W------LP-DKWTHHI---------  196 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~-----------------------------~~------~------~~-~~~~~~~---------  196 (363)
                      ++||||+++ +|.+++.                             ..      .      +. ......+         
T Consensus       129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            689999986 4443321                             00      0      00 0000000         


Q ss_pred             -----EeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc----------CC-
Q 048684          197 -----VSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV----------DP-  259 (363)
Q Consensus       197 -----~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~----------~~-  259 (363)
                           ....+||+.|+|||++.+. .++.++|||||||++|||++|++||.+..........+....          .+ 
T Consensus       208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence                 1224689999999999765 799999999999999999999999987654433333222110          11 


Q ss_pred             -------cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 -------TLGDA-----YNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 -------~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                             .+...     +.......+.+|+.+||+.||.+|||+.+++++-.
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  339 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence                   10000     11122356999999999999999999999997644

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.95  E-value=3e-28  Score=232.87  Aligned_cols=204  Identities=19%  Similarity=0.218  Sum_probs=147.2

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CC-----CcceEEEEEEcC
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HP-----NIAKMIGYGVEG  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~  165 (363)
                      ...++|.+.+.||+|+||+||+|.. .+|+.||||.+...  ......+..|+.++..++ |+     +|+++++++...
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            3457899999999999999999985 56889999999743  233567788999988875 55     499999987765


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc----------------------CC---CCcee------------------EE-----
Q 048684          166 G-MHLILELSPHGSLASLLYAKW----------------------LP---DKWTH------------------HI-----  196 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~----------------------~~---~~~~~------------------~~-----  196 (363)
                      . .++||||+. |+|.+++....                      +.   ....|                  .+     
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            5 899999997 58887764210                      00   00000                  00     


Q ss_pred             -------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc---------
Q 048684          197 -------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT---------  260 (363)
Q Consensus       197 -------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~---------  260 (363)
                             ....+||+.|+|||++.+..++.++|||||||++|||+||++||.+................+.         
T Consensus       208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  287 (382)
T 2vx3_A          208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK  287 (382)
T ss_dssp             CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTT
T ss_pred             ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHH
Confidence                   1224589999999999999999999999999999999999999987654333322211100000         


Q ss_pred             -------C------------------------------------------CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 048684          261 -------L------------------------------------------GDAYNTEQLTRLLLIASACINQTSACRPQM  291 (363)
Q Consensus       261 -------~------------------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~  291 (363)
                             +                                          ...........+.+|+.+||+.||.+|||+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta  367 (382)
T 2vx3_A          288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP  367 (382)
T ss_dssp             HHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCH
T ss_pred             HHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCH
Confidence                   0                                          000112234578999999999999999999


Q ss_pred             HHHHHHhh
Q 048684          292 SKVVQALR  299 (363)
Q Consensus       292 ~evl~~L~  299 (363)
                      .|++++-.
T Consensus       368 ~e~L~hp~  375 (382)
T 2vx3_A          368 YYALQHSF  375 (382)
T ss_dssp             HHHTTSGG
T ss_pred             HHHhcCcc
Confidence            99997543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=2.5e-28  Score=228.25  Aligned_cols=199  Identities=16%  Similarity=0.218  Sum_probs=146.2

Q ss_pred             cCCCccCCcccccCceEEEEEEE--cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCC------cceEEEEEEcCC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL--EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN------IAKMIGYGVEGG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~  166 (363)
                      .++|.+.+.||+|+||+||+|..  .+|+.||||.+...  ......+.+|+.++..++|+|      |+++++++...+
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            36899999999999999999985  36889999999743  334577889999999887654      999999887766


Q ss_pred             -eEEEEEccCCCChhhhhhhcc---------------------------------------CCCCc--------------
Q 048684          167 -MHLILELSPHGSLASLLYAKW---------------------------------------LPDKW--------------  192 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~~~--------------  192 (363)
                       .++||||+ +|+|.+++....                                       +....              
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence             89999999 789988764210                                       00000              


Q ss_pred             -----eeEE------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh
Q 048684          193 -----THHI------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE  255 (363)
Q Consensus       193 -----~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~  255 (363)
                           ...+            ....+||+.|+|||++.+..++.++|||||||++|||+||..||............ ..
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~  248 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM-ER  248 (339)
T ss_dssp             EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH-HH
T ss_pred             cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HH
Confidence                 0000            11236899999999999999999999999999999999999999875443222111 11


Q ss_pred             hcCCcC---------------------------------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 048684          256 LVDPTL---------------------------------------GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       256 ~~~~~~---------------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      ...+..                                       ...........+.+|+.+||+.||.+|||+.++++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence            100000                                       00112234567999999999999999999999997


Q ss_pred             H
Q 048684          297 A  297 (363)
Q Consensus       297 ~  297 (363)
                      +
T Consensus       329 h  329 (339)
T 1z57_A          329 H  329 (339)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.95  E-value=1.6e-28  Score=234.93  Aligned_cols=201  Identities=14%  Similarity=0.195  Sum_probs=143.9

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC--------CCCcceEEEEEE--
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD--------HPNIAKMIGYGV--  163 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~--  163 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+...  ......+.+|+.++..++        ||||+++++++.  
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            36899999999999999999984 56899999999743  334578899999999985        788999999776  


Q ss_pred             --cC-CeEEEEEccCCCChhhhhh---------------------------hc--cCCC-----------Cc--------
Q 048684          164 --EG-GMHLILELSPHGSLASLLY---------------------------AK--WLPD-----------KW--------  192 (363)
Q Consensus       164 --~~-~~~lv~E~~~~gsL~~~l~---------------------------~~--~~~~-----------~~--------  192 (363)
                        .. ..++||||+. |+|.+++.                           ..  ....           ..        
T Consensus       114 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~  192 (397)
T 1wak_A          114 GVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA  192 (397)
T ss_dssp             ETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred             CCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence              22 3789999994 56554432                           11  0000           00        


Q ss_pred             -----------------------------------------eeEE------------EeecccccCCCCchhhccCCCCc
Q 048684          193 -----------------------------------------THHI------------VSKIEGTFGYLPPEFFMHGIADE  219 (363)
Q Consensus       193 -----------------------------------------~~~~------------~~~~~gt~~y~aPE~~~~~~~~~  219 (363)
                                                               ...+            ....+||+.|+|||++.+..++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  272 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT  272 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence                                                     0000            11235899999999999999999


Q ss_pred             cceEEechhHHHHHHhCCCCCCCchhh-----HHHHHhhhhhcCC-----------------------cC----------
Q 048684          220 KTDVYAYGVLLLEIITGRQALDSSQKS-----LVMWSSMKELVDP-----------------------TL----------  261 (363)
Q Consensus       220 ~sDvwS~Gvvl~elltG~~P~~~~~~~-----~~~~~~~~~~~~~-----------------------~~----------  261 (363)
                      ++|||||||++|||+||+.||......     ......+......                       .+          
T Consensus       273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (397)
T 1wak_A          273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE  352 (397)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence            999999999999999999999754311     1111111110000                       00          


Q ss_pred             ----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          262 ----GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       262 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                          ....+......+.+|+.+||+.||.+|||+.+++++-
T Consensus       353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  393 (397)
T 1wak_A          353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP  393 (397)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred             hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence                0123566777899999999999999999999999753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=6.1e-29  Score=233.67  Aligned_cols=198  Identities=15%  Similarity=0.153  Sum_probs=119.1

Q ss_pred             cCCCccCC-cccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHH-HHHHhCCCCCcceEEEEEEc----CC-
Q 048684           95 TDNFSHEN-LIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSEL-GIIVHVDHPNIAKMIGYGVE----GG-  166 (363)
Q Consensus        95 ~~~f~~~~-~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~----~~-  166 (363)
                      .++|.+.+ +||+|+||+||+|.. .+|+.||||.+....      ...+|+ ..+..++||||+++++++..    .. 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            45788854 699999999999986 469999999996531      222333 34566799999999998764    22 


Q ss_pred             eEEEEEccCCCChhhhhhhcc---------------------------------------CCC---Cce-----------
Q 048684          167 MHLILELSPHGSLASLLYAKW---------------------------------------LPD---KWT-----------  193 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~---~~~-----------  193 (363)
                      .++|||||++|+|.+++....                                       +..   ...           
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            789999999999988874210                                       000   000           


Q ss_pred             --eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--cCCcCCCCCCHHH
Q 048684          194 --HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--VDPTLGDAYNTEQ  269 (363)
Q Consensus       194 --~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  269 (363)
                        .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||................  .....+.......
T Consensus       181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (336)
T 3fhr_A          181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV  260 (336)
T ss_dssp             C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTC
T ss_pred             ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccC
Confidence              001123468999999999988899999999999999999999999997654332211111100  0011111111223


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ...+.+|+..||+.||.+|||+.+++++-
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp  289 (336)
T 3fhr_A          261 SEDAKQLIRLLLKTDPTERLTITQFMNHP  289 (336)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            44599999999999999999999999854

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=5.4e-28  Score=229.57  Aligned_cols=195  Identities=14%  Similarity=0.130  Sum_probs=144.4

Q ss_pred             HHhcCCCccCCcccccCceEEEEEE------EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC---CCCcceEEEEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQ------LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD---HPNIAKMIGYG  162 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~  162 (363)
                      ....++|.+.+.||+|+||+||+|.      ..+++.||||.+....    ...+..|+.++..++   |+||+++++++
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN----PWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            3445789999999999999999993      4568899999997543    356788888888887   99999999988


Q ss_pred             EcCC-eEEEEEccCCCChhhhhhhc------------------------------------------cCCC---------
Q 048684          163 VEGG-MHLILELSPHGSLASLLYAK------------------------------------------WLPD---------  190 (363)
Q Consensus       163 ~~~~-~~lv~E~~~~gsL~~~l~~~------------------------------------------~~~~---------  190 (363)
                      ...+ .++|||||++|+|.+++...                                          .+..         
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~  216 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED  216 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence            7655 89999999999999887410                                          0000         


Q ss_pred             --Cce-----------------eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHH
Q 048684          191 --KWT-----------------HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWS  251 (363)
Q Consensus       191 --~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~  251 (363)
                        ...                 .......+||+.|+|||++.+..++.++|||||||++|||+||+.||.......    
T Consensus       217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----  292 (365)
T 3e7e_A          217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----  292 (365)
T ss_dssp             --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred             cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence              000                 012233469999999999999999999999999999999999999996543211    


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHhhc
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACR-PQMSKVVQALRG  300 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~  300 (363)
                         ......+....   ....+.+++..|++.+|..| |++.++.+.|+.
T Consensus       293 ---~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          293 ---CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             ---EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             ---eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence               01111111111   23457789999999999999 667777776653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=1.5e-28  Score=236.04  Aligned_cols=199  Identities=17%  Similarity=0.231  Sum_probs=138.3

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-------eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-------MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------~~  168 (363)
                      .+|...++||+|+||+||+|....+..||+|++.....     ...+|+.+++.++|||||++++++....       .+
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            46899999999999999999986666699998864332     1236999999999999999999875322       67


Q ss_pred             EEEEccCCCChhhhh----------------------------hhc------c------CC-CCceeE------------
Q 048684          169 LILELSPHGSLASLL----------------------------YAK------W------LP-DKWTHH------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l----------------------------~~~------~------~~-~~~~~~------------  195 (363)
                      +|||||+++.+....                            |..      .      +. ......            
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA  194 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence            999999875332211                            100      0      00 011000            


Q ss_pred             --EEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC--------------
Q 048684          196 --IVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD--------------  258 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~--------------  258 (363)
                        .....+||+.|+|||++.+. .++.++|||||||++|||++|++||.+..........+.....              
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence              01124589999999999765 5999999999999999999999999876544333332221100              


Q ss_pred             -CcCCC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          259 -PTLGD--------AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       259 -~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                       ..++.        .+.......+.+|+.+||+.||.+|||+.+++++-.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (394)
T 4e7w_A          275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF  324 (394)
T ss_dssp             SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChh
Confidence             00000        011123345999999999999999999999998633

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=1.2e-27  Score=235.30  Aligned_cols=199  Identities=20%  Similarity=0.233  Sum_probs=144.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCC-eEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH-PNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~-~~lv~  171 (363)
                      .++|.+.++||+|+||.||+|.. .+|+.||||++......   ..+..|+.++..++| ++|+.+..++.... .+|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            46899999999999999999985 67999999998754432   357899999999987 55555555666655 78999


Q ss_pred             EccCCCChhhhhhhc--------------------------------------cCC---CCceeEE--------------
Q 048684          172 ELSPHGSLASLLYAK--------------------------------------WLP---DKWTHHI--------------  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~--------------------------------------~~~---~~~~~~~--------------  196 (363)
                      ||+ +|+|.+++...                                      .+.   ......+              
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence            999 89998887410                                      000   0000000              


Q ss_pred             --------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhh---HHHHHhhhhhcCC---cCC
Q 048684          197 --------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS---LVMWSSMKELVDP---TLG  262 (363)
Q Consensus       197 --------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~---~~~~~~~~~~~~~---~~~  262 (363)
                              ....+||+.|+|||++.+..++.++|||||||+||||++|+.||.+....   .............   .+.
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~  241 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC  241 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh
Confidence                    11456999999999999999999999999999999999999999864321   1111111111111   111


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ..++.    .+.+|+..||+.||.+||++.+|++.|+..
T Consensus       242 ~~~p~----~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          242 RGYPT----EFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             TTSCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             cCCcH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            22343    499999999999999999999999987654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=2.1e-29  Score=239.98  Aligned_cols=201  Identities=11%  Similarity=0.031  Sum_probs=130.2

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhC--CCCCcceEE-------EEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHV--DHPNIAKMI-------GYGV  163 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~  163 (363)
                      .+|...+.||+|+||+||+|.. .+|+.||||.+.....  ......+.+|+.++..+  +|||||+++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            4588889999999999999995 5799999999986542  23456677885544444  699988855       3332


Q ss_pred             c------------------CCeEEEEEccCCCChhhhhhhc--cCCCCce------------------------------
Q 048684          164 E------------------GGMHLILELSPHGSLASLLYAK--WLPDKWT------------------------------  193 (363)
Q Consensus       164 ~------------------~~~~lv~E~~~~gsL~~~l~~~--~~~~~~~------------------------------  193 (363)
                      .                  ...++|||||+ |+|.+++...  .......                              
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            2                  12689999999 8999887531  1111000                              


Q ss_pred             ------------eE------------EEeecccccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCCCchhhH
Q 048684          194 ------------HH------------IVSKIEGTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALDSSQKSL  247 (363)
Q Consensus       194 ------------~~------------~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~  247 (363)
                                  ..            ......||+.|+|||++.+  ..++.++|||||||++|||+||+.||.......
T Consensus       221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  300 (371)
T 3q60_A          221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI  300 (371)
T ss_dssp             SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred             CHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence                        00            0112357799999999987  679999999999999999999999998753221


Q ss_pred             H-HHHhh--hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          248 V-MWSSM--KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       248 ~-~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      . .+...  .......+........+..+.+|+.+||+.||.+|||+.+++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             TTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             ccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1 00000  00000111111111234459999999999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=2.8e-28  Score=236.98  Aligned_cols=196  Identities=16%  Similarity=0.206  Sum_probs=139.4

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .+|...++||+|+||+||.....+|+.||||++.....    ..+.+|+.+|..+ +|||||++++++.+.. .++||||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            46888899999999997655556799999999975432    2356899999999 7999999999888776 7899999


Q ss_pred             cCCCChhhhhhhcc--------------------------------CCCCcee---------------------------
Q 048684          174 SPHGSLASLLYAKW--------------------------------LPDKWTH---------------------------  194 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------~~~~~~~---------------------------  194 (363)
                      |. |+|.+++....                                .+.....                           
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            97 58887764110                                0000000                           


Q ss_pred             --EEEeecccccCCCCchhhc---cCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHH
Q 048684          195 --HIVSKIEGTFGYLPPEFFM---HGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       195 --~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (363)
                        ......+||+.|+|||++.   ...++.++|||||||++|||+| |..||..........  ......... ......
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--~~~~~~~~~-~~~~~~  255 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--LLGACSLDC-LHPEKH  255 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--HTTCCCCTT-SCTTCH
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--HhccCCccc-cCcccc
Confidence              0112346999999999997   4567889999999999999999 999996543332221  111111111 111223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ....+.+|+.+||+.||.+|||+.+|+++-.
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rps~~evl~hp~  286 (432)
T 3p23_A          256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPF  286 (432)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHTSTT
T ss_pred             ccHHHHHHHHHHHhCCHhhCCCHHHHHhCcc
Confidence            4556889999999999999999999997543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.7e-29  Score=255.02  Aligned_cols=201  Identities=18%  Similarity=0.234  Sum_probs=145.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEc------C-Ce
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE------G-GM  167 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~-~~  167 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+...........|.+|+.++.+++|||||++++++..      + ..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6899999999999999999985 56899999999766555567789999999999999999999998654      2 27


Q ss_pred             EEEEEccCCCChhhhhhhcc----C------------------------------CCCcee-------------------
Q 048684          168 HLILELSPHGSLASLLYAKW----L------------------------------PDKWTH-------------------  194 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~----~------------------------------~~~~~~-------------------  194 (363)
                      ++|||||++|+|.+++....    +                              +.....                   
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            89999999999998875211    0                              000000                   


Q ss_pred             ----EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh--------------hhhh
Q 048684          195 ----HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS--------------MKEL  256 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~--------------~~~~  256 (363)
                          .......||+.|+|||++.+..++.++|||||||++|+|+||..||.+..........              ....
T Consensus       174 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~  253 (676)
T 3qa8_A          174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGA  253 (676)
T ss_dssp             TTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSS
T ss_pred             cccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccc
Confidence                0012246899999999999999999999999999999999999999764322110000              0000


Q ss_pred             c----CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 048684          257 V----DPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       257 ~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      .    ....+..........+.+++..||+.||.+|||+.++++
T Consensus       254 ~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~  297 (676)
T 3qa8_A          254 VKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN  297 (676)
T ss_dssp             CCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred             cccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence            0    001112234456778999999999999999999988764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=2.1e-28  Score=232.43  Aligned_cols=201  Identities=15%  Similarity=0.198  Sum_probs=144.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-----------CCCcceEEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-----------HPNIAKMIGYGV  163 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~  163 (363)
                      ++|.+.+.||+|+||+||+|.. .+|+.||||.+....  .....+.+|+.++.+++           ||||+++++++.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            6899999999999999999985 678999999997532  23567889999999886           899999999876


Q ss_pred             cC-----CeEEEEEccCCCChhhhhhh---------------------------c--cCC-----CCcee----------
Q 048684          164 EG-----GMHLILELSPHGSLASLLYA---------------------------K--WLP-----DKWTH----------  194 (363)
Q Consensus       164 ~~-----~~~lv~E~~~~gsL~~~l~~---------------------------~--~~~-----~~~~~----------  194 (363)
                      ..     ..++||||+ +|+|.+++..                           .  ...     .....          
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence            43     378999999 8898887642                           0  000     00000          


Q ss_pred             E--E------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH-----HHHHhhhh
Q 048684          195 H--I------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL-----VMWSSMKE  255 (363)
Q Consensus       195 ~--~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~-----~~~~~~~~  255 (363)
                      .  +            ....+||+.|+|||++.+..++.++|||||||++|||+||+.||.......     .....+..
T Consensus       176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (373)
T 1q8y_A          176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  255 (373)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence            0  0            012358999999999999999999999999999999999999998643210     00001100


Q ss_pred             hcCCc-------------------------------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          256 LVDPT-------------------------------------LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       256 ~~~~~-------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      ...+.                                     ....++......+.+|+.+||+.||.+|||+.+++++-
T Consensus       256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  335 (373)
T 1q8y_A          256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP  335 (373)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred             hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence            00000                                     00124456778899999999999999999999999854


Q ss_pred             h
Q 048684          299 R  299 (363)
Q Consensus       299 ~  299 (363)
                      .
T Consensus       336 ~  336 (373)
T 1q8y_A          336 W  336 (373)
T ss_dssp             G
T ss_pred             h
Confidence            3

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=227.09  Aligned_cols=195  Identities=19%  Similarity=0.360  Sum_probs=139.3

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhC----CCCCcceEEEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHV----DHPNIAKMIGYG  162 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l----~H~niv~l~~~~  162 (363)
                      ...++|...+.||+|+||.||+|.. .+|+.||||.+......     .....+.+|+.++.++    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457899999999999999999984 67899999999754321     1233466899999998    899999999987


Q ss_pred             EcCC-eEEEEEc-cCCCChhhhhhhcc-------------------------------------CC-CCceeE-------
Q 048684          163 VEGG-MHLILEL-SPHGSLASLLYAKW-------------------------------------LP-DKWTHH-------  195 (363)
Q Consensus       163 ~~~~-~~lv~E~-~~~gsL~~~l~~~~-------------------------------------~~-~~~~~~-------  195 (363)
                      ...+ .++|||| +.+++|.+++....                                     +. ......       
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            7655 8899999 78999988874210                                     00 010000       


Q ss_pred             ------EEeecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHH
Q 048684          196 ------IVSKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTE  268 (363)
Q Consensus       196 ------~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (363)
                            ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......      ...  ...+....+. 
T Consensus       188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~--~~~~~~~~~~-  258 (312)
T 2iwi_A          188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------LEA--ELHFPAHVSP-  258 (312)
T ss_dssp             EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHT--CCCCCTTSCH-
T ss_pred             hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------hhh--ccCCcccCCH-
Confidence                  0122358999999999987776 45999999999999999999999764321      111  1122233444 


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          269 QLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       269 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                         .+.+++.+||+.||.+|||+.+++++-.
T Consensus       259 ---~~~~li~~~l~~~p~~Rps~~e~l~~~~  286 (312)
T 2iwi_A          259 ---DCCALIRRCLAPKPSSRPSLEEILLDPW  286 (312)
T ss_dssp             ---HHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred             ---HHHHHHHHHccCChhhCcCHHHHhcChh
Confidence               4899999999999999999999998544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=1.9e-28  Score=228.61  Aligned_cols=196  Identities=17%  Similarity=0.324  Sum_probs=145.5

Q ss_pred             HHhcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCC--CCCcceEEEEEE
Q 048684           92 QAATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVD--HPNIAKMIGYGV  163 (363)
Q Consensus        92 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~--H~niv~l~~~~~  163 (363)
                      ....++|.+.+.||+|+||+||+|.. .+|+.||||.+......     .....+.+|+.++.+++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34457899999999999999999984 67899999998643211     11245778999999996  599999999988


Q ss_pred             cCC-eEEEEEccCC-CChhhhhhhcc-------------------------------------CC-CCceeE--------
Q 048684          164 EGG-MHLILELSPH-GSLASLLYAKW-------------------------------------LP-DKWTHH--------  195 (363)
Q Consensus       164 ~~~-~~lv~E~~~~-gsL~~~l~~~~-------------------------------------~~-~~~~~~--------  195 (363)
                      ..+ .++||||+.+ ++|.+++....                                     +. ......        
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            766 7899999986 88888764110                                     00 000000        


Q ss_pred             -----EEeecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          196 -----IVSKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       196 -----~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                           ......||+.|+|||++.+..+ +.++|||||||++|||+||+.||......      ...  ........+.  
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~--~~~~~~~~~~--  268 (320)
T 3a99_A          199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------IRG--QVFFRQRVSS--  268 (320)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------HHC--CCCCSSCCCH--
T ss_pred             ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------hcc--cccccccCCH--
Confidence                 0122458999999999987765 78999999999999999999999764321      111  1122233444  


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                        .+.+++.+||+.||.+|||+.+++++-.
T Consensus       269 --~~~~li~~~l~~dp~~Rps~~~ll~hp~  296 (320)
T 3a99_A          269 --ECQHLIRWCLALRPSDRPTFEEIQNHPW  296 (320)
T ss_dssp             --HHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             --HHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence              4899999999999999999999998644

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=2.2e-27  Score=223.43  Aligned_cols=200  Identities=16%  Similarity=0.200  Sum_probs=142.9

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCC-cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCC------cceEEEEEEcCC
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDG-QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN------IAKMIGYGVEGG  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g-~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~  166 (363)
                      .++|.+.+.||+|+||+||+|.. .++ ..||||.+...  ......+.+|+.++..++|+|      ++.+++++....
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            36899999999999999999985 344 78999999743  234567889999999987666      899999877655


Q ss_pred             -eEEEEEccCCCChhhhhhhcc---------------------------------CCCC---------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKW---------------------------------LPDK---------------------  191 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~---------------------------------~~~~---------------------  191 (363)
                       .++||||+ +|+|.+++....                                 .+..                     
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~  174 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK  174 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred             eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccc
Confidence             88999999 556655543110                                 0000                     


Q ss_pred             ----ceeEE------------EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh
Q 048684          192 ----WTHHI------------VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE  255 (363)
Q Consensus       192 ----~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~  255 (363)
                          ....+            ....+||+.|+|||++.+..++.++|||||||++|||+||+.||............ ..
T Consensus       175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~  253 (355)
T 2eu9_A          175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM-EK  253 (355)
T ss_dssp             EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HH
T ss_pred             ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH
Confidence                00000            11246899999999999999999999999999999999999999875443222111 11


Q ss_pred             hcCCcC---------------------------------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 048684          256 LVDPTL---------------------------------------GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ  296 (363)
Q Consensus       256 ~~~~~~---------------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~  296 (363)
                      ...+..                                       ...........+.+|+.+||+.||.+|||+.++++
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000                                       00112233557899999999999999999999997


Q ss_pred             Hh
Q 048684          297 AL  298 (363)
Q Consensus       297 ~L  298 (363)
                      +-
T Consensus       334 hp  335 (355)
T 2eu9_A          334 HP  335 (355)
T ss_dssp             SG
T ss_pred             Ch
Confidence            53

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.4e-28  Score=250.48  Aligned_cols=193  Identities=18%  Similarity=0.232  Sum_probs=141.2

Q ss_pred             cCCCccCCcccccCceEEEEEEEc--CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLE--DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      .++|.+.+.||+|+||+||+|...  +|+.||||.+...........|.+|+.++.+++|||||++++++...+      
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            478999999999999999999864  689999999976555555678999999999999999999999887543      


Q ss_pred             eEEEEEccCCCChhhhhhhc-----------------------------c------CCCCcee----------EEEeecc
Q 048684          167 MHLILELSPHGSLASLLYAK-----------------------------W------LPDKWTH----------HIVSKIE  201 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-----------------------------~------~~~~~~~----------~~~~~~~  201 (363)
                      .||||||+++|+|.+++...                             .      +......          ......+
T Consensus       159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~  238 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLY  238 (681)
T ss_dssp             EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCC
T ss_pred             eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccC
Confidence            59999999999998765310                             0      0000000          0012346


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|+|||++.++. +.++|||||||++|+|++|.+||.+....        . .   ............+.+|+.+||
T Consensus       239 gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~-~---~~~~~~~~~~~~l~~li~~~l  305 (681)
T 2pzi_A          239 GTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD--------G-L---PEDDPVLKTYDSYGRLLRRAI  305 (681)
T ss_dssp             CCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS--------S-C---CTTCHHHHHCHHHHHHHHHHT
T ss_pred             CCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc--------c-c---cccccccccCHHHHHHHhhhc
Confidence            999999999997654 99999999999999999999998753211        0 0   001111123356889999999


Q ss_pred             ccCCCCCCCH-HHHHHHhhc
Q 048684          282 NQTSACRPQM-SKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~-~evl~~L~~  300 (363)
                      +.||.+||+. .++...|..
T Consensus       306 ~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          306 DPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CSSGGGSCSSHHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHHH
Confidence            9999999964 445555543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=9.7e-26  Score=208.11  Aligned_cols=195  Identities=11%  Similarity=0.150  Sum_probs=129.0

Q ss_pred             CCCccC-CcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHH-HhCCCCCcceEEEEEEc----C-Ce
Q 048684           96 DNFSHE-NLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGII-VHVDHPNIAKMIGYGVE----G-GM  167 (363)
Q Consensus        96 ~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~-~~  167 (363)
                      ++|... ++||+|+||.||+|.. .+|+.||||.+..      ...+.+|+.++ +.++||||+++++++..    . ..
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            467666 7899999999999985 6789999999964      24567889888 55689999999998764    2 37


Q ss_pred             EEEEEccCCCChhhhhhhcc---CCCCceeE--------------------------EEeec---ccc---cCCCCchhh
Q 048684          168 HLILELSPHGSLASLLYAKW---LPDKWTHH--------------------------IVSKI---EGT---FGYLPPEFF  212 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~---~~~~~~~~--------------------------~~~~~---~gt---~~y~aPE~~  212 (363)
                      ++||||+++|+|.+++....   ++......                          ++-..   .+.   ..|-..+.+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            89999999999999886421   11110000                          00000   000   011122333


Q ss_pred             ccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCC----HHHHHHHHHHHHHccccCCCCC
Q 048684          213 MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYN----TEQLTRLLLIASACINQTSACR  288 (363)
Q Consensus       213 ~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~R  288 (363)
                      .+..++.++|||||||++|||+||+.||.....................  ..+    ......+.+++..||+.||.+|
T Consensus       171 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~R  248 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQR  248 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhC
Confidence            4567899999999999999999999999765432211111111111000  011    1234559999999999999999


Q ss_pred             CCHHHHHHHh
Q 048684          289 PQMSKVVQAL  298 (363)
Q Consensus       289 Pt~~evl~~L  298 (363)
                      ||+.+++++-
T Consensus       249 ps~~e~l~hp  258 (299)
T 3m2w_A          249 MTITEFMNHP  258 (299)
T ss_dssp             CCHHHHHTSH
T ss_pred             CCHHHHhcCh
Confidence            9999999753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.89  E-value=1.4e-24  Score=209.62  Aligned_cols=192  Identities=10%  Similarity=0.035  Sum_probs=128.0

Q ss_pred             hcCCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCCC-CCcc----------e--
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDH-PNIA----------K--  157 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~H-~niv----------~--  157 (363)
                      .+..|...++||+|+||+||+|. ..+|+.||||++.....  ....+.|.+|+.++..+.| +|..          .  
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            34457788899999999999999 56799999999874332  2235679999999999987 3221          1  


Q ss_pred             ---------EEEEEEc------CCeEEEEEccCCCChhhhhhh--------------------------------c----
Q 048684          158 ---------MIGYGVE------GGMHLILELSPHGSLASLLYA--------------------------------K----  186 (363)
Q Consensus       158 ---------l~~~~~~------~~~~lv~E~~~~gsL~~~l~~--------------------------------~----  186 (363)
                               +..+...      ...+++|+++ +|+|.+++..                                .    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence                     1111111      1245666655 5788877620                                0    


Q ss_pred             --------cCCCCce------------eEEEeecccccCCCCchhh----------ccCCCCccceEEechhHHHHHHhC
Q 048684          187 --------WLPDKWT------------HHIVSKIEGTFGYLPPEFF----------MHGIADEKTDVYAYGVLLLEIITG  236 (363)
Q Consensus       187 --------~~~~~~~------------~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwS~Gvvl~elltG  236 (363)
                              .+.....            .......+| +.|+|||++          ....++.++|||||||++|||+||
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg  313 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA  313 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence                    0000000            011234568 999999999          555689999999999999999999


Q ss_pred             CCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          237 RQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       237 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +.||.........    ......  ....+    ..+.+|+..||+.||.+|||+.+++++
T Consensus       314 ~~Pf~~~~~~~~~----~~~~~~--~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          314 DLPNTDDAALGGS----EWIFRS--CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             SCCCCTTGGGSCS----GGGGSS--CCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCCCCcchhhhH----HHHHhh--cccCC----HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            9999865432211    111110  11234    349999999999999999999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.88  E-value=3.3e-24  Score=201.04  Aligned_cols=196  Identities=13%  Similarity=0.077  Sum_probs=134.3

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-------chhHHHHHHHHHHHHHhCC---------CCCcceE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-------PEEMTTDYLSELGIIVHVD---------HPNIAKM  158 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-------~~~~~~~~~~E~~~l~~l~---------H~niv~l  158 (363)
                      .++|...+.||+|+||+||+|.. +|+.||||.+....       .....+.+.+|+.+++.++         |||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35788999999999999999988 68999999997542       1223478889999998885         8888888


Q ss_pred             EEEEE-------------------------------cCCeEEEEEccCCCChhhhhhh----------------------
Q 048684          159 IGYGV-------------------------------EGGMHLILELSPHGSLASLLYA----------------------  185 (363)
Q Consensus       159 ~~~~~-------------------------------~~~~~lv~E~~~~gsL~~~l~~----------------------  185 (363)
                      .+.+.                               ....++|||||++|++.+.+..                      
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            88543                               3458999999999976554421                      


Q ss_pred             ---cc-C-----CC------Cc--------------------eeEE----------EeecccccCCCCchhhccCCCCcc
Q 048684          186 ---KW-L-----PD------KW--------------------THHI----------VSKIEGTFGYLPPEFFMHGIADEK  220 (363)
Q Consensus       186 ---~~-~-----~~------~~--------------------~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~  220 (363)
                         .. +     +.      ..                    ...+          ....+||+.|+|||++.+.. +.+
T Consensus       178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~~  256 (336)
T 2vuw_A          178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DYQ  256 (336)
T ss_dssp             HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SHH
T ss_pred             HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-ccc
Confidence               00 0     00      00                    0000          01236999999999998766 999


Q ss_pred             ceEEechhH-HHHHHhCCCCCCCchhhHHHHHhhh-hh-cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH-H
Q 048684          221 TDVYAYGVL-LLEIITGRQALDSSQKSLVMWSSMK-EL-VDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVV-Q  296 (363)
Q Consensus       221 sDvwS~Gvv-l~elltG~~P~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl-~  296 (363)
                      +||||||++ .+++++|..||............+. .. .............+..+.+|+.+||+.|     |+.+++ +
T Consensus       257 ~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          257 FDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             HHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHH
T ss_pred             eehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhc
Confidence            999998777 7789999999854211011111111 11 1111112223457788999999999976     999988 5


Q ss_pred             H
Q 048684          297 A  297 (363)
Q Consensus       297 ~  297 (363)
                      +
T Consensus       332 H  332 (336)
T 2vuw_A          332 H  332 (336)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.56  E-value=1.7e-16  Score=158.96  Aligned_cols=136  Identities=11%  Similarity=0.012  Sum_probs=80.2

Q ss_pred             cccccCceEEEEEE-EcCCcEEEEEEecCCC---------chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684          103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS---------PEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus       103 ~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~---------~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ..+.|++|.+..++ .-.|..||||.+....         .+...+.|.+|+++|+++ .|+||+++++|+.+.+ .|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            46778888777765 4568999999996542         123456799999999999 6999999999998876 8999


Q ss_pred             EEccCCCChhhhhhhcc----------------------------------CCCCcee---------------EEEeecc
Q 048684          171 LELSPHGSLASLLYAKW----------------------------------LPDKWTH---------------HIVSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~----------------------------------~~~~~~~---------------~~~~~~~  201 (363)
                      ||||+||+|.++|....                                  +..+...               ......+
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~v  400 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLV  400 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHH
T ss_pred             EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCce
Confidence            99999999999885210                                  0000000               0122357


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCC
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQA  239 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P  239 (363)
                      ||++|||||++.+ .+..++|+||+|+++++|.+|..|
T Consensus       401 GTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          401 QSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             HHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             echhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            9999999999965 567889999999998887665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.51  E-value=5.3e-15  Score=147.23  Aligned_cols=142  Identities=14%  Similarity=0.082  Sum_probs=97.5

Q ss_pred             ccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc--h-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeEEE
Q 048684           99 SHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP--E-----EMTTDYLSELGIIVHVDHPNIAKMIGYGVE-GGMHLI  170 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~--~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~lv  170 (363)
                      ...++||+|+||+||+|.. .+..+|+|.......  .     ...+.|.+|+.++.+++||||+++..++.. ...+||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            4467899999999999955 478899998753321  1     123568999999999999999955554443 448999


Q ss_pred             EEccCCCChhhhhhh-----------------------ccCCCCc----eeEE----------------------Eeecc
Q 048684          171 LELSPHGSLASLLYA-----------------------KWLPDKW----THHI----------------------VSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~-----------------------~~~~~~~----~~~~----------------------~~~~~  201 (363)
                      ||||++|+|.+++..                       ...+...    ...+                      ...++
T Consensus       418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~  497 (540)
T 3en9_A          418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVL  497 (540)
T ss_dssp             EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhc
Confidence            999999999887642                       0111110    0000                      12457


Q ss_pred             cccCCCCchhhcc--CCCCccceEEechhHHHHHHhCCCCCC
Q 048684          202 GTFGYLPPEFFMH--GIADEKTDVYAYGVLLLEIITGRQALD  241 (363)
Q Consensus       202 gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~P~~  241 (363)
                      ||+.|||||++..  ..|+..+|+||.++-..+.+.++.+|.
T Consensus       498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            9999999999987  578999999999999999988887774

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.03  E-value=3.4e-10  Score=103.13  Aligned_cols=92  Identities=15%  Similarity=0.096  Sum_probs=71.7

Q ss_pred             CHHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCch-----------------hHHHHHHHHHHHHHh
Q 048684           87 ALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPE-----------------EMTTDYLSELGIIVH  149 (363)
Q Consensus        87 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~-----------------~~~~~~~~E~~~l~~  149 (363)
                      .+..+......|.+.+.||+|+||.||+|...+|+.||||.+......                 .....+.+|+.++.+
T Consensus        81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~  160 (282)
T 1zar_A           81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK  160 (282)
T ss_dssp             HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence            344555666778888999999999999999877999999999643211                 134678999999999


Q ss_pred             CCCCCcceEEEEEEcCCeEEEEEccCCCChhh
Q 048684          150 VDHPNIAKMIGYGVEGGMHLILELSPHGSLAS  181 (363)
Q Consensus       150 l~H~niv~l~~~~~~~~~~lv~E~~~~gsL~~  181 (363)
                      ++  | +++++++..+..++|||||++|+|.+
T Consensus       161 l~--~-~~v~~~~~~~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          161 LQ--G-LAVPKVYAWEGNAVLMELIDAKELYR  189 (282)
T ss_dssp             TT--T-SSSCCEEEEETTEEEEECCCCEEGGG
T ss_pred             cc--C-CCcCeEEeccceEEEEEecCCCcHHH
Confidence            99  4 55555555566899999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.47  E-value=1.7e-07  Score=84.02  Aligned_cols=77  Identities=17%  Similarity=0.128  Sum_probs=57.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcE--EEEEEecCCCch-----------------------hHHHHHHHHHHHHHh
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQF--VAIKRLTRGSPE-----------------------EMTTDYLSELGIIVH  149 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~--vAvK~~~~~~~~-----------------------~~~~~~~~E~~~l~~  149 (363)
                      .-|.+.+.||+|+||.||+|.. .+|+.  ||||.+......                       .....+.+|+.+|..
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3467788999999999999996 78999  999987543211                       112367899999999


Q ss_pred             CCCCCc--ceEEEEEEcCCeEEEEEccC
Q 048684          150 VDHPNI--AKMIGYGVEGGMHLILELSP  175 (363)
Q Consensus       150 l~H~ni--v~l~~~~~~~~~~lv~E~~~  175 (363)
                      +.|++|  ..++++   ...+|||||+.
T Consensus       127 l~~~~i~~p~~~~~---~~~~lVmE~~g  151 (258)
T 1zth_A          127 AKEAGVSVPQPYTY---MKNVLLMEFIG  151 (258)
T ss_dssp             HHHTTCCCCCEEEE---ETTEEEEECCE
T ss_pred             HHhCCCCCCeEEEc---CCCEEEEEecC
Confidence            988764  444443   35789999994

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.28  E-value=8.3e-07  Score=83.90  Aligned_cols=95  Identities=15%  Similarity=0.149  Sum_probs=60.5

Q ss_pred             HHHHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc-------------hhHHHHH--------HHHHHH
Q 048684           88 LSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-------------EEMTTDY--------LSELGI  146 (363)
Q Consensus        88 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~-------------~~~~~~~--------~~E~~~  146 (363)
                      +..+..-..-|.+.+.||.|+||.||+|...+|+.||||+++....             ......+        ..|...
T Consensus        87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n  166 (397)
T 4gyi_A           87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF  166 (397)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            3444444455999999999999999999988899999998753210             0001112        245566


Q ss_pred             HHhCCCCCcceEEEEEEcCCeEEEEEccCCCChhhhh
Q 048684          147 IVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLL  183 (363)
Q Consensus       147 l~~l~H~niv~l~~~~~~~~~~lv~E~~~~gsL~~~l  183 (363)
                      |.++.+.++.-..-+.. ...+|||||++|++|..+.
T Consensus       167 L~rL~~~gv~vp~p~~~-~~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          167 MKALYEEGFPVPEPIAQ-SRHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             HHHHHHTTCSCCCEEEE-ETTEEEEECCSCEEGGGCC
T ss_pred             HHHHHhcCCCCCeeeec-cCceEEEEecCCccHhhhc
Confidence            66664444322111222 2347999999998886654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.55  E-value=0.00013  Score=64.68  Aligned_cols=88  Identities=14%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             HhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEE
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv  170 (363)
                      ...+.|.....+|.|+++.||++... |..+++|......... ...+.+|+.++..+. |..+.++++++...+ .|+|
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            34467888888899999999999854 6789999986421111 235888999999885 678889999887665 7899


Q ss_pred             EEccCCCChhhh
Q 048684          171 LELSPHGSLASL  182 (363)
Q Consensus       171 ~E~~~~gsL~~~  182 (363)
                      |||++|.+|.+.
T Consensus        89 ~e~i~G~~l~~~  100 (263)
T 3tm0_A           89 MSEADGVLCSEE  100 (263)
T ss_dssp             EECCSSEEHHHH
T ss_pred             EEecCCeehhhc
Confidence            999999988764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.29  E-value=0.00021  Score=62.87  Aligned_cols=81  Identities=15%  Similarity=0.136  Sum_probs=59.0

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCC--cceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN--IAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~-~~lv~E  172 (363)
                      .++....+.+.|..+.||++...+|..++||......    ...+..|+.++..+.+.+  +.+++++...++ .++|||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            3454443344666799999987778889999976431    245778999999886544  456888776654 799999


Q ss_pred             ccCCCChh
Q 048684          173 LSPHGSLA  180 (363)
Q Consensus       173 ~~~~gsL~  180 (363)
                      |++|.+|.
T Consensus        96 ~i~G~~l~  103 (264)
T 1nd4_A           96 EVPGQDLL  103 (264)
T ss_dssp             CCSSEETT
T ss_pred             ecCCcccC
Confidence            99998884

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.31  E-value=0.005  Score=57.13  Aligned_cols=81  Identities=14%  Similarity=0.102  Sum_probs=57.3

Q ss_pred             cCCcccccCceEEEEEEEcCCcEEEEEEec--CCCchhHHHHHHHHHHHHHhCC--CCCcceEEEEEEcCC----eEEEE
Q 048684          100 HENLIGQGGYAEVYKGQLEDGQFVAIKRLT--RGSPEEMTTDYLSELGIIVHVD--HPNIAKMIGYGVEGG----MHLIL  171 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~----~~lv~  171 (363)
                      ..+.|+.|.++.||+.... +..+++|+..  ..........+.+|+.++..+.  +..+.++++++.+..    .++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            4567899999999999875 4578888775  3321112346788999999997  456889999887653    78999


Q ss_pred             EccCCCChhh
Q 048684          172 ELSPHGSLAS  181 (363)
Q Consensus       172 E~~~~gsL~~  181 (363)
                      ||++|..+.+
T Consensus       121 e~v~G~~l~~  130 (359)
T 3dxp_A          121 EFVSGRVLWD  130 (359)
T ss_dssp             ECCCCBCCCC
T ss_pred             EecCCeecCC
Confidence            9999987743

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.84  E-value=0.01  Score=53.22  Aligned_cols=80  Identities=15%  Similarity=0.195  Sum_probs=57.6

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC---CCcceEEEEEEcCCeEEEEEc
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH---PNIAKMIGYGVEGGMHLILEL  173 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~lv~E~  173 (363)
                      .......+|.|..+.||+.+..+|+.|.||......... ...|..|+..|+.|.-   --+.+++++.   ..++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~-~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL-DGLFRAEALGLDWLGRSFGSPVPQVAGWD---DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC-TTHHHHHHHHHHHHTCSTTCCSCCEEEEE---TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch-hhHHHHHHHHHHHHHhhCCCCcceEEecc---CceEEEEe
Confidence            345567799999999999999999999999875443221 2457789999988842   1244555542   35799999


Q ss_pred             cCCCChh
Q 048684          174 SPHGSLA  180 (363)
Q Consensus       174 ~~~gsL~  180 (363)
                      ++++...
T Consensus        92 l~~~~~~   98 (288)
T 3f7w_A           92 VDERPPT   98 (288)
T ss_dssp             CCCCCCC
T ss_pred             ecccCCC
Confidence            9877543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.81  E-value=0.034  Score=52.24  Aligned_cols=77  Identities=14%  Similarity=0.089  Sum_probs=50.0

Q ss_pred             CCcccccCceEEEEEEEc-CCcEEEEEEecCCCc---h---hHHHHHHHHHHHHHhCCC--CCc-ceEEEEEEcCCeEEE
Q 048684          101 ENLIGQGGYAEVYKGQLE-DGQFVAIKRLTRGSP---E---EMTTDYLSELGIIVHVDH--PNI-AKMIGYGVEGGMHLI  170 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~~~---~---~~~~~~~~E~~~l~~l~H--~ni-v~l~~~~~~~~~~lv  170 (363)
                      .+.||.|.++.||++... ++..|+||.......   .   .....+..|..++..+..  |.. .+++.+ .....++|
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d~~~~~lv  113 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-DTEMAVTV  113 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-ETTTTEEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-cCCccEEE
Confidence            457999999999999743 468899998653211   0   112456788888887742  444 456654 34457899


Q ss_pred             EEccCCCC
Q 048684          171 LELSPHGS  178 (363)
Q Consensus       171 ~E~~~~gs  178 (363)
                      |||+++..
T Consensus       114 mE~l~g~~  121 (397)
T 2olc_A          114 MEDLSHLK  121 (397)
T ss_dssp             ECCCTTSE
T ss_pred             EEeCCCcc
Confidence            99998643

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.35  E-value=0.28  Score=44.55  Aligned_cols=75  Identities=21%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             cCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC---CCCcceEEEEEEcCC-eEEEEEccC
Q 048684          100 HENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD---HPNIAKMIGYGVEGG-MHLILELSP  175 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~-~~lv~E~~~  175 (363)
                      ..+.|+.|.+..+|+.... +..++||.....    ....|..|...|+.|.   ...+.++++++...+ .++||||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3456899999999998864 667888987532    2457889999888874   366888888876554 789999999


Q ss_pred             CCCh
Q 048684          176 HGSL  179 (363)
Q Consensus       176 ~gsL  179 (363)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9865

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.83  E-value=0.011  Score=57.14  Aligned_cols=63  Identities=13%  Similarity=0.140  Sum_probs=19.2

Q ss_pred             ccCCcccccCceEEEEEEEcC-CcEEEE------EEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Q 048684           99 SHENLIGQGGYAEVYKGQLED-GQFVAI------KRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE  164 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~-g~~vAv------K~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~  164 (363)
                      ...+.||   ||.||+|.+.. ..+|||      |...... ..+....|.+|..++..++|||+++.++|...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            3456676   99999998643 467888      7665433 22334678899999999999999999988654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=90.93  E-value=0.93  Score=39.48  Aligned_cols=76  Identities=11%  Similarity=0.069  Sum_probs=54.2

Q ss_pred             ccccCce-EEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGGYA-EVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~fg-~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      +..|..| .||+... .++..+++|.-...    ....+.+|..+|+.+. +--|.++++++.+.+ .++|||+++|.++
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            4445444 6998874 44667899986532    2456788999998885 333667888887766 7899999999877


Q ss_pred             hhhh
Q 048684          180 ASLL  183 (363)
Q Consensus       180 ~~~l  183 (363)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.14  E-value=0.79  Score=41.18  Aligned_cols=74  Identities=11%  Similarity=0.019  Sum_probs=54.0

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCC---CcceEEEEEEc--CCeEEEEEccC
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP---NIAKMIGYGVE--GGMHLILELSP  175 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~--~~~~lv~E~~~  175 (363)
                      ...++.|....||+.    |..++||....   ......+.+|+.+|..+.+.   .|.+++.++..  +..++||||++
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            345788888899988    45678887532   23356788999999999753   35667777652  33789999999


Q ss_pred             CCChhh
Q 048684          176 HGSLAS  181 (363)
Q Consensus       176 ~gsL~~  181 (363)
                      |..|.+
T Consensus        97 G~~l~~  102 (306)
T 3tdw_A           97 GQILGE  102 (306)
T ss_dssp             SEECHH
T ss_pred             CeECch
Confidence            988765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=86.89  E-value=0.59  Score=41.80  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=52.0

Q ss_pred             CCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCC--cceEEEEEEcCC----eEEEEEc
Q 048684          101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPN--IAKMIGYGVEGG----MHLILEL  173 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~----~~lv~E~  173 (363)
                      .+.++.|.+..||+..    ..+++|.....   .....+.+|+.+|..+. +..  +.+++.++....    .|+||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            4568999999999863    44888886432   33567889999998884 333  345555544333    4789999


Q ss_pred             cCCCChhh
Q 048684          174 SPHGSLAS  181 (363)
Q Consensus       174 ~~~gsL~~  181 (363)
                      ++|.+|.+
T Consensus        98 i~G~~l~~  105 (304)
T 3sg8_A           98 IKGVPLTP  105 (304)
T ss_dssp             CCCEECCH
T ss_pred             cCCeECCc
Confidence            99988764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=86.30  E-value=0.34  Score=44.43  Aligned_cols=81  Identities=9%  Similarity=-0.027  Sum_probs=55.5

Q ss_pred             Ccc-cccCceEEEEEEEc-------CCcEEEEEEecCCCc--hhHHHHHHHHHHHHHhCC-C--CCcceEEEEEEcCC--
Q 048684          102 NLI-GQGGYAEVYKGQLE-------DGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVD-H--PNIAKMIGYGVEGG--  166 (363)
Q Consensus       102 ~~l-G~G~fg~Vy~~~~~-------~g~~vAvK~~~~~~~--~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~--  166 (363)
                      +.| +.|..+.+|+....       +|..+++|.......  ......+.+|+.++..+. +  -.+.++++++.+..  
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            557 88889999998754       266788887653220  000135678888888874 3  35778888876652  


Q ss_pred             --eEEEEEccCCCChhhh
Q 048684          167 --MHLILELSPHGSLASL  182 (363)
Q Consensus       167 --~~lv~E~~~~gsL~~~  182 (363)
                        .++||||++|..+.+.
T Consensus       106 g~~~~v~e~l~G~~l~~~  123 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPDV  123 (357)
T ss_dssp             SSCEEEEECCCCBCCCBT
T ss_pred             CCceEEEEecCCCChhhc
Confidence              5899999998777643

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=82.52  E-value=0.34  Score=41.54  Aligned_cols=30  Identities=7%  Similarity=0.116  Sum_probs=20.0

Q ss_pred             CCCCchhhccCCCCccceEEechhHHHHHHh
Q 048684          205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIIT  235 (363)
Q Consensus       205 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt  235 (363)
                      .+.|||... ...+.+.=|||+|++||.-+-
T Consensus       102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          102 PPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -----CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            466888763 345678889999999999885

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=81.79  E-value=3.1  Score=37.26  Aligned_cols=73  Identities=21%  Similarity=0.248  Sum_probs=41.0

Q ss_pred             CcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-----CCCCcceEE-E--E-EEcCCeEEEEE
Q 048684          102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-----DHPNIAKMI-G--Y-GVEGGMHLILE  172 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~-~--~-~~~~~~~lv~E  172 (363)
                      ..|+.|..+.||+....+| .+++|.....  .   ..+..|+.++..+     ..|.++... |  + ...+..++||+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC--H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            3466677899999987655 4889988752  1   2333445555444     234444311 1  1 12344789999


Q ss_pred             ccCCCChh
Q 048684          173 LSPHGSLA  180 (363)
Q Consensus       173 ~~~~gsL~  180 (363)
                      |++|..+.
T Consensus       112 ~i~G~~~~  119 (346)
T 2q83_A          112 WIEGRPFE  119 (346)
T ss_dssp             CCCCBCCC
T ss_pred             eecCccCC
Confidence            99987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	363
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-31
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-29
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-28
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-27
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-27
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-26
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-25
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-24
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-24
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-23
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-23
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-20
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-09
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-14
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-08
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.002
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-04

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 3e-31
 Identities = 48/267 (17%), Positives = 92/267 (34%), Gaps = 67/267 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
              +    IG G +  V+ G   +   VAIK +  G+  E   D++ E  +++ + HP +
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKL 62

Query: 156 AKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKW---------------------- 192
            ++ G  +E   + L+ E   HG L+  L  +                            
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122

Query: 193 ------------THHIVSKI--------------------EGTFGYLPPEFFMHGIADEK 220
                         + V K+                    +    +  PE F       K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182

Query: 221 TDVYAYGVLLLEIITGRQAL---DSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA 277
           +DV+++GVL+ E+ +  +      S+ + +   S+   L  P L         T +  I 
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS-------THVYQIM 235

Query: 278 SACINQTSACRPQMSKVVQALRGDEEA 304
           + C  +    RP  S++++ L    E+
Sbjct: 236 NHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 7e-29
 Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 65/274 (23%)

Query: 80  KPGWKNFALSELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTD 139
           KP W++    E +   +       +G G + EV+ G       VA+K L +GS       
Sbjct: 1   KPWWED----EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DA 54

Query: 140 YLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSP------------------------ 175
           +L+E  ++  + H  + ++     +  +++I E                           
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114

Query: 176 -----------------HGSLAS---LLYAKW---LPDKWTHHIVSKIE--------GTF 204
                            H  L +   L+       + D     ++   E           
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 174

Query: 205 GYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDA 264
            +  PE   +G    K+DV+++G+LL EI+T  +       +  +  +++        D 
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234

Query: 265 YNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
              E    L  +   C  +    RP    +   L
Sbjct: 235 CPEE----LYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 5e-28
 Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 61/257 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
                   IG+G + +V  G    G  VA+K +     +     +L+E  ++  + H N+
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI---KNDATAQAFLAEASVMTQLRHSNL 62

Query: 156 AKMIGYGVE--GGMHLILELSPHGSLASLLYAKW---LPDKWTHHIVSKI---------- 200
            +++G  VE  GG++++ E    GSL   L ++    L           +          
Sbjct: 63  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 122

Query: 201 --------------------------------------EGTFGYLPPEFFMHGIADEKTD 222
                                                 +    +  PE         K+D
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 182

Query: 223 VYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN 282
           V+++G+LL EI +  +          +   +++       D         +  +   C +
Sbjct: 183 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA----VYEVMKNCWH 238

Query: 283 QTSACRPQMSKVVQALR 299
             +A RP   ++ + L 
Sbjct: 239 LDAAMRPSFLQLREQLE 255

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 1e-27
 Identities = 53/286 (18%), Positives = 97/286 (33%), Gaps = 73/286 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQ-----FVAIKRLTRGSPEEMTTDYLSELGIIVHV 150
              + + +IG G + EVYKG L+         VAIK L  G  E+   D+L E GI+   
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 151 DHPNIAKMIGYGVEGG-MHLILELSP---------------------------------- 175
            H NI ++ G   +   M +I E                                     
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 176 ------HGSLAS---LL------------YAKWLPDKWTH-HIVSKIEGTFGYLPPEFFM 213
                 H  LA+   L+             ++ L D     +  S  +    +  PE   
Sbjct: 127 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 186

Query: 214 HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL 273
           +      +DV+++G+++ E++T  +              + + ++         +  + +
Sbjct: 187 YRKFTSASDVWSFGIVMWEVMTYGERPYWELS----NHEVMKAINDGFRLPTPMDCPSAI 242

Query: 274 LLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQ 319
             +   C  Q  A RP+ + +V  L        ++I    SL+ L 
Sbjct: 243 YQLMMQCWQQERARRPKFADIVSILD-------KLIRAPDSLKTLA 281

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 5e-27
 Identities = 39/268 (14%), Positives = 85/268 (31%), Gaps = 59/268 (22%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
              +    IG G +  VYKG+      V +  +T  +P+++   + +E+G++    H NI
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNI 66

Query: 156 AKMIGYGVEGGMHLILELSPHGSLASLLYAKW--LPDKWTHHIVSKIEGTFGYLPPEFFM 213
              +GY     + ++ +     SL   L+             I  +      YL  +  +
Sbjct: 67  LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126

Query: 214 HG----------------IAD--------------------------------------- 218
           H                 I D                                       
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186

Query: 219 -EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA 277
             ++DVYA+G++L E++TG+    +      +   +             +     +  + 
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246

Query: 278 SACINQTSACRPQMSKVVQALRGDEEAL 305
           + C+ +    RP   +++ ++     +L
Sbjct: 247 AECLKKKRDERPLFPQILASIELLARSL 274

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 1e-26
 Identities = 44/291 (15%), Positives = 83/291 (28%), Gaps = 68/291 (23%)

Query: 91  LQAATDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           ++   D+F   + +G G    V+K      G  +A K +       +    + EL ++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW-LPDKWTHHIVSKI------- 200
            + P I    G     G + + +E    GSL  +L     +P++    +   +       
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120

Query: 201 -------------------------------------------EGTFGYLPPEFFMHGIA 217
                                                       GT  Y+ PE       
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY 180

Query: 218 DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA 277
             ++D+++ G+ L+E+  GR  +       +      ++      +    E   R     
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV------EGDAAETPPRPRTPG 234

Query: 278 SACINQTSACRPQMSKVVQALRGDEEALAQIIEENQSLRRLQRTFSEEFFD 328
               +     RP M+            L   I      +     FS EF D
Sbjct: 235 RPLSSYGMDSRPPMAIF---------ELLDYIVNEPPPKLPSGVFSLEFQD 276

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (253), Expect = 3e-25
 Identities = 53/303 (17%), Positives = 100/303 (33%), Gaps = 83/303 (27%)

Query: 86  FALSELQAATDNFSHE---------NLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGS 132
           F   +   A   F+ E          +IG G + EV  G L    +   FVAIK L  G 
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 133 PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSP---------------- 175
            E+   D+LSE  I+   DHPN+  + G   +   + +I E                   
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 176 ------------------------HGSLAS---LL------------YAKWLPDKWTHHI 196
                                   H  LA+   L+             +++L D  +   
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186

Query: 197 VSK---IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSM 253
            +     +    +  PE   +      +DV++YG+++ E+++  +       +      +
Sbjct: 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN----QDV 242

Query: 254 KELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEENQ 313
              ++         +  + L  +   C  +    RP+  ++V  L        ++I    
Sbjct: 243 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD-------KMIRNPN 295

Query: 314 SLR 316
           SL+
Sbjct: 296 SLK 298

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 3e-24
 Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 69/306 (22%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQF----VAIKRLTRGSPEEMTTDYLSELGIIVHV 150
             F    ++G G +  VYKG  + +G+     VAIK L   +  +   + L E  ++  V
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 151 DHPNIAKMIGYGVEGGMHLILELSP----------------------------------- 175
           D+P++ +++G  +   + LI +L P                                   
Sbjct: 69  DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128

Query: 176 -----HGSLAS---------------LLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG 215
                H  LA+                  AK L  +   +     +    ++  E  +H 
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188

Query: 216 IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL 275
           I   ++DV++YGV + E++T          +  + S +++            +    + +
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID----VYM 244

Query: 276 IASACINQTSACRPQMSKVVQAL----RGDEEALAQIIEENQSLRR-LQRTFSEEFFDAE 330
           I   C    +  RP+  +++       R  +  L    +E   L       F     D E
Sbjct: 245 IMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEE 304

Query: 331 EFNSAS 336
           + +   
Sbjct: 305 DMDDVV 310

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 4e-24
 Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 64/283 (22%)

Query: 90  ELQAATDNFSHENL-IGQGGYAEVYKGQL---EDGQFVAIKRLTRGSPEEMTTDYLSELG 145
           +L    DN    ++ +G G +  V +G     +    VAIK L +G+ +  T + + E  
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61

Query: 146 IIVHVDHPNIAKMIGYG-----------VEGGMHLILELSPHGSLASLLYAKWL------ 188
           I+  +D+P I ++IG               GG      +     +     A+ L      
Sbjct: 62  IMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 121

Query: 189 ---------------------------------------PDKWTHHIVSKIEGTFGYLPP 209
                                                   D   +   S  +    +  P
Sbjct: 122 MKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 181

Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ 269
           E         ++DV++YGV + E ++  Q      K   + + +++            E 
Sbjct: 182 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE- 240

Query: 270 LTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQIIEEN 312
              L  + S C       RP    V Q +R    +LA  +E +
Sbjct: 241 ---LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 280

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 7e-24
 Identities = 47/277 (16%), Positives = 88/277 (31%), Gaps = 69/277 (24%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD 151
           +       IG+G + +V++G           VAIK     + + +   +L E   +   D
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 152 HPNIAKMIGYGVEGGMHLILELSPHGSLASLLY------------------AKWLPDKWT 193
           HP+I K+IG   E  + +I+EL   G L S L                   +  L    +
Sbjct: 67  HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126

Query: 194 HHIV------------------------------------SKIEGTFGYLPPEFFMHGIA 217
              V                                    SK +    ++ PE       
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186

Query: 218 DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA 277
              +DV+ +GV + EI+          K+  +   ++      +           L  + 
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT----LYSLM 242

Query: 278 SACINQTSACRPQMSKVVQALRGDEEALAQIIEENQS 314
           + C     + RP+ +++   L         I+EE ++
Sbjct: 243 TKCWAYDPSRRPRFTELKAQLS-------TILEEEKA 272

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 1e-23
 Identities = 42/258 (16%), Positives = 83/258 (32%), Gaps = 63/258 (24%)

Query: 101 ENLIGQGGYAEVYKGQLED---GQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIA 156
           +  +G G +  V KG  +     + VA+K L   +    +  + L+E  ++  +D+P I 
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 157 KMIGYGVEGGMHLILELSP---------------------------------------HG 177
           +MIG        L++E++                                        H 
Sbjct: 72  RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131

Query: 178 SLASLLY---------------AKWLPDKWTHHIVSK-IEGTFGYLPPEFFMHGIADEKT 221
            LA+                  +K L     ++      +    +  PE   +     K+
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 191

Query: 222 DVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI 281
           DV+++GVL+ E  +  Q      K   + + +++            E    +  + + C 
Sbjct: 192 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE----MYDLMNLCW 247

Query: 282 NQTSACRPQMSKVVQALR 299
                 RP  + V   LR
Sbjct: 248 TYDVENRPGFAAVELRLR 265

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 2e-23
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 63/259 (24%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNI 155
           ++   E  +GQG + EV+ G       VAIK L  G+       +L E  ++  + H  +
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKL 74

Query: 156 AKMIGYG-----------VEGGMHLILELSPHGS-------------------------- 178
            ++               +  G  L       G                           
Sbjct: 75  VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134

Query: 179 -------------------LASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADE 219
                              +A    A+ + D   +      +    +  PE  ++G    
Sbjct: 135 VHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTI 193

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
           K+DV+++G+LL E+ T  +       +  +   ++                  L  +   
Sbjct: 194 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES----LHDLMCQ 249

Query: 280 CINQTSACRPQMSKVVQAL 298
           C  +    RP    +   L
Sbjct: 250 CWRKEPEERPTFEYLQAFL 268

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.5 bits (237), Expect = 6e-23
 Identities = 47/295 (15%), Positives = 103/295 (34%), Gaps = 67/295 (22%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            D +   +++G G ++EV   +     + VAIK + + + E       +E+ ++  + HP
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK--------------------WLPDKW 192
           NI  +      GG ++LI++L   G L   +  K                    +L D  
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127

Query: 193 THHI------------------------VSKIE----------GTFGYLPPEFFMHGIAD 218
             H                         +SK+E          GT GY+ PE        
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYS 187

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS 278
           +  D ++ GV+   ++ G         + +    +K   +       +     +  +   
Sbjct: 188 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI--R 245

Query: 279 ACINQTSACRPQMSKVVQA--LRGD-------EEALAQIIEENQSLRRLQRTFSE 324
             + +    R    + +Q   + GD        +++++ I++N +  + ++ F+ 
Sbjct: 246 HLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNA 300

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.0 bits (228), Expect = 8e-22
 Identities = 40/257 (15%), Positives = 83/257 (32%), Gaps = 59/257 (22%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVD 151
              FS    IG G +  VY  + + + + VAIK+++       E   D + E+  +  + 
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLA-SLLYAKWLPDKWTHHIVSKI--------- 200
           HPN  +  G  +      L++E     +     ++ K L +     +             
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133

Query: 201 --------------------------------------EGTFGYLPPEFFM---HGIADE 219
                                                  GT  ++ PE  +    G  D 
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDG 193

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
           K DV++ G+  +E+   +  L +      ++   +    P L   + +E     +    +
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFRNFV---DS 249

Query: 280 CINQTSACRPQMSKVVQ 296
           C+ +    RP    +++
Sbjct: 250 CLQKIPQDRPTSEVLLK 266

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (224), Expect = 2e-21
 Identities = 50/276 (18%), Positives = 96/276 (34%), Gaps = 65/276 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLED-GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            + + ++ +G G Y EVY+G  +     VA+K L   + E    ++L E  ++  + HPN
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 74

Query: 155 IAKMIGYGVEGG-MHLILELSP-------------------------------------- 175
           + +++G        ++I E                                         
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 176 ---HGSLAS---LLYAKWLP-----------DKWTHHIVSKIEGTFGYLPPEFFMHGIAD 218
              H  LA+   L+    L               T+   +  +    +  PE   +    
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS 278
            K+DV+A+GVLL EI T   +           S + EL++             ++  +  
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLEKDYRMERPEGCPEKVYELMR 250

Query: 279 ACINQTSACRPQMSKVVQALRG--DEEALAQIIEEN 312
           AC     + RP  +++ QA      E +++  +E+ 
Sbjct: 251 ACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 286

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 3e-21
 Identities = 33/260 (12%), Positives = 82/260 (31%), Gaps = 63/260 (24%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN- 154
            + +    +G G +  V  G+      VAIK +  GS  E   +++ E  +++++ H   
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKL 61

Query: 155 -------------------------------------------IAKMIGYGVEGGMH--- 168
                                                      + K +   +E       
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121

Query: 169 ---------LILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADE 219
                     ++       ++    ++++ D      V   +    + PPE  M+     
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-SKFPVRWSPPEVLMYSKFSS 180

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
           K+D++A+GVL+ EI +  +       +      + + +        + +    +  I  +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK----VYTIMYS 236

Query: 280 CINQTSACRPQMSKVVQALR 299
           C ++ +  RP    ++  + 
Sbjct: 237 CWHEKADERPTFKILLSNIL 256

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 4e-21
 Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 60/255 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH 152
           ++F     +G+G +  VY  +  +    +A+K L +       +      E+ I  H+ H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKI---------- 200
           PNI ++ GY  +   ++LILE +P G++   L       ++ T   ++++          
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125

Query: 201 ---------------------------------------EGTFGYLPPEFFMHGIADEKT 221
                                                   GT  YLPPE     + DEK 
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 185

Query: 222 DVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI 281
           D+++ GVL  E + G+   +++          +  V+ T  D   TE    L+   S  +
Sbjct: 186 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFV-TEGARDLI---SRLL 239

Query: 282 NQTSACRPQMSKVVQ 296
               + RP + +V++
Sbjct: 240 KHNPSQRPMLREVLE 254

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 7e-21
 Identities = 33/255 (12%), Positives = 76/255 (29%), Gaps = 57/255 (22%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              ++    IGQG    VY    +  GQ VAI+++      +     ++E+ ++    +P
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNP 77

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL----- 207
           NI   +   + G  + +++E    GSL  ++    + +     +  +      +L     
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137

Query: 208 ----------------------------------------------PPEFFMHGIADEKT 221
                                                          PE         K 
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197

Query: 222 DVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI 281
           D+++ G++ +E+I G     +      ++                +      L   + C+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL---NRCL 254

Query: 282 NQTSACRPQMSKVVQ 296
           +     R    +++Q
Sbjct: 255 DMDVEKRGSAKELLQ 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 3e-20
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 60/258 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           +++     +G+G Y EV         + VA+K +      +   +   E+ I   ++H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 155 I---------------------------------------AKMIGYGVEGGMHLI----- 170
           +                                       A+   + +  G+  +     
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124

Query: 171 ---------LELSPHGS--LASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHG-IAD 218
                    L L    +  ++    A          +++K+ GT  Y+ PE         
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS 278
           E  DV++ G++L  ++ G    D    S   +S  KE                 LL    
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL---H 241

Query: 279 ACINQTSACRPQMSKVVQ 296
             + +  + R  +  + +
Sbjct: 242 KILVENPSARITIPDIKK 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 5e-20
 Identities = 46/256 (17%), Positives = 79/256 (30%), Gaps = 64/256 (25%)

Query: 101 ENLIGQGGYAEVYKGQL-EDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHPNIAKM 158
           +  IG+G +  VYKG   E    VA   L  R   +     +  E  ++  + HPNI + 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 159 IGYGV-----EGGMHLILELSPHGSLASLLYAKW-LPDKWTHHIVSKIEGTFGYL----- 207
                     +  + L+ EL   G+L + L     +  K       +I     +L     
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTP 133

Query: 208 -----------------------------------------------PPEFFMHGIADEK 220
                                                           PE +     DE 
Sbjct: 134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKY-DES 192

Query: 221 TDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC 280
            DVYA+G+ +LE+ T        Q +  ++  +   V P   D     ++  ++     C
Sbjct: 193 VDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII---EGC 249

Query: 281 INQTSACRPQMSKVVQ 296
           I Q    R  +  ++ 
Sbjct: 250 IRQNKDERYSIKDLLN 265

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 4e-18
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 57/199 (28%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG---SPEEMTTDYLSELGIIVHVD 151
           ++F    ++G+G + +V+  +  +  QF AIK L +      +++    + +  + +  +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK------------------------ 186
           HP +  M         +  ++E    G L   + +                         
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121

Query: 187 ------------WLPDKWTHHIVS----------------KIEGTFGYLPPEFFMHGIAD 218
                        L DK  H  ++                   GT  Y+ PE  +    +
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN 181

Query: 219 EKTDVYAYGVLLLEIITGR 237
              D +++GVLL E++ G+
Sbjct: 182 HSVDWWSFGVLLYEMLIGQ 200

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 1e-17
 Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 67/267 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLE----DGQFVAIKRLTRG--SPEEMTTDYLSELGIIVH 149
            +      +G G +  V +G+ +        VA+K L     S  E   D++ E+  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 150 VDHPNI---------------------------------------AKMIGYGVEGGMHLI 170
           +DH N+                                              V  GM  +
Sbjct: 68  LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 171 LELS-PHGSLAS---LL------------YAKWLPDKWTHHIVSK-IEGTFGYLPPEFFM 213
                 H  LA+   LL              + LP    H+++ +  +  F +  PE   
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 214 HGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR 272
                  +D + +GV L E+ T G++       S ++    KE       +    +    
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD---- 243

Query: 273 LLLIASACINQTSACRPQMSKVVQALR 299
           +  +   C       RP    +   L 
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 3e-17
 Identities = 44/262 (16%), Positives = 83/262 (31%), Gaps = 64/262 (24%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
            D +     +G G + +VYK Q  E     A K +   S EE+  DY+ E+ I+   DHP
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-EDYMVEIDILASCDHP 69

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLLYA--KWLPDKWTHHIVSKIEGTFGYLPPE 210
           NI K++        + +++E    G++ +++    + L +     +  +      YL   
Sbjct: 70  NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129

Query: 211 FFMHG----------------IAD------------------------------------ 218
             +H                 +AD                                    
Sbjct: 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 189

Query: 219 ----EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL 274
                K DV++ G+ L+E+              V+    K         +  +      L
Sbjct: 190 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 249

Query: 275 LIASACINQTSACRPQMSKVVQ 296
                C+ +    R   S+++Q
Sbjct: 250 ---KKCLEKNVDARWTTSQLLQ 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 4e-17
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 11/134 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           +  S    +G G + +V +         +    VA+K L   +        +SEL ++ +
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 150 V-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
           + +H NI  ++G    GG   +I E   +G L + L  K      +    + +E     L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 208 PPE---FFMHGIAD 218
             E    F + +A 
Sbjct: 143 DLEDLLSFSYQVAK 156

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 5e-11
 Identities = 16/117 (13%), Positives = 42/117 (35%), Gaps = 3/117 (2%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ 244
           A+ + +   + +         ++ PE   + +   ++DV++YG+ L E+ +   +     
Sbjct: 192 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251

Query: 245 KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD 301
               + S   +++               +  I   C +     RP   ++VQ +   
Sbjct: 252 P---VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 78.2 bits (192), Expect = 9e-17
 Identities = 40/311 (12%), Positives = 96/311 (30%), Gaps = 62/311 (19%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           D +     +G G +  V++      G+    K +    P +  T   +E+ I+  + HP 
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT-VKNEISIMNQLHHPK 87

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLLYAK--WLPDKWTHHIVSKIEGTFGYLPPEF 211
           +  +     +   M LILE    G L   + A+   + +    + + +      ++    
Sbjct: 88  LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 147

Query: 212 FMH-----------------------GIA-----------------------------DE 219
            +H                       G+A                               
Sbjct: 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 207

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
            TD++A GVL   +++G            + +  +   +       +     +  +    
Sbjct: 208 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI--KN 265

Query: 280 CINQTSACRPQMSKVVQA--LRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASL 337
            + +    R  +   ++   L+GD   L   I  ++   ++++   E++ D      A  
Sbjct: 266 LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSR-YNKIRQKIKEKYADWPAPQPAIG 324

Query: 338 NELDVNDINRH 348
              + + + +H
Sbjct: 325 RIANFSSLRKH 335

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.5 bits (190), Expect = 2e-16
 Identities = 40/204 (19%), Positives = 68/204 (33%), Gaps = 58/204 (28%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-----EEMTTDYLSELGIIVH 149
           ++FS   +IG+GG+ EVY  +  + G+  A+K L +        E +  +    L ++  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD-----KWTHHIVSKIE-- 201
            D P I  M         +  IL+L   G L   L    +        +   I+  +E  
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123

Query: 202 -------------------------------------------GTFGYLPPEFFMHGIA- 217
                                                      GT GY+ PE    G+A 
Sbjct: 124 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 183

Query: 218 DEKTDVYAYGVLLLEIITGRQALD 241
           D   D ++ G +L +++ G     
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFR 207

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 58/222 (26%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL--TRGSPEEMTTDYLSELGIIVHVDH 152
           ++F    ++G+G ++ V   + L   +  AIK L       E        E  ++  +DH
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGTFGYLPPE 210
           P   K+     +   ++  L  + +G L   +       +  T    ++I     YL  +
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127

Query: 211 FFMH---------------------GIA-------------------------------- 217
             +H                     G A                                
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 187

Query: 218 DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP 259
            + +D++A G ++ +++ G     +  + L+    +K   D 
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 2e-16
 Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 57/222 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHP 153
           +NF     IG+G Y  VYK +    G+ VA+K++   +  E + +  + E+ ++  ++HP
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 154 NIAKMIGYGVEGGMHLILELSPHGSLASLLYAKW-------------------LPDKWTH 194
           NI K++          ++    H  L   + A                     L    +H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 195 HIV------------------------------------SKIEGTFGYLPPEFFMHGIAD 218
            ++                                     ++   +   P          
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
              D+++ G +  E++T R       +   ++   + L  P 
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.4 bits (187), Expect = 3e-16
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 85  NFALSELQAATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTT 138
           N  L  L+   +N  +   IG+G +  V++ +       E    VA+K L   +  +M  
Sbjct: 2   NPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 61

Query: 139 DYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK 186
           D+  E  ++   D+PNI K++G    G  M L+ E   +G L   L + 
Sbjct: 62  DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM 110

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 4/115 (3%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQ 244
           ++ +     +           ++PPE   +     ++DV+AYGV+L EI +         
Sbjct: 187 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 246

Query: 245 KSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
               +   +++       +    E    L  +   C ++  A RP    + + L+
Sbjct: 247 AHEEVIYYVRDGNILACPENCPLE----LYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 3e-16
 Identities = 41/256 (16%), Positives = 70/256 (27%), Gaps = 59/256 (23%)

Query: 102 NLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDY----LSELGIIVHVDHPNIA 156
           + +G+G +A VYK +     Q VAIK++  G   E         L E+ ++  + HPNI 
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 157 KMIGYGVEGG-MHLILELSPHGSLAS--------------------LLYAKWLPDKWTHH 195
            ++        + L+ +                             L   ++L   W  H
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123

Query: 196 IVSKIE--------------------------------GTFGYLPPEFFM-HGIADEKTD 222
              K                                   T  Y  PE      +     D
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVD 183

Query: 223 VYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN 282
           ++A G +L E++     L        +    + L  PT     +   L   +   S    
Sbjct: 184 MWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI 243

Query: 283 QTSACRPQMSKVVQAL 298
                       +  L
Sbjct: 244 PLHHIFSAAGDDLLDL 259

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.2 bits (184), Expect = 4e-16
 Identities = 42/270 (15%), Positives = 81/270 (30%), Gaps = 68/270 (25%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVD 151
           +D +    ++G GG +EV+  + L   + VA+K L             +  E      ++
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 152 HPNI-------------------------------------------AKMIGYGVEGGMH 168
           HP I                                           A  +       ++
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125

Query: 169 LILE-------LSP---------HGSLASLLYAKWLPDKWTHHIVSK-IEGTFGYLPPEF 211
              +       + P            +     A+ + D       +  + GT  YL PE 
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185

Query: 212 FMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYN-TEQL 270
                 D ++DVY+ G +L E++TG           V +  ++E   P        +  L
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL 245

Query: 271 TRLLLIASACINQTSACRPQ-MSKVVQALR 299
             ++L     + +    R Q  +++   L 
Sbjct: 246 DAVVL---KALAKNPENRYQTAAEMRADLV 272

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.5 bits (185), Expect = 5e-16
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 53/195 (27%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH 152
            +F     +G G +  V+  +   +G++ A+K L +      +       E  ++  V H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLY-----------------AKWLPDKWTH 194
           P I +M G   +   + +I++    G L SLL                     L    + 
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123

Query: 195 HIV--------------------------------SKIEGTFGYLPPEFFMHGIADEKTD 222
            I+                                  + GT  Y+ PE       ++  D
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID 183

Query: 223 VYAYGVLLLEIITGR 237
            +++G+L+ E++ G 
Sbjct: 184 WWSFGILIYEMLAGY 198

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 6e-16
 Identities = 26/257 (10%), Positives = 65/257 (25%), Gaps = 60/257 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           + +     +G+G +  V++       +    K +     +++      E+ I+    H N
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV--KKEISILNIARHRN 62

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLP------------------------ 189
           I  +         + +I E      +   +                              
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122

Query: 190 ----DKWTHHIV--------------------------SKIEGTFGYLPPEFFMHGIADE 219
               D    +I+                            +     Y  PE   H +   
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
            TD+++ G L+  +++G     +     ++ + M                     +    
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV--DR 240

Query: 280 CINQTSACRPQMSKVVQ 296
            + +    R   S+ +Q
Sbjct: 241 LLVKERKSRMTASEALQ 257

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 1e-15
 Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 10/122 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHP 153
           +++     IG G Y    K +   DG+ +  K L  GS  E      +SE+ ++  + HP
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 154 NIAKMIGYGVE---GGMHLILELSPHGSLASLLYA-----KWLPDKWTHHIVSKIEGTFG 205
           NI +     ++     +++++E    G LAS++       ++L +++   +++++     
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 206 YL 207
             
Sbjct: 124 EC 125

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 195 HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMK 254
                  GT  Y+ PE       +EK+D+++ G LL E+        +  +  +    ++
Sbjct: 169 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-KIR 227

Query: 255 ELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
           E     +   Y+ E    L  I +  +N     RP + ++++
Sbjct: 228 EGKFRRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEILE 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 1e-15
 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHV-D 151
           ++   +++IG+G + +V K +++        AIKR+   + ++   D+  EL ++  +  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 152 HPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPE 210
           HPNI  ++G     G ++L +E +PHG+L   L    + +  T    +    T   L  +
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE--TDPAFAIANSTASTLSSQ 127

Query: 211 FFMHGIAD 218
             +H  AD
Sbjct: 128 QLLHFAAD 135

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 5e-10
 Identities = 20/137 (14%), Positives = 52/137 (37%), Gaps = 13/137 (9%)

Query: 190 DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVM 249
            +  +   +       ++  E   + +    +DV++YGVLL EI++             +
Sbjct: 176 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 235

Query: 250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGDEEALAQII 309
           +  + +          + E    +  +   C  +    RP  ++++ +L        +++
Sbjct: 236 YEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPSFAQILVSLN-------RML 284

Query: 310 EENQSLRRLQRTFSEEF 326
           EE ++   +  T  E+F
Sbjct: 285 EERKTY--VNTTLYEKF 299

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 2e-15
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 101 ENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIA 156
             +IG+G +  VY G L D        A+K L R +     + +L+E  I+    HPN+ 
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 157 KMIGYGV--EGGMHLILELSPHGSLASLLYAKWLPDKWTHHI 196
            ++G  +  EG   ++L    HG L + +  +         I
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 5e-12
 Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 179 LASLLYAKWLPDKW--THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG 236
           +A    A+ + DK   + H  +  +    ++  E         K+DV+++GVLL E++T 
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230

Query: 237 RQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
                    +  +   + +       + Y  + L  ++L    C +  +  RP  S++V 
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPE-YCPDPLYEVML---KCWHPKAEMRPSFSELVS 286

Query: 297 ALRGDEEALAQIIEEN 312
            +       +  I E+
Sbjct: 287 RI---SAIFSTFIGEH 299

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 72.4 bits (177), Expect = 8e-15
 Identities = 25/257 (9%), Positives = 69/257 (26%), Gaps = 59/257 (22%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           D++     +G G +  V++      G   A K +      +  T    E+  +  + HP 
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPT 84

Query: 155 IAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW--LPDKWTHHIVSKIEGTFGYLPPEF 211
           +  +     +   M +I E    G L   +  +   + +      + ++     ++    
Sbjct: 85  LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 144

Query: 212 FMH-----------------------GIA-----------------------------DE 219
           ++H                       G+                                
Sbjct: 145 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGY 204

Query: 220 KTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA 279
            TD+++ GVL   +++G            + +      +          +  +  +    
Sbjct: 205 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI--RK 262

Query: 280 CINQTSACRPQMSKVVQ 296
            +      R  + + ++
Sbjct: 263 LLLADPNTRMTIHQALE 279

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-14
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           +  +    +GQG +  VY+G        E    VAIK +   +      ++L+E  ++  
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW 187
            +  ++ +++G   +G    +I+EL   G L S L +  
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 118

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 5e-10
 Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 4/125 (3%)

Query: 179 LASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ 238
           +      + + +   +    K      ++ PE    G+    +DV+++GV+L EI T  +
Sbjct: 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 233

Query: 239 ALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
                  +  +   + E       D         L  +   C       RP   +++ ++
Sbjct: 234 QPYQGLSNEQVLRFVMEGGLLDKPDNCPDM----LFELMRMCWQYNPKMRPSFLEIISSI 289

Query: 299 RGDEE 303
           + + E
Sbjct: 290 KEEME 294

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 1e-14
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 16/139 (11%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLED------GQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           +N     ++G G + +V                VA+K L   +        +SEL ++  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 150 V-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLP-----DKWTHHIVSKIEG 202
           +  H NI  ++G     G ++LI E   +G L + L +K         ++ +    + E 
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 203 TFGYLPPE---FFMHGIAD 218
               L  E    F + +A 
Sbjct: 157 DLNVLTFEDLLCFAYQVAK 175

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 185 AKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSS 243
           A+ +     + +         ++ PE    GI   K+DV++YG+LL EI + G       
Sbjct: 211 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270

Query: 244 QKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQAL 298
                 +  ++             E    + +I  +C    S  RP    +   L
Sbjct: 271 PVDANFYKLIQNGFKMDQPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 2e-14
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 101 ENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG 160
           +  IG+G + EV++G+   G+ VA+K  +  S EE +    +E+   V + H NI   I 
Sbjct: 8   QESIGKGRFGEVWRGKW-RGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIA 64

Query: 161 YGVEGG-----MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
              +       + L+ +   HGSL   L    +  +    +         +L
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 116

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-09
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 193 THHIVSKIEGTFGYLPPEFF------MHGIADEKTDVYAYGVLLLEIITGRQALDSSQKS 246
                +   GT  Y+ PE         H  + ++ D+YA G++  EI          +  
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224

Query: 247 LVMWSSM---------------KELVDPTLGDAYNTEQLTRLLL-IASACINQTSACRPQ 290
            + +  +               ++ + P + + + + +  R++  I   C     A R  
Sbjct: 225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284

Query: 291 MSKVVQALR 299
             ++ + L 
Sbjct: 285 ALRIKKTLS 293

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 3e-14
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 6/126 (4%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHP 153
              +++ + IG+G Y  V       +   VAIK+++    +      L E+ I++   H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 154 NIAKMIGYGVEGGMH-----LILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLP 208
           NI  +        +       ++       L  LL  + L +    + + +I     Y+ 
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 209 PEFFMH 214
               +H
Sbjct: 127 SANVLH 132

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 6e-04
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 189 PDKWTHHIVSKIEGTFGYLPPEFFMHGIAD-EKTDVYAYGVLLLEIITGRQALDSSQKSL 247
           PD      +++   T  Y  PE  ++     +  D+++ G +L E+++ R          
Sbjct: 161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 248 VMWSSMKELVDPTLGD 263
            +   +  L  P+  D
Sbjct: 221 QLNHILGILGSPSQED 236

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.9 bits (170), Expect = 3e-14
 Identities = 31/232 (13%), Positives = 66/232 (28%), Gaps = 55/232 (23%)

Query: 96  DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHPN 154
           + +     IG+G Y  VYK Q   G+  A+K++      E + +  + E+ I+  + H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 155 IAKMIGYGVEGGMHLILELSPHGSLASLLYAKW------------------LPDKWTHHI 196
           I K+          +++       L  LL                      +       +
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121

Query: 197 V------------------------------------SKIEGTFGYLPPEFFMHGIADEK 220
           +                                     +I   +   P            
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181

Query: 221 TDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR 272
            D+++ G +  E++ G        ++  +    + L  P   +  N  +L +
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 4e-14
 Identities = 38/243 (15%), Positives = 73/243 (30%), Gaps = 64/243 (26%)

Query: 94  ATDNFSHENLIGQGGYAEVYKGQ--LEDGQFVAIKRLTRGSPEE-MTTDYLSELGIIVH- 149
           A   +     IG+G Y +V+K +     G+FVA+KR+   + EE M    + E+ ++ H 
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 150 --VDHPNIAKMIGYGVE-----------------GGMHLILELSPHGSL----------- 179
              +HPN+ ++                         +   L+  P   +           
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 180 --------------------ASLLYAKWLPDKWTHHIVSKIE----------GTFGYLPP 209
                                ++L       K     +++I            T  Y  P
Sbjct: 125 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 184

Query: 210 EFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ 269
           E  +        D+++ G +  E+   +     S     +   +  +  P   D      
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244

Query: 270 LTR 272
           L R
Sbjct: 245 LPR 247

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 69.3 bits (169), Expect = 5e-14
 Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 70/269 (26%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--------EEMTTDYLSELGI 146
           +N+  + ++G+G  + V +       +  A+K +             +E+    L E+ I
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 147 IVHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW-LPDKWTHHIV------ 197
           +  V  HPNI ++           L+ +L   G L   L  K  L +K T  I+      
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122

Query: 198 --------------------------------------------SKIEGTFGYLPPEFFM 213
                                                        ++ GT  YL PE   
Sbjct: 123 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 182

Query: 214 ------HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT 267
                 H    ++ D+++ GV++  ++ G       ++ L++   M         +  + 
Sbjct: 183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 242

Query: 268 EQLTRLLLIASACINQTSACRPQMSKVVQ 296
               + L+  S  +      R    + + 
Sbjct: 243 SDTVKDLV--SRFLVVQPQKRYTAEEALA 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 6e-14
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 56/198 (28%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP--EEMTTDYLSELGIIVHVDH 152
           ++F +  L+G+G + +V   +    G++ A+K L +     ++     ++E  ++ +  H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 153 PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW-LPDKWTHHIVSKI---------- 200
           P +  +         +  ++E +  G L   L  +    ++      ++I          
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 201 -----------------------------------------EGTFGYLPPEFFMHGIADE 219
                                                     GT  YL PE         
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184

Query: 220 KTDVYAYGVLLLEIITGR 237
             D +  GV++ E++ GR
Sbjct: 185 AVDWWGLGVVMYEMMCGR 202

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-13
 Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL--------EDGQFVAIKRLTRGSPEEMTTDYLSELGII 147
           D       +G+G + +V   +              VA+K L   + E+  +D +SE+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 148 VHV-DHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKWLPD-KWTHHIVSKIEGTF 204
             +  H NI  ++G   + G +++I+E +  G+L   L A+  P  +++++     E   
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 205 GYLPPEFFMHGIA 217
                    + +A
Sbjct: 133 SSKDLVSCAYQVA 145

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 8e-11
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 4/123 (3%)

Query: 176 HGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT 235
              +A    A+ +     +   +       ++ PE     I   ++DV+++GVLL EI T
Sbjct: 173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

Query: 236 GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVV 295
              +         ++  +KE            E    L ++   C +   + RP   ++V
Sbjct: 233 LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLV 288

Query: 296 QAL 298
           + L
Sbjct: 289 EDL 291

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 8e-13
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 69/229 (30%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            +++   +IG G +  VY+ +L + G+ VAIK++ +    +       EL I+  +DH N
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCN 74

Query: 155 IAKMIGYGVEGG-------MHLILELSPHGSLASLLY----AKWLPDKWTHHIVSKIEGT 203
           I ++  +    G       ++L+L+  P        +     + LP  +    + ++  +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134

Query: 204 FGYLPPEFFMH----------------------GIA------------------------ 217
             Y+      H                      G A                        
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194

Query: 218 ------DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
                     DV++ G +L E++ G+           +   +K L  PT
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 2e-12
 Identities = 36/256 (14%), Positives = 77/256 (30%), Gaps = 74/256 (28%)

Query: 103 LIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEM-----TTDYLSELGIIVHVD--HPN 154
           L+G GG+  VY G  + D   VAIK + +    +       T    E+ ++  V      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 155 IAKMIGYG------------VEGGMHLILELSPHGSLASLLYAKW-------LPDKWTHH 195
           + +++ +              E    L   ++  G+L   L   +       +       
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130

Query: 196 IV----------------------------------SKIEGTFGYLPPEFFM-HGIADEK 220
           ++                                  +  +GT  Y PPE+   H      
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190

Query: 221 TDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC 280
             V++ G+LL +++ G    +  ++ +      ++ V                  +   C
Sbjct: 191 AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH------------LIRWC 238

Query: 281 INQTSACRPQMSKVVQ 296
           +    + RP   ++  
Sbjct: 239 LALRPSDRPTFEEIQN 254

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-12
 Identities = 33/222 (14%), Positives = 58/222 (26%), Gaps = 57/222 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTR-GSPEEMTTDYLSELGIIVHVDHP 153
             +     +G G Y  V        G  VAIK+L R    E        EL ++ H+ H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 154 NIAKMIGYGVEGG-----MHLILELSPHGSLAS--------------------LLYAKWL 188
           N+  ++                L +   G+                       L   +++
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137

Query: 189 PDKWTHHIVSK------------------------------IEGTFGYLPPEFFMHGIAD 218
                 H   K                              +   +   P          
Sbjct: 138 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT 197

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
           +  D+++ G ++ E+ITG+     S     +   MK    P 
Sbjct: 198 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 3e-12
 Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 57/223 (25%)

Query: 95  TDNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDH 152
            + + + + +G G Y  V      + G  VA+K+L+R             EL ++ H+ H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 153 PNIAKMIGYGVEG-----GMHLILELSPHGSLAS--------------------LLYAKW 187
            N+  ++              + L     G+  +                    L   K+
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136

Query: 188 LPDKWTHHIVSKIE------------------------------GTFGYLPPEFFMHGIA 217
           +      H   K                                  +   P         
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 196

Query: 218 DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
           ++  D+++ G ++ E++TGR     +     +   ++ +  P 
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 4e-12
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEE-----MTTDYLSELGIIVH 149
           D +     +G G +A V K +    G   A K + +   +         D   E+ I+  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 150 VDHPNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK-WLPDKWTHHIVSKI 200
           + HPN+  +         + LILEL   G L   L  K  L ++     + +I
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 5e-06
 Identities = 14/95 (14%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL 261
           GT  ++ PE   +     + D+++ GV+   +++G        K   + +      +   
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237

Query: 262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQ 296
               NT  L +  +     + +    R  +   +Q
Sbjct: 238 EYFSNTSALAKDFI--RRLLVKDPKKRMTIQDSLQ 270

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 3e-11
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRL-TRGSPEEMTTDYLSELGIIVHVDHP 153
             +     IGQG + EV+K +  + GQ VA+K++      E      L E+ I+  + H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 154 NIAKMIGYGV---------EGGMHLILELSPHGSLASLLYA-KWLPDKWTHHIVSKIEGT 203
           N+  +I             +G ++L+ +   H     L              ++  +   
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 204 FGYLPPEFFMH 214
             Y+     +H
Sbjct: 130 LYYIHRNKILH 140

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 4e-11
 Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 96  DNFSHENLIGQGGYAEVYKG------QLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVH 149
           D       +G+G + +V +       +    + VA+K L  G+        +SEL I++H
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 150 -VDHPNIAKMIGYGVEGG--MHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGY 206
              H N+  ++G   + G  + +I+E    G+L++ L +K   +++  + V+  +    +
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--RNEFVPYKVAPEDLYKDF 130

Query: 207 LPPE---FFMHGIAD 218
           L  E    +   +A 
Sbjct: 131 LTLEHLICYSFQVAK 145

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 1e-08
 Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 179 LASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQ 238
           +     A+ +     +           ++ PE     +   ++DV+++GVLL EI +   
Sbjct: 175 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 234

Query: 239 ALDSSQKSL-VMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA 297
           +     K        +KE       D    E    +      C +   + RP  S++V+ 
Sbjct: 235 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEH 290

Query: 298 LRGDEEALAQIIEEN 312
           L         +++ N
Sbjct: 291 LG-------NLLQAN 298

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 1e-10
 Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 57/222 (25%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG-SPEEMTTDYLSELGIIVHVDHP 153
             + +   IG G    V         + VAIK+L+R    +        EL ++  V+H 
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 154 NIAKMIGYGVEGG-------MHLILELSPHGSLAS-----------------LLYAKWLP 189
           NI  ++              ++L++EL                         L   K L 
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136

Query: 190 DKWTHHIVSKIE-------------------------------GTFGYLPPEFFMHGIAD 218
                H   K                                  T  Y  PE  +     
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196

Query: 219 EKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT 260
           E  D+++ G ++ E++  +               +++L  P 
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.8 bits (144), Expect = 1e-10
 Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 53/195 (27%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRG--SPEEMTTDYLSELGIIVHVDH 152
           D F     +G G +  V   +  E G   A+K L +      +     L+E  I+  V+ 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 153 PNIAKMIGYGVE-GGMHLILELSPHGSLASLLYAKWLPD--------------------- 190
           P + K+     +   +++++E    G + S L                            
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160

Query: 191 ----------------------------KWTHHIVSKIEGTFGYLPPEFFMHGIADEKTD 222
                                       K        + GT   L PE  +    ++  D
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD 220

Query: 223 VYAYGVLLLEIITGR 237
            +A GVL+ E+  G 
Sbjct: 221 WWALGVLIYEMAAGY 235

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 59.9 bits (144), Expect = 1e-10
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 11/117 (9%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHP 153
           D++     +G+G Y+EV++   + + + V +K L     +++      E+ I+ ++   P
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI----KREIKILENLRGGP 90

Query: 154 NIAKMIGYG---VEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYL 207
           NI  +       V     L+ E   +     L   + L D      + +I     Y 
Sbjct: 91  NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYC 145

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 1e-10
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHP 153
             +     IG+G Y  V+K +  E  + VA+KR+      E + +  L E+ ++  + H 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 154 NIAKMIGYGVEGG-MHLILELSPHGSLASLLYAK-WLPDKWTHHIVSKIEGTFGYLPPEF 211
           NI ++         + L+ E                L  +     + ++    G+     
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 212 FMHG 215
            +H 
Sbjct: 122 VLHR 125

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 3e-10
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 10/129 (7%)

Query: 96  DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGSP---EEMTTDYLSELGIIV 148
           +NF    ++G G Y +V+  +     + G+  A+K L + +     + T    +E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 149 HVDH-PNIAKMIGYGVEGG-MHLILELSPHGSLASLLYAKW-LPDKWTHHIVSKIEGTFG 205
           H+   P +  +         +HLIL+    G L + L  +    +      V +I     
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 206 YLPPEFFMH 214
           +L     ++
Sbjct: 144 HLHKLGIIY 152

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.7 bits (136), Expect = 8e-10
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 5/122 (4%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
            ++     IG+G +  +++G  L + Q VAIK   R S      D      ++       
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAG--CTG 62

Query: 155 IAKMIGYGVEGGMHLILELSPHGSLASLL--YAKWLPDKWTHHIVSKIEGTFGYLPPEFF 212
           I  +  +G EG  ++++      SL  LL    +    K       ++      +  +  
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 122

Query: 213 MH 214
           ++
Sbjct: 123 VY 124

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 51.0 bits (121), Expect = 7e-08
 Identities = 15/164 (9%), Positives = 36/164 (21%), Gaps = 7/164 (4%)

Query: 139 DYLSELGIIVHVDHP-NIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIV 197
             + E  ++     P N            M  +++      +              +   
Sbjct: 115 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG----MVKFYRDPVTKQHIPYREK 170

Query: 198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALD--SSQKSLVMWSSMKE 255
             + GT  Y+     +      + D+ A G + +  + G        +  +   +  + E
Sbjct: 171 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE 230

Query: 256 LVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
               T                     N      P    +     
Sbjct: 231 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 2e-09
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 16/110 (14%)

Query: 101 ENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKM 158
             ++G G   +V +       +  A+K L      +       E+ +       P+I ++
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARREVELHWRASQCPHIVRI 70

Query: 159 IGYG-----VEGGMHLILELSPHGSLASLLYAKW---LPDKWTHHIVSKI 200
           +            + +++E    G L S +  +      ++    I+  I
Sbjct: 71  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 120

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 23/167 (13%), Positives = 61/167 (36%), Gaps = 17/167 (10%)

Query: 184 YAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSS 243
           +AK      +         T  Y+ PE       D+  D+++ GV++  ++ G     S+
Sbjct: 160 FAKETTSHNSLTTPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 216

Query: 244 QKSLVMWS-----SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA- 297
               +         M +   P    +  +E++  L+      +      R  +++ +   
Sbjct: 217 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI---RNLLKTEPTQRMTITEFMNHP 273

Query: 298 -LRGDEEALAQIIEENQSLRRLQRTFSEEFFDAEEFNSASLNELDVN 343
            +    +     +  ++ L+  +    E + D +E  +++L  + V+
Sbjct: 274 WIMQSTKVPQTPLHTSRVLKEDK----ERWEDVKEEMTSALATMRVD 316

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 3e-09
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 7/124 (5%)

Query: 96  DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPN 154
           + +     IG G + ++Y G  +  G+ VAIK       +        E  I   +    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE---CVKTKHPQLHIESKIYKMMQGGV 63

Query: 155 IAKMIGYGVEGGMHLIL--ELSPHGSLASLLY-AKWLPDKWTHHIVSKIEGTFGYLPPEF 211
               I +    G + ++  EL          + ++    K    +  ++     Y+  + 
Sbjct: 64  GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123

Query: 212 FMHG 215
           F+H 
Sbjct: 124 FIHR 127

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 2e-08
 Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 15/167 (8%)

Query: 139 DYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVS 198
           +Y+     I    H ++         G    ++ +   G  A             +    
Sbjct: 117 EYIHSKNFI----HRDVKPDNFLMGLGKKGNLVYIIDFGL-AKKYRDARTHQHIPYRENK 171

Query: 199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR------QALDSSQKSLVMWSS 252
            + GT  Y      +      + D+ + G +L+    G       +A    QK   +   
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 231

Query: 253 MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR 299
                   L   Y +E         + C +     +P  S + Q  R
Sbjct: 232 KMSTPIEVLCKGYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFR 274

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 15/131 (11%), Positives = 34/131 (25%), Gaps = 26/131 (19%)

Query: 102 NLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELG---------------- 145
            L+G+G  + V+    E      +K    G           + G                
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 146 -IIVHVDHPNIAKMIGYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTF 204
             +  +    + K+  +    G  +++EL              +  +    ++  I    
Sbjct: 66  RALQKLQGLAVPKVYAW---EGNAVLMELIDAK------ELYRVRVENPDEVLDMILEEV 116

Query: 205 GYLPPEFFMHG 215
                   +HG
Sbjct: 117 AKFYHRGIVHG 127

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.9 bits (115), Expect = 4e-07
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 101 ENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMI 159
              +G G ++ V+  + + +   VA+K +     +  T     E+ ++  V+  +  K  
Sbjct: 18  VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKED 75

Query: 160 GYGVEGGMHLILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPE--FFMHGIA 217
             G    + L+   +  G     +   +         + K     G            + 
Sbjct: 76  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 3e-04
 Identities = 14/69 (20%), Positives = 25/69 (36%)

Query: 169 LILELSPHGSLASLLYAKWLPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGV 228
           L+  +    +L  +  A      W     +    T  Y  PE  +        D+++   
Sbjct: 158 LMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTAC 217

Query: 229 LLLEIITGR 237
           L+ E+ITG 
Sbjct: 218 LIFELITGD 226

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	363
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.98
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.88
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.67
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	90.24
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	80.62

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-43  Score=316.93  Aligned_cols=205  Identities=19%  Similarity=0.333  Sum_probs=154.6

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILE  172 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E  172 (363)
                      ..++|.+.+.||+|+||+||+|++.  ..||||++.... .....+.|.+|+.+|.+++|||||+++|++.++..++|||
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEe
Confidence            3578999999999999999999864  359999997543 3445678999999999999999999999998888999999


Q ss_pred             ccCCCChhhhhhhcc-------------------------------------------------------CCCCceeEEE
Q 048684          173 LSPHGSLASLLYAKW-------------------------------------------------------LPDKWTHHIV  197 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~-------------------------------------------------------~~~~~~~~~~  197 (363)
                      ||++|+|.+++....                                                       ..........
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~  163 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF  163 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccc
Confidence            999999999884110                                                       0000011123


Q ss_pred             eecccccCCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh-hcCCcCCCCCCHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE-LVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l  273 (363)
                      ..++||+.|||||++.+   +.|+.++|||||||+||||+||+.||.+..........+.. ...|.+. ..+...+..+
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~l  242 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS-KVRSNCPKAM  242 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGG-GSCTTCCHHH
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcch-hccccchHHH
Confidence            45679999999999964   35899999999999999999999999876544333333333 2333221 1222233459


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          274 LLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      .+|+.+||+.||.+|||+.+|+++|+..
T Consensus       243 ~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         243 KRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999999998643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-41  Score=304.06  Aligned_cols=199  Identities=21%  Similarity=0.344  Sum_probs=151.6

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|+..+.||+|+||+||+|.+.++..||||.+......  .+.|.+|+.++++++|||||+++|++..++ .++|||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            578889999999999999999888899999999765433  468999999999999999999999988655 89999999


Q ss_pred             CCCChhhhhhhccCC--------------------------------------C---------C-------ceeEEEeec
Q 048684          175 PHGSLASLLYAKWLP--------------------------------------D---------K-------WTHHIVSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~~~--------------------------------------~---------~-------~~~~~~~~~  200 (363)
                      ++|+|.+++......                                      .         .       .........
T Consensus        83 ~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~  162 (263)
T d1sm2a_          83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  162 (263)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----------------
T ss_pred             CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecce
Confidence            999999987521000                                      0         0       000111234


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHhC-CCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG-RQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .||+.|||||++.+..|+.++|||||||++|||+|| .+||........ ...+.....+..+...+.    .+.+|+..
T Consensus       163 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~-~~~i~~~~~~~~p~~~~~----~l~~li~~  237 (263)
T d1sm2a_         163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-VEDISTGFRLYKPRLAST----HVYQIMNH  237 (263)
T ss_dssp             --CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHH-HHHHHHTCCCCCCTTSCH----HHHHHHHH
T ss_pred             ecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHH-HHHHHhcCCCCCccccCH----HHHHHHHH
Confidence            689999999999999999999999999999999995 555555443332 233333333333344444    48999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhcC
Q 048684          280 CINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ||+.||.+||||.+|+++|+.+
T Consensus       238 cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         238 CWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HccCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999998653

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-41  Score=306.92  Aligned_cols=200  Identities=20%  Similarity=0.313  Sum_probs=156.7

Q ss_pred             hcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEc
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILEL  173 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~  173 (363)
                      ..++|++.+.||+|+||+||+|.+.++..||||.+......  .+.|.+|+.++++++|||||+++|++.++..++||||
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey   88 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCC--HHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEe
Confidence            34678899999999999999999988889999999765433  4689999999999999999999999988889999999


Q ss_pred             cCCCChhhhhhhc---------------------------------------cCCCCc----------------eeEEEe
Q 048684          174 SPHGSLASLLYAK---------------------------------------WLPDKW----------------THHIVS  198 (363)
Q Consensus       174 ~~~gsL~~~l~~~---------------------------------------~~~~~~----------------~~~~~~  198 (363)
                      |++|+|.+++...                                       .+....                ......
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~  168 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence            9999998876410                                       000000                011122


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ...||+.|||||++.++.++.++|||||||++|||+||..|+............+.....+..+...+.+    +.+|+.
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~----l~~li~  244 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE----LYQLMR  244 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHH----HHHHHH
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHH----HHHHHH
Confidence            3468999999999999999999999999999999999665554433333333444444444444545554    899999


Q ss_pred             HccccCCCCCCCHHHHHHHhh
Q 048684          279 ACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +||+.||.+||||.+|++.|+
T Consensus       245 ~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         245 LCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHhh
Confidence            999999999999999999885

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=303.92  Aligned_cols=200  Identities=24%  Similarity=0.360  Sum_probs=156.9

Q ss_pred             CCCccCCc-ccccCceEEEEEEEc---CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEE
Q 048684           96 DNFSHENL-IGQGGYAEVYKGQLE---DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLIL  171 (363)
Q Consensus        96 ~~f~~~~~-lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~  171 (363)
                      ++|...+. ||+|+||+||+|.+.   ++..||||.++........+.|.+|+.+|++++|||||+++|++..+..|+||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvm   87 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   87 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEE
Confidence            45666664 999999999999753   35689999998776666678899999999999999999999999888899999


Q ss_pred             EccCCCChhhhhhhcc--CCC------------------------------------------------------CceeE
Q 048684          172 ELSPHGSLASLLYAKW--LPD------------------------------------------------------KWTHH  195 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~--~~~------------------------------------------------------~~~~~  195 (363)
                      |||++|+|.+++....  ++.                                                      .....
T Consensus        88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  167 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  167 (285)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence            9999999999874110  000                                                      00001


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      .....+||+.|||||++.++.++.++|||||||++|||+| |+.||.+....... ..+.....+..+...+.+    +.
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~-~~i~~~~~~~~p~~~~~~----l~  242 (285)
T d1u59a_         168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQGKRMECPPECPPE----LY  242 (285)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-HHHHTTCCCCCCTTCCHH----HH
T ss_pred             cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCcCCHH----HH
Confidence            1123458999999999999999999999999999999998 99999876544333 333333344444445544    89


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +|+..||+.||.+|||+.+|++.|+.
T Consensus       243 ~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         243 ALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999999999998853

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-40  Score=296.83  Aligned_cols=198  Identities=19%  Similarity=0.307  Sum_probs=158.3

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEcc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILELS  174 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~~  174 (363)
                      ++|+..++||+|+||+||+|++.+++.||||.++.....  .+.|.+|+.++++++|||||+++|++.+++ +++||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSC--HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCC--HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            689999999999999999999988889999999865543  368999999999999999999999988755 89999999


Q ss_pred             CCCChhhhhhhcc--------------------------------------CCCCce----------------eEEEeec
Q 048684          175 PHGSLASLLYAKW--------------------------------------LPDKWT----------------HHIVSKI  200 (363)
Q Consensus       175 ~~gsL~~~l~~~~--------------------------------------~~~~~~----------------~~~~~~~  200 (363)
                      ++|+|..++....                                      +.....                .......
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~  161 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS  161 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCS
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeeccc
Confidence            9999988764110                                      000000                0011224


Q ss_pred             ccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .||+.|+|||++.+..++.++|||||||++|||+| |+.||.+........... ....+..+...+.    .+.+|+.+
T Consensus       162 ~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~----~l~~li~~  236 (258)
T d1k2pa_         162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASE----KVYTIMYS  236 (258)
T ss_dssp             CCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCH----HHHHHHHH
T ss_pred             CCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH-hCCCCCCcccccH----HHHHHHHH
Confidence            58999999999999999999999999999999998 899998876655544433 3333344444454    49999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||+.||.+|||+.+++++|..
T Consensus       237 cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         237 CWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             TTCSSGGGSCCHHHHHHHHHC
T ss_pred             HccCCHhHCcCHHHHHHHhhC
Confidence            999999999999999998853

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-41  Score=305.61  Aligned_cols=199  Identities=21%  Similarity=0.292  Sum_probs=149.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+......+..+.+.+|+.+|++++|||||++++++.+++ .||||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5799999999999999999995 5799999999976554444567999999999999999999999888776 8899999


Q ss_pred             cCCCChhhhhhhcc-------------------------------------CCC---------C--------ceeEEEee
Q 048684          174 SPHGSLASLLYAKW-------------------------------------LPD---------K--------WTHHIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~-------------------------------------~~~---------~--------~~~~~~~~  199 (363)
                      |++|+|.++|....                                     +..         .        ........
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~  164 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  164 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence            99999999885110                                     000         0        01112345


Q ss_pred             cccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      .+||+.|||||++.+..+ +.++|||||||++|||+||++||....................   ......+..+.+|+.
T Consensus       165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~  241 (271)
T d1nvra_         165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLALLH  241 (271)
T ss_dssp             CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS---TTGGGSCHHHHHHHH
T ss_pred             eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---CccccCCHHHHHHHH
Confidence            679999999999988876 6789999999999999999999986654433333222211111   111223345889999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.|++++
T Consensus       242 ~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         242 KILVENPSARITIPDIKKD  260 (271)
T ss_dssp             HHSCSSTTTSCCHHHHTTC
T ss_pred             HHcCCChhHCcCHHHHhcC
Confidence            9999999999999999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=301.34  Aligned_cols=197  Identities=22%  Similarity=0.338  Sum_probs=151.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEc---CCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVE---GGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~~lv  170 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+.... .+...+.|.+|+.+|++++|||||++++++.+   ..+|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5799999999999999999985 679999999997654 34456779999999999999999999998764   237999


Q ss_pred             EEccCCCChhhhhhhc-----cCCC-------------------------Ccee--------------------------
Q 048684          171 LELSPHGSLASLLYAK-----WLPD-------------------------KWTH--------------------------  194 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~-----~~~~-------------------------~~~~--------------------------  194 (363)
                      ||||++|+|.+++...     .+++                         ...|                          
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999877410     0000                         0111                          


Q ss_pred             -----EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHH
Q 048684          195 -----HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQ  269 (363)
Q Consensus       195 -----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (363)
                           ......+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+............ .+.++..++.  
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~s~--  240 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRYSD--  240 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCH--
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-CCCCCcccCH--
Confidence                 11234579999999999999999999999999999999999999998776554443333332 2333344554  


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                        .+.+|+.+||+.||.+|||+.|++++
T Consensus       241 --~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         241 --ELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             --HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --HHHHHHHHHcCCChhHCcCHHHHHhC
Confidence              49999999999999999999999864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=305.78  Aligned_cols=198  Identities=18%  Similarity=0.311  Sum_probs=155.0

Q ss_pred             CCCccCCcccccCceEEEEEE-EcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQ-LEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|+..+.||+|+||+||+|. ..+|+.||||.+...... ..+.+.+|+.+|++++|||||++++++.+.+ .|+||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh-HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            579999999999999999998 467999999998754332 2567999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhccCCC------------------------------------C---------cee------EEEeeccc
Q 048684          174 SPHGSLASLLYAKWLPD------------------------------------K---------WTH------HIVSKIEG  202 (363)
Q Consensus       174 ~~~gsL~~~l~~~~~~~------------------------------------~---------~~~------~~~~~~~g  202 (363)
                      |++|+|.+++....++.                                    .         ...      ......+|
T Consensus        99 ~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~g  178 (293)
T d1yhwa1          99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG  178 (293)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCS
T ss_pred             cCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccccccc
Confidence            99999998764211100                                    0         000      11234469


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|||||++.+..|+.++|||||||++|||+||+.||.+.......+....... +.+  ..+...+..+.+|+.+||+
T Consensus       179 t~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~-~~~--~~~~~~s~~~~~li~~~L~  255 (293)
T d1yhwa1         179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PEL--QNPEKLSAIFRDFLNRCLD  255 (293)
T ss_dssp             CGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-CCC--SSGGGSCHHHHHHHHHHTC
T ss_pred             CCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-CCC--CCcccCCHHHHHHHHHHcc
Confidence            9999999999999999999999999999999999999987665544444433322 111  1223334559999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 048684          283 QTSACRPQMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RPt~~evl~~  297 (363)
                      .||.+|||+.|++++
T Consensus       256 ~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         256 MDVEKRGSAKELLQH  270 (293)
T ss_dssp             SSTTTSCCHHHHTTC
T ss_pred             CChhHCcCHHHHhcC
Confidence            999999999999874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=296.55  Aligned_cols=194  Identities=21%  Similarity=0.300  Sum_probs=148.0

Q ss_pred             CcccccCceEEEEEEEc---CCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEccCCC
Q 048684          102 NLIGQGGYAEVYKGQLE---DGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELSPHG  177 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~~~g  177 (363)
                      ++||+|+||+||+|.+.   +++.||||.+.... .....+.|.+|+.+|++++|||||+++|+|..+..+||||||++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            46999999999999853   35689999997543 334457899999999999999999999999888899999999999


Q ss_pred             Chhhhhhhcc------------------------------------------------------CCC-CceeEEEeeccc
Q 048684          178 SLASLLYAKW------------------------------------------------------LPD-KWTHHIVSKIEG  202 (363)
Q Consensus       178 sL~~~l~~~~------------------------------------------------------~~~-~~~~~~~~~~~g  202 (363)
                      +|.+++....                                                      +.. ...........|
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~g  172 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW  172 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CC
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCC
Confidence            9998875110                                                      000 001111223468


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      |+.|||||++.+..++.++|||||||++|||+| |++||.+......... +.....+..+..++.    .+.+|+.+||
T Consensus       173 t~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~-i~~~~~~~~p~~~~~----~~~~li~~cl  247 (277)
T d1xbba_         173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKGERMGCPAGCPR----EMYDLMNLCW  247 (277)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCH----HHHHHHHHHT
T ss_pred             CceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH-HHcCCCCCCCcccCH----HHHHHHHHHc
Confidence            999999999999999999999999999999998 8999987655443332 333333344444554    4899999999


Q ss_pred             ccCCCCCCCHHHHHHHhhc
Q 048684          282 NQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~L~~  300 (363)
                      +.||.+|||+.+|+..|+.
T Consensus       248 ~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         248 TYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CSSTTTSCCHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHhhC
Confidence            9999999999999988754

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-40  Score=297.65  Aligned_cols=196  Identities=24%  Similarity=0.389  Sum_probs=153.6

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+....  .......+.+|+.++++++|||||++++++.+++ .|+||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4699999999999999999996 568999999986432  1223567899999999999999999999988776 88999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCC-------------ceeEEEeecc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDK-------------WTHHIVSKIE  201 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~-------------~~~~~~~~~~  201 (363)
                      |||++|+|.+++....                                     +...             .........+
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC  165 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETT
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccC
Confidence            9999999998874110                                     0000             0011123457


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      ||+.|||||++.+..|+.++|||||||+||||+||+.||.+.+...........  .+.++...+.    .+.+|+.+||
T Consensus       166 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~----~~~~li~~~L  239 (263)
T d2j4za1         166 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPDFVTE----GARDLISRLL  239 (263)
T ss_dssp             EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCH----HHHHHHHHHT
T ss_pred             CCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCccCCH----HHHHHHHHHc
Confidence            999999999999999999999999999999999999999876554433332222  2233333444    4899999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.||.+|||+.|++++
T Consensus       240 ~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         240 KHNPSQRPMLREVLEH  255 (263)
T ss_dssp             CSSGGGSCCHHHHHTC
T ss_pred             cCCHhHCcCHHHHHcC
Confidence            9999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-40  Score=302.08  Aligned_cols=202  Identities=21%  Similarity=0.302  Sum_probs=157.7

Q ss_pred             hcCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ..++|+..+.||+|+||+||+|.+ .+|+.||||.+..+...  .+.|.+|+.+|++++|||||+++|++.+++ .++||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccch--HHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            446789999999999999999996 46899999999765433  568999999999999999999999988765 89999


Q ss_pred             EccCCCChhhhhhhcc---------------------------------------CC----------------CCceeEE
Q 048684          172 ELSPHGSLASLLYAKW---------------------------------------LP----------------DKWTHHI  196 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~---------------------------------------~~----------------~~~~~~~  196 (363)
                      |||++|+|.+++....                                       +.                .......
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence            9999999998874110                                       00                0001112


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      .....||+.|||||++.++.|+.++|||||||++|||+||..||.........+..+.....+..+...+.+    +.+|
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----l~~l  248 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK----VYEL  248 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHH----HHHH
T ss_pred             eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHH----HHHH
Confidence            223458899999999999999999999999999999999777665443333344444444444444445554    9999


Q ss_pred             HHHccccCCCCCCCHHHHHHHhhcC
Q 048684          277 ASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       277 i~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +..||+.||.+|||+.+|++.|+..
T Consensus       249 i~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         249 MRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999888643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-40  Score=303.46  Aligned_cols=201  Identities=19%  Similarity=0.303  Sum_probs=147.4

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .+.|++.+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.+|++++|||||++++++.+++ +|||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46799999999999999999985 5699999999976554444567889999999999999999999888776 899999


Q ss_pred             ccCCCChhhhhhhc-------------------------------c------C---CCCce--------------eEEEe
Q 048684          173 LSPHGSLASLLYAK-------------------------------W------L---PDKWT--------------HHIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-------------------------------~------~---~~~~~--------------~~~~~  198 (363)
                      ||++|+|.++|...                               .      +   .....              .....
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence            99999999887411                               0      0   00000              01123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|||||++.+..|+.++|||||||++|||+||++||.+..................  .......+..+.+|+.
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~s~~~~~li~  245 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD--SPYWDDISDSAKDFIR  245 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC--TTTTTTSCHHHHHHHH
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC--CccccCCCHHHHHHHH
Confidence            45799999999999999999999999999999999999999988765555444444332221  1122233445999999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.|++++
T Consensus       246 ~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         246 HLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHSCSSGGGSCCHHHHHHS
T ss_pred             HHccCCHhHCcCHHHHhcC
Confidence            9999999999999999985

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-40  Score=304.96  Aligned_cols=202  Identities=22%  Similarity=0.335  Sum_probs=157.4

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc-CC-----cEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE-DG-----QFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g-----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~  166 (363)
                      ..++|++.++||+|+||+||+|+.. .+     ..||||.+...........|.+|+.+|.++ +|||||++++++.+.+
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            3468999999999999999999853 22     369999997655555567899999999998 8999999999988766


Q ss_pred             -eEEEEEccCCCChhhhhhhccC------------------------C--------------------------------
Q 048684          167 -MHLILELSPHGSLASLLYAKWL------------------------P--------------------------------  189 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~------------------------~--------------------------------  189 (363)
                       .++|||||++|+|.++|.....                        +                                
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N  194 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  194 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence             8999999999999998743210                        0                                


Q ss_pred             ---------------------CCceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhH
Q 048684          190 ---------------------DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSL  247 (363)
Q Consensus       190 ---------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~  247 (363)
                                           ...........+||+.|||||++.++.|+.++|||||||+||||+| |++||.+.....
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence                                 0000011123358999999999999999999999999999999998 899998876655


Q ss_pred             HHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          248 VMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .....+.....+..+...+.+    +.+|+.+||+.||.+|||+.||+++|.
T Consensus       275 ~~~~~~~~~~~~~~p~~~~~~----l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         275 NFYKLIQNGFKMDQPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCcCCHH----HHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            556666665555555555554    999999999999999999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-39  Score=299.93  Aligned_cols=200  Identities=25%  Similarity=0.372  Sum_probs=151.4

Q ss_pred             CCCccCCcccccCceEEEEEEEc-CC---cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE-DG---QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|+..++||+|+||+||+|.+. +|   ..||||.+.........+.|.+|+.+|++++|||||+++|++..++ .++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            45677789999999999999863 33   3699999987666666788999999999999999999999987765 8999


Q ss_pred             EEccCCCChhhhhhhcc--------------------------------------CCCCceeE-----------------
Q 048684          171 LELSPHGSLASLLYAKW--------------------------------------LPDKWTHH-----------------  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~-----------------  195 (363)
                      ||||++|+|.+++....                                      +.......                 
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  185 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  185 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcc
Confidence            99999999988774110                                      00000000                 


Q ss_pred             ---EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          196 ---IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       196 ---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                         ......||+.|||||++.++.++.++|||||||+||||+| |++||.+.......... .....+..+...+.    
T Consensus       186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i-~~~~~~~~~~~~~~----  260 (299)
T d1jpaa_         186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMDCPS----  260 (299)
T ss_dssp             ----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCCH----
T ss_pred             eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCccchH----
Confidence               0112347899999999999999999999999999999998 89999876554443332 22233333333444    


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          272 RLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+.+|+.+||+.||.+|||+.+|++.|+.
T Consensus       261 ~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            49999999999999999999999998853

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-39  Score=293.52  Aligned_cols=202  Identities=23%  Similarity=0.329  Sum_probs=152.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC-C----cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED-G----QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g----~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      .+.|+..++||+|+||+||+|.+.+ +    ..||||.+.....+.....|.+|+.++.+++|||||+++|++.+.. .+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            3568888999999999999998643 2    4799999987666666678999999999999999999999998755 89


Q ss_pred             EEEEccCCCChhhhhhhcc--------------------------------------CCCCce-----------------
Q 048684          169 LILELSPHGSLASLLYAKW--------------------------------------LPDKWT-----------------  193 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~--------------------------------------~~~~~~-----------------  193 (363)
                      +|||||.+|+|.+++....                                      +.....                 
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            9999999999887663100                                      000000                 


Q ss_pred             -eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          194 -HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       194 -~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                       ........||+.|||||++.++.++.++|||||||++|||+||..|+............+.....+..+...+    ..
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~  241 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP----SA  241 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCB----HH
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhH----HH
Confidence             0112234589999999999999999999999999999999997666544333333334444444444444444    44


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +.+|+.+||+.||.+||||.+|++.|+.
T Consensus       242 l~~li~~cl~~~p~~RPt~~eil~~L~~  269 (283)
T d1mqba_         242 IYQLMMQCWQQERARRPKFADIVSILDK  269 (283)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHCcCCHhHCcCHHHHHHHHHH
Confidence            9999999999999999999999998854

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-40  Score=300.83  Aligned_cols=196  Identities=16%  Similarity=0.250  Sum_probs=152.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||++....  .+...+.+.+|+.+|++++|||||++++++.+.+ .|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5799999999999999999985 579999999986432  1233567999999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhc-------------------------------------cCCCC-----------------ceeEEE
Q 048684          172 ELSPHGSLASLLYAK-------------------------------------WLPDK-----------------WTHHIV  197 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------------~~~~~-----------------~~~~~~  197 (363)
                      |||++|+|.+++...                                     .+...                 ......
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~  167 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  167 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccc
Confidence            999999998877410                                     00000                 011122


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ...+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+............  +.++...++    .+.+|+
T Consensus       168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~----~~~~li  241 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--YDFPEKFFP----KARDLV  241 (288)
T ss_dssp             --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC--CCCCTTCCH----HHHHHH
T ss_pred             ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC--CCCCccCCH----HHHHHH
Confidence            34679999999999999999999999999999999999999998876555444433332  233334444    489999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||+.||.+|||+.|+++.
T Consensus       242 ~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         242 EKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             HTTSCSSGGGSTTSGGGTCH
T ss_pred             HHHccCCHhHCcCHHHHcCC
Confidence            99999999999999998643

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-39  Score=296.04  Aligned_cols=200  Identities=19%  Similarity=0.268  Sum_probs=153.4

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEEEEcc
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLILELS  174 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv~E~~  174 (363)
                      .++|++.+.||+|+||+||+|...++..||||.+......  .+.|.+|+.++++++|||||+++|++.+++.++|||||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCC--HHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEec
Confidence            4679999999999999999999888888999999755433  46899999999999999999999999888899999999


Q ss_pred             CCCChhhhhhhcc---------------------------------------CCCCc----------------eeEEEee
Q 048684          175 PHGSLASLLYAKW---------------------------------------LPDKW----------------THHIVSK  199 (363)
Q Consensus       175 ~~gsL~~~l~~~~---------------------------------------~~~~~----------------~~~~~~~  199 (363)
                      ++|+|..++....                                       +....                .......
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  173 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  173 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeecc
Confidence            9999987764100                                       00000                0011123


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      ..||+.|+|||++..+.++.++|||||||++|||+||..|+............+.....+..+...+.    .+.+|+.+
T Consensus       174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~l~~li~~  249 (285)
T d1fmka3         174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPE----SLHDLMCQ  249 (285)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCH----HHHHHHHH
T ss_pred             ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCH----HHHHHHHH
Confidence            46899999999999999999999999999999999976665544333333333333333344444444    49999999


Q ss_pred             ccccCCCCCCCHHHHHHHhhc
Q 048684          280 CINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ||+.||.+|||+.+|+++|+.
T Consensus       250 cl~~dP~~Rps~~~i~~~L~~  270 (285)
T d1fmka3         250 CWRKEPEERPTFEYLQAFLED  270 (285)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHT
T ss_pred             HcccCHhHCcCHHHHHHHHhh
Confidence            999999999999999988864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-39  Score=298.34  Aligned_cols=208  Identities=22%  Similarity=0.315  Sum_probs=162.0

Q ss_pred             HHHHHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 048684           89 SELQAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYG  162 (363)
Q Consensus        89 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~  162 (363)
                      .+++...++|++.+.||+|+||+||+|+..      +++.||||+++.....+..+.|.+|+.+|++++||||+++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            345556789999999999999999999853      35789999998766666678899999999999999999999988


Q ss_pred             EcCC-eEEEEEccCCCChhhhhhhccC-----------------------------------------------------
Q 048684          163 VEGG-MHLILELSPHGSLASLLYAKWL-----------------------------------------------------  188 (363)
Q Consensus       163 ~~~~-~~lv~E~~~~gsL~~~l~~~~~-----------------------------------------------------  188 (363)
                      ...+ .++||||+++|+|.++|.....                                                     
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            8765 8999999999999998742100                                                     


Q ss_pred             --------C-----------------CCceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCC-CCCCC
Q 048684          189 --------P-----------------DKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR-QALDS  242 (363)
Q Consensus       189 --------~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~-~P~~~  242 (363)
                              .                 ...........+||+.|+|||++.+..|+.++|||||||++|||++|. +||.+
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence                    0                 000011122346889999999999999999999999999999999995 67877


Q ss_pred             chhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          243 SQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ............. ..+..+...++    ++.+|+..||+.||.+||||.||++.|+.+
T Consensus       246 ~~~~e~~~~v~~~-~~~~~p~~~~~----~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         246 MAHEEVIYYVRDG-NILACPENCPL----ELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             SCHHHHHHHHHTT-CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHcC-CCCCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            6655544443333 23333344444    489999999999999999999999998754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-40  Score=301.32  Aligned_cols=198  Identities=24%  Similarity=0.337  Sum_probs=152.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      +.|++.+.||+|+||+||+|.. .+|+.||||.+...... ..+.|.+|+.+|++++|||||++++++.+.+ .++||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSG-GGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHH-HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            5689999999999999999985 57999999999765433 3578999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhcc--CC------------------------------------CCceeEE---------------Eeec
Q 048684          174 SPHGSLASLLYAKW--LP------------------------------------DKWTHHI---------------VSKI  200 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--~~------------------------------------~~~~~~~---------------~~~~  200 (363)
                      |++|+|.+++....  ++                                    .+....+               ....
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~  170 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF  170 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence            99999998864210  00                                    0000000               1234


Q ss_pred             ccccCCCCchhhc-----cCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          201 EGTFGYLPPEFFM-----HGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       201 ~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      +||+.|||||++.     +..|+.++|||||||++|||+||+.||.+............... +.+  ..+...+..+.+
T Consensus       171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~-~~~--~~~~~~s~~~~~  247 (288)
T d2jfla1         171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP-PTL--AQPSRWSSNFKD  247 (288)
T ss_dssp             CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCC-CCC--SSGGGSCHHHHH
T ss_pred             ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-CCC--CccccCCHHHHH
Confidence            6999999999984     45689999999999999999999999987765554444433322 111  112233455999


Q ss_pred             HHHHccccCCCCCCCHHHHHHH
Q 048684          276 IASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~  297 (363)
                      |+.+||+.||.+|||+.|++++
T Consensus       248 li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         248 FLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=291.03  Aligned_cols=198  Identities=21%  Similarity=0.339  Sum_probs=152.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~E  172 (363)
                      .++|+..+.||+|+||.||+|.+. |..||||.++...   ..+.|.+|+.++++++|||||+++|++.+.  .+++|||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            356888899999999999999985 8899999996543   346799999999999999999999998653  3899999


Q ss_pred             ccCCCChhhhhhhcc---------------------------------------CCCCce------------eEEEeecc
Q 048684          173 LSPHGSLASLLYAKW---------------------------------------LPDKWT------------HHIVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~---------------------------------------~~~~~~------------~~~~~~~~  201 (363)
                      |+++|+|.++|....                                       +.....            ........
T Consensus        82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~  161 (262)
T d1byga_          82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  161 (262)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence            999999999985110                                       000000            11122346


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHc
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASAC  280 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  280 (363)
                      +|+.|+|||++.++.++.++|||||||++|||+| |++||............ .....+..+...+++    +.+|+.+|
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~----~~~li~~c  236 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPA----VYEVMKNC  236 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-TTTCCCCCCTTCCHH----HHHHHHHH
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCccCCHH----HHHHHHHH
Confidence            8999999999999999999999999999999998 78888876555444333 333444454545544    89999999


Q ss_pred             cccCCCCCCCHHHHHHHhhcC
Q 048684          281 INQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       281 l~~dP~~RPt~~evl~~L~~~  301 (363)
                      |+.||.+|||+.+|+++|+.+
T Consensus       237 l~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         237 WHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCHhHCcCHHHHHHHHHHH
Confidence            999999999999999998643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-40  Score=306.10  Aligned_cols=203  Identities=17%  Similarity=0.263  Sum_probs=151.6

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|+..+.||+|+||+||+|.. .+|+.||||.+...........+.+|+.+|++++|||||++++++.+.. .|+|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            57899999999999999999995 6799999999986655555678999999999999999999999888776 899999


Q ss_pred             ccCCCChhhhhhhc---------------------------cC-----------CCCceeE-------------EEeecc
Q 048684          173 LSPHGSLASLLYAK---------------------------WL-----------PDKWTHH-------------IVSKIE  201 (363)
Q Consensus       173 ~~~~gsL~~~l~~~---------------------------~~-----------~~~~~~~-------------~~~~~~  201 (363)
                      ||++|+|.+++...                           .+           .......             .....+
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  164 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  164 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---C
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccccc
Confidence            99999999887411                           00           0000000             123457


Q ss_pred             cccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh-----------------------------
Q 048684          202 GTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS-----------------------------  252 (363)
Q Consensus       202 gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~-----------------------------  252 (363)
                      ||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+........                             
T Consensus       165 GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T d1s9ja_         165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS  244 (322)
T ss_dssp             CSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------------
T ss_pred             CCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccc
Confidence            999999999999999999999999999999999999999765432111100                             


Q ss_pred             ---------hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          253 ---------MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       253 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                               .........+.......+..+.+|+.+||+.||.+|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         245 RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             -CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                     000000000000011123458999999999999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-39  Score=292.90  Aligned_cols=202  Identities=22%  Similarity=0.309  Sum_probs=156.6

Q ss_pred             cCCCccCCcccccCceEEEEEEEcC----CcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQLED----GQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      .++|++.+.||+|+||+||+|.+..    +..||||.+.....+...+.|.+|+.+|++++|||||+++|++.++..++|
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv   85 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   85 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEE
Confidence            4679999999999999999998532    457999999766666667889999999999999999999999988889999


Q ss_pred             EEccCCCChhhhhhhccCC--------------------------------C----------------------CceeEE
Q 048684          171 LELSPHGSLASLLYAKWLP--------------------------------D----------------------KWTHHI  196 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~~~--------------------------------~----------------------~~~~~~  196 (363)
                      ||||++|+|.+++......                                .                      ......
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~  165 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  165 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCccee
Confidence            9999999998876411000                                0                      000111


Q ss_pred             EeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHH
Q 048684          197 VSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLL  275 (363)
Q Consensus       197 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  275 (363)
                      .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||.+............ ...+..+...+.    .+.+
T Consensus       166 ~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~~~~----~~~~  240 (273)
T d1mp8a_         166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNCPP----TLYS  240 (273)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCCCTTCCH----HHHH
T ss_pred             ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCH----HHHH
Confidence            233468999999999999999999999999999999998 8999987765544443333 333333444444    4999


Q ss_pred             HHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          276 IASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       276 li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      |+..||+.||.+|||+.+|++.|+.+
T Consensus       241 li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         241 LMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999999999999999999998643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=295.31  Aligned_cols=200  Identities=22%  Similarity=0.395  Sum_probs=151.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc----EEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ----FVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~lv  170 (363)
                      ++|+..++||+|+||+||+|.+ .+|+    .||||.+.........+.|.+|+.++++++|||||+++|+|.++..+++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            4699999999999999999985 4454    5899998765555557889999999999999999999999999999999


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------------------------CCCCceeE
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------------------------LPDKWTHH  195 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------------------------~~~~~~~~  195 (363)
                      |||+.+|+|.+++....                                                       ........
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~  168 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  168 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccc
Confidence            99999999988764110                                                       00011111


Q ss_pred             EEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHH
Q 048684          196 IVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLL  274 (363)
Q Consensus       196 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  274 (363)
                      ......||+.|||||++.++.|+.++|||||||+||||+| |.+||.+....... ..+.....+..+...+.    .+.
T Consensus       169 ~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~-~~i~~~~~~~~p~~~~~----~~~  243 (317)
T d1xkka_         169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTI----DVY  243 (317)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH-HHHHHTCCCCCCTTBCH----HHH
T ss_pred             cccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH-HHHHcCCCCCCCcccCH----HHH
Confidence            2233458999999999999999999999999999999999 88999876554433 33333333333334444    489


Q ss_pred             HHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          275 LIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       275 ~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      +|+.+||+.||.+|||+.+|+++|..
T Consensus       244 ~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         244 MIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhCCCChhhCcCHHHHHHHHHH
Confidence            99999999999999999999998754

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-39  Score=297.10  Aligned_cols=197  Identities=19%  Similarity=0.297  Sum_probs=151.8

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .|+..+.||+|+||+||+|.. .+|+.||||.+....  .....+.|.+|+.+|++++|||||++++++.+++ .|+|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            488999999999999999984 678999999997554  2344567999999999999999999999888766 899999


Q ss_pred             ccCCCChhhhhhhc-cC------------------------------C------CCce-----------eEEEeeccccc
Q 048684          173 LSPHGSLASLLYAK-WL------------------------------P------DKWT-----------HHIVSKIEGTF  204 (363)
Q Consensus       173 ~~~~gsL~~~l~~~-~~------------------------------~------~~~~-----------~~~~~~~~gt~  204 (363)
                      ||++|+|..++... .+                              +      ....           .......+||+
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~  175 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP  175 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCc
Confidence            99999887654310 00                              0      0000           01123356999


Q ss_pred             CCCCchhhcc---CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 048684          205 GYLPPEFFMH---GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACI  281 (363)
Q Consensus       205 ~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  281 (363)
                      .|||||++.+   +.|+.++|||||||++|||++|+.||.+................+.....++.    .+.+|+.+||
T Consensus       176 ~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~----~~~~li~~~L  251 (309)
T d1u5ra_         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCL  251 (309)
T ss_dssp             GGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCH----HHHHHHHHHT
T ss_pred             cccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCH----HHHHHHHHHC
Confidence            9999999964   46899999999999999999999999876655444444443333222333444    4999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 048684          282 NQTSACRPQMSKVVQA  297 (363)
Q Consensus       282 ~~dP~~RPt~~evl~~  297 (363)
                      +.||.+|||+.+++++
T Consensus       252 ~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         252 QKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             CSSGGGSCCHHHHTTC
T ss_pred             cCChhHCcCHHHHHhC
Confidence            9999999999999874

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-39  Score=290.32  Aligned_cols=200  Identities=22%  Similarity=0.338  Sum_probs=148.8

Q ss_pred             CCCccCCcccccCceEEEEEEEc--CC--cEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLE--DG--QFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGGMHL  169 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~--~g--~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~l  169 (363)
                      ++|++.+.||+|+||+||+|.+.  ++  ..||||.+....  ..+..+.|.+|+.+|++++|||||+++|++.++..++
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            56889999999999999999852  23  368999987543  2344678999999999999999999999998888999


Q ss_pred             EEEccCCCChhhhhhhcc-------------------------------------------------------CCCC-ce
Q 048684          170 ILELSPHGSLASLLYAKW-------------------------------------------------------LPDK-WT  193 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~-------------------------------------------------------~~~~-~~  193 (363)
                      |||||++|+|.+++....                                                       +... ..
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~  167 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  167 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCc
Confidence            999999999988764100                                                       0000 01


Q ss_pred             eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHH
Q 048684          194 HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTR  272 (363)
Q Consensus       194 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (363)
                      ........||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+..............+..+...+..    
T Consensus       168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~----  243 (273)
T d1u46a_         168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD----  243 (273)
T ss_dssp             EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHH----
T ss_pred             ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHH----
Confidence            111223458889999999999999999999999999999998 899998877666655555554444444445544    


Q ss_pred             HHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          273 LLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       273 l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      +.+|+.+||+.||.+|||+.+|++.|.
T Consensus       244 l~~li~~cl~~dp~~RPt~~ei~~~L~  270 (273)
T d1u46a_         244 IYNVMVQCWAHKPEDRPTFVALRDFLL  270 (273)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            999999999999999999999998875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-38  Score=293.66  Aligned_cols=204  Identities=20%  Similarity=0.329  Sum_probs=161.9

Q ss_pred             HhcCCCccCCcccccCceEEEEEEE------cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcC
Q 048684           93 AATDNFSHENLIGQGGYAEVYKGQL------EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEG  165 (363)
Q Consensus        93 ~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~  165 (363)
                      ...++|++.++||+|+||.||+|++      .+++.||||++...........|.+|+.++.++ +|||||+++|++.++
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            3447899999999999999999985      246789999998766666677899999999999 699999999999876


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc---------------------------------------------------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKW---------------------------------------------------------  187 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~---------------------------------------------------------  187 (363)
                      + .++|||||++|+|.++|....                                                         
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT  179 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence            6 899999999999988874211                                                         


Q ss_pred             ---------------CCCCceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHH
Q 048684          188 ---------------LPDKWTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWS  251 (363)
Q Consensus       188 ---------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~  251 (363)
                                     .............+||+.|+|||++.++.++.++|||||||++|||+| |.+||.........+.
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~  259 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK  259 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                           000001112223468999999999999999999999999999999999 5666666555555556


Q ss_pred             hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          252 SMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+.....+..+...+.+    +.+|+.+||+.||.+|||+.+|+++|+.
T Consensus       260 ~i~~~~~~~~~~~~~~~----l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         260 MIKEGFRMLSPEHAPAE----MYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHHHTCCCCCCTTSCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhcCCCCCCcccccHH----HHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            66665555554445554    9999999999999999999999998864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=292.63  Aligned_cols=201  Identities=20%  Similarity=0.227  Sum_probs=154.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-----EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      +.|++.+.||+|+||+||+|.. .+|+.||||.+.....     ....+.|.+|+.+|++++|||||++++++.+.+ +|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5799999999999999999995 6799999999864331     123578999999999999999999999988776 89


Q ss_pred             EEEEccCCCChhhhhhhcc-------------------------------------CCCCc----ee-------------
Q 048684          169 LILELSPHGSLASLLYAKW-------------------------------------LPDKW----TH-------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~----~~-------------  194 (363)
                      ||||||++|+|.++|....                                     +....    ..             
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~  169 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  169 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence            9999999999999875110                                     00000    00             


Q ss_pred             -EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          195 -HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                       ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.+................  +....+...+..+
T Consensus       170 ~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~  247 (293)
T d1jksa_         170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--FEDEYFSNTSALA  247 (293)
T ss_dssp             SCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCHHH
T ss_pred             CccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCchhcCCCCHHH
Confidence             0112346999999999999999999999999999999999999999887655544443332221  1111111233458


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHh
Q 048684          274 LLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+|+.+||+.||.+|||+.|++++-
T Consensus       248 ~~li~~~L~~dP~~R~s~~eil~hp  272 (293)
T d1jksa_         248 KDFIRRLLVKDPKKRMTIQDSLQHP  272 (293)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCc
Confidence            9999999999999999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=289.15  Aligned_cols=194  Identities=22%  Similarity=0.333  Sum_probs=147.5

Q ss_pred             ccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----CeEEEE
Q 048684           99 SHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-----GMHLIL  171 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~lv~  171 (363)
                      ...++||+|+||+||+|.. .+|+.||||.+.... .....+.|.+|+++|++++|||||++++++.+.     .+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4556899999999999985 568899999986543 344567899999999999999999999987641     278999


Q ss_pred             EccCCCChhhhhhhc----------------------------cCCC------------Ccee-------------EEEe
Q 048684          172 ELSPHGSLASLLYAK----------------------------WLPD------------KWTH-------------HIVS  198 (363)
Q Consensus       172 E~~~~gsL~~~l~~~----------------------------~~~~------------~~~~-------------~~~~  198 (363)
                      |||++|+|.+++...                            .+..            ....             ....
T Consensus        92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~  171 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  171 (270)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence            999999999887411                            0000            0000             0123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC-CcCCCCCCHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD-PTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li  277 (363)
                      ..+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+..........+..... +.+....++    .+.+|+
T Consensus       172 ~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~li  246 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP----EVKEII  246 (270)
T ss_dssp             ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH----HHHHHH
T ss_pred             CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCH----HHHHHH
Confidence            4579999999999865 6999999999999999999999999866544444444433332 222233344    489999


Q ss_pred             HHccccCCCCCCCHHHHHHH
Q 048684          278 SACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~  297 (363)
                      .+||+.||.+|||+.|++++
T Consensus       247 ~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         247 EGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             HHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHccCCHhHCcCHHHHhCC
Confidence            99999999999999999874

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.4e-38  Score=288.04  Aligned_cols=203  Identities=20%  Similarity=0.263  Sum_probs=150.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----  166 (363)
                      .++|++.+.||+|+||+||+|.. .+|+.||||.+....  .......|.+|+.+++.++|||||++++++....     
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            36799999999999999999985 679999999997543  3445678999999999999999999999776432     


Q ss_pred             eEEEEEccCCCChhhhhhhc-------------------------------cCCC------------------------C
Q 048684          167 MHLILELSPHGSLASLLYAK-------------------------------WLPD------------------------K  191 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-------------------------------~~~~------------------------~  191 (363)
                      .|+|||||++|+|.+++...                               ..|.                        .
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~  165 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  165 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccc
Confidence            68999999999998876411                               0000                        0


Q ss_pred             ceeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHH
Q 048684          192 WTHHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLT  271 (363)
Q Consensus       192 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (363)
                      .........+||+.|||||++.+..++.++|||||||++|||+||++||.+.......+..+.....+.  .......+.
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~  243 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP--SARHEGLSA  243 (277)
T ss_dssp             -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCG--GGTSSSCCH
T ss_pred             ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCC--chhccCCCH
Confidence            011123345799999999999999999999999999999999999999988766655555554433221  111122334


Q ss_pred             HHHHHHHHccccCCCCCC-CHHHHHHHhh
Q 048684          272 RLLLIASACINQTSACRP-QMSKVVQALR  299 (363)
Q Consensus       272 ~l~~li~~cl~~dP~~RP-t~~evl~~L~  299 (363)
                      .+.+++.+||+.||.+|| |+.+++..|.
T Consensus       244 ~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         244 DLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence            499999999999999999 7899887764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.1e-39  Score=302.25  Aligned_cols=199  Identities=14%  Similarity=0.152  Sum_probs=155.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+..... ...+.+.+|+.+|++++|||||++++++.+.+ +|+||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch-hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            5799999999999999999985 6799999999976543 33578999999999999999999999887766 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CCC--Ccee--------------EEEee
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LPD--KWTH--------------HIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~~--~~~~--------------~~~~~  199 (363)
                      |++|+|.+++....                                      +..  ....              .....
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~  184 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  184 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence            99999988874110                                      100  0000              01223


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..............  +........+..+.+|+.+
T Consensus       185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~  262 (350)
T d1koaa2         185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFIRK  262 (350)
T ss_dssp             ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCCGGGGGCCHHHHHHHHH
T ss_pred             ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHHH
Confidence            56999999999999999999999999999999999999999876654444433332221  1111122234458999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+|||+.|++++
T Consensus       263 ~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         263 LLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HCCSSGGGSCCHHHHHHS
T ss_pred             HccCChhHCcCHHHHhcC
Confidence            999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-38  Score=290.29  Aligned_cols=200  Identities=21%  Similarity=0.361  Sum_probs=149.4

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCc--EEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQ--FVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~--~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|+..++||+|+||+||+|.+ .+|.  .||||.+......+..+.|.+|+.+|.++ +|||||+++|++.+.+ .++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            5788889999999999999985 4454  57889887555444567899999999998 7999999999988776 8999


Q ss_pred             EEccCCCChhhhhhhcc-----------------CCC-------------------------------------------
Q 048684          171 LELSPHGSLASLLYAKW-----------------LPD-------------------------------------------  190 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-----------------~~~-------------------------------------------  190 (363)
                      ||||++|+|.++|+...                 ++.                                           
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence            99999999999874210                 000                                           


Q ss_pred             --Cce-----eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCC-CCCCCchhhHHHHHhhhhhcCCcCC
Q 048684          191 --KWT-----HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR-QALDSSQKSLVMWSSMKELVDPTLG  262 (363)
Q Consensus       191 --~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                        ...     ........||+.|+|||.+.++.|+.++|||||||++|||++|. +||.+.+....... +.....+..+
T Consensus       170 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~-i~~~~~~~~~  248 (309)
T d1fvra_         170 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKP  248 (309)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-GGGTCCCCCC
T ss_pred             cccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHH-HHhcCCCCCC
Confidence              000     00011235899999999999999999999999999999999976 56766654444333 3333444444


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          263 DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       263 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ...++    .+.+|+.+||+.||.+||||.+|++.|+.
T Consensus       249 ~~~~~----~~~~li~~cl~~dP~~RPs~~eil~~L~~  282 (309)
T d1fvra_         249 LNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNR  282 (309)
T ss_dssp             TTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            44444    49999999999999999999999998854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.6e-38  Score=297.01  Aligned_cols=199  Identities=16%  Similarity=0.167  Sum_probs=155.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+...... ....+.+|+.+|++++|||||++++++.+++ +||||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL-DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            5799999999999999999985 67999999999765433 3567889999999999999999999888766 8999999


Q ss_pred             cCCCChhhhhhhcc--------------------------------------CC--CCcee--------------EEEee
Q 048684          174 SPHGSLASLLYAKW--------------------------------------LP--DKWTH--------------HIVSK  199 (363)
Q Consensus       174 ~~~gsL~~~l~~~~--------------------------------------~~--~~~~~--------------~~~~~  199 (363)
                      |++|+|.+++....                                      +.  .....              .....
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~  187 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV  187 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceee
Confidence            99999987663110                                      00  00000              11234


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|||||++.+..|+.++|||||||++|||+||+.||.+................  ++.......+..+.+|+.+
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li~~  265 (352)
T d1koba_         188 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE--FDEDAFSSVSPEAKDFIKN  265 (352)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC--CCSSTTTTSCHHHHHHHHT
T ss_pred             ccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHHH
Confidence            56999999999999999999999999999999999999999887655554444333222  1222222334458999999


Q ss_pred             ccccCCCCCCCHHHHHHH
Q 048684          280 CINQTSACRPQMSKVVQA  297 (363)
Q Consensus       280 cl~~dP~~RPt~~evl~~  297 (363)
                      ||+.||.+|||+.|++++
T Consensus       266 ~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         266 LLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             TSCSSGGGSCCHHHHHTS
T ss_pred             HccCChhHCcCHHHHhcC
Confidence            999999999999999985

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-38  Score=287.67  Aligned_cols=208  Identities=22%  Similarity=0.342  Sum_probs=158.2

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYG  162 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~  162 (363)
                      .++...++|++.++||+|+||+||+|...      +++.||||.+.........+.+.+|+.++.++ +|+|||.+++++
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            33344578999999999999999999842      24689999998766665677899999988887 689999999988


Q ss_pred             EcCC--eEEEEEccCCCChhhhhhhccC-----------------C----------------------------------
Q 048684          163 VEGG--MHLILELSPHGSLASLLYAKWL-----------------P----------------------------------  189 (363)
Q Consensus       163 ~~~~--~~lv~E~~~~gsL~~~l~~~~~-----------------~----------------------------------  189 (363)
                      ...+  +++|||||++|+|.++|.....                 +                                  
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NIL  166 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  166 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcccee
Confidence            7543  7999999999999998742110                 0                                  


Q ss_pred             --CCc-----------------eeEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhC-CCCCCCchhhHHH
Q 048684          190 --DKW-----------------THHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITG-RQALDSSQKSLVM  249 (363)
Q Consensus       190 --~~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG-~~P~~~~~~~~~~  249 (363)
                        ...                 ........+||+.|||||++.+..++.++|||||||++|||+|| .+||.+.......
T Consensus       167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~  246 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  246 (299)
T ss_dssp             ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence              000                 00011224699999999999999999999999999999999997 5678766555555


Q ss_pred             HHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          250 WSSMKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      ...+.....+..+...+++    +.+++.+||+.||.+|||+.+|+++|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~----l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         247 CRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             HHHHHHTCCCCCCTTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCccCCHH----HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            5555555555555555555    89999999999999999999999998643

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=286.57  Aligned_cols=196  Identities=22%  Similarity=0.339  Sum_probs=146.2

Q ss_pred             CCcccccCceEEEEEEEcC--C--cEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--CeEEEEEcc
Q 048684          101 ENLIGQGGYAEVYKGQLED--G--QFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--GMHLILELS  174 (363)
Q Consensus       101 ~~~lG~G~fg~Vy~~~~~~--g--~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~lv~E~~  174 (363)
                      .++||+|+||+||+|.+.+  +  ..||||.++........+.|.+|+++|++++|||||+++|++.+.  ..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            3679999999999998643  2  369999998666666678899999999999999999999988753  378999999


Q ss_pred             CCCChhhhhhhcc--------------------------------------CCCCceeE-------------------EE
Q 048684          175 PHGSLASLLYAKW--------------------------------------LPDKWTHH-------------------IV  197 (363)
Q Consensus       175 ~~gsL~~~l~~~~--------------------------------------~~~~~~~~-------------------~~  197 (363)
                      ++|+|.+++....                                      +.......                   ..
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~  191 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK  191 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence            9999998775111                                      00000000                   11


Q ss_pred             eecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHH
Q 048684          198 SKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIA  277 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  277 (363)
                      ....||+.|+|||++.++.++.++|||||||++|||+||..||............+.....+..+...+.    .+.+|+
T Consensus       192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~----~l~~li  267 (311)
T d1r0pa_         192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVM  267 (311)
T ss_dssp             TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCH----HHHHHH
T ss_pred             ccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcH----HHHHHH
Confidence            1235889999999999999999999999999999999988887654332222222333333333333444    489999


Q ss_pred             HHccccCCCCCCCHHHHHHHhhc
Q 048684          278 SACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       278 ~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      .+||+.||.+||||.||+++|+.
T Consensus       268 ~~cl~~dP~~RPs~~ei~~~L~~  290 (311)
T d1r0pa_         268 LKCWHPKAEMRPSFSELVSRISA  290 (311)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999999998853

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-37  Score=288.11  Aligned_cols=196  Identities=19%  Similarity=0.266  Sum_probs=154.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++....  .....+.+.+|+.+|+.++|||||++++++.+++ .|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4699999999999999999995 679999999986432  1223578999999999999999999999888766 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCc------------eeEEEeeccc
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKW------------THHIVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~------------~~~~~~~~~g  202 (363)
                      |||+||+|..++....                                     +....            .......++|
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G  163 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  163 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccC
Confidence            9999999987764110                                     00000            0111235679


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|||||++.+..|+.++|||||||++|||+||+.||.+.+............  ..++...+.+    +.+++.+||+
T Consensus       164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~----~~~li~~~L~  237 (316)
T d1fota_         164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNED----VKDLLSRLIT  237 (316)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHH----HHHHHHHHTC
T ss_pred             cccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC--CCCCCCCCHH----HHHHHHHHhh
Confidence            999999999999999999999999999999999999998876655544444332  2233334444    8999999999


Q ss_pred             cCCCCCC-----CHHHHHHH
Q 048684          283 QTSACRP-----QMSKVVQA  297 (363)
Q Consensus       283 ~dP~~RP-----t~~evl~~  297 (363)
                      .||.+|+     |+.+++++
T Consensus       238 ~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         238 RDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             SCTTTCTTSSTTTTHHHHTS
T ss_pred             hCHHhccccchhhHHHHHcC
Confidence            9999996     89999975

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=287.41  Aligned_cols=203  Identities=21%  Similarity=0.351  Sum_probs=157.0

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc------CCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE------DGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-  166 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-  166 (363)
                      ..++|...+.||+|+||+||+|.+.      ++..||||+++..........|.+|+.++++++|||||+++|++...+ 
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            3478899999999999999999853      357899999987665555678999999999999999999999887655 


Q ss_pred             eEEEEEccCCCChhhhhhhc-----------------------------------------------cCCCCcee-----
Q 048684          167 MHLILELSPHGSLASLLYAK-----------------------------------------------WLPDKWTH-----  194 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~-----------------------------------------------~~~~~~~~-----  194 (363)
                      .++|||||++|+|.+++...                                               .+......     
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DF  177 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  177 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeec
Confidence            89999999999999886410                                               00000000     


Q ss_pred             ------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCC-CCCCCchhhHHHHHhhhhhcCCcC
Q 048684          195 ------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGR-QALDSSQKSLVMWSSMKELVDPTL  261 (363)
Q Consensus       195 ------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                                  .......||+.|+|||.+.++.++.++|||||||++|||+||. +||.+............. ..+..
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-~~~~~  256 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-GLLDK  256 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-CCCCC
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence                        0112235899999999999999999999999999999999985 777766554444333332 22333


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +...+.    .+.+|+.+||+.||.+|||+.+|+++|+..
T Consensus       257 p~~~~~----~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         257 PDNCPD----MLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             CTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             cccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            344444    499999999999999999999999998654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-37  Score=288.30  Aligned_cols=198  Identities=17%  Similarity=0.239  Sum_probs=156.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||++.+..  .....+.+.+|+.+|++++|||||++++++.+.+ +|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5799999999999999999985 679999999997432  1223577899999999999999999999888776 89999


Q ss_pred             EccCCCChhhhhhhcc-------------------------------------CCCCc---------------eeEEEee
Q 048684          172 ELSPHGSLASLLYAKW-------------------------------------LPDKW---------------THHIVSK  199 (363)
Q Consensus       172 E~~~~gsL~~~l~~~~-------------------------------------~~~~~---------------~~~~~~~  199 (363)
                      |||++|+|.+++....                                     +....               .......
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~  164 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  164 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCccccc
Confidence            9999999988875110                                     00000               0112334


Q ss_pred             cccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHH
Q 048684          200 IEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASA  279 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  279 (363)
                      .+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+............  +.++...+++    +.+||.+
T Consensus       165 ~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~--~~~p~~~s~~----~~dli~~  238 (337)
T d1o6la_         165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPE----AKSLLAG  238 (337)
T ss_dssp             CEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHH----HHHHHHH
T ss_pred             ceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC--CCCCccCCHH----HHHHHHh
Confidence            689999999999999999999999999999999999999999877655444333332  3334444544    8999999


Q ss_pred             ccccCCCCCCC-----HHHHHHHhh
Q 048684          280 CINQTSACRPQ-----MSKVVQALR  299 (363)
Q Consensus       280 cl~~dP~~RPt-----~~evl~~L~  299 (363)
                      ||+.||.+||+     +.+++++-.
T Consensus       239 ~L~~dP~~R~~~~~~~~~eil~Hp~  263 (337)
T d1o6la_         239 LLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             HTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             hccCCchhhcccccccHHHHHcCcc
Confidence            99999999995     888887533

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=284.98  Aligned_cols=203  Identities=23%  Similarity=0.369  Sum_probs=154.6

Q ss_pred             hcCCCccCCcccccCceEEEEEEEc-C-------CcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEc
Q 048684           94 ATDNFSHENLIGQGGYAEVYKGQLE-D-------GQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVE  164 (363)
Q Consensus        94 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~-------g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~  164 (363)
                      ..++|++.+.||+|+||.||+|+.. .       +..||||.+...........+.+|+..+.++ +|||||++++++.+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            3468999999999999999999842 2       3479999998777666678899999999988 79999999999987


Q ss_pred             CC-eEEEEEccCCCChhhhhhhccCC-----------------------------------------------------C
Q 048684          165 GG-MHLILELSPHGSLASLLYAKWLP-----------------------------------------------------D  190 (363)
Q Consensus       165 ~~-~~lv~E~~~~gsL~~~l~~~~~~-----------------------------------------------------~  190 (363)
                      ++ .++|||||++|+|.++|......                                                     .
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~  170 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  170 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC
Confidence            66 89999999999999988422100                                                     0


Q ss_pred             Ccee-----------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHh-CCCCCCCchhhHHHHHh
Q 048684          191 KWTH-----------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIIT-GRQALDSSQKSLVMWSS  252 (363)
Q Consensus       191 ~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~  252 (363)
                      ....                 ......+||+.|+|||++.++.|+.++|||||||++|||+| |.+||.+...... +..
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~-~~~  249 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-FKL  249 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHH
T ss_pred             CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH-HHH
Confidence            0000                 00112358899999999999999999999999999999998 7888876655443 344


Q ss_pred             hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhcC
Q 048684          253 MKELVDPTLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALRGD  301 (363)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~  301 (363)
                      +.....+..+...+.+    +.+|+.+||+.||.+|||+.+|++.|+.+
T Consensus       250 i~~~~~~~~p~~~~~~----l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         250 LKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHTTCCCCCCSSCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCccchHH----HHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            4444555555555554    99999999999999999999999998643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-37  Score=287.52  Aligned_cols=196  Identities=18%  Similarity=0.302  Sum_probs=151.5

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHH-hCCCCCcceEEEEEEcCC-eEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIV-HVDHPNIAKMIGYGVEGG-MHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~-~~lv  170 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||++.+..  .....+.+..|+.++. .++|||||++++++.+++ .|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5799999999999999999985 579999999996432  1223566778887765 689999999999988777 8999


Q ss_pred             EEccCCCChhhhhhhcc-------------------------------------CCCCc---------------eeEEEe
Q 048684          171 LELSPHGSLASLLYAKW-------------------------------------LPDKW---------------THHIVS  198 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~~~-------------------------------------~~~~~---------------~~~~~~  198 (363)
                      ||||++|+|.+++....                                     +....               ......
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~  161 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN  161 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccccccc
Confidence            99999999999885110                                     00000               001122


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||++.+..|+.++|||||||++|||+||+.||.+.+...........  .+.++...+++    +.+|+.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~----~~dli~  235 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEKE----AKDLLV  235 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHH----HHHHHH
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCccCCHH----HHHHHH
Confidence            356999999999999999999999999999999999999999887655544443322  33444444444    999999


Q ss_pred             HccccCCCCCCCHH-HHHHH
Q 048684          279 ACINQTSACRPQMS-KVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~-evl~~  297 (363)
                      +||+.||.+|||+. +++++
T Consensus       236 ~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         236 KLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             HHSCSSGGGSBTTBSCGGGS
T ss_pred             HhcccCCCCCcCHHHHHHhC
Confidence            99999999999995 78763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-37  Score=283.97  Aligned_cols=199  Identities=14%  Similarity=0.143  Sum_probs=154.7

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      .++|.+.+.||+|+||+||+|.. .+|+.||||.+.....+  ...+.+|+.+|+.++|||||++++++.+.+ +|+|||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~--~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--QVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH--HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc--HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            46899999999999999999985 57899999999765433  356889999999999999999999887665 899999


Q ss_pred             ccCCCChhhhhhhcc--CCC------------------------------------Cc--e--------------eEEEe
Q 048684          173 LSPHGSLASLLYAKW--LPD------------------------------------KW--T--------------HHIVS  198 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~--~~~------------------------------------~~--~--------------~~~~~  198 (363)
                      ||+||+|.++|....  +++                                    ..  .              .....
T Consensus        82 ~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~  161 (321)
T d1tkia_          82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCccc
Confidence            999999998885211  000                                    00  0              01123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIAS  278 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  278 (363)
                      ..+||+.|+|||.+.+..|+.++|||||||++|+|++|.+||.+.................  +.......+..+.+|+.
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li~  239 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHHH
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--ChhhccCCCHHHHHHHH
Confidence            3469999999999999999999999999999999999999998876655554444332211  11011122345899999


Q ss_pred             HccccCCCCCCCHHHHHHH
Q 048684          279 ACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       279 ~cl~~dP~~RPt~~evl~~  297 (363)
                      +||+.||.+|||+.|++++
T Consensus       240 ~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         240 RLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHS
T ss_pred             HHccCChhHCcCHHHHhcC
Confidence            9999999999999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.9e-36  Score=272.41  Aligned_cols=200  Identities=19%  Similarity=0.259  Sum_probs=154.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--------hhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--------EEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~  165 (363)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++.....        ....+.+.+|+.++.+++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6899999999999999999985 6799999999975432        123456889999999997 99999999998877


Q ss_pred             C-eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCcee-------------
Q 048684          166 G-MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTH-------------  194 (363)
Q Consensus       166 ~-~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~-------------  194 (363)
                      + .|||||||++|+|.++|....                                     +......             
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence            7 899999999999999885110                                     0000000             


Q ss_pred             -EEEeecccccCCCCchhhcc------CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCH
Q 048684          195 -HIVSKIEGTFGYLPPEFFMH------GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNT  267 (363)
Q Consensus       195 -~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (363)
                       ......+||+.|+|||++.+      ..++.++||||+||++|||+||+.||.+.................  ......
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~  240 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF--GSPEWD  240 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTTGG
T ss_pred             CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCC--CCcccc
Confidence             01234569999999999963      357899999999999999999999999877665555544443321  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          268 EQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       268 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+..+.+|+.+||+.||.+|||+.|++++
T Consensus       241 ~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            344559999999999999999999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-36  Score=283.39  Aligned_cols=197  Identities=18%  Similarity=0.207  Sum_probs=154.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC--chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS--PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLIL  171 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~  171 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||++....  .....+.+.+|+.+|+.++|||||++++++.+.. .++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5799999999999999999985 579999999986432  1233567899999999999999999999888766 78999


Q ss_pred             EccCCCChhhhhhhc-------------------------------------cCCCCcee------------EEEeeccc
Q 048684          172 ELSPHGSLASLLYAK-------------------------------------WLPDKWTH------------HIVSKIEG  202 (363)
Q Consensus       172 E~~~~gsL~~~l~~~-------------------------------------~~~~~~~~------------~~~~~~~g  202 (363)
                      ||+.+|+|..++...                                     .+......            ......+|
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~G  200 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG  200 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEE
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccC
Confidence            999999998877411                                     00000000            11234579


Q ss_pred             ccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHHHHHHHHccc
Q 048684          203 TFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRLLLIASACIN  282 (363)
Q Consensus       203 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  282 (363)
                      |+.|||||++.+..|+.++|||||||++|||+||+.||.+..............  +..+...+++    +.+++.+||+
T Consensus       201 t~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~----~~~li~~~L~  274 (350)
T d1rdqe_         201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSD----LKDLLRNLLQ  274 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTCCHH----HHHHHHHHSC
T ss_pred             ccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC--CCCCccCCHH----HHHHHHHHhh
Confidence            999999999999999999999999999999999999998876554444443332  2233344444    9999999999


Q ss_pred             cCCCCCC-----CHHHHHHHh
Q 048684          283 QTSACRP-----QMSKVVQAL  298 (363)
Q Consensus       283 ~dP~~RP-----t~~evl~~L  298 (363)
                      .||.+|+     |+.+++++-
T Consensus       275 ~dP~kR~~~~r~t~~ell~Hp  295 (350)
T d1rdqe_         275 VDLTKRFGNLKNGVNDIKNHK  295 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSG
T ss_pred             hCHHhccccccccHHHHHcCc
Confidence            9999994     899999853

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=282.74  Aligned_cols=196  Identities=14%  Similarity=0.170  Sum_probs=143.5

Q ss_pred             CCCccCC-cccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEc-----CCe
Q 048684           96 DNFSHEN-LIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHV-DHPNIAKMIGYGVE-----GGM  167 (363)
Q Consensus        96 ~~f~~~~-~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-----~~~  167 (363)
                      ++|.+.+ +||+|+||+||+|.. .+|+.||||.+..      ...+.+|+.++.++ +|||||++++++.+     ..+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            5788764 699999999999985 6799999999864      24577899987655 89999999998754     237


Q ss_pred             EEEEEccCCCChhhhhhhcc---------------------------------------CCC---Cce------------
Q 048684          168 HLILELSPHGSLASLLYAKW---------------------------------------LPD---KWT------------  193 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~l~~~~---------------------------------------~~~---~~~------------  193 (363)
                      |+|||||+||+|.++|....                                       +..   ...            
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeec
Confidence            99999999999999885210                                       000   000            


Q ss_pred             --eEEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC--cCCCCCCHHH
Q 048684          194 --HHIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP--TLGDAYNTEQ  269 (363)
Q Consensus       194 --~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  269 (363)
                        .......+||+.|||||++.+..|+.++|||||||+||+|+||++||.+.................  .++.......
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  244 (335)
T d2ozaa1         165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  244 (335)
T ss_dssp             CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred             cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence              001123469999999999999999999999999999999999999997654433222221111111  1112122345


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      +..+.+|+.+||+.||.+|||+.|++++
T Consensus       245 s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         245 SEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            5679999999999999999999999974

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.6e-36  Score=281.03  Aligned_cols=199  Identities=23%  Similarity=0.310  Sum_probs=144.8

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc--hhHHHHHH---HHHHHHHhCCCCCcceEEEEEEcCC-eE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP--EEMTTDYL---SELGIIVHVDHPNIAKMIGYGVEGG-MH  168 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~-~~  168 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||++.....  ......+.   .|+.+++.++|||||++++++.+.+ +|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            6899999999999999999995 5799999999863221  11122333   4467777889999999999888766 89


Q ss_pred             EEEEccCCCChhhhhhhcc-------------------------------------CCCCce-------------eEEEe
Q 048684          169 LILELSPHGSLASLLYAKW-------------------------------------LPDKWT-------------HHIVS  198 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~-------------~~~~~  198 (363)
                      +|||||++|+|.++|....                                     +.....             .....
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~  163 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  163 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccc
Confidence            9999999999999875110                                     000000             00123


Q ss_pred             ecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHH-HhhhhhcCCcCCCCCCHHHHHHHHHH
Q 048684          199 KIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMW-SSMKELVDPTLGDAYNTEQLTRLLLI  276 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l  276 (363)
                      ..+||+.|||||++.. ..|+.++|||||||+||||+||+.||.+........ ........+.++..++++    +.+|
T Consensus       164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----~~~l  239 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE----LRSL  239 (364)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHH----HHHH
T ss_pred             ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHH----HHHH
Confidence            3579999999999975 468999999999999999999999998654322211 111111222333344544    9999


Q ss_pred             HHHccccCCCCCCC-----HHHHHHHh
Q 048684          277 ASACINQTSACRPQ-----MSKVVQAL  298 (363)
Q Consensus       277 i~~cl~~dP~~RPt-----~~evl~~L  298 (363)
                      |.+||+.||.+|||     +.+++++-
T Consensus       240 i~~~L~~dP~~R~t~~~~~a~eil~Hp  266 (364)
T d1omwa3         240 LEGLLQRDVNRRLGCLGRGAQEVKESP  266 (364)
T ss_dssp             HHHHTCSSTTTSTTTSSSTHHHHHTSG
T ss_pred             HHHHcccCHHHhCCCcccCHHHHHcCc
Confidence            99999999999999     68888753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=280.39  Aligned_cols=199  Identities=21%  Similarity=0.316  Sum_probs=142.1

Q ss_pred             CCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHH--HHHHHhCCCCCcceEEEEEEcCC-----eEE
Q 048684           97 NFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSE--LGIIVHVDHPNIAKMIGYGVEGG-----MHL  169 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E--~~~l~~l~H~niv~l~~~~~~~~-----~~l  169 (363)
                      +|...+.||+|+||+||+|++ +|+.||||.+....    ...+..|  +..+..++|||||+++|+|.+.+     +++
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            566778899999999999997 58999999986432    2344444  44556789999999999887542     689


Q ss_pred             EEEccCCCChhhhhhhccCC--------------------------------------------CCceeE----------
Q 048684          170 ILELSPHGSLASLLYAKWLP--------------------------------------------DKWTHH----------  195 (363)
Q Consensus       170 v~E~~~~gsL~~~l~~~~~~--------------------------------------------~~~~~~----------  195 (363)
                      |||||++|+|.++|....++                                            .+....          
T Consensus        79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             EEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence            99999999999988621110                                            000000          


Q ss_pred             ---------EEeecccccCCCCchhhccC------CCCccceEEechhHHHHHHhCCCCCCCch---------------h
Q 048684          196 ---------IVSKIEGTFGYLPPEFFMHG------IADEKTDVYAYGVLLLEIITGRQALDSSQ---------------K  245 (363)
Q Consensus       196 ---------~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG~~P~~~~~---------------~  245 (363)
                               .....+||+.|||||++.+.      .++.++|||||||+||||+||.+||....               .
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence                     11234699999999998754      36889999999999999999998874321               1


Q ss_pred             hHHHHHhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhhc
Q 048684          246 SLVMWSSMKELVDPTLGDAY-NTEQLTRLLLIASACINQTSACRPQMSKVVQALRG  300 (363)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~  300 (363)
                      ............+|.++..+ +.+....+.+|+.+||+.||.+|||+.||++.|+.
T Consensus       239 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            11111222334444443332 23456679999999999999999999999998863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-35  Score=270.74  Aligned_cols=198  Identities=18%  Similarity=0.249  Sum_probs=140.5

Q ss_pred             cCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch----hHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684          100 HENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE----EMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus       100 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      .+++||+|+||+||+|.. .+|+.||||++......    ...+.+.+|+.+|++++|||||++++++..++ .|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            356899999999999994 67999999998654321    22356889999999999999999999888766 8999999


Q ss_pred             cCCCChhhhhhhc-cCC------------------------------------CC---------------ceeEEEeecc
Q 048684          174 SPHGSLASLLYAK-WLP------------------------------------DK---------------WTHHIVSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~-~~~------------------------------------~~---------------~~~~~~~~~~  201 (363)
                      |.+|++..++... .++                                    ..               .........+
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~  161 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV  161 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccccee
Confidence            9988776554310 000                                    00               0001122346


Q ss_pred             cccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC-----------------C
Q 048684          202 GTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG-----------------D  263 (363)
Q Consensus       202 gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-----------------~  263 (363)
                      ||+.|+|||++... .|+.++|||||||++|||+||.+||.+................+...                 .
T Consensus       162 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ua2a_         162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP  241 (299)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred             cChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCC
Confidence            99999999998755 58999999999999999999999998766544443332221111000                 0


Q ss_pred             CCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          264 AYN-----TEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       264 ~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..+     ......+.+|+.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            000     1123568999999999999999999999975

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.7e-35  Score=266.70  Aligned_cols=202  Identities=16%  Similarity=0.233  Sum_probs=146.3

Q ss_pred             CCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEEc
Q 048684           96 DNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILEL  173 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E~  173 (363)
                      ++|...++||+|+||+||+|...+|+.||||++..... +...+.+.+|+.+|++++|||||++++++...+ .+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            57999999999999999999988899999999975442 333578999999999999999999999887766 8899999


Q ss_pred             cCCCChhhhhhhc-------------------------------c------CCCCce---------------eEEEeecc
Q 048684          174 SPHGSLASLLYAK-------------------------------W------LPDKWT---------------HHIVSKIE  201 (363)
Q Consensus       174 ~~~gsL~~~l~~~-------------------------------~------~~~~~~---------------~~~~~~~~  201 (363)
                      +.++.+..+....                               .      +.....               ........
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~  161 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceec
Confidence            9887665554310                               0      000000               00112335


Q ss_pred             cccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCC------------------
Q 048684          202 GTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLG------------------  262 (363)
Q Consensus       202 gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~------------------  262 (363)
                      |++.|+|||.+.+. .++.++|||||||++|||++|+.||.+................+...                  
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T d1ob3a_         162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (286)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             ccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccc
Confidence            89999999999754 57999999999999999999999998765444433322211111000                  


Q ss_pred             -----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 -----DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 -----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                           .......+..+.+++.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 00111223458899999999999999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-35  Score=267.49  Aligned_cols=202  Identities=17%  Similarity=0.252  Sum_probs=144.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSP-EEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||+||+|.. .+|+.||||++..... +.....+.+|+.+|++++|||||++++++.+++ .|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999995 6799999999965432 233568999999999999999999999888776 899999


Q ss_pred             ccCCCChhhhhh--------------------------hcc------------CCCCcee---------------EEEee
Q 048684          173 LSPHGSLASLLY--------------------------AKW------------LPDKWTH---------------HIVSK  199 (363)
Q Consensus       173 ~~~~gsL~~~l~--------------------------~~~------------~~~~~~~---------------~~~~~  199 (363)
                      ||.++.+.....                          ...            +......               .....
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~  161 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  161 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCccccee
Confidence            998653332211                          000            0000000               01122


Q ss_pred             cccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcC----------------C
Q 048684          200 IEGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTL----------------G  262 (363)
Q Consensus       200 ~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----------------~  262 (363)
                      .+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+.....+........+.-                .
T Consensus       162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP  241 (298)
T ss_dssp             CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred             ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccc
Confidence            36999999999987765 589999999999999999999999877655444443222111100                0


Q ss_pred             CC--C-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          263 DA--Y-----NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       263 ~~--~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ..  .     ....+..+.+|+.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00  0     01123568999999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=266.54  Aligned_cols=203  Identities=17%  Similarity=0.274  Sum_probs=141.5

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cC-CcEEEEEEecCCCc-hhHHHHHHHHHHHHHhC---CCCCcceEEEEEEc----
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-ED-GQFVAIKRLTRGSP-EEMTTDYLSELGIIVHV---DHPNIAKMIGYGVE----  164 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~-g~~vAvK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~----  164 (363)
                      .++|++.+.||+|+||+||+|.. .+ ++.||||.+..... +.....+.+|+.+|+.+   +|||||++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999985 44 67899999864321 12223566777776665   89999999998753    


Q ss_pred             --CCeEEEEEccCCCChhhhhh--------------------------hcc------------CCCCcee----------
Q 048684          165 --GGMHLILELSPHGSLASLLY--------------------------AKW------------LPDKWTH----------  194 (363)
Q Consensus       165 --~~~~lv~E~~~~gsL~~~l~--------------------------~~~------------~~~~~~~----------  194 (363)
                        ...+++||||.+|.+.....                          ...            +......          
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence              12789999999876643321                          000            0000000          


Q ss_pred             ----EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc----------
Q 048684          195 ----HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT----------  260 (363)
Q Consensus       195 ----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------  260 (363)
                          ......+||+.|||||++.+..|+.++|||||||++|||+||++||.+................+.          
T Consensus       166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (305)
T d1blxa_         166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  245 (305)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred             hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccc
Confidence                011234699999999999999999999999999999999999999987655443333221111000          


Q ss_pred             -----------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          261 -----------LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       261 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                 ....+.......+.+|+.+||+.||.+|||+.|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                       0000111233458899999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-35  Score=266.29  Aligned_cols=191  Identities=18%  Similarity=0.342  Sum_probs=143.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCch-----hHHHHHHHHHHHHHhCC--CCCcceEEEEEEcCC-
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPE-----EMTTDYLSELGIIVHVD--HPNIAKMIGYGVEGG-  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~-----~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~-  166 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||.+......     .....+.+|+.+|++++  |||||++++++.+++ 
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999985 67999999998643211     11234678999999996  899999999988766 


Q ss_pred             eEEEEEccCC-CChhhhhhhc-------------------------------------cCC-CCce-------------e
Q 048684          167 MHLILELSPH-GSLASLLYAK-------------------------------------WLP-DKWT-------------H  194 (363)
Q Consensus       167 ~~lv~E~~~~-gsL~~~l~~~-------------------------------------~~~-~~~~-------------~  194 (363)
                      .++||||+.+ +++.+++...                                     .+. ....             .
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence            8999999986 5666665310                                     000 0000             0


Q ss_pred             EEEeecccccCCCCchhhccCCC-CccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCcCCCCCCHHHHHHH
Q 048684          195 HIVSKIEGTFGYLPPEFFMHGIA-DEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPTLGDAYNTEQLTRL  273 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  273 (363)
                      ......+||+.|||||++.+..+ +.++|||||||++|||+||+.||.....      ....  ...++...+.    .+
T Consensus       164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~~--~~~~~~~~s~----~~  231 (273)
T d1xwsa_         164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG--QVFFRQRVSS----EC  231 (273)
T ss_dssp             SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC--CCCCSSCCCH----HH
T ss_pred             ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH------Hhhc--ccCCCCCCCH----HH
Confidence            11234579999999999987765 6789999999999999999999986432      1111  1223333444    49


Q ss_pred             HHHHHHccccCCCCCCCHHHHHHHh
Q 048684          274 LLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       274 ~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                      .+|+.+||+.||.+|||+.|++++-
T Consensus       232 ~~li~~~L~~dp~~R~s~~eil~hp  256 (273)
T d1xwsa_         232 QHLIRWCLALRPSDRPTFEEIQNHP  256 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             HHHHHHHccCCHhHCcCHHHHhcCH
Confidence            9999999999999999999999853

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=268.68  Aligned_cols=203  Identities=16%  Similarity=0.194  Sum_probs=145.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----eE
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-----MH  168 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~  168 (363)
                      +++|.+++.||+|+||+||+|.. .+|+.||||++.........+.+.+|+.+|++++|||||++++++....     .+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45799999999999999999984 6799999999986665666778999999999999999999999886543     35


Q ss_pred             EEEEccCCCChhhhhhhccCCCC------------------------------------cee------------------
Q 048684          169 LILELSPHGSLASLLYAKWLPDK------------------------------------WTH------------------  194 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~~~~~~~~------------------------------------~~~------------------  194 (363)
                      ++++|+.+|+|.+++....++..                                    ...                  
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~  166 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  166 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc
Confidence            66777889999998852211110                                    000                  


Q ss_pred             EEEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC---------------
Q 048684          195 HIVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD---------------  258 (363)
Q Consensus       195 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~---------------  258 (363)
                      ......+||+.|+|||++.. ..++.++||||+||++|||++|+.||.........+........               
T Consensus       167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (345)
T d1pmea_         167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR  246 (345)
T ss_dssp             CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHH
T ss_pred             eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhh
Confidence            01123459999999999854 56799999999999999999999999876543332222111100               


Q ss_pred             ------CcCCC-CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          259 ------PTLGD-AY---NTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       259 ------~~~~~-~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                            +.... .+   .......+.+|+.+||+.||..|||+.+++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  00000 00   01122458899999999999999999999975

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-34  Score=266.88  Aligned_cols=202  Identities=19%  Similarity=0.236  Sum_probs=140.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG------  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------  166 (363)
                      .++|+..+.||+|+||+||+|.. .+|+.||||++.... .+...+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46899999999999999999985 679999999997543 3445678999999999999999999999887543      


Q ss_pred             -eEEEEEccCCCChhhhhhhccCCC------------------------------------Cc------------eeEEE
Q 048684          167 -MHLILELSPHGSLASLLYAKWLPD------------------------------------KW------------THHIV  197 (363)
Q Consensus       167 -~~lv~E~~~~gsL~~~l~~~~~~~------------------------------------~~------------~~~~~  197 (363)
                       +|+||||| +++|..++....++.                                    ..            .....
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~  175 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM  175 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC
T ss_pred             eEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCcc
Confidence             68999999 456666553111100                                    00            00012


Q ss_pred             eecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------------------
Q 048684          198 SKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------------------  258 (363)
Q Consensus       198 ~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------------------  258 (363)
                      ...+||+.|+|||++.+. .++.++||||+||++|||++|++||.+.+..............                  
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM  255 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhh
Confidence            335699999999999764 5799999999999999999999999876543332221110000                  


Q ss_pred             ---CcCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          259 ---PTLG----DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       259 ---~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                         +...    ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         256 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence               0000    00111223458899999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=264.83  Aligned_cols=204  Identities=17%  Similarity=0.159  Sum_probs=142.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------C
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG-------G  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------~  166 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||++.... .......+.+|+.+|++++|||||++++++...       .
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            6799999999999999999985 579999999997543 344456789999999999999999999988532       3


Q ss_pred             eEEEEEccCCCChhhhhh----------------------hc------c------CCCCc--------------eeEEEe
Q 048684          167 MHLILELSPHGSLASLLY----------------------AK------W------LPDKW--------------THHIVS  198 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~----------------------~~------~------~~~~~--------------~~~~~~  198 (363)
                      .|+|||||.++.+..+..                      ..      .      +....              ......
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~  176 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT  176 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccc
Confidence            789999998765433221                      00      0      00000              011123


Q ss_pred             ecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcC------------------C-
Q 048684          199 KIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVD------------------P-  259 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~------------------~-  259 (363)
                      ..+||+.|+|||++.+..+++++||||+||++|||++|++||.+.+........+.....                  . 
T Consensus       177 ~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (355)
T d2b1pa1         177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR  256 (355)
T ss_dssp             ----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTS
T ss_pred             cccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcC
Confidence            346999999999999999999999999999999999999999866543322221110000                  0 


Q ss_pred             --------------cC-C--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          260 --------------TL-G--DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       260 --------------~~-~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                    .. .  .......+..+.+|+.+||+.||.+|||+.|++++-+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw  313 (355)
T d2b1pa1         257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  313 (355)
T ss_dssp             CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             ccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence                          00 0  0011234667899999999999999999999998643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.9e-33  Score=259.04  Aligned_cols=204  Identities=17%  Similarity=0.226  Sum_probs=143.0

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--------
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG--------  165 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------  165 (363)
                      ++|++.++||+|+||+||+|.. .+|+.||||++.... .+.....+.+|+.+|++++||||+++++++...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            6899999999999999999995 679999999986443 233456789999999999999999999976542        


Q ss_pred             -CeEEEEEccCCCChhhhhh-------------------------h------cc------CCCC---------ce-----
Q 048684          166 -GMHLILELSPHGSLASLLY-------------------------A------KW------LPDK---------WT-----  193 (363)
Q Consensus       166 -~~~lv~E~~~~gsL~~~l~-------------------------~------~~------~~~~---------~~-----  193 (363)
                       ..++|||||.++.+..+..                         .      ..      +...         ..     
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence             3789999998876644322                         0      00      0000         00     


Q ss_pred             -----eEEEeecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh--cCCcCCCC-
Q 048684          194 -----HHIVSKIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL--VDPTLGDA-  264 (363)
Q Consensus       194 -----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~~-  264 (363)
                           .......+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+..............  .++..... 
T Consensus       170 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (318)
T d3blha1         170 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV  249 (318)
T ss_dssp             -----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTC
T ss_pred             ccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhcccc
Confidence                 0011224699999999999765 68999999999999999999999998765433322221111  11111000 


Q ss_pred             ----------------CCH-------HHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          265 ----------------YNT-------EQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       265 ----------------~~~-------~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                                      ...       .....+.+|+.+||+.||.+|||+.|++++-.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf  307 (318)
T d3blha1         250 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  307 (318)
T ss_dssp             CCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             chhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence                            000       11235778999999999999999999998644

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-33  Score=264.16  Aligned_cols=204  Identities=15%  Similarity=0.204  Sum_probs=148.8

Q ss_pred             cCCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------C
Q 048684           95 TDNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEG------G  166 (363)
Q Consensus        95 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~  166 (363)
                      +++|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+|++++|||||++++++...      .
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            57899999999999999999984 679999999997543 334456789999999999999999999987532      2


Q ss_pred             eEEEEEccCCCChhhhhhhccCCCCce------------------------------------e------------EEEe
Q 048684          167 MHLILELSPHGSLASLLYAKWLPDKWT------------------------------------H------------HIVS  198 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~~~~~~~------------------------------------~------------~~~~  198 (363)
                      .+++|+|+.+|+|.+++....++....                                    .            ....
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~  176 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT  176 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGS
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccc
Confidence            567888899999999875221111000                                    0            0011


Q ss_pred             ecccccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCC------------------
Q 048684          199 KIEGTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDP------------------  259 (363)
Q Consensus       199 ~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~------------------  259 (363)
                      ...||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..............+                  
T Consensus       177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  256 (348)
T d2gfsa1         177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  256 (348)
T ss_dssp             SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHT
T ss_pred             cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhh
Confidence            23588999999987765 46899999999999999999999998765444333322211111                  


Q ss_pred             ---cCCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHh
Q 048684          260 ---TLGDAY----NTEQLTRLLLIASACINQTSACRPQMSKVVQAL  298 (363)
Q Consensus       260 ---~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L  298 (363)
                         ......    .......+.+|+.+||+.||.+|||+.|++++-
T Consensus       257 ~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp  302 (348)
T d2gfsa1         257 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  302 (348)
T ss_dssp             TSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             hcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence               000000    011234588999999999999999999999853

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.3e-32  Score=252.55  Aligned_cols=196  Identities=19%  Similarity=0.222  Sum_probs=138.1

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEE-EEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIG-YGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~-~~lv~E  172 (363)
                      ++|++.+.||+|+||+||+|.. .+|+.||||.+......   ..+..|+++++.++|+|+|..++ +..+++ .++|||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS---CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC---HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            5799999999999999999985 67899999998754432   35788999999998777665555 445555 778999


Q ss_pred             ccCCCChhhhhhh--------------------------------ccCCC------------------Ccee--------
Q 048684          173 LSPHGSLASLLYA--------------------------------KWLPD------------------KWTH--------  194 (363)
Q Consensus       173 ~~~~gsL~~~l~~--------------------------------~~~~~------------------~~~~--------  194 (363)
                      ||. |+|.+.+..                                ...+.                  ....        
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          84 LLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             CCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             EcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            995 455544320                                00000                  0000        


Q ss_pred             -----EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHh---hhhhc-C--CcCCC
Q 048684          195 -----HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSS---MKELV-D--PTLGD  263 (363)
Q Consensus       195 -----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~---~~~~~-~--~~~~~  263 (363)
                           .....++||+.|||||++.+..++.++|||||||++|||+||+.||............   ..... .  +.+..
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK  242 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence                 0112357999999999999999999999999999999999999999765432221111   11110 1  11122


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          264 AYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       264 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      .++.+    +.+++..||+.||.+||++.++.+.|+
T Consensus       243 ~~p~~----~~~li~~cl~~~p~~RP~~~~i~~~l~  274 (299)
T d1ckia_         243 GYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFR  274 (299)
T ss_dssp             TSCHH----HHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred             CCCHH----HHHHHHHHccCChhHCcCHHHHHHHHH
Confidence            34444    899999999999999999999988764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-33  Score=260.96  Aligned_cols=198  Identities=19%  Similarity=0.294  Sum_probs=145.1

Q ss_pred             CCCccCCcccccCceEEEEEEE----cCCcEEEEEEecCCC---chhHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCC-
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL----EDGQFVAIKRLTRGS---PEEMTTDYLSELGIIVHVDH-PNIAKMIGYGVEGG-  166 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~-  166 (363)
                      ++|++.+.||+|+||+||+|..    .+|+.||||.++...   .....+.+.+|+.+|.+++| |||+++++++.+.. 
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5699999999999999999974    248899999986432   12234578899999999976 89999999887766 


Q ss_pred             eEEEEEccCCCChhhhhhhcc-------------------------------------CCCCceeE--------------
Q 048684          167 MHLILELSPHGSLASLLYAKW-------------------------------------LPDKWTHH--------------  195 (363)
Q Consensus       167 ~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~~~~~--------------  195 (363)
                      .+++||||.+|+|.+++....                                     +.......              
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~  183 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  183 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence            889999999999998874110                                     00000000              


Q ss_pred             --EEeecccccCCCCchhhccC--CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhc--CCcCCCCCCHHH
Q 048684          196 --IVSKIEGTFGYLPPEFFMHG--IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELV--DPTLGDAYNTEQ  269 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  269 (363)
                        ......||+.|+|||.+.+.  .++.++|||||||+||||+||+.||.+...............  .+..+...+   
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s---  260 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS---  260 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC---
T ss_pred             cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC---
Confidence              01224599999999999765  478899999999999999999999987644333222222221  223333344   


Q ss_pred             HHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 048684          270 LTRLLLIASACINQTSACRPQ-----MSKVVQA  297 (363)
Q Consensus       270 ~~~l~~li~~cl~~dP~~RPt-----~~evl~~  297 (363)
                       ..+.+++.+||+.||.+|||     +.|++++
T Consensus       261 -~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         261 -ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             -HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             -HHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence             44999999999999999994     7888875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-32  Score=248.79  Aligned_cols=202  Identities=15%  Similarity=0.190  Sum_probs=145.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCC-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGS-PEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|+..+.||+|+||+||+|+. .+|+.||||+++... .+.....+.+|+.+|+.++|||||++++++.+.. .++|++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5799999999999999999995 678999999997544 3345678999999999999999999999888777 789999


Q ss_pred             ccCCCChhhhhhhcc-------------------------------------CCCC---------ceeE------EEeec
Q 048684          173 LSPHGSLASLLYAKW-------------------------------------LPDK---------WTHH------IVSKI  200 (363)
Q Consensus       173 ~~~~gsL~~~l~~~~-------------------------------------~~~~---------~~~~------~~~~~  200 (363)
                      ++.+++|..++....                                     +...         ....      .....
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~  161 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceee
Confidence            999988877653110                                     0000         0000      01122


Q ss_pred             ccccCCCCchhhccCC-CCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhhcCCc-------------------
Q 048684          201 EGTFGYLPPEFFMHGI-ADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKELVDPT-------------------  260 (363)
Q Consensus       201 ~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~-------------------  260 (363)
                      .+++.|+|||++.... ++.++|||||||++|||++|+.||............+.....+.                   
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM  241 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccc
Confidence            4778899999997665 69999999999999999999999754332222111111110000                   


Q ss_pred             -----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          261 -----LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       261 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                           ............+.+|+.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 0001112234558899999999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=4.1e-32  Score=248.55  Aligned_cols=196  Identities=17%  Similarity=0.211  Sum_probs=143.9

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCC-eEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH-PNIAKMIGYGVEGG-MHLILE  172 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~-~~lv~E  172 (363)
                      ++|.+.+.||+|+||+||+|+. .+|+.||||.+......   ..+.+|++++..+.| +||+.+++++..+. .++|||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc---HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            6799999999999999999995 57999999998654322   356788999999975 89999999888776 789999


Q ss_pred             ccCCCChhhhhhhc--------------------------------------cCC------C--------Ccee------
Q 048684          173 LSPHGSLASLLYAK--------------------------------------WLP------D--------KWTH------  194 (363)
Q Consensus       173 ~~~~gsL~~~l~~~--------------------------------------~~~------~--------~~~~------  194 (363)
                      || +|+|.+++...                                      .+.      .        ....      
T Consensus        82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence            99 67988776410                                      000      0        0000      


Q ss_pred             -------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH--HHHHhhhh---hcC-CcC
Q 048684          195 -------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL--VMWSSMKE---LVD-PTL  261 (363)
Q Consensus       195 -------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~--~~~~~~~~---~~~-~~~  261 (363)
                             .....++||+.|||||++.+..++.++|||||||++|||+||+.||.+.....  .....+..   ... +.+
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l  240 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL  240 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred             cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence                   01223569999999999999999999999999999999999999997643221  11111111   110 111


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHhh
Q 048684          262 GDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQALR  299 (363)
Q Consensus       262 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~  299 (363)
                      ....++    ++.+++..|+..+|.+||++..+.+.|+
T Consensus       241 ~~~~p~----~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         241 CAGFPE----EFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             TTTSCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             cCCCCH----HHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            122344    4899999999999999999988877664

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=5.9e-32  Score=251.30  Aligned_cols=198  Identities=13%  Similarity=0.190  Sum_probs=143.3

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcC---CeEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEG---GMHLI  170 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~---~~~lv  170 (363)
                      ++|++.++||+|+||+||+|+. .+|+.||||+++...    .+.+.+|+.+|..+. ||||+++++++...   ..++|
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            5799999999999999999985 679999999997543    467889999999995 99999999988643   38899


Q ss_pred             EEccCCCChhhhhhh----------------------------cc------CC-CCcee--------------EEEeecc
Q 048684          171 LELSPHGSLASLLYA----------------------------KW------LP-DKWTH--------------HIVSKIE  201 (363)
Q Consensus       171 ~E~~~~gsL~~~l~~----------------------------~~------~~-~~~~~--------------~~~~~~~  201 (363)
                      ||||.+|+|..+...                            ..      +. .....              ......+
T Consensus       111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~  190 (328)
T d3bqca1         111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV  190 (328)
T ss_dssp             EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCC
T ss_pred             EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccc
Confidence            999999999776530                            00      00 00000              0112346


Q ss_pred             cccCCCCchhhccC-CCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhh------------------------h
Q 048684          202 GTFGYLPPEFFMHG-IADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKE------------------------L  256 (363)
Q Consensus       202 gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~------------------------~  256 (363)
                      ||+.|+|||.+.+. .++.++||||+||++|||++|+.||............+..                        .
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T d3bqca1         191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  270 (328)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT
T ss_pred             cCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchh
Confidence            89999999998765 4799999999999999999999999754322211110000                        0


Q ss_pred             cCC--------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          257 VDP--------TLGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       257 ~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...        ..........+..+.+|+.+||+.||.+|||+.|++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000        00000111233458999999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.9e-32  Score=253.13  Aligned_cols=196  Identities=19%  Similarity=0.279  Sum_probs=138.0

Q ss_pred             CCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-------eE
Q 048684           97 NFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDHPNIAKMIGYGVEGG-------MH  168 (363)
Q Consensus        97 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------~~  168 (363)
                      +|...++||+|+||+||+|+. .+|+.||||++.....     .+.+|+.+|++++|||||++++++....       ++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~   95 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN   95 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEE
Confidence            578889999999999999995 5799999999975432     2347999999999999999999875321       68


Q ss_pred             EEEEccCCCChhhhhh----------------------------hc------------cCCCC-ceeE------------
Q 048684          169 LILELSPHGSLASLLY----------------------------AK------------WLPDK-WTHH------------  195 (363)
Q Consensus       169 lv~E~~~~gsL~~~l~----------------------------~~------------~~~~~-~~~~------------  195 (363)
                      +|||||++|.+..+..                            ..            .+... ....            
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence            9999998764333221                            00            00000 0000            


Q ss_pred             --EEeecccccCCCCchhhcc-CCCCccceEEechhHHHHHHhCCCCCCCchhhHHHHHhhhhh---------------c
Q 048684          196 --IVSKIEGTFGYLPPEFFMH-GIADEKTDVYAYGVLLLEIITGRQALDSSQKSLVMWSSMKEL---------------V  257 (363)
Q Consensus       196 --~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~---------------~  257 (363)
                        .....+||+.|+|||.+.+ ..|+.++|||||||++|||++|++||............+...               .
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  255 (350)
T d1q5ka_         176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT  255 (350)
T ss_dssp             TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred             CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence              1123469999999998875 468999999999999999999999998765443333221110               0


Q ss_pred             CCcCC--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          258 DPTLG--------DAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       258 ~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                      ...+.        ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00000        00112234458999999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=2.3e-28  Score=229.59  Aligned_cols=200  Identities=15%  Similarity=0.197  Sum_probs=135.7

Q ss_pred             CCCccCCcccccCceEEEEEEE-cCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-----------CCCcceEEEEEE
Q 048684           96 DNFSHENLIGQGGYAEVYKGQL-EDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-----------HPNIAKMIGYGV  163 (363)
Q Consensus        96 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~  163 (363)
                      ++|+++++||+|+||+||+|+. .+|+.||||+++...  ...+.+.+|+.+++.++           |+|||++++++.
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~--~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc--cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            3599999999999999999985 679999999997543  23467788999888775           578999998765


Q ss_pred             cC---CeEEEEEccCCCChhhhh----------------------------hh-c------cCCCCcee-----------
Q 048684          164 EG---GMHLILELSPHGSLASLL----------------------------YA-K------WLPDKWTH-----------  194 (363)
Q Consensus       164 ~~---~~~lv~E~~~~gsL~~~l----------------------------~~-~------~~~~~~~~-----------  194 (363)
                      ..   ..+++|+++..+......                            +. .      ..+.....           
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccce
Confidence            42   256777776555322111                            11 0      00100000           


Q ss_pred             -------------EEEeecccccCCCCchhhccCCCCccceEEechhHHHHHHhCCCCCCCchhhH------HHHHhh--
Q 048684          195 -------------HIVSKIEGTFGYLPPEFFMHGIADEKTDVYAYGVLLLEIITGRQALDSSQKSL------VMWSSM--  253 (363)
Q Consensus       195 -------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P~~~~~~~~------~~~~~~--  253 (363)
                                   ......+||+.|+|||++....++.++||||+||+++||++|+.||.......      .....+  
T Consensus       171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~  250 (362)
T d1q8ya_         171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  250 (362)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             eeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHH
Confidence                         01122459999999999999999999999999999999999999997543210      000000  


Q ss_pred             ---------------hhhcC-----Cc--------------CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 048684          254 ---------------KELVD-----PT--------------LGDAYNTEQLTRLLLIASACINQTSACRPQMSKVVQA  297 (363)
Q Consensus       254 ---------------~~~~~-----~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~  297 (363)
                                     ....+     ..              ............+.+|+.+||+.||.+|||+.|++++
T Consensus       251 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                           00000     00              0112345667789999999999999999999999975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.88  E-value=2.2e-09  Score=89.84  Aligned_cols=80  Identities=16%  Similarity=0.183  Sum_probs=60.7

Q ss_pred             ccCCcccccCceEEEEEEEcCCcEEEEEEecCCCc-----------------hhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 048684           99 SHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSP-----------------EEMTTDYLSELGIIVHVDHPNIAKMIGY  161 (363)
Q Consensus        99 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~-----------------~~~~~~~~~E~~~l~~l~H~niv~l~~~  161 (363)
                      .+++.||+|+||+||+|...+|+.||||.+.....                 ......+..|...+.++.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            45688999999999999988899999998753211                 0112335578899999999999998876


Q ss_pred             EEcCCeEEEEEccCCCChhh
Q 048684          162 GVEGGMHLILELSPHGSLAS  181 (363)
Q Consensus       162 ~~~~~~~lv~E~~~~gsL~~  181 (363)
                      .   ..+++|||++++.+..
T Consensus        83 ~---~~~lvme~~~~~~~~~   99 (191)
T d1zara2          83 E---GNAVLMELIDAKELYR   99 (191)
T ss_dssp             E---TTEEEEECCCCEEGGG
T ss_pred             c---CCEEEEEeeccccccc
Confidence            4   2479999999876543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.67  E-value=0.07  Score=44.50  Aligned_cols=91  Identities=15%  Similarity=0.133  Sum_probs=60.4

Q ss_pred             HHHHhcCCCccCCcccccCceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCC-e
Q 048684           90 ELQAATDNFSHENLIGQGGYAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVD-HPNIAKMIGYGVEGG-M  167 (363)
Q Consensus        90 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~  167 (363)
                      ++...-..|...+..+.|+.+.||+.... +..+.||+........ ...+.+|..++..+. +--+.+++.++.+++ .
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~-~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccc-hhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            44455567776666555556789988754 5667788875432211 235677888887774 434567777776655 7


Q ss_pred             EEEEEccCCCChhhh
Q 048684          168 HLILELSPHGSLASL  182 (363)
Q Consensus       168 ~lv~E~~~~gsL~~~  182 (363)
                      ++||++++|.++.+.
T Consensus        86 ~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          86 NLLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEEECCSSEEHHHH
T ss_pred             EEEEEeccccccccc
Confidence            899999999777543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=90.24  E-value=0.28  Score=40.30  Aligned_cols=74  Identities=19%  Similarity=0.174  Sum_probs=50.8

Q ss_pred             ccccC-ceEEEEEEEcCCcEEEEEEecCCCchhHHHHHHHHHHHHHhCCC--CCcceEEEEEEcCC-eEEEEEccCCCCh
Q 048684          104 IGQGG-YAEVYKGQLEDGQFVAIKRLTRGSPEEMTTDYLSELGIIVHVDH--PNIAKMIGYGVEGG-MHLILELSPHGSL  179 (363)
Q Consensus       104 lG~G~-fg~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~-~~lv~E~~~~gsL  179 (363)
                      +..|. -+.||+....+|..+++|.......    ..+..|+..++.+..  -.+.++++++.+++ .++||+|++|.++
T Consensus        18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CSCTTSSCEEEEEECTTSCCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCcccCCeEEEEEeCCCCEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            34444 4689999887788889998654432    245677777776642  33567787776655 7899999998766


Q ss_pred             hh
Q 048684          180 AS  181 (363)
Q Consensus       180 ~~  181 (363)
                      .+
T Consensus        94 ~~   95 (255)
T d1nd4a_          94 LS   95 (255)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=80.62  E-value=1.3  Score=38.99  Aligned_cols=77  Identities=14%  Similarity=0.065  Sum_probs=48.0

Q ss_pred             CcccccCceEEEEEEEc-CCcEEEEEEecCC------CchhHHHHHHHHHHHHHhCC-C--CCcceEEEEEEcCCeEEEE
Q 048684          102 NLIGQGGYAEVYKGQLE-DGQFVAIKRLTRG------SPEEMTTDYLSELGIIVHVD-H--PNIAKMIGYGVEGGMHLIL  171 (363)
Q Consensus       102 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~~~~~------~~~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~~~lv~  171 (363)
                      +.||.|....||+.... +|+.|+||.-...      ...-...+...|...|..+. +  ..+.+++.+. ....++||
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d-~~~~~lvm  110 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-TEMAVTVM  110 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-TTTTEEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc-CCCCEEEE
Confidence            46899999999999854 4678999974321      10111234456777777652 2  4456666664 33467999


Q ss_pred             EccCCCCh
Q 048684          172 ELSPHGSL  179 (363)
Q Consensus       172 E~~~~gsL  179 (363)
                      |++.+..+
T Consensus       111 E~L~~~~~  118 (392)
T d2pula1         111 EDLSHLKI  118 (392)
T ss_dssp             CCCTTSEE
T ss_pred             eccCCccc
Confidence            99987543