Citrus Sinensis ID: 048710

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
CITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTMR
Secondary Structure (PSIPRED)
cccccccEEEEEEEEEccccccEEEEEEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHcccccccEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHcccccccccEEccccccccccccccHHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
CITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTqvqgtfgyldlqyfqsspfteksnlltkekpiclttyeenKSLTTYFLRAMKEDRLFEIFDglvlkeggkdEIVVVVKLKKRClnlnekkptmr
Flexible Loop (DISEMBL)
citgglgmllLVTKVLLLCKFMERKKEIklkqklfkrngvkliyegkvnkliNEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSspfteksnlltkekpiclttyeenkSLTTYFLRAMKEDRLFEIFDglvlkeggkdeivVVVKLkkrclnlnekkptmr
Low Complexity Region (SEG)
CItgglgmlllvtkvlllCKFMerkkeiklkqklfkrNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTMR
Disordered region (IsUnstruct)
**TGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL********
Disordered Region (DISOPRED)
*ITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNG**********KLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKP*******E*KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPT**
Disordered Region (DISEMBL)
CITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTMR
Disordered Region (DISPRO)
CITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
CITGGLGMLLLVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTMR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q9SA25	720	Wall-associated receptor	yes	no	0.807	0.233	0.367	8e-33
Q7X8C5	748	Wall-associated receptor	no	no	0.807	0.224	0.346	2e-32
Q9S9M2	761	Wall-associated receptor	no	no	0.807	0.220	0.346	6e-30
Q8RY17	751	Wall-associated receptor	no	no	0.802	0.222	0.348	8e-29
Q9S9M3	730	Wall-associated receptor	no	no	0.798	0.227	0.350	7e-28
Q8VYA3	769	Wall-associated receptor	no	no	0.802	0.217	0.330	9e-28
Q9C9L5	792	Wall-associated receptor	no	no	0.807	0.212	0.336	9e-28
Q9LN59	788	Putative wall-associated	no	no	0.807	0.213	0.331	2e-26
Q9S9M1	731	Wall-associated receptor	no	no	0.807	0.229	0.333	4e-26
Q9S9M5	730	Wall-associated receptor	no	no	0.807	0.230	0.329	6e-26

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score =  140 bits (352), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 125/234 (53%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K + E  + + INE+++LSQIN           LETEV +LVYEFI N  ++ +++N +E
Sbjct: 421 KALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSE 480

Query: 90  EFPIAWEMQLHI---VVDSLA--------------------------------------- 107
           +FP++WE++L I   V D+L+                                       
Sbjct: 481 DFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSV 540

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             D T++TT VQGT GY+D +Y QS+ FT KS+          LLT EKP+ L   +E +
Sbjct: 541 AIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVR 600

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
            L  YFL AM+ DRL EI D  + +E  ++E++ V KL +RCL+LN E +PTMR
Sbjct: 601 MLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMR 654

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K + E +V + INEVV+L+QIN           LETEV +LVYEF+ NG + + ++++++
Sbjct: 447 KAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESD 506

Query: 90  EFPIAWEMQLHIVVDSLA------------------------------------------ 107
           ++ + WE++LHI ++                                             
Sbjct: 507 DYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSV 566

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TTQV GTFGY+D +YFQSS FTEKS+          LLT EKP      EEN+
Sbjct: 567 TIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENR 626

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
            L  +F+ A+KE+R+ +I D  +  E   D+++ V  L +RCLN   +K+P MR
Sbjct: 627 GLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMR 680

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score =  130 bits (327), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K + E KV + INEVV+L+QIN           LETEV +LVYEF+ NG + + + ++ +
Sbjct: 455 KAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECD 514

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           ++ + WE++LHI ++         S A                                 
Sbjct: 515 DYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSV 574

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TTQV GTFGY+D +YFQSS FT+KS+          L+T + P      EEN+
Sbjct: 575 TIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENR 634

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
               +F+ A+KE+R  +I D  +  E   D+++ V KL KRCLN   +K+P MR
Sbjct: 635 GFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMR 688

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score =  127 bits (318), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 68/235 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E KV + INEV +LSQIN           LETEV +LVYE I NG +++ +++ ++
Sbjct: 452 KVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSD 511

Query: 90  EFPIAWEMQLHIVVD---SLA--------------------------------------- 107
           ++ + W+++L I V+   +LA                                       
Sbjct: 512 DYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSI 571

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GTFGYLD +YFQ+S FT+KS+          L+T EKP  +   EEN+
Sbjct: 572 NVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENR 631

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGK-DEIVVVVKLKKRCLNLN-EKKPTMR 208
            L ++F  AMK++R+ +I D  + KEG   ++++ V KL +RCL+L  +K+P MR
Sbjct: 632 GLVSHFNEAMKQNRVLDIVDSRI-KEGCTLEQVLAVAKLARRCLSLKGKKRPNMR 685

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2

 Score =  123 bits (309), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 68/234 (29%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ + INE+V+LSQIN           LETEV +LVYE+I NG +++ ++++ +
Sbjct: 459 KVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYD 518

Query: 90  EFPIAWEMQLHIVVD-------------------------------------------SL 106
           ++ + WE++L I V+                                           S+
Sbjct: 519 DYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSV 578

Query: 107 A-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
           A DQT++TT V GTFGY+D +YF SS +T KS+          L+T EKP+     EE  
Sbjct: 579 ATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGI 638

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
            L TYFL AMKE+R  +I D + +K+  K +++ V KL +RCLN    K+P MR
Sbjct: 639 GLATYFLEAMKENRAVDIID-IRIKDESK-QVMAVAKLARRCLNRKGNKRPNMR 690

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1

 Score =  123 bits (309), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 69/236 (29%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ + INEVVILSQIN           LET+V +LVYEFI NG +++++++ ++
Sbjct: 464 KVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSD 523

Query: 90  EFPIA-WEMQLHIVVD-------------------------------------------- 104
           ++ +  WE++L I VD                                            
Sbjct: 524 DYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRT 583

Query: 105 SLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEEN 154
              D T++TT V GT GY+D +YFQSS FT+KS+          L+T EK +     +E 
Sbjct: 584 VTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEY 643

Query: 155 KSLTTYFLRAMKEDRLFEIFDGLVLKEGGK-DEIVVVVKLKKRCLNLN-EKKPTMR 208
           ++L TYF  AMKE+RL +I D  + ++G K +++    K+ ++CLN+   K+P+MR
Sbjct: 644 RTLATYFTLAMKENRLSDIIDARI-RDGCKLNQVTAAAKIARKCLNMKGRKRPSMR 698

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C9L5|WAKLH_ARATH Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1

 Score =  123 bits (308), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 67/235 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ + INEVVILSQIN           LET+V +LVYEFI NG ++++++++ +
Sbjct: 478 KVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFD 537

Query: 90  EFPIA-WEMQLHIVVDSLA----------------------------------------- 107
           E  +A W ++L I +D                                            
Sbjct: 538 ENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRT 597

Query: 108 ---DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEEN 154
              D T++TT V GT GY+D +YFQSS FT+KS+          L+T EK I     +EN
Sbjct: 598 VTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQEN 657

Query: 155 KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
           ++L TYF+ AMKE++LF+I D  +       ++    K+ ++CLNL   K+P+MR
Sbjct: 658 RTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMR 712

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2

 Score =  119 bits (298), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 115/235 (48%), Gaps = 67/235 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ + INEVVILSQIN           LETEV  LVYEFI NG ++Q+I+ +++
Sbjct: 482 KVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESD 541

Query: 90  EFPIAWEMQLHIVVDSLA------------------------------------------ 107
           ++   W M+L I VD                                             
Sbjct: 542 DYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSV 601

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKP-ICLTTYEEN 154
             D T+ TT + GT GY+D +Y+ SS +T+KS+          L+T EKP I ++  +E 
Sbjct: 602 TIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEI 661

Query: 155 KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           + L  +F  AMKE+R FEI D  +      ++++ V  L +RCLN   +K+P MR
Sbjct: 662 RGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMR 716

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M1|WAKLE_ARATH Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ K INE+++LSQIN           LETEV +LVYE+I NG +++ ++++++
Sbjct: 463 KVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESD 522

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           ++ + WE++L I ++         S A                                 
Sbjct: 523 DYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSV 582

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GTFGY+D +YF SS +T+KS+          L+T EKP+     EE +
Sbjct: 583 TIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGR 642

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNE-KKPTMR 208
            L T+FL AMKE+R+ +I D  + +E   D+++ V KL ++CL+    K+P MR
Sbjct: 643 GLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMR 696

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. May be involved in plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1

 Score =  117 bits (293), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 123/234 (52%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+ + INE+V+LSQIN           LETEV +LVYE+I NG +++ ++++++
Sbjct: 460 KVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESD 519

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           ++ + WE++L I ++         S A                                 
Sbjct: 520 DYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSV 579

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GTFGY+D +YF SS +T KS+          L+T EKP+     EE +
Sbjct: 580 TLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGR 639

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEK-KPTMR 208
            L T+FL AMKE+R+ +I D  +  E   ++++ V KL ++CLN   K +P M+
Sbjct: 640 GLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMK 693

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
255541802	743	kinase, putative [Ricinus communis] gi|2	0.807	0.226	0.457	6e-45
255545828	694	kinase, putative [Ricinus communis] gi|2	0.807	0.242	0.470	5e-44
255545824	727	kinase, putative [Ricinus communis] gi|2	0.807	0.231	0.465	2e-42
359475620	822	PREDICTED: wall-associated receptor kina	0.807	0.204	0.457	2e-42
297734146	1029	unnamed protein product [Vitis vinifera]	0.807	0.163	0.435	1e-41
225349562	260	kinase-like protein [Corylus avellana]	0.783	0.626	0.451	3e-40
225349556	260	kinase-like protein [Corylus avellana]	0.783	0.626	0.451	5e-40
225455808	718	PREDICTED: wall-associated receptor kina	0.807	0.233	0.435	5e-40
147852023	413	hypothetical protein VITISV_028337 [Viti	0.807	0.406	0.435	7e-40
225349560	260	kinase-like protein [Corylus avellana]	0.783	0.626	0.447	1e-39

>gi|255541802|ref|XP_002511965.1| kinase, putative [Ricinus communis] gi|223549145|gb|EEF50634.1| kinase, putative [Ricinus communis]

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 107/234 (45%), Positives = 135/234 (57%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K+  E K  + INEVVILSQIN           LETEV LLVYEFI NGT+YQ++++ +E
Sbjct: 433 KIADESKTEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQHLHDPSE 492

Query: 90  EFPIAWEMQLHIVVDS-------------------------------------------- 105
           EFPI WEM+L I +++                                            
Sbjct: 493 EFPITWEMRLRIAIETGSALSYLHSAASVPIYHRDIKSTNILLDDKYRAKVSDFGTSKSI 552

Query: 106 LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT+VQGTFGYLD +YFQSS FTEKS+          LLT +KPI      E +
Sbjct: 553 AVDQTHVTTRVQGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPISSARAVEER 612

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           SL  YFL +M+++RLFEI D  VLKEGGK+EI+ V KL +RCLNLN +K+PTMR
Sbjct: 613 SLAMYFLLSMEQNRLFEILDARVLKEGGKEEILAVAKLARRCLNLNGKKRPTMR 666

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545828|ref|XP_002513974.1| kinase, putative [Ricinus communis] gi|223547060|gb|EEF48557.1| kinase, putative [Ricinus communis]

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/234 (47%), Positives = 137/234 (58%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E K+++ INEVVILSQIN           LETEV LLVYEFI NGT+YQYI+N NE
Sbjct: 431 KVVDEDKLDQFINEVVILSQINHRNVVKLIGCCLETEVPLLVYEFIPNGTLYQYIHNPNE 490

Query: 90  EFPIAWEMQLHI---VVDSLA--------------------------------------- 107
           EFP+ WEM+L I   V  +LA                                       
Sbjct: 491 EFPVTWEMRLRIATEVAGALAYLHAAASMPIYHRDIKSSNILLDEKYRAKVADFGTSKSI 550

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT+VQGTFGYLD +YFQSS FTEKS+          LLT +KPI      E +
Sbjct: 551 SIDQTHVTTRVQGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPISSYRSVEER 610

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           SL TYFL  M+E RLFEI D  VLKEGG++EI+ + KL ++CLNLN +K+P M+
Sbjct: 611 SLATYFLMTMEESRLFEILDARVLKEGGREEIIAMAKLAEKCLNLNGKKRPKMK 664

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545824|ref|XP_002513972.1| kinase, putative [Ricinus communis] gi|223547058|gb|EEF48555.1| kinase, putative [Ricinus communis]

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/234 (46%), Positives = 135/234 (57%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           KL+ E K+++ INEVVILSQIN           LETEV LLVYEFI NGT++QYI N N+
Sbjct: 426 KLVDEDKLDQFINEVVILSQINHRNVVKLTGCCLETEVPLLVYEFIPNGTLFQYIQNPNK 485

Query: 90  EFPIAWEMQLHI---VVDSLA--------------------------------------- 107
           EFPI WEM+L I   V  +LA                                       
Sbjct: 486 EFPITWEMRLRIATEVAGALAYLHSAASMPIYHRDIKSSNILLDEKYRAKVADFGTSKSI 545

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             +QT++TT VQGTFGYLD +YFQSS FTEKS+          LLT +KPI      E +
Sbjct: 546 AIEQTHVTTLVQGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPISSLRSVEER 605

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKK-PTMR 208
           SL TYFL  M+E+RLFEI D  VLKEGG++EI+ + K+ ++CLNLN KK P M+
Sbjct: 606 SLATYFLMTMEENRLFEILDARVLKEGGREEIIAMAKMAEKCLNLNGKKRPKMK 659

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475620|ref|XP_002266785.2| PREDICTED: wall-associated receptor kinase-like 1-like [Vitis vinifera]

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/234 (45%), Positives = 136/234 (58%), Gaps = 66/234 (28%)

Query: 40  VKLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN 88
           +K++ +GKV + INEVVILSQIN           LET V LLVYEFI NGT+ ++I++QN
Sbjct: 559 LKIVGDGKVEQFINEVVILSQINHRNVVKLLGCCLETAVPLLVYEFIPNGTLSEHIHDQN 618

Query: 89  EEFPIAWEMQLHIVVD-------------------------------------------S 105
           EEFPI WEM+L I ++                                           S
Sbjct: 619 EEFPITWEMRLRIAIEVAGALSYLHSAASIPIYHRDIKSTNILLDDKYRAKVADFGTSKS 678

Query: 106 LA-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEEN 154
           +A DQT++TTQVQGTFGYLD +YFQSS FTEKS+          LLT +KPI  T  EE 
Sbjct: 679 VAIDQTHLTTQVQGTFGYLDPEYFQSSQFTEKSDVYSFGIVLIELLTGKKPILSTASEEG 738

Query: 155 KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKK-PTM 207
           KSL +YF+ +M EDRL ++ D  V+KEG K+EI  +  L +RC+NLN KK PTM
Sbjct: 739 KSLASYFILSMNEDRLSDLLDAQVVKEGKKEEINAIAFLARRCINLNGKKRPTM 792

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734146|emb|CBI15393.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 102/234 (43%), Positives = 135/234 (57%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E ++   INE+VILSQIN           LETEV LLVYEFISNGT++Q I++QN 
Sbjct: 298 KIVDENQLEHFINEIVILSQINHRNVVGILGCCLETEVPLLVYEFISNGTLFQLIHDQNS 357

Query: 90  EFPIAWEMQLHIVVD-------------------------------------------SL 106
           EFP++WEM+L I ++                                           S+
Sbjct: 358 EFPLSWEMRLRIALEVSGALSYLHSACSIPIYHRDIKSTNILLDDKYKAKVSDFGTSRSI 417

Query: 107 A-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
           + DQT++TT VQGTFGYLD +YFQSS FTEKS+          LLT +KPI  T   E K
Sbjct: 418 SIDQTHLTTIVQGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPISSTRSPEEK 477

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           SL T+F+ +++E RLF+I D  V+KEG K++I+   KL  RCLNLN  K+PTM+
Sbjct: 478 SLATHFILSLQESRLFDILDARVVKEGRKEDIMTFAKLAGRCLNLNGRKRPTMK 531

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225349562|gb|ACN87675.1| kinase-like protein [Corylus avellana]

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/228 (45%), Positives = 130/228 (57%), Gaps = 65/228 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K+I EGK+ + INEVVILSQIN           LETEV LLVY +I NGT++QY+N Q E
Sbjct: 33  KVIDEGKLGEFINEVVILSQINHRNVVKLIGCCLETEVPLLVYGYIPNGTLFQYVNGQIE 92

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           EFP+ W+M+L I  +         SLA                                 
Sbjct: 93  EFPLTWDMRLRIATEVAGALYYLHSLASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSI 152

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GTFGYLD +Y QSS FTEKS+          LLT EK I  T  +E+K
Sbjct: 153 TVDQTHLTTPVHGTFGYLDPEYLQSSQFTEKSDVYSFGVVLAELLTGEKAISSTRTQESK 212

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEK 203
           SL TYF+++++E+ LF++ D  VLKEG K+EI+VV  L KRCLNLN K
Sbjct: 213 SLATYFIQSVEENNLFDVLDSRVLKEGKKEEIIVVANLAKRCLNLNGK 260

Source: Corylus avellana

Species: Corylus avellana

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225349556|gb|ACN87672.1| kinase-like protein [Corylus avellana]

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/228 (45%), Positives = 130/228 (57%), Gaps = 65/228 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K+I EGK+ + INEVVILSQIN           LETEV LLVYE+I NGT++QY+N Q E
Sbjct: 33  KVIDEGKLGEFINEVVILSQINHRNVVKLIGCCLETEVPLLVYEYIPNGTLFQYVNGQIE 92

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           EFP+ W+M+L I  +         SLA                                 
Sbjct: 93  EFPLTWDMRLRIATEVAEALFYLHSLASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSI 152

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GTFGYLD +Y QSS FTEKS+          LLT EK I  T  +E+K
Sbjct: 153 TVDQTHLTTLVHGTFGYLDPEYLQSSQFTEKSDVYSFGVVLAELLTGEKAISSTRTQESK 212

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEK 203
           SL TYF+++++ + LF++ D  VLKEG K+EI+VV  L KRCLNLN K
Sbjct: 213 SLATYFIQSVEGNNLFDVLDSRVLKEGKKEEIIVVANLAKRCLNLNGK 260

Source: Corylus avellana

Species: Corylus avellana

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455808|ref|XP_002274809.1| PREDICTED: wall-associated receptor kinase-like 9-like [Vitis vinifera]

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 135/234 (57%), Gaps = 66/234 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K++ E ++   INE+VILSQIN           LETEV LLVYEFISNGT++Q I++QN 
Sbjct: 418 KIVDENQLEHFINEIVILSQINHRNVVGILGCCLETEVPLLVYEFISNGTLFQLIHDQNS 477

Query: 90  EFPIAWEMQLHIVVD-------------------------------------------SL 106
           EFP++WEM+L I ++                                           S+
Sbjct: 478 EFPLSWEMRLRIALEVSGALSYLHSACSIPIYHRDIKSTNILLDDKYKAKVSDFGTSRSI 537

Query: 107 A-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
           + DQT++TT VQGTFGYLD +YFQSS FTEKS+          LLT +KPI  T   E K
Sbjct: 538 SIDQTHLTTIVQGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPISSTRSPEEK 597

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           SL T+F+ +++E RLF+I D  V+KEG K++I+   KL  RCLNLN  K+PTM+
Sbjct: 598 SLATHFILSLQESRLFDILDARVVKEGRKEDIMTFAKLAGRCLNLNGRKRPTMK 651

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147852023|emb|CAN82287.1| hypothetical protein VITISV_028337 [Vitis vinifera]

 Score =  169 bits (428), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 135/234 (57%), Gaps = 66/234 (28%)

Query: 40  VKLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN 88
           +K++ +GK+ + INEVVILSQIN           LE EV LLVYE+I NGT+ ++I++QN
Sbjct: 113 LKIVGDGKLEQFINEVVILSQINHRNVVKLLGCCLEIEVPLLVYEYIPNGTLSEHIHDQN 172

Query: 89  EEFPIAWEMQLHIVVD-------------------------------------------S 105
           EEFPI W+M+L I  +                                           S
Sbjct: 173 EEFPITWKMRLQIATEVAGALSYLHSAASIPIYHRDIKSTNILLDDKYRAKVADFGTSKS 232

Query: 106 LA-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEEN 154
           +A DQT++TT+VQGTFGYLD +YFQSS FTEKS+          LLT +KPI      E 
Sbjct: 233 VAIDQTHLTTKVQGTFGYLDPEYFQSSQFTEKSDVYSFGIVLIELLTGKKPILSIGSGEG 292

Query: 155 KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM 207
           KSL +YF+ +MKEDRL ++ D  V+KEG K+EI  +  L KRC+NLN +K+PTM
Sbjct: 293 KSLASYFIMSMKEDRLSDLLDARVVKEGRKEEINAIAFLAKRCINLNGKKRPTM 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225349560|gb|ACN87674.1| kinase-like protein [Corylus avellana]

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 129/228 (56%), Gaps = 65/228 (28%)

Query: 41  KLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE 89
           K+I EGK+ + INEVVILSQIN           LETEV LLVYE+I NGT++QY+N Q E
Sbjct: 33  KVIDEGKLGEFINEVVILSQINHRNVVKLIGCCLETEVPLLVYEYIPNGTLFQYVNGQIE 92

Query: 90  EFPIAWEMQLHIVVD---------SLA--------------------------------- 107
           EFP+ W+M+L I  +         SLA                                 
Sbjct: 93  EFPLTWDMRLRIATEVAGALFYLHSLASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSI 152

Query: 108 --DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENK 155
             DQT++TT V GT GYLD +Y QSS FTEKS+          LLT EK I  T  +E+K
Sbjct: 153 TVDQTHLTTLVHGTLGYLDPEYLQSSQFTEKSDVYSFGVVLAELLTGEKAISSTRTQESK 212

Query: 156 SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEK 203
           SL TYF+++++E+ LF++ D  VLKEG K+EI+ V  L KRCLNLN K
Sbjct: 213 SLATYFIQSVEENNLFDVLDSRVLKEGKKEEIIAVANLAKRCLNLNGK 260

Source: Corylus avellana

Species: Corylus avellana

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2032875	720	AT1G16260 [Arabidopsis thalian	0.485	0.140	0.473	9.5e-32
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.485	0.135	0.473	1.4e-31
TAIR|locus:2200552	730	WAKL1 "wall associated kinase-	0.485	0.138	0.419	5.5e-30
TAIR|locus:2019893	751	RFO1 "RESISTANCE TO FUSARIUM O	0.480	0.133	0.460	6.2e-29
TAIR|locus:2014962	733	WAK5 "wall associated kinase 5	0.485	0.137	0.383	1.4e-24
TAIR|locus:2014952	738	WAK4 "wall associated kinase 4	0.485	0.136	0.348	4.1e-22
TAIR|locus:2014897	741	WAK3 "wall associated kinase 3	0.485	0.136	0.357	5.2e-22
TAIR|locus:2014902	735	WAK1 "cell wall-associated kin	0.485	0.137	0.348	1.4e-21
TAIR|locus:2094468	433	AT3G25490 [Arabidopsis thalian	0.480	0.230	0.369	2.6e-21
TAIR|locus:2014912	732	WAK2 "wall-associated kinase 2	0.485	0.137	0.339	5.3e-20

TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
 Identities = 53/112 (47%), Positives = 72/112 (64%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D T++TT VQGT GY+D +Y QS+ FT KS+          LLT EKP+ L   +E + L
Sbjct:   543 DDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRML 602

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
               YFL AM+ DRL EI D  + +E  ++E++ V KL +RCL+LN E +PTMR
Sbjct:   603 GAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMR 654

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
 Identities = 53/112 (47%), Positives = 70/112 (62%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             DQT++TTQV GTFGY+D +YFQSS FTEKS+          LLT EKP      EEN+ L
Sbjct:   569 DQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGL 628

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKK-PTMR 208
               +F+ A+KE+R+ +I D  +  E   D+++ V  L +RCLN   KK P MR
Sbjct:   629 AAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMR 680

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
 Identities = 47/112 (41%), Positives = 69/112 (61%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             DQT++TT V GTFGY+D +YF SS +T KS+          L+T EKP+     EE + L
Sbjct:   582 DQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGL 641

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEK-KPTMR 208
              T+FL AMKE+R+ +I D  +  E   ++++ V KL ++CLN   K +P M+
Sbjct:   642 ATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMK 693

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019893 RFO1 "RESISTANCE TO FUSARIUM OXYSPORUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
 Identities = 52/113 (46%), Positives = 74/113 (65%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             DQT++TT V GTFGYLD +YFQ+S FT+KS+          L+T EKP  +   EEN+ L
Sbjct:   574 DQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGL 633

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGK-DEIVVVVKLKKRCLNLNEKK-PTMR 208
              ++F  AMK++R+ +I D  + KEG   ++++ V KL +RCL+L  KK P MR
Sbjct:   634 VSHFNEAMKQNRVLDIVDSRI-KEGCTLEQVLAVAKLARRCLSLKGKKRPNMR 685

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009620 "response to fungus" evidence=IMP

TAIR|locus:2014962 WAK5 "wall associated kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
 Identities = 43/112 (38%), Positives = 64/112 (57%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             DQ  +TT VQGT GYLD +Y+ +    EKS+          LL+ EK +C    + +K L
Sbjct:   561 DQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHL 620

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
              +YF+ AMKE+RL EI DG V+ E  + EI    ++   C  +  E++P+M+
Sbjct:   621 VSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMK 672

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014952 WAK4 "wall associated kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
 Identities = 39/112 (34%), Positives = 60/112 (53%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D+  + T VQGT GYLD +Y+ +    EKS+          LL+ +K +C    + +K +
Sbjct:   563 DKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHI 622

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
              +YF  A KE+RL EI DG V+ E  + EI    ++   C  L  E++P M+
Sbjct:   623 VSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMK 674

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA;IMP

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2014897 WAK3 "wall associated kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
 Identities = 40/112 (35%), Positives = 60/112 (53%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D+  +TT VQGT GYLD +Y+ +    EKS+          LL+ +K +C    + +K L
Sbjct:   568 DKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHL 627

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
              +YF+ A +E+RL EI D  VL E    EI    ++   C  L  E++P M+
Sbjct:   628 VSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMK 679

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014902 WAK1 "cell wall-associated kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
 Identities = 39/112 (34%), Positives = 58/112 (51%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D+  + T VQGT GYLD +Y+ +    EKS+          LL+ +K +C    + +K L
Sbjct:   562 DKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHL 621

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
              +YF  A KE+RL EI  G V+ E    EI    ++   C  L  E++P M+
Sbjct:   622 VSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMK 673

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007166 "cell surface receptor signaling pathway" evidence=IPI

GO:0005773 "vacuole" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009615 "response to virus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2094468 AT3G25490 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
 Identities = 41/111 (36%), Positives = 60/111 (54%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D+  +TT VQGT GYLD +Y+ +    EKS+          L++ +K +C    E +K L
Sbjct:   261 DKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHL 320

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM 207
              +YF+ A KE+RL EI D  VL E  + EI    ++   C  L  E++P M
Sbjct:   321 VSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRM 371

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014912 WAK2 "wall-associated kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
 Identities = 38/112 (33%), Positives = 57/112 (50%)

Query:   108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSL 157
             D+  +TT VQGT GYLD +Y+ +    EKS+          LL+ +K +C       K+L
Sbjct:   557 DKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNL 616

Query:   158 TTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL-NEKKPTMR 208
              + F  A K +R  EI DG V+ E  + EI    ++   C  L  E++P M+
Sbjct:   617 VSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMK 668

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IDA

GO:0009311 "oligosaccharide metabolic process" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009992 "cellular water homeostasis" evidence=IMP;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.95
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.88
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.82
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.82
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.82
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.78
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.69
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.68
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.66
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.6
PHA02988	283	hypothetical protein; Provisional	99.58
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.58
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.57
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.55
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.55
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.55
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.54
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.53
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.53
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.51
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.5
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.49
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.49
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.49
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.49
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.49
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.49
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.48
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.48
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.47
KOG0578	550	consensus p21-activated serine/threonine protein k	99.47
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.47
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.47
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.47
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.47
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.47
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.46
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.46
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.46
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.45
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.45
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.45
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.44
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.44
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.44
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.44
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.44
PTZ00267	478	NIMA-related protein kinase; Provisional	99.43
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.43
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.43
KOG0198	313	consensus MEKK and related serine/threonine protei	99.43
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.43
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.43
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.43
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.42
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.42
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.42
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.42
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.42
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.42
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.42
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.42
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.41
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.41
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.41
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.41
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.41
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.41
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.4
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.4
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.4
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.4
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.4
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.4
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.4
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.4
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.4
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.4
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.4
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.39
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.39
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.39
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.39
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.39
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.39
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.39
KOG0589	426	consensus Serine/threonine protein kinase [General	99.39
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.38
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.38
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.38
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.38
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.38
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.38
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.38
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.38
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.38
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.38
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.38
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.38
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.37
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.37
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.37
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.37
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.37
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.36
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.36
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.36
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.36
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.36
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.36
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.36
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.36
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.35
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.35
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.35
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.35
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.35
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.35
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.35
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.35
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.35
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.34
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.34
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.34
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.34
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.34
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.34
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.34
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.34
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.34
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.34
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.33
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.33
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.33
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.33
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.33
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.33
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.33
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.33
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.33
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.33
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.33
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.33
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.33
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.33
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.33
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.33
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.32
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.32
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.32
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.32
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.32
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.32
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.32
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.32
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.31
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.31
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.31
KOG3653	534	consensus Transforming growth factor beta/activin	99.31
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.31
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.31
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.31
PTZ00283	496	serine/threonine protein kinase; Provisional	99.31
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.3
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.3
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.3
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.3
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.3
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.3
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.3
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.3
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.3
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.3
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.3
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.3
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.29
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.29
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.29
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.29
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.28
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.27
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.27
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.27
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.27
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.26
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.26
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.26
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.26
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.26
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.25
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.25
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.25
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.25
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.25
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.25
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.24
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.24
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.24
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.24
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.24
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.24
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.23
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.23
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.23
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.23
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.23
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.23
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.23
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.23
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.23
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.23
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.22
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.22
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.22
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.21
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.21
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.21
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.21
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.21
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.21
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.2
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.2
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.2
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.2
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.2
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.19
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.19
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.19
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.19
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.19
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.19
KOG0584	632	consensus Serine/threonine protein kinase [General	99.18
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.18
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.18
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.18
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.18
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.18
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.18
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.18
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.18
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.17
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.17
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.16
KOG0605	550	consensus NDR and related serine/threonine kinases	99.16
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.16
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.16
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.16
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.15
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.14
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.14
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.14
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.14
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.13
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.13
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.13
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.13
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.13
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.12
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.12
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.12
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.12
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.12
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.12
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.11
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.11
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.11
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.1
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.1
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.1
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.1
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.09
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.09
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.09
PHA03207	392	serine/threonine kinase US3; Provisional	99.08
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.08
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.08
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.08
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.08
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.08
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.07
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.07
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.07
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.07
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.06
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.05
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.05
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.05
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.05
KOG0610	459	consensus Putative serine/threonine protein kinase	99.05
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.04
PHA03209	357	serine/threonine kinase US3; Provisional	99.03
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.03
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.02
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.02
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.02
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.01
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.01
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.01
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.01
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.01
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.99
PHA03211	461	serine/threonine kinase US3; Provisional	98.99
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.98
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.98
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.98
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.96
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.96
PHA03212	391	serine/threonine kinase US3; Provisional	98.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.95
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.94
PTZ00284	467	protein kinase; Provisional	98.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.94
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.92
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.91
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.91
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.9
PLN00009	294	cyclin-dependent kinase A; Provisional	98.9
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.89
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.89
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.88
PTZ00036	440	glycogen synthase kinase; Provisional	98.87
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.86
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.85
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.85
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.85
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.84
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.84
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.82
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.81
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.8
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.8
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.78
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.78
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.77
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.76
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.75
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.73
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.72
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.7
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.69
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.64
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.61
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.61
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.6
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.59
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.58
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.58
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.58
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.55
PHA03210	501	serine/threonine kinase US3; Provisional	98.51
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.48
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.47
PLN00181	793	protein SPA1-RELATED; Provisional	98.4
KOG0586	596	consensus Serine/threonine protein kinase [General	98.39
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.35
PHA02882	294	putative serine/threonine kinase; Provisional	98.28
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.23
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.22
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.21
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.21
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.14
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.12
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.11
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.1
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.07
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.06
KOG0607	463	consensus MAP kinase-interacting kinase and relate	97.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	97.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.87
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	97.83
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.57
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.51
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.45
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.42
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.4
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	97.38
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	96.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	96.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.73
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	96.72
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	96.66
KOG1152	772	consensus Signal transduction serine/threonine kin	96.56
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.41
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	96.22
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.04
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	95.89
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	95.56
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	95.29
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.29
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	95.29
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	93.9
PRK14879	211	serine/threonine protein kinase; Provisional	93.39
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	93.25
PRK09188	365	serine/threonine protein kinase; Provisional	93.22
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	93.02
KOG1167	418	consensus Serine/threonine protein kinase of the C	92.94
PF14991	118	MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P	92.74
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	92.69
PF07204	98	Orthoreo_P10: Orthoreovirus membrane fusion protei	91.87
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	91.75
PRK09605	535	bifunctional UGMP family protein/serine/threonine	90.62
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	87.95
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	87.64
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	86.77
PRK12274	218	serine/threonine protein kinase; Provisional	86.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	86.06
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	86.03
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	85.69
KOG0606	1205	consensus Microtubule-associated serine/threonine	85.23
PF08114	43	PMP1_2: ATPase proteolipid family; InterPro: IPR01	85.03
smart00090	237	RIO RIO-like kinase.	85.03
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	84.8
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	84.02
PF10883	87	DUF2681: Protein of unknown function (DUF2681); In	83.63
PF12191	129	stn_TNFRSF12A: Tumour necrosis factor receptor stn	81.1
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	80.87

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.2e-28  Score=193.27  Aligned_cols=160  Identities=32%  Similarity=0.506  Sum_probs=135.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCC-eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETE-VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~-~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .++|.+|+.++++++           .+.+ ..+||||||+||||.++|+..... .++|.+|++||+|+          
T Consensus       115 ~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~  193 (361)
T KOG1187|consen  115 EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEG  193 (361)
T ss_pred             hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccC
Confidence            467999999999999           5556 599999999999999999987664 68999999999999          


Q ss_pred             -----------------C--------------CCCc-cc-cccc-cCCcCccCccccccCCCCcce----------eEec
Q 048710          106 -----------------L--------------ADQT-YM-TTQV-QGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 -----------------~--------------~~~~-~~-~~~~-~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                       +              .... .. .... .||+||+|||+.+++..++|+          |++|
T Consensus       194 ~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit  273 (361)
T KOG1187|consen  194 CPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT  273 (361)
T ss_pred             CCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHh
Confidence                             0              0010 11 1111 899999999999999999999          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCccccccccccc-ccCcH-HHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVL-KEGGK-DEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~-~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+.|.+...+.+...+.+|+...+.++.+.+++||.+. ..++. +++..+..+|.+|++.+ .+||+|+
T Consensus       274 gr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~  343 (361)
T KOG1187|consen  274 GRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMS  343 (361)
T ss_pred             CCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHH
Confidence            99998866555666799999999999999999999997 55554 78999999999999999 9999994

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.88  E-value=1e-23  Score=176.18  Aligned_cols=148  Identities=14%  Similarity=0.266  Sum_probs=118.8

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ..++.+..+|+.|..||++++           .......||.|||+||+|+.||+.+.+.  ++|.+.+.++.||     
T Consensus       668 GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMk  745 (996)
T KOG0196|consen  668 GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMK  745 (996)
T ss_pred             CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhH
Confidence            445677889999999999998           7778899999999999999999988764  9999999999999     


Q ss_pred             -----------------------------------CCCCc-cccccccC--CcCccCccccccCCCCcce----------
Q 048710          106 -----------------------------------LADQT-YMTTQVQG--TFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 -----------------------------------~~~~~-~~~~~~~g--t~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                         ..+.. ...++..|  .++|.|||.+..+++|..|          
T Consensus       746 YLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmW  825 (996)
T KOG0196|consen  746 YLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW  825 (996)
T ss_pred             HHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEE
Confidence                                               11111 11222223  6899999999999999999          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+++ |++||..++                +.++.+.++...+.+.|++++..+.+||++||+.| .+||.+
T Consensus       826 EVmSyGERPYWdmS----------------NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F  881 (996)
T KOG0196|consen  826 EVMSYGERPYWDMS----------------NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKF  881 (996)
T ss_pred             EecccCCCcccccc----------------hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCH
Confidence            9888 999999653                22333344445556777899999999999999999 999986

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.82  E-value=5.3e-20  Score=147.32  Aligned_cols=144  Identities=21%  Similarity=0.314  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCC-eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETE-VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~-~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .++|.+|+.+|.+++           .+.. ..+||+|||++|+|+++|++..+. .++|..++++|.+|          
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~-~l~~~~~l~~aldiArGm~YLH~~  161 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKR-KLPLKVRLRIALDIARGMEYLHSE  161 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhcC
Confidence            679999999999999           3333 689999999999999999985222 79999999999988          


Q ss_pred             C---------------CC----------------Cc-cccccccCCcCccCccccc--cCCCCcce----------eEec
Q 048710          106 L---------------AD----------------QT-YMTTQVQGTFGYLDLQYFQ--SSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ~---------------~~----------------~~-~~~~~~~gt~~y~aPE~~~--~~~~~~ks----------E~~t  141 (208)
                      .               .+                .+ ...+...||+.|||||++.  ...|+.|+          |++|
T Consensus       162 ~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t  241 (362)
T KOG0192|consen  162 GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLT  241 (362)
T ss_pred             CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHH
Confidence            0               00                11 2334478999999999999  66999999          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....+      ...+......+.         +.+.+..+...+..++.+||+.+ ++||++
T Consensus       242 ~~~Pf~~~~~------~~~~~~v~~~~~---------Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f  293 (362)
T KOG0192|consen  242 GEIPFEDLAP------VQVASAVVVGGL---------RPPIPKECPPHLSSLMERCWLVDPSRRPSF  293 (362)
T ss_pred             CCCCCCCCCH------HHHHHHHHhcCC---------CCCCCccCCHHHHHHHHHhCCCCCCcCCCH
Confidence            9999985421      122222222221         12223335567778888999999 999997

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.82  E-value=2.8e-20  Score=157.09  Aligned_cols=150  Identities=16%  Similarity=0.294  Sum_probs=115.6

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-----------CCCCCHHHHHH
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-----------EFPIAWEMQLH  100 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-----------~~~l~~~~r~~  100 (208)
                      .+.+..++|.+|+++|+.++           .+.+..++|+|||+.|+|.+||+..+.           ..+|+-.+-+.
T Consensus       528 a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~  607 (774)
T KOG1026|consen  528 AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLH  607 (774)
T ss_pred             ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHH
Confidence            34446789999999999999           889999999999999999999985321           11388889999


Q ss_pred             HHHhC-------------------------------------CCCC----ccc-cccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS-------------------------------------LADQ----TYM-TTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i-------------------------------------~~~~----~~~-~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      ||.||                                     ..+.    ... .....=.++||+||.+..++||++| 
T Consensus       608 iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSD  687 (774)
T KOG1026|consen  608 IATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESD  687 (774)
T ss_pred             HHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhh
Confidence            99999                                     0111    111 1122236899999999999999999 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |++| |+-||.....       +.|.+.++.|.+         .++|..++..+.+||..||+.. .+||+
T Consensus       688 VWs~GVvLWEIFsyG~QPy~glSn-------~EVIe~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPs  751 (774)
T KOG1026|consen  688 VWSFGVVLWEIFSYGKQPYYGLSN-------QEVIECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPS  751 (774)
T ss_pred             hhhhhhhhhhhhccccCcccccch-------HHHHHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCC
Confidence                     9999 9999985432       224455556654         3667788889999999999999 99999


Q ss_pred             CC
Q 048710          207 MR  208 (208)
Q Consensus       207 m~  208 (208)
                      ++
T Consensus       752 F~  753 (774)
T KOG1026|consen  752 FK  753 (774)
T ss_pred             HH
Confidence            74

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.1e-20  Score=152.36  Aligned_cols=145  Identities=16%  Similarity=0.235  Sum_probs=111.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|+++|.+|+           ...+..|||+|||++|||.+||+...+. .++..+.+.++.||          
T Consensus       244 ~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~-~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  244 SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGG-LLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCC-ccchHHHHHHHHHHHHHHHHHHhC
Confidence            4578999999999999           4446799999999999999999984433 68888888888888          


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                                     ..+.........-++.|+|||.+..++|+.||          |++| |+
T Consensus       323 ~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  323 NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence                                           11222233344447899999999999999999          9999 89


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .||..+.      ..+ +.+.+.+|         -+-..|..++..+.+||..||+.+ ++|||+.
T Consensus       403 ~py~~ms------n~e-v~~~le~G---------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~  452 (468)
T KOG0197|consen  403 VPYPGMS------NEE-VLELLERG---------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFE  452 (468)
T ss_pred             CCCCCCC------HHH-HHHHHhcc---------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHH
Confidence            9987543      111 22233333         334566678889999999999999 9999973

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.78  E-value=1.3e-18  Score=156.60  Aligned_cols=150  Identities=18%  Similarity=0.255  Sum_probs=114.5

Q ss_pred             HHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------C-------
Q 048710           52 INEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------L-------  106 (208)
Q Consensus        52 ~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------~-------  106 (208)
                      ..|++.+.+++           .+.+..|+||||+++|+|.++++      .++|.++.+|+.++       .       
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~i  804 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAV  804 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            45688888888           56778899999999999999996      38899999998887       0       


Q ss_pred             -------------CCCc-----------cccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCcc
Q 048710          107 -------------ADQT-----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYE  152 (208)
Q Consensus       107 -------------~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~  152 (208)
                                   .+..           .......||.+|||||++.+..++.++          |++||+.|+.... .
T Consensus       805 iH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~-~  883 (968)
T PLN00113        805 VVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-G  883 (968)
T ss_pred             ecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc-C
Confidence                         0000           011223467999999999999999988          9999999986432 2


Q ss_pred             CCccHHHHHHHHHhcCccccccccccccc--CcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          153 ENKSLTTYFLRAMKEDRLFEIFDGLVLKE--GGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       153 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ....+..|+...........++|+.+...  .+.+....+.+++.+||+.+ ++||+|.
T Consensus       884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~  942 (968)
T PLN00113        884 VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN  942 (968)
T ss_pred             CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH
Confidence            34467777776655556667788877543  34577778899999999999 9999984

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.69  E-value=3e-17  Score=134.26  Aligned_cols=154  Identities=17%  Similarity=0.265  Sum_probs=104.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +...++|.+|+++|++++           ..++.+++|+|||+||+|.+||..+..+ .+.-..-+.|+.+|        
T Consensus       576 ~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLe  654 (807)
T KOG1094|consen  576 KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLE  654 (807)
T ss_pred             hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHH
Confidence            334689999999999999           6678899999999999999999887543 23445556677777        


Q ss_pred             -------------------------CC--------CCccc-cccccCCcCccCccccccCCCCcce----------eE--
Q 048710          106 -------------------------LA--------DQTYM-TTQVQGTFGYLDLQYFQSSPFTEKS----------NL--  139 (208)
Q Consensus       106 -------------------------~~--------~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ks----------E~--  139 (208)
                                               +.        +.+.. ....+=+++|||+|.+.-+++|++|          |+  
T Consensus       655 s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~  734 (807)
T KOG1094|consen  655 SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFM  734 (807)
T ss_pred             hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHH
Confidence                                     00        11111 1122236899999999999999999          54  


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ++.+.||.....++   ..+........+.      +..-...|.-++..+.+++++||..| .+|||+.
T Consensus       735 ~C~e~Py~~lt~e~---vven~~~~~~~~~------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe  795 (807)
T KOG1094|consen  735 LCREQPYSQLTDEQ---VVENAGEFFRDQG------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFE  795 (807)
T ss_pred             HHhhCchhhhhHHH---HHHhhhhhcCCCC------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHH
Confidence            45899998543221   2222222222221      11112344567778889999999999 9999973

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.68  E-value=4.1e-16  Score=121.32  Aligned_cols=152  Identities=12%  Similarity=0.178  Sum_probs=107.8

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCC-eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETE-VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~-~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+..++..+|++++.+.+           .+++ ..+|+||||++|||++.+..-+   .++....-+|+.+|    
T Consensus       115 ~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL  191 (364)
T KOG0581|consen  115 NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGL  191 (364)
T ss_pred             cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHH
Confidence            456667789999999999998           5666 5999999999999999998653   36667666777766    


Q ss_pred             ------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                          ...++ .+.+.+||..|||||-+++..|+.++          |+
T Consensus       192 ~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~  270 (364)
T KOG0581|consen  192 SYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL  270 (364)
T ss_pred             HHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHH
Confidence                                                11112 34678899999999999999999999          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++|+-||.... +......+.+.... .+.     .|.++.+   ....++....-.|++.+ ++||+-
T Consensus       271 a~GrfP~~~~~-~~~~~~~~Ll~~Iv-~~p-----pP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~  329 (364)
T KOG0581|consen  271 AIGRFPYPPPN-PPYLDIFELLCAIV-DEP-----PPRLPEG---EFSPEFRSFVSCCLRKDPSERPSA  329 (364)
T ss_pred             hhCCCCCCCcC-CCCCCHHHHHHHHh-cCC-----CCCCCcc---cCCHHHHHHHHHHhcCCcccCCCH
Confidence            99999998531 11222333222222 221     2333322   23445666667999999 999983

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=2.2e-16  Score=137.95  Aligned_cols=150  Identities=16%  Similarity=0.294  Sum_probs=111.5

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC----CCCCCHHHHHHHHHhC-
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE----EFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~----~~~l~~~~r~~i~~~i-  105 (208)
                      ..+.+...+|.+|..+|++++           .+....+|++|||++|+|..||++.+.    ...++-...+.++.+| 
T Consensus       733 ~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA  812 (1025)
T KOG1095|consen  733 LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVA  812 (1025)
T ss_pred             cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHh
Confidence            455677889999999999999           678899999999999999999998631    3357888888888888 


Q ss_pred             ------------------------------------CC---CCccccc--cccCCcCccCccccccCCCCcce-------
Q 048710          106 ------------------------------------LA---DQTYMTT--QVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 ------------------------------------~~---~~~~~~~--~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                                          ..   +......  ...=...|||||.+..+.||.||       
T Consensus       813 ~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGV  892 (1025)
T KOG1095|consen  813 KGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGV  892 (1025)
T ss_pred             hhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHH
Confidence                                                00   0111111  11225799999999999999999       


Q ss_pred             ---eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++| |..||.....   ..    +...+.++.         +.+.|..++..+++||.+||+.+ .+||++
T Consensus       893 llWEifslG~~PY~~~~n---~~----v~~~~~~gg---------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F  951 (1025)
T KOG1095|consen  893 LLWEIFSLGATPYPSRSN---FE----VLLDVLEGG---------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSF  951 (1025)
T ss_pred             HHHHHHhCCCCCCCCcch---HH----HHHHHHhCC---------ccCCCCCCChHHHHHHHHHccCChhhCccH
Confidence               9999 9999985421   11    222222221         22556678889999999999999 999997

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.60  E-value=3.5e-15  Score=122.07  Aligned_cols=148  Identities=17%  Similarity=0.265  Sum_probs=106.2

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+..+|.+|.++|++++           .....++||||+|+||+|.++|++..+  .++..+++.++.++      
T Consensus       200 ~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~Y  277 (474)
T KOG0194|consen  200 LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEY  277 (474)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHH
Confidence            34556789999999999999           778889999999999999999998655  58999999888887      


Q ss_pred             ------------------CCCC---------------ccccc-cccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ------------------LADQ---------------TYMTT-QVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ------------------~~~~---------------~~~~~-~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                        ..+.               ..... ...-+..|+|||.++.+.|++++          |+++
T Consensus       278 Lh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~  357 (474)
T KOG0194|consen  278 LHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFE  357 (474)
T ss_pred             HHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeec
Confidence                              0000               00011 11235899999999999999999          9999


Q ss_pred             -CCCCCCCCCccCCccHHHHHHHHH-hcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 -KEKPICLTTYEENKSLTTYFLRAM-KEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 -g~~p~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                       |..||.....      . .+...+ ..+-         +...+...+..+..++.+||..+ ++||+|.
T Consensus       358 ~g~~Py~g~~~------~-~v~~kI~~~~~---------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~  411 (474)
T KOG0194|consen  358 NGAEPYPGMKN------Y-EVKAKIVKNGY---------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMS  411 (474)
T ss_pred             cCCCCCCCCCH------H-HHHHHHHhcCc---------cCCCCCCCHHHHHHHHHHhccCChhhccCHH
Confidence             8889885421      1 122222 2221         11222244455667777999999 9999984

>PHA02988 hypothetical protein; Provisional

Probab=99.58  E-value=3.2e-15  Score=117.04  Aligned_cols=143  Identities=15%  Similarity=0.276  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cC----CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           48 VNKLINEVVILSQIN-----------LE----TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~----~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .+.|.+|+.+|.+++           .+    ....++||||+++|+|.+++.+..   .++|..+++++.++       
T Consensus        62 ~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~l  138 (283)
T PHA02988         62 IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNL  138 (283)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHH
Confidence            467899999999998           12    346889999999999999998643   57888888777766       


Q ss_pred             ------------------CCCC-------------ccccccccCCcCccCcccccc--CCCCcce----------eEecC
Q 048710          106 ------------------LADQ-------------TYMTTQVQGTFGYLDLQYFQS--SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ------------------~~~~-------------~~~~~~~~gt~~y~aPE~~~~--~~~~~ks----------E~~tg  142 (208)
                                        ..+.             ........||..|+|||++.+  ..++.++          |++||
T Consensus       139 H~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g  218 (283)
T PHA02988        139 YKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTG  218 (283)
T ss_pred             HhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHC
Confidence                              0000             000123457899999999976  6788888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +.||....      ...........+..     +.+    +......+.+++.+||+.+ ++||||+
T Consensus       219 ~~Pf~~~~------~~~~~~~i~~~~~~-----~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~  270 (283)
T PHA02988        219 KIPFENLT------TKEIYDLIINKNNS-----LKL----PLDCPLEIKCIVEACTSHDSIKRPNIK  270 (283)
T ss_pred             CCCCCCCC------HHHHHHHHHhcCCC-----CCC----CCcCcHHHHHHHHHHhcCCcccCcCHH
Confidence            99998432      11111212111111     111    1123345667888999999 9999973

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.58  E-value=1.8e-15  Score=123.90  Aligned_cols=140  Identities=16%  Similarity=0.248  Sum_probs=100.1

Q ss_pred             HHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------
Q 048710           51 LINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------  105 (208)
Q Consensus        51 f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------  105 (208)
                      =..+++-|++|+           .....++||||||+.|-|++.|+...   +++-..-+++.+||              
T Consensus       159 kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~hKIIH  235 (904)
T KOG4721|consen  159 KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLHKIIH  235 (904)
T ss_pred             hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHhhHhh
Confidence            357788888888           67788999999999999999998754   45555556666666              


Q ss_pred             -------------------C------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCC
Q 048710          106 -------------------L------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTT  150 (208)
Q Consensus       106 -------------------~------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~  150 (208)
                                         +      ...........||..|||||++...+.++|.          ||+||+.||... 
T Consensus       236 RDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV-  314 (904)
T KOG4721|consen  236 RDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV-  314 (904)
T ss_pred             hccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc-
Confidence                               0      0011112356799999999999999999998          999999999832 


Q ss_pred             ccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          151 YEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       151 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                       +..             .-+.-+-...+....|..++..+.-|+.+||+.. ..|||++
T Consensus       315 -dss-------------AIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFr  359 (904)
T KOG4721|consen  315 -DSS-------------AIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFR  359 (904)
T ss_pred             -chh-------------eeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHH
Confidence             111             0111122223334455666777778888999999 9999973

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.57  E-value=3.8e-15  Score=117.28  Aligned_cols=103  Identities=19%  Similarity=0.333  Sum_probs=80.1

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .++..+-...|+++|.+++           ...+..|||||||++|+|.+||+..+.   ++....-..+.|+       
T Consensus        49 ~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L  125 (429)
T KOG0595|consen   49 NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFL  125 (429)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHH
Confidence            3445567899999999999           788899999999999999999998753   5554443333333       


Q ss_pred             --------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                            .........+.+|++-|||||+++.++|+.|.          
T Consensus       126 ~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ily  205 (429)
T KOG0595|consen  126 HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILY  205 (429)
T ss_pred             HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHH
Confidence                                                  11112224578899999999999999999999          


Q ss_pred             eEecCCCCCCCC
Q 048710          138 NLLTKEKPICLT  149 (208)
Q Consensus       138 E~~tg~~p~~~~  149 (208)
                      |++||+.||...
T Consensus       206 q~l~g~~Pf~a~  217 (429)
T KOG0595|consen  206 QCLTGKPPFDAE  217 (429)
T ss_pred             HHHhCCCCcccc
Confidence            999999999854

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=4.7e-15  Score=122.69  Aligned_cols=148  Identities=14%  Similarity=0.224  Sum_probs=111.8

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      +.-..++|++|.-+|..++           .....+|||.|||.+|+|-+||++.... .++-...+.+|.||       
T Consensus       303 DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYL  381 (1157)
T KOG4278|consen  303 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYL  381 (1157)
T ss_pred             cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHH
Confidence            3445789999999999998           6677899999999999999999987665 56666777888888       


Q ss_pred             ----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                                        ..|.........-.+-|.|||.+....|+.||          |+.|
T Consensus       382 EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIAT  461 (1157)
T KOG4278|consen  382 EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT  461 (1157)
T ss_pred             HHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHh
Confidence                                              11111111233346899999999999999999          8888


Q ss_pred             -CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 -KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 -g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                       |..||-..       -...+..++.+|         .+-+.|+-|+..+.+||..||+=+ ++||++.
T Consensus       462 YGMsPYPGi-------dlSqVY~LLEkg---------yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFa  514 (1157)
T KOG4278|consen  462 YGMSPYPGI-------DLSQVYGLLEKG---------YRMDGPEGCPPKVYELMRACWNWSPSDRPSFA  514 (1157)
T ss_pred             cCCCCCCCc-------cHHHHHHHHhcc---------ccccCCCCCCHHHHHHHHHHhcCCcccCccHH
Confidence             99998732       134455555444         233455667788999999999999 9999873

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.55  E-value=8.3e-15  Score=113.49  Aligned_cols=145  Identities=13%  Similarity=0.254  Sum_probs=98.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .++|.....++.++         
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~  125 (266)
T cd05064          48 KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE  125 (266)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            33467999999999987           567889999999999999999986543  58899888888877         


Q ss_pred             ---------------CC-------CC--------c--cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 ---------------LA-------DQ--------T--YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 ---------------~~-------~~--------~--~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                     ..       +.        .  .......++..|+|||...+..++.++          |+++ |
T Consensus       126 ~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g  205 (266)
T cd05064         126 MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYG  205 (266)
T ss_pred             CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCC
Confidence                           00       00        0  000122346789999999988888888          8664 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..||.....      .. +.....++...         ..+...+..+.+++..||+.+ ++||++.
T Consensus       206 ~~p~~~~~~------~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~c~~~~p~~RP~~~  256 (266)
T cd05064         206 ERPYWDMSG------QD-VIKAVEDGFRL---------PAPRNCPNLLHQLMLDCWQKERGERPRFS  256 (266)
T ss_pred             CCCcCcCCH------HH-HHHHHHCCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCCCHH
Confidence            999874321      11 11122222110         112233445778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.55  E-value=9.7e-16  Score=118.38  Aligned_cols=145  Identities=22%  Similarity=0.382  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|++.+.+++           ...+..++|+||+++|+|.++|+..... .++|.++.+|+.++         
T Consensus        43 ~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~  121 (259)
T PF07714_consen   43 EEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKE-PLSEQQRLSIAIQIAEALSYLHS  121 (259)
T ss_dssp             HHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTT-TSBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence            34678999999999988           6566799999999999999999986333 69999999999998         


Q ss_pred             ------------------------CC---------CCccccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 ------------------------LA---------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 ------------------------~~---------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                              ..         ..........+...|+|||.+.+..++.++          |++| 
T Consensus       122 ~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~  201 (259)
T PF07714_consen  122 NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTL  201 (259)
T ss_dssp             TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                    00         001111234467899999999988889888          9999 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.|+...      ........ ..++....         .+......+..++..||+.+ ++||||
T Consensus       202 ~~~p~~~~------~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~li~~C~~~~p~~RPs~  252 (259)
T PF07714_consen  202 GKFPFSDY------DNEEIIEK-LKQGQRLP---------IPDNCPKDIYSLIQQCWSHDPEKRPSF  252 (259)
T ss_dssp             SSGTTTTS------CHHHHHHH-HHTTEETT---------SBTTSBHHHHHHHHHHT-SSGGGS--H
T ss_pred             cccccccc------cccccccc-ccccccce---------eccchhHHHHHHHHHHcCCChhhCcCH
Confidence            67887632      12222222 23332211         11122345678888999999 999997

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=6.2e-15  Score=124.94  Aligned_cols=149  Identities=14%  Similarity=0.228  Sum_probs=106.7

Q ss_pred             ccchhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           42 LIYEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....++..+|+.|+-+|++++          .-.+.+.||.+||+.|+|.+|++.++.  .+.-...+.|+.||      
T Consensus       736 ~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~Y  813 (1177)
T KOG1025|consen  736 FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKY  813 (1177)
T ss_pred             cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHH
Confidence            334445678999999999998          334448899999999999999998765  34444444444444      


Q ss_pred             -----------------------------------CC-CCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 -----------------------------------LA-DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 -----------------------------------~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                         .+ +.........-.+.|||-|.+..+.++.+|          |+
T Consensus       814 Le~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl  893 (1177)
T KOG1025|consen  814 LEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL  893 (1177)
T ss_pred             HHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence                                               11 112222233336899999999999999999          99


Q ss_pred             ec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          140 LT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       140 ~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +| |..||...+.       +.+-..++.|         -+..+|+.+..+++.++..||..| ..||+++
T Consensus       894 mTFGa~Py~gi~~-------~eI~dlle~g---------eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fk  948 (1177)
T KOG1025|consen  894 MTFGAKPYDGIPA-------EEIPDLLEKG---------ERLSQPPICTIDVYMVMVKCWMIDADSRPTFK  948 (1177)
T ss_pred             HhcCCCccCCCCH-------HHhhHHHhcc---------ccCCCCCCccHHHHHHHHHHhccCcccCccHH
Confidence            99 9999985532       2233334333         234677788889999999999999 9999863

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.53  E-value=3.1e-14  Score=109.29  Aligned_cols=146  Identities=19%  Similarity=0.317  Sum_probs=100.3

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ......|.+|++++++++           .+.+..++|+||+++++|.++++..... .+++.+...++.++        
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~~l~~al~~lH  118 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGR-PLPEDQVWRFFIQILLGLAHLH  118 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            344578999999999987           6678899999999999999999875332 58888877777766        


Q ss_pred             ----------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ----------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                      ..       +         .........|+..|+|||+..+..++.++          |++||+
T Consensus       119 ~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  198 (256)
T cd08529         119 SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK  198 (256)
T ss_pred             HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence                            00       0         00111233578899999999988888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....   .    .........+...         ..+......+.+++.+||+.+ ++||++
T Consensus       199 ~p~~~~~---~----~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  247 (256)
T cd08529         199 HPFDANN---Q----GALILKIIRGVFP---------PVSQMYSQQLAQLIDQCLTKDYRQRPDT  247 (256)
T ss_pred             CCCCCCC---H----HHHHHHHHcCCCC---------CCccccCHHHHHHHHHHccCCcccCcCH
Confidence            9987432   1    1111112222111         111122345677888999999 999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=1.2e-14  Score=109.89  Aligned_cols=150  Identities=19%  Similarity=0.316  Sum_probs=106.2

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCC-----CCCCCHHHHHHHHH
Q 048710           42 LIYEGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNE-----EFPIAWEMQLHIVV  103 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-----~~~l~~~~r~~i~~  103 (208)
                      .++.+..++..+|+.+|++|+             .++..++||||||+.|+|...|+.-++     +...-|..-++++.
T Consensus        56 ~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~  135 (375)
T KOG0591|consen   56 MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCR  135 (375)
T ss_pred             hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHH
Confidence            367778889999999999999             444559999999999999999975221     11234554444444


Q ss_pred             hC----------------------------------------CCCCccccccccCCcCccCccccccCCCCcce------
Q 048710          104 DS----------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       104 ~i----------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                      .+                                        -......+.+.+||+.||+||.+....|+.||      
T Consensus       136 AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslG  215 (375)
T KOG0591|consen  136 ALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLG  215 (375)
T ss_pred             HHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHH
Confidence            33                                        11122334578899999999999999999999      


Q ss_pred             ----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                          ||..-..||...      ++ ..+...+..++.+.+-|        ..-..++.+|+..|+..+ ..||+
T Consensus       216 CllyEMcaL~~PF~g~------n~-~~L~~KI~qgd~~~~p~--------~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  216 CLLYEMCALQSPFYGD------NL-LSLCKKIEQGDYPPLPD--------EHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             HHHHHHHhcCCCcccc------cH-HHHHHHHHcCCCCCCcH--------HHhhhHHHHHHHHHccCCcccCCC
Confidence                999999999842      12 22444555565432211        233456778888999999 99997

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.51  E-value=2.9e-14  Score=111.23  Aligned_cols=146  Identities=13%  Similarity=0.252  Sum_probs=99.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLHIV  102 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~i~  102 (208)
                      ...+|.+|+.++.+++           ...+..+++|||+++|+|.+++.....             ...+++.....++
T Consensus        51 ~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  130 (283)
T cd05048          51 VQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA  130 (283)
T ss_pred             HHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHH
Confidence            3467999999999987           566778999999999999999975421             1247788787777


Q ss_pred             HhC------------------------CC-------C--C---------ccccccccCCcCccCccccccCCCCcce---
Q 048710          103 VDS------------------------LA-------D--Q---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS---  137 (208)
Q Consensus       103 ~~i------------------------~~-------~--~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks---  137 (208)
                      .++                        ..       +  .         ........+++.|+|||.+.+..++.++   
T Consensus       131 ~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~  210 (283)
T cd05048         131 IQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIW  210 (283)
T ss_pred             HHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHH
Confidence            777                        00       0  0         0011123457789999999888888888   


Q ss_pred             -------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                             |++| |..||......      . +...+..+...         ..+...+..+.+|+.+||+.+ .+||+++
T Consensus       211 slG~il~el~~~g~~p~~~~~~~------~-~~~~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~  274 (283)
T cd05048         211 SFGVVLWEIFSYGLQPYYGFSNQ------E-VIEMIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFK  274 (283)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHH
Confidence                   9988 99998743211      1 22222222221         112234456778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.50  E-value=2e-13  Score=106.87  Aligned_cols=145  Identities=17%  Similarity=0.183  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|.+|+.++.+++           .+.+..++|+||+++|+|.+++...... .+++.+...++.++            
T Consensus        45 ~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05631          45 AMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP-GFDEQRAIFYAAELCCGLEDLQRERI  123 (285)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            46889999999988           5677899999999999999998754332 58888888777776            


Q ss_pred             ------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                  ..       +        .........||.+|+|||++.+..++.++          |++||+.||..
T Consensus       124 iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  203 (285)
T cd05631         124 VYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK  203 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence                        00       0        00112345689999999999988888887          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....   .....+........          ...+......+.+++.+||+.+ .+||+.
T Consensus       204 ~~~~---~~~~~~~~~~~~~~----------~~~~~~~s~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05631         204 RKER---VKREEVDRRVKEDQ----------EEYSEKFSEDAKSICRMLLTKNPKERLGC  250 (285)
T ss_pred             CCcc---hhHHHHHHHhhccc----------ccCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence            3211   11111111111110          0111122335567788999999 999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.49  E-value=3.9e-14  Score=109.45  Aligned_cols=145  Identities=16%  Similarity=0.250  Sum_probs=96.8

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+|.+|++++.+++           ...+..++||||+++|+|.+++...... .++|..+..++.++          
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~  123 (263)
T cd05052          45 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKK  123 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467999999999987           5567789999999999999999764432 58899888887777          


Q ss_pred             --------------C-------CC---------Cc-cccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 --------------L-------AD---------QT-YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 --------------~-------~~---------~~-~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                    .       .+         .. .......++.+|+|||.+.+..++.++          |++| |.
T Consensus       124 ~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~  203 (263)
T cd05052         124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM  203 (263)
T ss_pred             CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence                          0       00         00 000112235689999999888888888          9998 88


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .|+....      ... .......+.     .+..    +...+..+.+++.+||+.+ ++||++.
T Consensus       204 ~p~~~~~------~~~-~~~~~~~~~-----~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~  253 (263)
T cd05052         204 SPYPGID------LSQ-VYELLEKGY-----RMER----PEGCPPKVYELMRACWQWNPSDRPSFA  253 (263)
T ss_pred             CCCCCCC------HHH-HHHHHHCCC-----CCCC----CCCCCHHHHHHHHHHccCCcccCCCHH
Confidence            8876321      111 111221111     1111    1122345677888999999 9999973

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.49  E-value=4.5e-14  Score=110.75  Aligned_cols=145  Identities=14%  Similarity=0.271  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHHHHH
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLHIVV  103 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~i~~  103 (208)
                      .+.|.+|+.++.+++           ...+..++||||+++|+|.+++.....             ...++|..+.+++.
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  130 (291)
T cd05094          51 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS  130 (291)
T ss_pred             HHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence            467999999999988           666779999999999999999975421             11488999998888


Q ss_pred             hC------------------------C-------CC--C---------ccccccccCCcCccCccccccCCCCcce----
Q 048710          104 DS------------------------L-------AD--Q---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       104 ~i------------------------~-------~~--~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                      ++                        .       .+  .         ........|+..|+|||.+.+..++.++    
T Consensus       131 ~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  210 (291)
T cd05094         131 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS  210 (291)
T ss_pred             HHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHH
Confidence            87                        0       00  0         0011233457789999999888888888    


Q ss_pred             ------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                            |++| |..||.....      .+ +......+....         .+...+..+.++..+||+.+ ++||+++
T Consensus       211 lG~il~el~t~g~~p~~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~  273 (291)
T cd05094         211 FGVILWEIFTYGKQPWFQLSN------TE-VIECITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIK  273 (291)
T ss_pred             HHHHHHHHHhCCCCCCCCCCH------HH-HHHHHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHH
Confidence                  9999 9999864321      11 122222332211         11122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.49  E-value=4e-14  Score=108.90  Aligned_cols=143  Identities=17%  Similarity=0.285  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|+.++.+++           ...+..++||||+++|+|.++++....  .++|.....++.++           
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05114          43 EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNS  120 (256)
T ss_pred             HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457999999999998           666778999999999999999986433  47888888887776           


Q ss_pred             -------------CC-------C----------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LA-------D----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~-------~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..       +          .........++..|+|||.+.+..++.++          |++| |+.
T Consensus       121 i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~  200 (256)
T cd05114         121 FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKM  200 (256)
T ss_pred             ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCC
Confidence                         00       0          00001122345689999999888888877          8898 888


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....      ....+. ...++..  ...+.       .....+.+++.+||+.+ ++||+|+
T Consensus       201 p~~~~~------~~~~~~-~i~~~~~--~~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~  249 (256)
T cd05114         201 PFEKKS------NYEVVE-MISRGFR--LYRPK-------LASMTVYEVMYSCWHEKPEGRPTFA  249 (256)
T ss_pred             CCCCCC------HHHHHH-HHHCCCC--CCCCC-------CCCHHHHHHHHHHccCCcccCcCHH
Confidence            986321      111111 1222211  11111       11235678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.49  E-value=6e-14  Score=108.16  Aligned_cols=144  Identities=16%  Similarity=0.302  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ....|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++...+.++.++           
T Consensus        38 ~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~  115 (257)
T cd05115          38 VRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGKN  115 (257)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            3467999999999998          456678999999999999999976433  58888888888877           


Q ss_pred             -------------CC-------C--Cc--------cc--cccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 -------------LA-------D--QT--------YM--TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 -------------~~-------~--~~--------~~--~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                   ..       +  .+        ..  .....++..|+|||...+..++.++          |+++ |
T Consensus       116 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g  195 (257)
T cd05115         116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYG  195 (257)
T ss_pred             eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCC
Confidence                         00       0  00        00  1111235789999999888888877          8886 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..||.....      .+ +......+..         ...+..+...+.+++.+||+.+ ++||+|.
T Consensus       196 ~~p~~~~~~------~~-~~~~~~~~~~---------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~  246 (257)
T cd05115         196 QKPYKKMKG------PE-VMSFIEQGKR---------LDCPAECPPEMYALMKDCWIYKWEDRPNFA  246 (257)
T ss_pred             CCCcCcCCH------HH-HHHHHHCCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            999874321      11 1222222221         1122233456667888999999 9999973

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.49  E-value=5.1e-14  Score=116.50  Aligned_cols=148  Identities=14%  Similarity=0.205  Sum_probs=113.5

Q ss_pred             ccchhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           42 LIYEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      .++....+.|+.|..+|++++          ......+||||.++-|.|..||..++.  .|+....+..+.++      
T Consensus       429 d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaY  506 (974)
T KOG4257|consen  429 DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAY  506 (974)
T ss_pred             CCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHH
Confidence            355666789999999999998          888899999999999999999987654  46666655555555      


Q ss_pred             -----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                         ..+....++...=++-|||||.+..++|+..|          |++
T Consensus       507 LeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl  586 (974)
T KOG4257|consen  507 LESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEIL  586 (974)
T ss_pred             HHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHH
Confidence                                               11222233444447899999999999999999          877


Q ss_pred             c-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 T-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      . |..||...                .+.++.-.+...-+.++|+.|+..+..|+.+||+-| .+||.+
T Consensus       587 ~lGvkPfqgv----------------kNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrf  639 (974)
T KOG4257|consen  587 SLGVKPFQGV----------------KNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRF  639 (974)
T ss_pred             HhcCCccccc----------------cccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcH
Confidence            7 99999832                233333344444455778889999999999999999 999986

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.49  E-value=4.6e-14  Score=108.76  Aligned_cols=145  Identities=12%  Similarity=0.226  Sum_probs=97.8

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++.+|+.++.+++           ...+..++||||+++|+|.+++++.... .++|.+...++.++          
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~  123 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQ-VLPVASLIDMACQVAEGMAYLEEQ  123 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467899999999998           6667789999999999999999875433 68898888887776          


Q ss_pred             --------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 --------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 --------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                    ..+                .........++..|++||...+..++.++          |++| |+.
T Consensus       124 ~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence                          000                00011122356789999999888888877          8888 888


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||....      ... +......+..     +    ..+......+.+++.+||+.+ ++|||++
T Consensus       204 p~~~~~------~~~-~~~~~~~~~~-----~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  252 (261)
T cd05148         204 PYPGMN------NHE-VYDQITAGYR-----M----PCPAKCPQEIYKIMLECWAAEPEDRPSFK  252 (261)
T ss_pred             CCCcCC------HHH-HHHHHHhCCc-----C----CCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence            986332      111 1111111111     1    111223345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.48  E-value=7e-14  Score=108.20  Aligned_cols=144  Identities=13%  Similarity=0.220  Sum_probs=96.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|++++.+++           ...+..++||||+++|+|.+++.++..  .++|.+...++.++          
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~  126 (268)
T cd05063          49 QRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDM  126 (268)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999887           666788999999999999999986543  58899888888776          


Q ss_pred             --------------CCCC-----------------cc--ccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 --------------LADQ-----------------TY--MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 --------------~~~~-----------------~~--~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                    ..+.                 ..  .......+..|+|||.+.+..++.++          |++| 
T Consensus       127 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~  206 (268)
T cd05063         127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSF  206 (268)
T ss_pred             CeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhC
Confidence                          0000                 00  00011124579999999888888888          8887 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |..||.....      ..... ....+.         ..+.+.+....+.+++.+||+.+ ++||+|.
T Consensus       207 g~~p~~~~~~------~~~~~-~i~~~~---------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~  258 (268)
T cd05063         207 GERPYWDMSN------HEVMK-AINDGF---------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFV  258 (268)
T ss_pred             CCCCCCcCCH------HHHHH-HHhcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            9999864321      11111 121111         01111123456778999999999 9999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=3.9e-13  Score=105.23  Aligned_cols=145  Identities=18%  Similarity=0.199  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|.+|+.++.+++           ...+..++||||+++|+|.+++...... .+++.....++.++            
T Consensus        45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05605          45 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNP-GFDEERAVFYAAEITCGLEDLHRERI  123 (285)
T ss_pred             HHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            46788999999987           5667899999999999999999764332 58888887777766            


Q ss_pred             ------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                  ..       +        .........||..|+|||++.+..++.++          |+++|..||..
T Consensus       124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~  203 (285)
T cd05605         124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ  203 (285)
T ss_pred             EecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence                        00       0        00011234689999999999888888877          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..   .......+........          ...+......+.+++..||+.+ ++||++
T Consensus       204 ~~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05605         204 RK---EKVKREEVERRVKEDQ----------EEYSEKFSEAARSICRQLLTKDPGFRLGC  250 (285)
T ss_pred             Cc---hhhHHHHHHHHhhhcc----------cccCcccCHHHHHHHHHHccCCHHHhcCC
Confidence            32   1111112222221111          1112223345667888999999 999953

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.47  E-value=3.7e-13  Score=107.49  Aligned_cols=147  Identities=15%  Similarity=0.206  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++.++.            ...+..|+||||+++|+|.+++....   .+++..+..++.++          
T Consensus        39 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~  115 (327)
T cd05617          39 IDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER  115 (327)
T ss_pred             HHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456888999888774            56788999999999999999987543   58888888777776          


Q ss_pred             -----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +-+       .........||+.|+|||++.+..++.++          |++||..|
T Consensus       116 ~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~p  195 (327)
T cd05617         116 GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP  195 (327)
T ss_pred             CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCC
Confidence                                   000       01112245689999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.............++.........      .++..    ....+.++..+|++.+ ++||+.
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~----~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         196 FDIITDNPDMNTEDYLFQVILEKPI------RIPRF----LSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCccCCCcccccHHHHHHHHHhCCC------CCCCC----CCHHHHHHHHHHhccCHHHcCCC
Confidence            9743333333333444444433211      11111    1233457777999999 999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=1.7e-13  Score=111.88  Aligned_cols=142  Identities=15%  Similarity=0.291  Sum_probs=99.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+-..+|+.+|...+           ...+.++.|||||++|+|-+.+-+.    .++..+...|+.++          
T Consensus       313 ~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~  388 (550)
T KOG0578|consen  313 KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR  388 (550)
T ss_pred             chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc
Confidence            3456789999999988           5669999999999999999998764    37778777787777          


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    .........+++||+.|||||+.....|++|.          ||+-|+.|
T Consensus       389 gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPP  468 (550)
T KOG0578|consen  389 GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPP  468 (550)
T ss_pred             ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCC
Confidence                                          11112245688999999999999999999998          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCc-HHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGG-KDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |-...+     +.+ ++-...+| .     |.+..... ...+.++.   .+|++.| ++||+.
T Consensus       469 YlnE~P-----lrA-lyLIa~ng-~-----P~lk~~~klS~~~kdFL---~~cL~~dv~~RasA  517 (550)
T KOG0578|consen  469 YLNENP-----LRA-LYLIATNG-T-----PKLKNPEKLSPELKDFL---DRCLVVDVEQRASA  517 (550)
T ss_pred             ccCCCh-----HHH-HHHHhhcC-C-----CCcCCccccCHHHHHHH---HHHhhcchhcCCCH
Confidence            984322     111 11111222 1     22211110 23444444   4999999 999984

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.47  E-value=7.1e-14  Score=107.77  Aligned_cols=144  Identities=13%  Similarity=0.251  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           ...+..++|+||+++|+|.++++..... .+++.++..++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          45 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999987           6677789999999999999999764332 57888887777766           


Q ss_pred             -------------CC-------C---------C-ccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LA-------D---------Q-TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~-------~---------~-~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..       +         . ........++..|+|||+..+..++.++          |++| |..
T Consensus       124 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~  203 (261)
T cd05072         124 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKI  203 (261)
T ss_pred             eeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCC
Confidence                         00       0         0 0001122346789999999888888777          9998 899


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||....   ....    ......+..     .....    .....+.+++.+||+.+ ++||+++
T Consensus       204 p~~~~~---~~~~----~~~~~~~~~-----~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~  252 (261)
T cd05072         204 PYPGMS---NSDV----MSALQRGYR-----MPRME----NCPDELYDIMKTCWKEKAEERPTFD  252 (261)
T ss_pred             CCCCCC---HHHH----HHHHHcCCC-----CCCCC----CCCHHHHHHHHHHccCCcccCcCHH
Confidence            986321   1111    111212211     00111    12345677888999999 9999973

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.47  E-value=1.2e-13  Score=106.76  Aligned_cols=145  Identities=14%  Similarity=0.298  Sum_probs=97.9

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .++|.+..+++.++         
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~  124 (266)
T cd05033          47 KQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE  124 (266)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567999999999987           567789999999999999999987544  58899888888776         


Q ss_pred             ---------------CC------------------CCccccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 ---------------LA------------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 ---------------~~------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                     ..                  ..........++..|+|||...+..++.++          |++| 
T Consensus       125 ~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~  204 (266)
T cd05033         125 MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSY  204 (266)
T ss_pred             CCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHcc
Confidence                           00                  000011122345789999999888888887          8787 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |..||....   ...+    ......+...         +.+......+.+++.+||+.+ ++||++.
T Consensus       205 g~~p~~~~~---~~~~----~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~  256 (266)
T cd05033         205 GERPYWDMS---NQDV----IKAVEDGYRL---------PPPMDCPSALYQLMLDCWQKDRNERPTFS  256 (266)
T ss_pred             CCCCCCCCC---HHHH----HHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            998986321   1111    1222221110         111122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.47  E-value=8.2e-14  Score=107.40  Aligned_cols=144  Identities=15%  Similarity=0.216  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+|.+|+.++.+++          ...+..++||||+++|+|.+++++.... .+++.++..++.++            
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05070          45 PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNY  123 (260)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457999999999998          4556689999999999999999864332 58898888888777            


Q ss_pred             ------------CC-------CC----------ccccccccCCcCccCccccccCCCCcce----------eEec-CCCC
Q 048710          106 ------------LA-------DQ----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKP  145 (208)
Q Consensus       106 ------------~~-------~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p  145 (208)
                                  ..       +.          ........++..|+|||...+..++.++          |++| |..|
T Consensus       124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  203 (260)
T cd05070         124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCC
Confidence                        00       00          0001112345689999999888888877          8898 8888


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |....      ..+... ....+..         .+.+......+.+++.+||+.+ ++|||+.
T Consensus       204 ~~~~~------~~~~~~-~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  251 (260)
T cd05070         204 YPGMN------NREVLE-QVERGYR---------MPCPQDCPISLHELMLQCWKKDPEERPTFE  251 (260)
T ss_pred             CCCCC------HHHHHH-HHHcCCC---------CCCCCcCCHHHHHHHHHHcccCcccCcCHH
Confidence            86321      111111 1111110         1112223345778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.47  E-value=1.4e-13  Score=110.28  Aligned_cols=146  Identities=14%  Similarity=0.260  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHhhc-c------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------------------
Q 048710           48 VNKLINEVVILSQI-N------------LETEVLLLVYEFISNGTVYQYINNQNE-------------------------   89 (208)
Q Consensus        48 ~~~f~~E~~~l~~l-~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------------------   89 (208)
                      ...|.+|+.++.++ +            ...+..++||||+++|+|.++|.....                         
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (338)
T cd05102          54 HKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV  133 (338)
T ss_pred             HHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence            45799999999988 3            234568999999999999999975321                         


Q ss_pred             ----------------------------------CCCCCHHHHHHHHHhC------------------------CC----
Q 048710           90 ----------------------------------EFPIAWEMQLHIVVDS------------------------LA----  107 (208)
Q Consensus        90 ----------------------------------~~~l~~~~r~~i~~~i------------------------~~----  107 (208)
                                                        ...+++...+.++.++                        ..    
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~  213 (338)
T cd05102         134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV  213 (338)
T ss_pred             ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence                                              1247777777777766                        00    


Q ss_pred             -----CCc---------cccccccCCcCccCccccccCCCCcce----------eEec-CCCCCCCCCccCCccHHHHHH
Q 048710          108 -----DQT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPICLTTYEENKSLTTYFL  162 (208)
Q Consensus       108 -----~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~  162 (208)
                           +..         .......+|..|+|||++.+..++.++          |++| |..||......      ..+.
T Consensus       214 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~------~~~~  287 (338)
T cd05102         214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN------EEFC  287 (338)
T ss_pred             EEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc------HHHH
Confidence                 000         011123456789999999988888888          8887 99998743211      1122


Q ss_pred             HHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          163 RAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       163 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .....+...     ..    +......+.+++.+||+.+ ++|||+.
T Consensus       288 ~~~~~~~~~-----~~----~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         288 QRLKDGTRM-----RA----PENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             HHHhcCCCC-----CC----CCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            222222211     11    1122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.47  E-value=8.2e-14  Score=107.30  Aligned_cols=143  Identities=15%  Similarity=0.232  Sum_probs=95.3

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+.++.+++          ...+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        39 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~  115 (257)
T cd05116          39 LKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETN  115 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4568999999999988          44667899999999999999997543   47888888877777           


Q ss_pred             -------------CC-------C--Cc----------cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 -------------LA-------D--QT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 -------------~~-------~--~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                   ..       |  ..          .......++..|+|||.+....++.++          |++| |
T Consensus       116 i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g  195 (257)
T cd05116         116 FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYG  195 (257)
T ss_pred             EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence                         00       0  00          001112235789999999877777777          9998 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..||.....   ..+    ......+...     .+    +......+.+++.+||+.+ ++||+|+
T Consensus       196 ~~p~~~~~~---~~~----~~~i~~~~~~-----~~----~~~~~~~l~~li~~~~~~~p~~Rp~~~  246 (257)
T cd05116         196 QKPYKGMKG---NEV----TQMIESGERM-----EC----PQRCPPEMYDLMKLCWTYGVDERPGFA  246 (257)
T ss_pred             CCCCCCCCH---HHH----HHHHHCCCCC-----CC----CCCCCHHHHHHHHHHhccCchhCcCHH
Confidence            999874311   111    1222222211     11    1122345667888999999 9999973

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=5.8e-13  Score=105.63  Aligned_cols=141  Identities=17%  Similarity=0.217  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+..|+.++.+++           .+.+..|+|+||+++|+|.+++....   .+++.....++.++          
T Consensus        36 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~  112 (312)
T cd05585          36 EVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREG---RFDLSRARFYTAELLCALENLHKF  112 (312)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3457889999999888           67788999999999999999998643   47888777777666          


Q ss_pred             --------------CC----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..                ..........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       113 ~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p  192 (312)
T cd05585         113 NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPP  192 (312)
T ss_pred             CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCC
Confidence                          00                001112345689999999999988888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ......... .+..      .+..    .....+.++...||+.+ .+||+.
T Consensus       193 f~~~~------~~~~~~~~~-~~~~------~~~~----~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         193 FYDEN------VNEMYRKIL-QEPL------RFPD----GFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             cCCCC------HHHHHHHHH-cCCC------CCCC----cCCHHHHHHHHHHcCCCHHHcCCC
Confidence            87321      112222222 2111      1111    12234557777999999 999874

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=1.2e-13  Score=106.62  Aligned_cols=144  Identities=12%  Similarity=0.168  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .++|.+|+.++.+++           ...+..++||||+++|+|.+++..... ..++|.....++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          45 PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467999999999987           666778999999999999999986542 258899988888877           


Q ss_pred             -------------CCCC--------------ccc---cccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LADQ--------------TYM---TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~~~--------------~~~---~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..+.              ...   .....++..|+|||++.+..++.++          |++| |+.
T Consensus       124 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~  203 (261)
T cd05068         124 YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRM  203 (261)
T ss_pred             eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence                         0000              000   0111123579999999888888888          8998 898


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....      . ..+......+..         ...+......+.+++.+||+.+ ++||+|.
T Consensus       204 p~~~~~------~-~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~  252 (261)
T cd05068         204 PYPGMT------N-AEVLQQVDQGYR---------MPCPPGCPKELYDIMLDCWKEDPDDRPTFE  252 (261)
T ss_pred             CCCCCC------H-HHHHHHHHcCCC---------CCCCCcCCHHHHHHHHHHhhcCcccCCCHH
Confidence            886321      1 111112211110         0111223356778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.46  E-value=1.3e-13  Score=107.70  Aligned_cols=157  Identities=17%  Similarity=0.197  Sum_probs=98.1

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|++++.+++             ......++||||+++|+|.+++.+.    .++|.++..++.++        
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH  124 (283)
T cd05080          49 NTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLH  124 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999997             2245688999999999999999754    48899998888887        


Q ss_pred             ----------------CCCC---------c----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------LADQ---------T----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~~~~---------~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      ..+.         .          .......++..|++||......++.++          |++
T Consensus       125 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~  204 (283)
T cd05080         125 SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL  204 (283)
T ss_pred             HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH
Confidence                            0000         0          000112345679999999888888888          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||..|+...... ................+.+.++.......+......+.+++..||+.+ ++||||+
T Consensus       205 tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~  272 (283)
T cd05080         205 THCDSKQSPPKK-FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFR  272 (283)
T ss_pred             hCCCCCCCCcch-hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHH
Confidence            999997632110 000000000000000111122222222223334456778888999999 9999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.45  E-value=3.6e-13  Score=106.28  Aligned_cols=155  Identities=17%  Similarity=0.291  Sum_probs=97.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC----------------CCCCCHHH
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE----------------EFPIAWEM   97 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~----------------~~~l~~~~   97 (208)
                      .....+|.+|+.++.+++           .+.+..++|+||+++|+|.+++.....                ...++|..
T Consensus        60 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (304)
T cd05096          60 KNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSS  139 (304)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHH
Confidence            334568999999999988           456779999999999999999865311                12467888


Q ss_pred             HHHHHHhC------------------------C-------CC--Cc---------cccccccCCcCccCccccccCCCCc
Q 048710           98 QLHIVVDS------------------------L-------AD--QT---------YMTTQVQGTFGYLDLQYFQSSPFTE  135 (208)
Q Consensus        98 r~~i~~~i------------------------~-------~~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~  135 (208)
                      ..+++.++                        .       .|  ..         .......++..|+|||++.++.++.
T Consensus       140 ~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  219 (304)
T cd05096         140 LLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTT  219 (304)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCc
Confidence            88888777                        0       00  00         0011233477899999998888888


Q ss_pred             ce----------eEec--CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-C
Q 048710          136 KS----------NLLT--KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-E  202 (208)
Q Consensus       136 ks----------E~~t--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~  202 (208)
                      ++          |+++  +..|+....   .......+......... .. .    ...++.++..+.+++.+||+.+ +
T Consensus       220 ~~Dv~slG~~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~~~~~li~~cl~~~p~  290 (304)
T cd05096         220 ASDVWAFGVTLWEILMLCKEQPYGELT---DEQVIENAGEFFRDQGR-QV-Y----LFRPPPCPQGLYELMLQCWSRDCR  290 (304)
T ss_pred             hhhhHHHHHHHHHHHHccCCCCCCcCC---HHHHHHHHHHHhhhccc-cc-c----ccCCCCCCHHHHHHHHHHccCCch
Confidence            88          7765  566766322   11222222222211110 00 0    0111223456778889999999 9


Q ss_pred             CCCCCC
Q 048710          203 KKPTMR  208 (208)
Q Consensus       203 ~RPsm~  208 (208)
                      +||||.
T Consensus       291 ~RPs~~  296 (304)
T cd05096         291 ERPSFS  296 (304)
T ss_pred             hCcCHH
Confidence            999973

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.45  E-value=1.1e-12  Score=102.51  Aligned_cols=147  Identities=15%  Similarity=0.111  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...|..|++++.+++           ...+..++||||+++|+|.+++.... ....+++.....++.++          
T Consensus        37 ~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  116 (280)
T cd05608          37 YEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR  116 (280)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356889999999988           56678999999999999999886432 22258888888877776          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       +         .........||..|+|||.+.+..++.++          |++||+.|
T Consensus       117 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p  196 (280)
T cd05608         117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGP  196 (280)
T ss_pred             CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence                          00       0         00111234688999999999998888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.......   ....+......+        .+  ..+......+.++...||+.+ ++||+.
T Consensus       197 f~~~~~~~---~~~~~~~~~~~~--------~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         197 FRARGEKV---ENKELKQRILND--------SV--TYPDKFSPASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             CCCCCcch---hHHHHHHhhccc--------CC--CCcccCCHHHHHHHHHHhcCCHHHhcCC
Confidence            97432110   001111111111        00  111223345567778999999 999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.45  E-value=3.8e-13  Score=107.57  Aligned_cols=99  Identities=20%  Similarity=0.295  Sum_probs=75.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+++|.+++           ...+..++||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        46 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          46 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhc
Confidence            3467999999999987           56778999999999999999997643   36666665555544          


Q ss_pred             ---------------CC-------C-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ---------------LA-------D-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------~~-------~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                     ..       +       .........||..|+|||.+.+..++.++          |++||+.||
T Consensus       123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~  202 (331)
T cd06649         123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPI  202 (331)
T ss_pred             CCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence                           00       0       00111234589999999999988888888          999999999


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       203 ~~  204 (331)
T cd06649         203 PP  204 (331)
T ss_pred             CC
Confidence            64

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.44  E-value=2.3e-13  Score=111.50  Aligned_cols=39  Identities=15%  Similarity=0.445  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      .+.|.+|+.++.+++            .+.+..||||||+++|+|.++|+.
T Consensus        84 ~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105          84 KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence            467999999999984            667889999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.44  E-value=8.1e-13  Score=105.62  Aligned_cols=146  Identities=15%  Similarity=0.239  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++.++.            .+.+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        39 ~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~  115 (329)
T cd05588          39 IDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER  115 (329)
T ss_pred             HHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456788999988773            56788999999999999999997643   58888888777766          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       |         .........||..|+|||++.+..++.++          |++||+.|
T Consensus       116 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~P  195 (329)
T cd05588         116 GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCC
Confidence                          00       0         01112245689999999999988888888          99999999


Q ss_pred             CCCCCccC--CccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEE--NKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |.......  ......+..+....+..      .++...    ...+.++..+|++.+ .+||+
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~~  249 (329)
T cd05588         196 FDIVGMSDNPDQNTEDYLFQVILEKQI------RIPRSL----SVKASSVLKGFLNKDPKERLG  249 (329)
T ss_pred             cccccccccccccchHHHHHHHHcCCC------CCCCCC----CHHHHHHHHHHhccCHHHcCC
Confidence            97432111  11233344444433321      111112    234567778999999 99997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.44  E-value=2.9e-13  Score=105.31  Aligned_cols=142  Identities=16%  Similarity=0.246  Sum_probs=96.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           ...+..++|+||+++|+|.+++...    .+++.....++.++          
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~  120 (277)
T cd06642          45 EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE  120 (277)
T ss_pred             HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC
Confidence            3467999999999988           6677899999999999999998753    47788777777766          


Q ss_pred             --------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+                .........|+..|+|||.+.+..++.++          |++||..|
T Consensus       121 ~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p  200 (277)
T cd06642         121 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCC
Confidence                          000                00011123578899999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....+..       .......+.     .+.+.    ......+.+++.+||+.+ ++||+|.
T Consensus       201 ~~~~~~~~-------~~~~~~~~~-----~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06642         201 NSDLHPMR-------VLFLIPKNS-----PPTLE----GQYSKPFKEFVEACLNKDPRFRPTAK  248 (277)
T ss_pred             Ccccchhh-------HHhhhhcCC-----CCCCC----cccCHHHHHHHHHHccCCcccCcCHH
Confidence            86321110       011111111     11121    122345667888999999 9999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.44  E-value=2e-13  Score=106.91  Aligned_cols=147  Identities=14%  Similarity=0.280  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC----------CCCCCCHHHHHHHHHh
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN----------EEFPIAWEMQLHIVVD  104 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~----------~~~~l~~~~r~~i~~~  104 (208)
                      .....|.+|+.++.+++           ...+..++|+||+++|+|.+++.+..          ....++|.+...++.+
T Consensus        49 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  128 (288)
T cd05093          49 NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ  128 (288)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHH
Confidence            34567999999999987           66788999999999999999997532          1224889988888887


Q ss_pred             C------------------------C-------CC--Cc---------cccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S------------------------L-------AD--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i------------------------~-------~~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                        .       .+  ..         .......+++.|+|||.+.+..++.++     
T Consensus       129 l~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwsl  208 (288)
T cd05093         129 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL  208 (288)
T ss_pred             HHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHH
Confidence            7                        0       00  00         001123346789999999988888888     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                           |++| |..|+.....      .. +......+....     .....    ...+.++..+||+.+ .+|||+.
T Consensus       209 G~il~~l~t~g~~p~~~~~~------~~-~~~~i~~~~~~~-----~~~~~----~~~l~~li~~~l~~~p~~Rpt~~  270 (288)
T cd05093         209 GVVLWEIFTYGKQPWYQLSN------NE-VIECITQGRVLQ-----RPRTC----PKEVYDLMLGCWQREPHMRLNIK  270 (288)
T ss_pred             HHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcCCcCC-----CCCCC----CHHHHHHHHHHccCChhhCCCHH
Confidence                 9998 8888763321      11 122222332211     11112    235678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.44  E-value=1.5e-13  Score=111.71  Aligned_cols=39  Identities=21%  Similarity=0.399  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           48 VNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        48 ~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ...|.+|+.++..+ +           ...+..++||||+++|+|.++++.
T Consensus        82 ~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104          82 REALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHh
Confidence            45789999999988 3           567789999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.43  E-value=1.8e-13  Score=114.73  Aligned_cols=144  Identities=17%  Similarity=0.143  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.+|+.++..++           ...+..||||||+++|+|.++|++.. ....+++.....++.++          
T Consensus       109 ~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        109 AAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456788999999988           66789999999999999999986521 12257777776666665          


Q ss_pred             -----------------------CCCC---------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -----------------------LADQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -----------------------~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                             +-+.         ........||++|+|||++.+..++.++          |++||+
T Consensus       189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~  268 (478)
T PTZ00267        189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH  268 (478)
T ss_pred             CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence                                   0000         0012344589999999999988888887          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ....+.... .+....         .+......+.+++..||+.+ ++||++
T Consensus       269 ~Pf~~~~------~~~~~~~~~-~~~~~~---------~~~~~s~~~~~li~~~L~~dP~~Rps~  317 (478)
T PTZ00267        269 RPFKGPS------QREIMQQVL-YGKYDP---------FPCPVSSGMKALLDPLLSKNPALRPTT  317 (478)
T ss_pred             CCCCCCC------HHHHHHHHH-hCCCCC---------CCccCCHHHHHHHHHHhccChhhCcCH
Confidence            9987321      112222222 222110         11112235667888999999 999985

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.43  E-value=2.3e-13  Score=104.75  Aligned_cols=143  Identities=15%  Similarity=0.277  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|+.++.+++           ...+..++|+||+++|+|.+++.....  .++|.....++.++           
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~  120 (256)
T cd05059          43 EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNG  120 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            357899999999988           566778999999999999999986443  58888888887776           


Q ss_pred             -------------CCCC---------cc--------ccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LADQ---------TY--------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~~~---------~~--------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..+.         ..        ......++..|+|||...+..++.++          |++| |+.
T Consensus       121 i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~  200 (256)
T cd05059         121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM  200 (256)
T ss_pred             cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCC
Confidence                         0000         00        00111234579999999988888888          8888 788


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+.....   ...    ......+.     ....    +......+.+++.+||+.+ ++||||.
T Consensus       201 p~~~~~~---~~~----~~~~~~~~-----~~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~  249 (256)
T cd05059         201 PYERFSN---SEV----VESVSAGY-----RLYR----PKLAPTEVYTIMYSCWHEKPEDRPAFK  249 (256)
T ss_pred             CCCCCCH---HHH----HHHHHcCC-----cCCC----CCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            8863211   111    11111111     1111    1123345778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.43  E-value=1.3e-12  Score=102.23  Aligned_cols=145  Identities=17%  Similarity=0.154  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|++++.+++           ...+..++|+||+++|+|.+++...... .+++.....++.++            
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~i  123 (285)
T cd05632          45 SMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHRENT  123 (285)
T ss_pred             HHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45788999999988           5677899999999999999999764432 58999888888877            


Q ss_pred             ------------CC-------C--C------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ------------LA-------D--Q------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ------------~~-------~--~------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                  ..       +  .      ........|+..|+|||.+.+..++.++          |++||..||..
T Consensus       124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~  203 (285)
T cd05632         124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG  203 (285)
T ss_pred             eecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence                        00       0  0      0011235689999999999888888887          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...   ......+......+.      +.+.    ......+.+++..||+.+ .+||++
T Consensus       204 ~~~---~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05632         204 RKE---KVKREEVDRRVLETE------EVYS----AKFSEEAKSICKMLLTKDPKQRLGC  250 (285)
T ss_pred             CCH---HHHHHHHHHhhhccc------cccC----ccCCHHHHHHHHHHccCCHhHcCCC
Confidence            321   111111111111111      1111    112234567778999999 999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.43  E-value=2.2e-12  Score=101.14  Aligned_cols=144  Identities=21%  Similarity=0.266  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCC--eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           48 VNKLINEVVILSQIN-----------LETE--VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~--~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .+.+.+|+++|.+++           ....  .+++.|||+++|||.+++.+.+.  .++.........+|         
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs  135 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS  135 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            567899999999999           1222  68899999999999999998654  36666555544444         


Q ss_pred             ---------------CC----------------C----CccccccccCCcCccCccccccCCCC-cce----------eE
Q 048710          106 ---------------LA----------------D----QTYMTTQVQGTFGYLDLQYFQSSPFT-EKS----------NL  139 (208)
Q Consensus       106 ---------------~~----------------~----~~~~~~~~~gt~~y~aPE~~~~~~~~-~ks----------E~  139 (208)
                                     ..                .    .........||+.|||||++..+... .++          ||
T Consensus       136 ~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM  215 (313)
T KOG0198|consen  136 KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEM  215 (313)
T ss_pred             CCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEec
Confidence                           11                0    01112357899999999999853223 244          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||+.|+...     .....++......+..+     .++... .+.+.+++   ..|++.+ .+|||+
T Consensus       216 ~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P-----~ip~~l-s~~a~~Fl---~~C~~~~p~~Rpta  270 (313)
T KOG0198|consen  216 LTGKPPWSEF-----FEEAEALLLIGREDSLP-----EIPDSL-SDEAKDFL---RKCFKRDPEKRPTA  270 (313)
T ss_pred             cCCCCcchhh-----cchHHHHHHHhccCCCC-----CCCccc-CHHHHHHH---HHHhhcCcccCcCH
Confidence            9999998832     12233333333333222     222121 23444444   4999999 999985

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.43  E-value=3.7e-13  Score=103.27  Aligned_cols=147  Identities=22%  Similarity=0.337  Sum_probs=99.4

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ......|.+|++++++++           ...+..++|+||+++|+|.+++...... .+++....+++.++        
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh  118 (256)
T cd08220          40 KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNS-LLDEDTILHFFVQILLALHHVH  118 (256)
T ss_pred             cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999988           5678899999999999999999864332 57888888777766        


Q ss_pred             ----------------CCCCc----------------cccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ----------------LADQT----------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                      ..+..                .......|+..|+|||...+..++.++          |++||+
T Consensus       119 ~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~  198 (256)
T cd08220         119 TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLK  198 (256)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCC
Confidence                            00000                001124578899999999888777777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .|+....      ....+.... .+....     +    +......+.++..+||+.+ ++|||++
T Consensus       199 ~~~~~~~------~~~~~~~~~-~~~~~~-----~----~~~~~~~l~~li~~~l~~~p~~Rpt~~  248 (256)
T cd08220         199 RAFEAAN------LPALVLKIM-SGTFAP-----I----SDRYSPDLRQLILSMLNLDPSKRPQLS  248 (256)
T ss_pred             CCcccCc------hHHHHHHHH-hcCCCC-----C----CCCcCHHHHHHHHHHccCChhhCCCHH
Confidence            9987421      112222222 111111     1    1112335667888999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.43  E-value=6.9e-13  Score=103.27  Aligned_cols=143  Identities=17%  Similarity=0.250  Sum_probs=97.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           .+.+..++||||+++|+|.+++...    .+++.+...++.++         
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~  119 (277)
T cd06640          44 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHS  119 (277)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34568999999999887           5678899999999999999999753    46777666666554         


Q ss_pred             ---------------C-------CC---------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     .       .+         .........++..|+|||...+..++.++          |++||..
T Consensus       120 ~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~  199 (277)
T cd06640         120 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP  199 (277)
T ss_pred             CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCC
Confidence                           0       00         00011223578899999999888888888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....+..      ... ....+.         ....+......+.+++..||+.+ ++||+++
T Consensus       200 p~~~~~~~~------~~~-~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06640         200 PNSDMHPMR------VLF-LIPKNN---------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAK  248 (277)
T ss_pred             CCCCcChHh------Hhh-hhhcCC---------CCCCchhhhHHHHHHHHHHcccCcccCcCHH
Confidence            987432111      011 111111         11222344556778888999999 9999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.1e-12  Score=104.90  Aligned_cols=148  Identities=14%  Similarity=0.134  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..|+||||+++|+|.+++....   .+++.+...++.++           
T Consensus        45 ~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~  121 (333)
T cd05600          45 VRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG  121 (333)
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457899999999986           66788999999999999999997643   46777766666665           


Q ss_pred             -------------CCC-------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 -------------LAD-------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 -------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                   ..+             .........||+.|+|||++.+..++.++          |++||..||...
T Consensus       122 ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  201 (333)
T cd05600         122 YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS  201 (333)
T ss_pred             ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence                         000             00112345689999999999988888888          999999999743


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..      ..............  ..+.. ..........+.++...||+.+ ++||++
T Consensus       202 ~~------~~~~~~i~~~~~~~--~~~~~-~~~~~~~s~~~~~li~~~l~~~~~rr~s~  251 (333)
T cd05600         202 TP------NETWENLKYWKETL--QRPVY-DDPRFNLSDEAWDLITKLINDPSRRFGSL  251 (333)
T ss_pred             CH------HHHHHHHHhccccc--cCCCC-CccccccCHHHHHHHHHHhhChhhhcCCH
Confidence            21      11111111111000  00110 0000122345567777999988 999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.42  E-value=1.8e-12  Score=103.06  Aligned_cols=139  Identities=14%  Similarity=0.122  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+..|++++.+++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++            
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i  119 (318)
T cd05582          43 VRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLGI  119 (318)
T ss_pred             HHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            45788999999987           67788999999999999999997543   47888877777766            


Q ss_pred             ---------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 ---------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 ---------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                           +-+       .........||+.|+|||.+.+..++.++          |++||+.||.
T Consensus       120 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~  199 (318)
T cd05582         120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQ  199 (318)
T ss_pred             ecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCC
Confidence                                 000       00112245689999999999887777777          9999999987


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...      ....... ...+..      .+    +......+.++..+||+.+ ++||++
T Consensus       200 ~~~------~~~~~~~-i~~~~~------~~----p~~~~~~~~~li~~~l~~~P~~R~~a  243 (318)
T cd05582         200 GKD------RKETMTM-ILKAKL------GM----PQFLSPEAQSLLRALFKRNPANRLGA  243 (318)
T ss_pred             CCC------HHHHHHH-HHcCCC------CC----CCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence            431      1111111 111111      11    1112234557777999999 999985

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.42  E-value=3.3e-13  Score=105.01  Aligned_cols=145  Identities=12%  Similarity=0.238  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-----------CCCCCHHHHHHHHHh
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-----------EFPIAWEMQLHIVVD  104 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-----------~~~l~~~~r~~i~~~  104 (208)
                      ...+|.+|++++.+++           ...+..++||||+++|+|.++|+....           ...+++.+...++.+
T Consensus        51 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  130 (280)
T cd05049          51 ARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ  130 (280)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence            4568999999999988           566789999999999999999975421           124778888777777


Q ss_pred             C---------------------------------CCCCc---------cccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S---------------------------------LADQT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i---------------------------------~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                                 +.+..         .......+++.|+|||.+.+..++.++     
T Consensus       131 i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  210 (280)
T cd05049         131 IASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF  210 (280)
T ss_pred             HHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHH
Confidence            6                                 00000         001123346789999999988888888     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++| |..||.....      .. .......+....         .+......+.+++.+||+.+ ++||++
T Consensus       211 G~il~e~~~~g~~p~~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~  271 (280)
T cd05049         211 GVVLWEIFTYGKQPWYGLSN------EE-VIECITQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINI  271 (280)
T ss_pred             HHHHHHHHhcCCCCCCCCCH------HH-HHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence                 9998 9999863321      11 111222222211         11122345677888999999 999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.42  E-value=2.6e-13  Score=104.56  Aligned_cols=143  Identities=13%  Similarity=0.213  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+|.+|+.++.+++          ...+..++|+||+++|+|.+++...... .+++.+...++.++            
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~al~~LH~~~i  123 (260)
T cd05067          45 PEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGI-KLTINKLIDMAAQIAEGMAFIERKNY  123 (260)
T ss_pred             HHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            467999999999988          4456789999999999999999765433 68898888877777            


Q ss_pred             ------------CC-------C----------CccccccccCCcCccCccccccCCCCcce----------eEec-CCCC
Q 048710          106 ------------LA-------D----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKP  145 (208)
Q Consensus       106 ------------~~-------~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p  145 (208)
                                  ..       +          .........++..|+|||+..+..++.++          |++| |+.|
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p  203 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP  203 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCC
Confidence                        00       0          00011123356789999999888888777          8998 9999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      .+... ....+..     ...    +......+.+++.+||+.+ ++||++
T Consensus       204 ~~~~~~------~~~~~-~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         204 YPGMTN------PEVIQ-NLERGYR-----MPR----PDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             CCCCCh------HHHHH-HHHcCCC-----CCC----CCCCCHHHHHHHHHHccCChhhCCCH
Confidence            874321      11111 1212111     011    1112335677888999999 999996

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.42  E-value=2e-12  Score=103.10  Aligned_cols=139  Identities=10%  Similarity=0.125  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++||||+++|+|.+++....   .+++.+...++.++           
T Consensus        39 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~  115 (323)
T cd05571          39 VAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSCD  115 (323)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999887           67788999999999999999998643   57787776666665           


Q ss_pred             ----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-+       .........||+.|+|||++.+..++.++          |++||+.||
T Consensus       116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf  195 (323)
T cd05571         116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (323)
T ss_pred             eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCC
Confidence                                  000       01112245689999999999988888888          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .....       .........+..      .+..    .....+.++..+||+.+ ++||+
T Consensus       196 ~~~~~-------~~~~~~~~~~~~------~~p~----~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         196 YNQDH-------EKLFELILMEEI------RFPR----TLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             CCCCH-------HHHHHHHHcCCC------CCCC----CCCHHHHHHHHHHccCCHHHcCC
Confidence            73211       111111111111      1111    12234567777999999 99994

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.42  E-value=3.4e-13  Score=105.21  Aligned_cols=142  Identities=12%  Similarity=0.236  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+|..|+..+.+++          ...+..++++||+++|+|.++++....  .++|.....++.++            
T Consensus        53 ~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i  130 (279)
T cd05111          53 FQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEHRM  130 (279)
T ss_pred             HHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            457888888888876          445667899999999999999986543  58899888888877            


Q ss_pred             ------------C-------CC-----------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ------------L-------AD-----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ------------~-------~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                  .       .+           .........|+..|++||++.++.++.++          |++| |..
T Consensus       131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~  210 (279)
T cd05111         131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAE  210 (279)
T ss_pred             eccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence                        0       00           00011234467899999999888888888          8988 999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.....       ..+......+....  .+.       .....+..++.+||+.+ ++|||+
T Consensus       211 p~~~~~~-------~~~~~~~~~~~~~~--~~~-------~~~~~~~~li~~c~~~~p~~Rps~  258 (279)
T cd05111         211 PYAGMRP-------HEVPDLLEKGERLA--QPQ-------ICTIDVYMVMVKCWMIDENVRPTF  258 (279)
T ss_pred             CCCCCCH-------HHHHHHHHCCCcCC--CCC-------CCCHHHHHHHHHHcCCCcccCcCH
Confidence            9873311       11122222332111  111       12234567888999999 999997

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.42  E-value=3.3e-13  Score=104.26  Aligned_cols=144  Identities=14%  Similarity=0.185  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+|.+|++++.+++          ...+..++||||+++|+|.+++.+.... .++|.....++.++            
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (262)
T cd05071          45 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNY  123 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            357899999999987          4456689999999999999999864322 57888888888777            


Q ss_pred             ------------CC-------C--Cc--------cccccccCCcCccCccccccCCCCcce----------eEec-CCCC
Q 048710          106 ------------LA-------D--QT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKP  145 (208)
Q Consensus       106 ------------~~-------~--~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p  145 (208)
                                  ..       +  ..        .......++..|++||...+..++.++          |++| |..|
T Consensus       124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p  203 (262)
T cd05071         124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  203 (262)
T ss_pred             cccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                        00       0  00        001123356689999999888888888          9999 7878


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |.....       ..+......+..         ...+.+....+.+++.+||+.+ ++||+++
T Consensus       204 ~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~  251 (262)
T cd05071         204 YPGMVN-------REVLDQVERGYR---------MPCPPECPESLHDLMCQCWRKEPEERPTFE  251 (262)
T ss_pred             CCCCCh-------HHHHHHHhcCCC---------CCCccccCHHHHHHHHHHccCCcccCCCHH
Confidence            763211       111111111110         1112234456778999999999 9999863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=1.5e-12  Score=101.76  Aligned_cols=150  Identities=18%  Similarity=0.296  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++..++           ...+.+++|+||+++|+|.+++.+..   .+++.....++.++          
T Consensus        46 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~  122 (284)
T cd06620          46 VRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNV  122 (284)
T ss_pred             HHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            3568999999999887           56688999999999999999987643   46777766655544          


Q ss_pred             ---------------CC-------C--Cc-----cccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ---------------LA-------D--QT-----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------~~-------~--~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                     ..       +  ..     .......||..|+|||++.+..++.++          |++||..||
T Consensus       123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~  202 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF  202 (284)
T ss_pred             cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                           00       0  00     001234689999999999888788777          999999999


Q ss_pred             CCCCccCC-----ccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          147 CLTTYEEN-----KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       147 ~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ........     ..+..++...... .     .+.+.   ..+....+.+++.+||+.+ ++|||++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~  261 (284)
T cd06620         203 AFSNIDDDGQDDPMGILDLLQQIVQE-P-----PPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQ  261 (284)
T ss_pred             cccchhhhhhhhhhHHHHHHHHHhhc-c-----CCCCC---chhcCHHHHHHHHHHhcCCcccCcCHH
Confidence            74332110     0111222222211 1     11111   1123445778888999999 9999973

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.42  E-value=4.5e-13  Score=102.92  Aligned_cols=146  Identities=18%  Similarity=0.254  Sum_probs=99.5

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....++.+|+.++++++           ...+..++|+||+++|+|.+++...... .+++.+..+++.++         
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~  119 (256)
T cd08218          41 KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGV-LFPEDQILDWFVQICLALKHVHD  119 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34468999999999987           6778899999999999999999764332 47888888777777         


Q ss_pred             ---------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..+                .........|+..|+|||+..+..++.++          |++||+.
T Consensus       120 ~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~  199 (256)
T cd08218         120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKH  199 (256)
T ss_pred             CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCC
Confidence                           000                00001124578899999999888888777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....      ..+.+.... .+....         .+......+.+++.+||+.+ ++||+|+
T Consensus       200 ~~~~~~------~~~~~~~~~-~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (256)
T cd08218         200 AFEAGN------MKNLVLKII-RGSYPP---------VSSHYSYDLRNLVSQLFKRNPRDRPSVN  248 (256)
T ss_pred             CccCCC------HHHHHHHHh-cCCCCC---------CcccCCHHHHHHHHHHhhCChhhCcCHH
Confidence            987321      222222222 222111         11122335667888999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.41  E-value=4.9e-13  Score=104.40  Aligned_cols=146  Identities=10%  Similarity=0.249  Sum_probs=95.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--------------CCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--------------EFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--------------~~~l~~~~r~~i  101 (208)
                      ....|.+|+.++.+++           ...+..++||||+++|+|.+++.....              ...+++.+.+.+
T Consensus        50 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  129 (283)
T cd05090          50 QWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI  129 (283)
T ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHH
Confidence            3467999999999997           566789999999999999999963211              124778887777


Q ss_pred             HHhC------------------------CC-------C-----------CccccccccCCcCccCccccccCCCCcce--
Q 048710          102 VVDS------------------------LA-------D-----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS--  137 (208)
Q Consensus       102 ~~~i------------------------~~-------~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks--  137 (208)
                      +.++                        ..       +           .........++..|+|||+..+..++.++  
T Consensus       130 ~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  209 (283)
T cd05090         130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDI  209 (283)
T ss_pred             HHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhh
Confidence            7776                        00       0           00011223346689999999888888887  


Q ss_pred             --------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |++| |..|+.....       ..+......+....         .+......+.+++.+||+.+ .+||++
T Consensus       210 ~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~  273 (283)
T cd05090         210 WSFGVVLWEIFSFGLQPYYGFSN-------QEVIEMVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRF  273 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCH
Confidence                    8998 8888763211       11122222222111         11122345667888999999 999997


Q ss_pred             C
Q 048710          208 R  208 (208)
Q Consensus       208 ~  208 (208)
                      .
T Consensus       274 ~  274 (283)
T cd05090         274 K  274 (283)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.41  E-value=1.7e-12  Score=101.26  Aligned_cols=99  Identities=20%  Similarity=0.297  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHH-H---HHHHHhC-------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEM-Q---LHIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~-r---~~i~~~i-------  105 (208)
                      .....+|..+|.+++           .+.+.+|||+||+.||.|..+|.+++.   ++... |   ..|+..+       
T Consensus        69 ~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~g  145 (357)
T KOG0598|consen   69 VRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSKG  145 (357)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999998           899999999999999999999997653   44442 2   2333333       


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                                   .......+.+.+||+-|||||++.+..++..+          ||+||..||
T Consensus       146 IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF  225 (357)
T KOG0598|consen  146 IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPF  225 (357)
T ss_pred             eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence                                         11122233457999999999999999999888          999999999


Q ss_pred             CCC
Q 048710          147 CLT  149 (208)
Q Consensus       147 ~~~  149 (208)
                      ...
T Consensus       226 ~~~  228 (357)
T KOG0598|consen  226 YAE  228 (357)
T ss_pred             cCc
Confidence            843

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=1.3e-12  Score=104.30  Aligned_cols=152  Identities=16%  Similarity=0.183  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .....+|+..|+.++           .....+++||-||+.||+.+.+...-.. .++......|+.++           
T Consensus        68 ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G  146 (516)
T KOG0582|consen   68 LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNG  146 (516)
T ss_pred             HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcC
Confidence            678899999999998           7788999999999999999999864222 46777667777776           


Q ss_pred             -------------------------------CCCC--ccccccccCCcCccCccccc--cCCCCcce----------eEe
Q 048710          106 -------------------------------LADQ--TYMTTQVQGTFGYLDLQYFQ--SSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------------------------~~~~--~~~~~~~~gt~~y~aPE~~~--~~~~~~ks----------E~~  140 (208)
                                                     ..+.  .......+||+.|||||++.  ...|+.|+          |+.
T Consensus       147 ~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA  226 (516)
T KOG0582|consen  147 HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELA  226 (516)
T ss_pred             ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHh
Confidence                                           1111  11114568999999999954  37888888          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +|..||...++-      ..+...+ .+..+...-..+..+........+.++.-.|++.| ++|||-
T Consensus       227 ~G~aPf~k~pPm------kvLl~tL-qn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptA  287 (516)
T KOG0582|consen  227 HGHAPFSKYPPM------KVLLLTL-QNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTA  287 (516)
T ss_pred             cCCCCcccCChH------HHHHHHh-cCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCH
Confidence            999999966431      1122222 23332222111122222334456778888999999 999984

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.41  E-value=7.4e-13  Score=101.73  Aligned_cols=145  Identities=23%  Similarity=0.306  Sum_probs=98.2

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.+|++++.+++            ...+..++||||+++|+|.+++...... .+++.+...++.++         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~  120 (257)
T cd08223          42 ERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHE  120 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3457889999999987            2344688999999999999999864332 58888888888876         


Q ss_pred             ---------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..       +         .........|++.|+|||...+..++.++          |++||+.
T Consensus       121 ~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08223         121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH  200 (257)
T ss_pred             CCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCC
Confidence                           00       0         00111234578999999999888888877          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....      ........ ..+.+.         ..+......+.+++.+||+.+ ++||++.
T Consensus       201 ~~~~~~------~~~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  249 (257)
T cd08223         201 AFNAKD------MNSLVYRI-IEGKLP---------PMPKDYSPELGELIATMLSKRPEKRPSVK  249 (257)
T ss_pred             CCCCCC------HHHHHHHH-HhcCCC---------CCccccCHHHHHHHHHHhccCcccCCCHH
Confidence            987321      12222222 122221         111223345678888999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.41  E-value=3.6e-13  Score=103.76  Aligned_cols=142  Identities=15%  Similarity=0.220  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .++|.+..+++.++           
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05113          43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQ  120 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            357999999999998           556678999999999999999986433  58899888888877           


Q ss_pred             -------------CC-------C----------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LA-------D----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~-------~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..       +          .........++..|++||...+..++.++          |++| |..
T Consensus       121 i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~  200 (256)
T cd05113         121 FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKM  200 (256)
T ss_pred             eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCC
Confidence                         00       0          00001122345789999999888888888          8998 898


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.....      .. +......+...         ..+......+.+++.+||+.+ ++||++
T Consensus       201 p~~~~~~------~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~  248 (256)
T cd05113         201 PYERFNN------SE-TVEKVSQGLRL---------YRPHLASEKVYAIMYSCWHEKAEERPTF  248 (256)
T ss_pred             CcCcCCH------HH-HHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            9863321      11 11112222111         011112346678888999999 999996

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.41  E-value=4.9e-13  Score=102.54  Aligned_cols=145  Identities=13%  Similarity=0.211  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|++++.+++           ...+..++|+||+++|+|.+++.....  .++|.....++.++         
T Consensus        35 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~  112 (252)
T cd05084          35 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLES  112 (252)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567999999999988           566778999999999999999976433  47888887777766         


Q ss_pred             ---------------CC-------CC--cc-------cc--ccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 ---------------LA-------DQ--TY-------MT--TQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 ---------------~~-------~~--~~-------~~--~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                     ..       +.  ..       ..  ....++..|+|||.+.++.++.++          |+++ 
T Consensus       113 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~  192 (252)
T cd05084         113 KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSL  192 (252)
T ss_pred             CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhC
Confidence                           00       00  00       00  000123569999999888888888          8887 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |..|+.....       .........+.         ....+......+.+++.+||+.+ ++|||+.
T Consensus       193 ~~~p~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  244 (252)
T cd05084         193 GAVPYANLSN-------QQTREAIEQGV---------RLPCPELCPDAVYRLMERCWEYDPGQRPSFS  244 (252)
T ss_pred             CCCCccccCH-------HHHHHHHHcCC---------CCCCcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            8888763211       11111111111         11112222345677888999999 9999973

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.40  E-value=7e-13  Score=102.26  Aligned_cols=144  Identities=15%  Similarity=0.289  Sum_probs=95.1

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ....|.+|++++.+++          ...+..+++|||+++|+|.+++...... .++|.++..++.++           
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          44 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467999999999988          3337789999999999999999875433 57888888777776           


Q ss_pred             --------------------CCC----------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 --------------------LAD----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 --------------------~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                          ..+          .........++..|++||.+.+..++.++          |++| |+.
T Consensus       123 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~  202 (260)
T cd05073         123 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI  202 (260)
T ss_pred             ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCC
Confidence                                000          00001122346789999999888888777          8998 888


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....   ...+    ......+...         ..+......+.+++.+||+.+ ++||++
T Consensus       203 p~~~~~---~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         203 PYPGMS---NPEV----IRALERGYRM---------PRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             CCCCCC---HHHH----HHHHhCCCCC---------CCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            886321   1111    1112222111         111122345667888999999 999986

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.40  E-value=4.6e-13  Score=103.27  Aligned_cols=143  Identities=14%  Similarity=0.195  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      .+.|.+|+.++.+++          ...+..++||||+++|+|.+++++.... .++|..+..++.++            
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05069          45 PEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIERMNY  123 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            357899999999887          5556789999999999999999864332 58898888888777            


Q ss_pred             ------------CC-------C--Cc--------cccccccCCcCccCccccccCCCCcce----------eEec-CCCC
Q 048710          106 ------------LA-------D--QT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKP  145 (208)
Q Consensus       106 ------------~~-------~--~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p  145 (208)
                                  ..       +  ..        .......++..|+|||...+..++.++          |++| |..|
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p  203 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence                        00       0  00        000122356789999999888888777          9999 8888


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      ..... ....+..     +    ..+......+.+++.+||+.+ ++||++
T Consensus       204 ~~~~~~------~~~~~-~~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         204 YPGMVN------REVLE-QVERGYR-----M----PCPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             CCCCCH------HHHHH-HHHcCCC-----C----CCCcccCHHHHHHHHHHccCCcccCcCH
Confidence            863211      11111 1111110     0    111223345677888999999 999987

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.40  E-value=5.1e-13  Score=103.46  Aligned_cols=146  Identities=14%  Similarity=0.252  Sum_probs=96.4

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....+|..|+.++.+++           .+.+..++|+||+++|+|.+++.....  .+++.+...++.++        
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH  123 (269)
T cd05065          46 EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLS  123 (269)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999987           667778999999999999999986543  58898888887776        


Q ss_pred             ----------------CC-------CC--c---------cccc-ccc--CCcCccCccccccCCCCcce----------e
Q 048710          106 ----------------LA-------DQ--T---------YMTT-QVQ--GTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 ----------------~~-------~~--~---------~~~~-~~~--gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                      ..       +.  .         .... ...  .+..|+|||.+.+..++.++          |
T Consensus       124 ~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e  203 (269)
T cd05065         124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE  203 (269)
T ss_pred             HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHH
Confidence                            00       00  0         0000 011  13579999999988888877          8


Q ss_pred             Eec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          139 LLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       139 ~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +++ |..||....   ......++    ....     .    ...+.+.+..+.+++.+||+.+ ++||+|.
T Consensus       204 ~l~~g~~p~~~~~---~~~~~~~i----~~~~-----~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  259 (269)
T cd05065         204 VMSYGERPYWDMS---NQDVINAI----EQDY-----R----LPPPMDCPTALHQLMLDCWQKDRNARPKFG  259 (269)
T ss_pred             HhcCCCCCCCCCC---HHHHHHHH----HcCC-----c----CCCcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            776 999986432   11111111    1110     0    0111223345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.40  E-value=3.2e-13  Score=103.85  Aligned_cols=144  Identities=16%  Similarity=0.263  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.|.+|+.++.+++            ...+..++|+||+++|+|.+++++.... .++|.....++.++          
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~  121 (256)
T cd05082          43 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEAN  121 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            457999999999988            3456789999999999999999865432 58888888888777          


Q ss_pred             --------------CCCC---------c----cccccccCCcCccCccccccCCCCcce----------eEec-CCCCCC
Q 048710          106 --------------LADQ---------T----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPIC  147 (208)
Q Consensus       106 --------------~~~~---------~----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~  147 (208)
                                    ..+.         .    .......++..|+|||+..+..++.++          |++| |+.|+.
T Consensus       122 ~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~  201 (256)
T cd05082         122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  201 (256)
T ss_pred             CEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence                          0000         0    001122345689999999888888877          8887 888876


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ...      +..... ....+..     +.+    +......+.+++.+||+.+ ++|||++
T Consensus       202 ~~~------~~~~~~-~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~  247 (256)
T cd05082         202 RIP------LKDVVP-RVEKGYK-----MDA----PDGCPPVVYDVMKQCWHLDAATRPSFL  247 (256)
T ss_pred             CCC------HHHHHH-HHhcCCC-----CCC----CCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            321      111111 1111111     111    1122345667888999999 9999973

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.40  E-value=2.4e-12  Score=102.88  Aligned_cols=146  Identities=14%  Similarity=0.240  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++.++.            ...+..++||||+++|+|..++....   .+++.....++.++          
T Consensus        39 ~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~  115 (329)
T cd05618          39 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER  115 (329)
T ss_pred             HHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356778888887663            66788999999999999999987643   47777777666665          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       |         .........||..|+|||++.+..++.++          |++||+.|
T Consensus       116 ~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (329)
T cd05618         116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCC
Confidence                          00       0         01112245689999999999988888888          99999999


Q ss_pred             CCCCCccC--CccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEE--NKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |.......  ......++.........      .++.    .....+..++.+||+.+ ++||+
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~----~~~~~~~~ll~~~L~~dP~~R~~  249 (329)
T cd05618         196 FDIVGSSDNPDQNTEDYLFQVILEKQI------RIPR----SLSVKAASVLKSFLNKDPKERLG  249 (329)
T ss_pred             CccCCCcCCcccccHHHHHHHHhcCCC------CCCC----CCCHHHHHHHHHHhcCCHHHcCC
Confidence            96321111  11233344433333221      1111    12234567778999999 99997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.40  E-value=8.1e-13  Score=101.52  Aligned_cols=144  Identities=19%  Similarity=0.249  Sum_probs=96.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           ...+..++|+||+++|+|.+++...... .++......++.++          
T Consensus        41 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~  119 (255)
T cd08219          41 AVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHEK  119 (255)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhhC
Confidence            3467889999999887           6778899999999999999999754332 46777777766666          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       +         .........|+..|+|||+..+..++.++          |+++|..|
T Consensus       120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence                          00       0         00011234578899999999888787777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ...... ....+....     +..    .....+.+++.+||+.+ ++||++
T Consensus       200 ~~~~~------~~~~~~-~~~~~~~~~-----~~~----~~~~~~~~li~~~l~~~P~~Rp~~  246 (255)
T cd08219         200 FQANS------WKNLIL-KVCQGSYKP-----LPS----HYSYELRSLIKQMFKRNPRSRPSA  246 (255)
T ss_pred             CCCCC------HHHHHH-HHhcCCCCC-----CCc----ccCHHHHHHHHHHHhCCcccCCCH
Confidence            87421      111111 122222211     111    12234567778999999 999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.40  E-value=4.8e-13  Score=102.96  Aligned_cols=142  Identities=15%  Similarity=0.283  Sum_probs=96.1

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+|.+|++++.+++          ...+..++||||+++|+|.++|.+..   .++|..+..++.++           
T Consensus        39 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~  115 (257)
T cd05060          39 GKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH  115 (257)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            3467999999999987          55567899999999999999998654   58888888888887           


Q ss_pred             -------------CC-----------------CCccc--cccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 -------------LA-----------------DQTYM--TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 -------------~~-----------------~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                   ..                 .....  .....++..|+|||...+..++.++          |++| |
T Consensus       116 i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g  195 (257)
T cd05060         116 FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG  195 (257)
T ss_pred             eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCC
Confidence                         00                 00000  0112234679999999888888888          8998 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||....   ...+..    ....+...         ..+......+.+++.+||+.+ ++||++
T Consensus       196 ~~p~~~~~---~~~~~~----~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~  245 (257)
T cd05060         196 AKPYGEMK---GAEVIA----MLESGERL---------PRPEECPQEIYSIMLSCWKYRPEDRPTF  245 (257)
T ss_pred             CCCcccCC---HHHHHH----HHHcCCcC---------CCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            99987432   111222    22222110         111122345678888999999 999986

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.40  E-value=6.8e-13  Score=104.76  Aligned_cols=145  Identities=16%  Similarity=0.269  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...|.+|+.++.++ +           ...+..++|+||+++|+|.++++..... .+++.+...++.++          
T Consensus        82 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~  160 (302)
T cd05055          82 REALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLASK  160 (302)
T ss_pred             HHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45799999999999 4           5667799999999999999999864432 48899888887776          


Q ss_pred             --------------C-------CC--Cc---------cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------L-------AD--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------~-------~~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                    .       .+  .+         .......++..|+|||.+.+..++.++          |++| |
T Consensus       161 ~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g  240 (302)
T cd05055         161 NCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG  240 (302)
T ss_pred             CeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCC
Confidence                          0       00  00         001122346789999999888888888          8888 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..|+.....      ..........+..         ...+......+.+++.+||+.+ ++||++.
T Consensus       241 ~~p~~~~~~------~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  292 (302)
T cd05055         241 SNPYPGMPV------DSKFYKLIKEGYR---------MAQPEHAPAEIYDIMKTCWDADPLKRPTFK  292 (302)
T ss_pred             CCCcCCCCc------hHHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence            999864321      1111112222211         0111112235677888999999 9999973

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.40  E-value=6.6e-13  Score=102.81  Aligned_cols=145  Identities=13%  Similarity=0.241  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .+++.+...++.++         
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~  124 (267)
T cd05066          47 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD  124 (267)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34568999999999887           567789999999999999999986543  57888888887766         


Q ss_pred             ---------------CC-------C----------Ccccc--ccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ---------------LA-------D----------QTYMT--TQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------~~-------~----------~~~~~--~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                     ..       +          .....  ....++..|++||.+.+..++.++          |+++
T Consensus       125 ~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~  204 (267)
T cd05066         125 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS  204 (267)
T ss_pred             CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhc
Confidence                           00       0          00000  111224679999999988888888          8776


Q ss_pred             -CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 -KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 -g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                       |..||.....   ..+.    ....++..     +    +.+...+..+.+++.+||+.+ ++||+|.
T Consensus       205 ~g~~p~~~~~~---~~~~----~~~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  257 (267)
T cd05066         205 YGERPYWEMSN---QDVI----KAIEEGYR-----L----PAPMDCPAALHQLMLDCWQKDRNERPKFE  257 (267)
T ss_pred             CCCCCcccCCH---HHHH----HHHhCCCc-----C----CCCCCCCHHHHHHHHHHcccCchhCCCHH
Confidence             9999874321   1111    11212110     0    111122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.40  E-value=8.6e-13  Score=101.35  Aligned_cols=146  Identities=25%  Similarity=0.318  Sum_probs=100.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....+|.+|+.++++++           .+.+..++||||+++|+|.+++...... .+++.+...++.++        
T Consensus        40 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh  118 (256)
T cd08221          40 EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQ-LFEEEMVLWYLFQIVSAVSYIH  118 (256)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            445568999999999988           6778899999999999999999865332 57888888777765        


Q ss_pred             -------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                               +       ...........|+..|+|||...+..++.++          |+++|.
T Consensus       119 ~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~  198 (256)
T cd08221         119 KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLK  198 (256)
T ss_pred             hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCC
Confidence                                     0       0000012235689999999999887777777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....      ..+.+.... .+.....         +......+.+++.+||+.+ ++||++
T Consensus       199 ~~~~~~~------~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~i~~~l~~~p~~R~s~  247 (256)
T cd08221         199 RTFDATN------PLNLVVKIV-QGNYTPV---------VSVYSSELISLVHSLLQQDPEKRPTA  247 (256)
T ss_pred             CCCCCCC------HHHHHHHHH-cCCCCCC---------ccccCHHHHHHHHHHcccCcccCCCH
Confidence            9986321      122222222 2322111         1122335667778999999 999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.40  E-value=2.4e-12  Score=99.49  Aligned_cols=150  Identities=17%  Similarity=0.219  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....|.+|++++..++           ...+..++|+||+++|+|.+++.... +...++......++.++        
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH  123 (267)
T cd08228          44 KARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH  123 (267)
T ss_pred             HHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence            34567999999999987           55678999999999999999986422 11246777777777766        


Q ss_pred             ----------------CC-------CC---------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ----------------LA-------DQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------~~-------~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                      ..       +.         ........|+..|+|||...+..++.++          |++||+
T Consensus       124 ~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~  203 (267)
T cd08228         124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence                            00       00         0011234578899999999888787777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .|+...    ......+.. .......     +.+   ........+.+++.+||+.+ ++||++.
T Consensus       204 ~p~~~~----~~~~~~~~~-~~~~~~~-----~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~  256 (267)
T cd08228         204 SPFYGD----KMNLFSLCQ-KIEQCDY-----PPL---PTEHYSEKLRELVSMCIYPDPDQRPDIG  256 (267)
T ss_pred             CCCccc----cccHHHHHH-HHhcCCC-----CCC---ChhhcCHHHHHHHHHHCCCCcccCcCHH
Confidence            998632    112222222 2212111     111   11123355778888999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=1.8e-13  Score=114.53  Aligned_cols=145  Identities=14%  Similarity=0.201  Sum_probs=104.5

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+|++|+.+|-+|+          .-.....+|+|.++.|||.+.|++.... .|-.......+.+|           
T Consensus       154 ~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~-~llv~~Lcdya~QiA~aM~YLeskr  232 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKA-ILLVSRLCDYAMQIAKAMQYLESKR  232 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccchHHHHHhhcccc-ceeHHHHHHHHHHHHHHHHHHhhhh
Confidence            5679999999999998          2236677999999999999999983332 56555555555555           


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                      ..+-+.......-.+.|.|||.+.++.|+.+|          ||+| |
T Consensus       233 lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyG  312 (1039)
T KOG0199|consen  233 LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYG  312 (1039)
T ss_pred             hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccC
Confidence                                            11111112233347899999999999999999          9999 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +.|+-..++       ..+.+         .+|..-+...+..|.+++++++..||... .+||+++
T Consensus       313 EePW~G~~g-------~qIL~---------~iD~~erLpRPk~csedIY~imk~cWah~paDRptFs  363 (1039)
T KOG0199|consen  313 EEPWVGCRG-------IQILK---------NIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFS  363 (1039)
T ss_pred             CCCCCCCCH-------HHHHH---------hccccccCCCCCCChHHHHHHHHHhccCCccccccHH
Confidence            999874421       11222         23333334556788899999999999999 9999974

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.39  E-value=6.9e-13  Score=101.53  Aligned_cols=143  Identities=14%  Similarity=0.207  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++.+++           ...+..++||||+++|+|.+++.....  .++|.....++.++           
T Consensus        36 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~  113 (250)
T cd05085          36 KIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLESKN  113 (250)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457999999999887           566778999999999999999976443  47899888888876           


Q ss_pred             -------------CC-------CC--cc--------ccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LA-------DQ--TY--------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~-------~~--~~--------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..       +.  ..        ......+++.|+|||+..+..++.++          |++| |..
T Consensus       114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~  193 (250)
T cd05085         114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVC  193 (250)
T ss_pred             eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCC
Confidence                         00       00  00        00011235679999999888888877          8888 888


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||....      .. ........+...         ..+......+.+++.+||+.+ ++||+|.
T Consensus       194 p~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  242 (250)
T cd05085         194 PYPGMT------NQ-QAREQVEKGYRM---------SCPQKCPDDVYKVMQRCWDYKPENRPKFS  242 (250)
T ss_pred             CCCCCC------HH-HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence            986331      11 111122222111         111123346778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.39  E-value=3.8e-13  Score=109.40  Aligned_cols=39  Identities=21%  Similarity=0.455  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           48 VNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        48 ~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ...+.+|+.++..+ +           ...+..++||||+++|+|.++++.
T Consensus        85 ~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106          85 REALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             HHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHh
Confidence            45789999999988 3           566789999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.39  E-value=1.9e-12  Score=101.42  Aligned_cols=145  Identities=17%  Similarity=0.157  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++.+++           ...+..++|+||+++|+|.+++...... .+++.....++.++            
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05630          45 SMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEA-GFEEGRAVFYAAEICCGLEDLHQERI  123 (285)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            45788999999987           5667899999999999999999754332 57888887777766            


Q ss_pred             ------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                  ..       +        .........||..|+|||.+.+..++.++          |+++|+.||..
T Consensus       124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~  203 (285)
T cd05630         124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ  203 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence                        00       0        00111234689999999999988888887          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....   ...........  .    .......    ....+.++...||+.+ ++|||.
T Consensus       204 ~~~~~---~~~~~~~~~~~--~----~~~~~~~----~~~~~~~li~~~l~~~p~~R~s~  250 (285)
T cd05630         204 RKKKI---KREEVERLVKE--V----QEEYSEK----FSPDARSLCKMLLCKDPKERLGC  250 (285)
T ss_pred             CCccc---hHHHHHhhhhh--h----hhhcCcc----CCHHHHHHHHHHhhcCHHHccCC
Confidence            32110   11111111110  0    0111111    2234567778999999 999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.39  E-value=3.1e-12  Score=102.20  Aligned_cols=140  Identities=11%  Similarity=0.126  Sum_probs=95.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++.+++           ...+..++||||+++|+|.+++....   .+++.+...++.++          
T Consensus        38 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~  114 (328)
T cd05593          38 EVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG  114 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467889999999887           67788999999999999999997643   57888777777666          


Q ss_pred             -----------------------CC-------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------LA-------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +-       ..........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       115 ~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~P  194 (328)
T cd05593         115 KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  194 (328)
T ss_pred             CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCC
Confidence                                   00       001112245689999999999888888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |....      ...... ....+.      ..+...    ....+.++...|++.+ ++||+
T Consensus       195 f~~~~------~~~~~~-~~~~~~------~~~p~~----~~~~~~~li~~~L~~dP~~R~~  239 (328)
T cd05593         195 FYNQD------HEKLFE-LILMED------IKFPRT----LSADAKSLLSGLLIKDPNKRLG  239 (328)
T ss_pred             CCCCC------HHHHHH-HhccCC------ccCCCC----CCHHHHHHHHHHcCCCHHHcCC
Confidence            87321      111111 111111      111111    2234556777999999 99984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.39  E-value=3e-12  Score=102.08  Aligned_cols=140  Identities=11%  Similarity=0.135  Sum_probs=94.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|++++.+++           ...+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        38 ~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  114 (323)
T cd05595          38 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR  114 (323)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456788999999887           66778999999999999999997653   47788777776666          


Q ss_pred             --------------CC----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..                ..........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       115 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~P  194 (323)
T cd05595         115 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  194 (323)
T ss_pred             CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCC
Confidence                          00                001111235689999999999988888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |.....      ........ ....      .+....    ...+.++...||+.+ ++||+
T Consensus       195 f~~~~~------~~~~~~~~-~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         195 FYNQDH------ERLFELIL-MEEI------RFPRTL----SPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             CCCCCH------HHHHHHHh-cCCC------CCCCCC----CHHHHHHHHHHccCCHHHhCC
Confidence            874321      11111111 1111      111122    234557777999999 99983

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1.5e-12  Score=102.17  Aligned_cols=139  Identities=16%  Similarity=0.213  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.+.+|+.++.+++           .+.+..++||||+++|+|.+++.+..   .+++.....++.++           
T Consensus        45 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  121 (291)
T cd05612          45 EQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE  121 (291)
T ss_pred             HHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456889999999988           66788999999999999999998654   47777777666666           


Q ss_pred             -------------CCC---------C----ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 -------------LAD---------Q----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 -------------~~~---------~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                   ..+         .    ........||+.|+|||.+.+..++.++          |++||+.||...
T Consensus       122 i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  201 (291)
T cd05612         122 IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD  201 (291)
T ss_pred             eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                         000         0    0011234589999999999988888887          999999998742


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .      ... +......+..      .+....    ...+.++...||+.+ .+||+
T Consensus       202 ~------~~~-~~~~i~~~~~------~~~~~~----~~~~~~li~~~l~~dp~~R~~  242 (291)
T cd05612         202 N------PFG-IYEKILAGKL------EFPRHL----DLYAKDLIKKLLVVDRTRRLG  242 (291)
T ss_pred             C------HHH-HHHHHHhCCc------CCCccC----CHHHHHHHHHHcCCCHHHccC
Confidence            1      111 1122222211      111111    224567777999999 99995

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.39  E-value=2e-12  Score=104.37  Aligned_cols=148  Identities=22%  Similarity=0.247  Sum_probs=104.2

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCe-EEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEV-LLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~-~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .++...+...+|+.++++++           .+++. .+|||+||+||+|.+.|...++. .++..+.+++..++     
T Consensus        42 ~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~-~f~E~~i~~~~~Q~~~av~  120 (426)
T KOG0589|consen   42 LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGV-LFPEERILKWFVQILLAVN  120 (426)
T ss_pred             cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhc-cccHHHHHHHHHHHHHHHH
Confidence            34444567899999999988           56666 99999999999999999876633 56666666666666     


Q ss_pred             ----------------------------------CCCC-ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------------------------LADQ-TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------------------------~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                        ..+. .....++.||+-||.||.+++.+|+.|+          |++
T Consensus       121 ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~  200 (426)
T KOG0589|consen  121 YLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMC  200 (426)
T ss_pred             HHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHH
Confidence                                              1111 1245678999999999999999999999          899


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +-+.+|...   +...|+   .+.. .+.    ++     ..+......+..++..|++.+ ..||+.
T Consensus       201 ~lk~aF~a~---~m~~Li---~ki~-~~~----~~-----Plp~~ys~el~~lv~~~l~~~P~~RPsa  252 (426)
T KOG0589|consen  201 TLKPAFKAS---NMSELI---LKIN-RGL----YS-----PLPSMYSSELRSLVKSMLRKNPEHRPSA  252 (426)
T ss_pred             hcccccCcc---chHHHH---HHHh-hcc----CC-----CCCccccHHHHHHHHHHhhcCCccCCCH
Confidence            989888743   222232   2222 111    11     122223345667777999999 999984

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.38  E-value=6.4e-13  Score=103.44  Aligned_cols=146  Identities=14%  Similarity=0.212  Sum_probs=96.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC----CCCCCHHHHHHHHHhC------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE----EFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~----~~~l~~~~r~~i~~~i------  105 (208)
                      ...+|.+|+.++.+++           .+.+..++|+||+++|+|.+++.....    ...++|....+++.++      
T Consensus        52 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  131 (277)
T cd05036          52 DESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY  131 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            3467999999999988           566778999999999999999976431    1258899888888777      


Q ss_pred             ------------------CCCC---cc------c------------cccccCCcCccCccccccCCCCcce---------
Q 048710          106 ------------------LADQ---TY------M------------TTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 ------------------~~~~---~~------~------------~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                        ....   ..      .            ......+..|+|||++.+..++.++         
T Consensus       132 LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il  211 (277)
T cd05036         132 LEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL  211 (277)
T ss_pred             HHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH
Confidence                              0000   00      0            0011124579999999988899888         


Q ss_pred             -eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                       |++| |..||.....      .... .....+..         ...+......+.+++.+||+.+ ++||++.
T Consensus       212 ~el~~~g~~pf~~~~~------~~~~-~~~~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~  269 (277)
T cd05036         212 WEIFSLGYMPYPGRTN------QEVM-EFVTGGGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFA  269 (277)
T ss_pred             HHHHcCCCCCCCCCCH------HHHH-HHHHcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence             8886 9999874321      1111 11111110         1111222345677888999999 9999973

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.38  E-value=1.6e-12  Score=99.76  Aligned_cols=145  Identities=17%  Similarity=0.231  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|++++.+++           ...+..|+++||+++++|.+++.....  .++|.....++.++           
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~  119 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSNK  119 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            568999999999988           566889999999999999999976443  58888888888876           


Q ss_pred             -------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                   ..+                .........|+..|++||++.+..++.++          |++||+.|+
T Consensus       120 i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~  199 (256)
T cd06612         120 KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPY  199 (256)
T ss_pred             cccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                         000                00011234478899999999888888888          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ........      ... ....     ..+.+  ..+......+.+++.+||+.+ ++|||++
T Consensus       200 ~~~~~~~~------~~~-~~~~-----~~~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~  248 (256)
T cd06612         200 SDIHPMRA------IFM-IPNK-----PPPTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAI  248 (256)
T ss_pred             CCcchhhh------hhh-hccC-----CCCCC--CchhhcCHHHHHHHHHHHhcChhhCcCHH
Confidence            74321110      000 0000     00111  111222345677888999999 9999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.38  E-value=6.6e-13  Score=103.35  Aligned_cols=144  Identities=17%  Similarity=0.284  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------CCCCCHHHHHHHHHhC----
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------EFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------~~~l~~~~r~~i~~~i----  105 (208)
                      ..+|.+|+.++.+++           ...+..++|+||+++|+|.+++++...       ...++|.+...++.++    
T Consensus        53 ~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (277)
T cd05062          53 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence            457899999999887           566789999999999999999975321       1246788877776666    


Q ss_pred             --------------------CC-------C--Cc---------cccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------LA-------D--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------~~-------~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                          ..       +  ..         .......++..|+|||.+.++.++.++          
T Consensus       133 ~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  212 (277)
T cd05062         133 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  212 (277)
T ss_pred             HHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHH
Confidence                                00       0  00         000112346789999999888888888          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++| |..|+....      ... ......++....         .+......+.+++.+||+.+ ++|||+
T Consensus       213 el~~~~~~p~~~~~------~~~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~  268 (277)
T cd05062         213 EIATLAEQPYQGMS------NEQ-VLRFVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSF  268 (277)
T ss_pred             HHHcCCCCCCCCCC------HHH-HHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            8998 688876321      111 112222222211         11122345678888999999 999997

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.38  E-value=2.3e-12  Score=102.69  Aligned_cols=141  Identities=16%  Similarity=0.172  Sum_probs=95.2

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..+.+..|.+++..++            .+.+..|+||||+++|+|.+++....   .+++.....++.++         
T Consensus        43 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~  119 (324)
T cd05587          43 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHS  119 (324)
T ss_pred             HHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3456888888888775            56778999999999999999997643   47788777777766         


Q ss_pred             ---------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..       |         .........||..|+|||++.+..++.++          |++||+.
T Consensus       120 ~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~  199 (324)
T cd05587         120 KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP  199 (324)
T ss_pred             CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCC
Confidence                           00       0         01112235689999999999988888887          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||.....      .. ..........      .+....    ...+.++..+||+.+ .+||+.
T Consensus       200 pf~~~~~------~~-~~~~i~~~~~------~~~~~~----~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         200 PFDGEDE------DE-LFQSIMEHNV------SYPKSL----SKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCCH------HH-HHHHHHcCCC------CCCCCC----CHHHHHHHHHHhhcCHHHcCCC
Confidence            9974311      11 1111212111      111112    234567777999999 999974

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.38  E-value=5.3e-12  Score=97.55  Aligned_cols=149  Identities=19%  Similarity=0.230  Sum_probs=97.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+|.+|+.++..++           .+.+..+++|||+++|+|.+++.... ....++|.+...++.++         
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08229          45 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999987           56778999999999999999987421 12257888887777766         


Q ss_pred             ---------------CCCC----------------ccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..+.                ........|+..|+|||+..+..++.++          |+++|..
T Consensus       125 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~  204 (267)
T cd08229         125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS  204 (267)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCC
Confidence                           0000                0011234678899999999888888777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....    ........ ......     .+.+..   ......+.+++.+||+.+ ++||||.
T Consensus       205 p~~~~~----~~~~~~~~-~~~~~~-----~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~  256 (267)
T cd08229         205 PFYGDK----MNLYSLCK-KIEQCD-----YPPLPS---DHYSEELRQLVNMCINPDPEKRPDIT  256 (267)
T ss_pred             Cccccc----chHHHHhh-hhhcCC-----CCCCCc---ccccHHHHHHHHHhcCCCcccCCCHH
Confidence            986321    11111111 111111     111111   123345667777999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.38  E-value=3.4e-13  Score=107.91  Aligned_cols=121  Identities=19%  Similarity=0.263  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCC
Q 048710           11 LVTKVLLLCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGT   79 (208)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~Gs   79 (208)
                      -..+-+|+++++.++|.++++.+               .--++|-.+|.+++           .+.+.++||+..|.||+
T Consensus       207 raTGKMYAcKkL~KKRiKkr~ge---------------~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGD  271 (591)
T KOG0986|consen  207 RATGKMYACKKLDKKRIKKRKGE---------------TMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGD  271 (591)
T ss_pred             ecchhhHHHHHHHHHHHHHhhhh---------------HHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCc
Confidence            45567888888888776665444               34678899999988           88999999999999999


Q ss_pred             hhhHhhcCCCCCCCCHHHHH----HHHHhC-----------------------------CCC------CccccccccCCc
Q 048710           80 VYQYINNQNEEFPIAWEMQL----HIVVDS-----------------------------LAD------QTYMTTQVQGTF  120 (208)
Q Consensus        80 L~~~l~~~~~~~~l~~~~r~----~i~~~i-----------------------------~~~------~~~~~~~~~gt~  120 (208)
                      |.=+|++.+++ .++.....    .|+.|+                             +.+      ........+||.
T Consensus       272 LkfHiyn~g~~-gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~  350 (591)
T KOG0986|consen  272 LKFHIYNHGNP-GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTV  350 (591)
T ss_pred             eeEEeeccCCC-CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcc
Confidence            99999998764 67776554    455554                             111      111123448999


Q ss_pred             CccCccccccCCCCcce----------eEecCCCCCC
Q 048710          121 GYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       121 ~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                      ||||||+++.+.|+...          ||+.|+.||.
T Consensus       351 GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr  387 (591)
T KOG0986|consen  351 GYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR  387 (591)
T ss_pred             cccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence            99999999998888776          9999999987

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=1.2e-12  Score=101.72  Aligned_cols=143  Identities=15%  Similarity=0.229  Sum_probs=97.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++++++           .+....++|+||+++|+|.+++...    .+++.....++.++          
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~  117 (274)
T cd06609          42 EIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE  117 (274)
T ss_pred             HHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467899999999988           5668899999999999999999864    47888887777766          


Q ss_pred             --------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+                .........|+..|++||...+..++.++          |++||..|
T Consensus       118 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p  197 (274)
T cd06609         118 GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP  197 (274)
T ss_pred             CcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                          000                00112234578889999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....+      .. .......+..     +.+...   .....+.++..+||+.+ ++||+++
T Consensus       198 ~~~~~~------~~-~~~~~~~~~~-----~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~  246 (274)
T cd06609         198 LSDLHP------MR-VLFLIPKNNP-----PSLEGN---KFSKPFKDFVSLCLNKDPKERPSAK  246 (274)
T ss_pred             cccCch------HH-HHHHhhhcCC-----CCCccc---ccCHHHHHHHHHHhhCChhhCcCHH
Confidence            874321      11 1111112211     111111   02335667888999999 9999963

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.38  E-value=2.4e-12  Score=102.93  Aligned_cols=139  Identities=16%  Similarity=0.136  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.+.+|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++           
T Consensus        62 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~  138 (329)
T PTZ00263         62 VQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD  138 (329)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457899999999988           67788999999999999999998654   46666655555544           


Q ss_pred             -------------CCC---------C----ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 -------------LAD---------Q----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 -------------~~~---------~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                   ..+         .    ........||+.|+|||.+.+..++.++          |++||..||...
T Consensus       139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  218 (329)
T PTZ00263        139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD  218 (329)
T ss_pred             eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence                         000         0    0011235689999999999988888887          999999998732


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .      .. ........+.+      .+....    ...+.++...||+.| .+||+
T Consensus       219 ~------~~-~~~~~i~~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~~  259 (329)
T PTZ00263        219 T------PF-RIYEKILAGRL------KFPNWF----DGRARDLVKGLLQTDHTKRLG  259 (329)
T ss_pred             C------HH-HHHHHHhcCCc------CCCCCC----CHHHHHHHHHHhhcCHHHcCC
Confidence            1      11 11222222221      011111    123457778999999 99996

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.38  E-value=2.7e-12  Score=100.88  Aligned_cols=155  Identities=17%  Similarity=0.271  Sum_probs=97.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC---------CCCCCHHHHHHHHHh
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE---------EFPIAWEMQLHIVVD  104 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~---------~~~l~~~~r~~i~~~  104 (208)
                      ......|.+|++++.+++           ...+..++||||+++|+|.+++.....         ...++|...+.++.+
T Consensus        58 ~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  137 (295)
T cd05097          58 KTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQ  137 (295)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHH
Confidence            344567999999999998           567789999999999999999965321         114678888887777


Q ss_pred             C------------------------CC-------C--Cc---------cccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S------------------------LA-------D--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i------------------------~~-------~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                        ..       +  ..         .......++..|+|||...++.++.++     
T Consensus       138 i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl  217 (295)
T cd05097         138 IASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAF  217 (295)
T ss_pred             HHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHH
Confidence            7                        00       0  00         001122346789999999888888888     


Q ss_pred             -----eEec--CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -----NLLT--KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -----E~~t--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                           |++|  +..||.....   ......+.........      .+....+...+..+.+++.+||+.+ ++||||+
T Consensus       218 G~~l~el~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~  287 (295)
T cd05097         218 GVTLWEMFTLCKEQPYSLLSD---EQVIENTGEFFRNQGR------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN  287 (295)
T ss_pred             HHHHHHHHHcCCCCCCcccCh---HHHHHHHHHhhhhccc------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence                 8877  5667653211   1121112211111100      0000111122346778888999999 9999984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.38  E-value=2.1e-12  Score=102.86  Aligned_cols=140  Identities=16%  Similarity=0.158  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++..+.            ...+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        39 ~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~  115 (320)
T cd05590          39 VECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK  115 (320)
T ss_pred             HHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456788888887653            57788999999999999999997653   47777777776666          


Q ss_pred             --------------CC---------C-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA---------D-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~---------~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..         +       .........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       116 ~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (320)
T cd05590         116 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAP  195 (320)
T ss_pred             CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCC
Confidence                          00         0       01112345689999999999988888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ... +......+..      .+    +......+.++...|++.+ .+||+.
T Consensus       196 f~~~~------~~~-~~~~i~~~~~------~~----~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         196 FEAEN------EDD-LFEAILNDEV------VY----PTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCCC------HHH-HHHHHhcCCC------CC----CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            97432      111 1122222211      01    1111234567777999999 999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.38  E-value=9.6e-13  Score=101.83  Aligned_cols=146  Identities=16%  Similarity=0.273  Sum_probs=96.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC----CCCCCCHHHHHHHHHhC------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN----EEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~----~~~~l~~~~r~~i~~~i------  105 (208)
                      ....|.+|+.++..++           ...+..++|+||+++|+|.+++++..    ....++|.+.+.++.++      
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (269)
T cd05044          42 EKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY  121 (269)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence            3457899999999987           55677999999999999999997532    11247888888888776      


Q ss_pred             ------------------CCCC-----ccc------------------cccccCCcCccCccccccCCCCcce-------
Q 048710          106 ------------------LADQ-----TYM------------------TTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 ------------------~~~~-----~~~------------------~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                        ..+.     ...                  .....++..|+|||++.++.++.++       
T Consensus       122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  201 (269)
T cd05044         122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGV  201 (269)
T ss_pred             HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHH
Confidence                              0000     000                  0011235789999999988888888       


Q ss_pred             ---eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ---NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ---E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                         |++| |+.||....   .   .. .......+...         ..+...+..+.+++.+||+.+ ++||+++
T Consensus       202 il~ellt~g~~p~~~~~---~---~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  261 (269)
T cd05044         202 LMWEILTLGQQPYPALN---N---QE-VLQHVTAGGRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFD  261 (269)
T ss_pred             HHHHHHHcCCCCCcccC---H---HH-HHHHHhcCCcc---------CCcccchHHHHHHHHHHcCCCcccCCCHH
Confidence               8898 999986321   1   11 11111111110         111223345678888999999 9999973

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.38  E-value=5.3e-12  Score=98.41  Aligned_cols=146  Identities=18%  Similarity=0.187  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+..|++++.+++           .+.+..++||||+++|+|.+++...... .++|.....++.++            
T Consensus        38 ~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i  116 (277)
T cd05607          38 KMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGER-GLEMERVIHYSAQITCGILHLHSMDI  116 (277)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            34567999999988           6677899999999999999998764432 58888887776666            


Q ss_pred             ------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                  ..       +        .........||..|+|||++.+..++.++          |++||+.|+..
T Consensus       117 vH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~  196 (277)
T cd05607         117 VYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD  196 (277)
T ss_pred             EEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence                        00       0        00111234689999999999888888888          99999999874


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....  ........ ........ .       . .......+.+++..||+.+ .+||+.
T Consensus       197 ~~~~--~~~~~~~~-~~~~~~~~-~-------~-~~~~~~~~~~li~~~L~~~P~~R~~~  244 (277)
T cd05607         197 HKEK--VAKEELKR-RTLEDEVK-F-------E-HQNFTEESKDICRLFLAKKPEDRLGS  244 (277)
T ss_pred             Ccch--hhHHHHHH-Hhhccccc-c-------c-cccCCHHHHHHHHHHhccCHhhCCCC
Confidence            2211  11111111 11111110 0       0 0112234567888999999 999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.37  E-value=4.1e-12  Score=97.51  Aligned_cols=144  Identities=19%  Similarity=0.274  Sum_probs=98.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++++++           ...+..++|+||+++++|.+++...... .++|..+..++.++          
T Consensus        42 ~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~  120 (257)
T cd08225          42 EKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHDR  120 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999887           6777899999999999999999765433 57899888888777          


Q ss_pred             --------------CCCCcc-----------------ccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------LADQTY-----------------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------~~~~~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                    ..+...                 ......|++.|+|||+..+..++.++          |+++|..
T Consensus       121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08225         121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH  200 (257)
T ss_pred             CcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                          011000                 01123478899999999888888877          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+...      ....++.... .+.+.. +.        ......+.++..+||+.+ ++|||+
T Consensus       201 p~~~~------~~~~~~~~~~-~~~~~~-~~--------~~~~~~~~~~i~~~l~~~p~~Rpt~  248 (257)
T cd08225         201 PFEGN------NLHQLVLKIC-QGYFAP-IS--------PNFSRDLRSLISQLFKVSPRDRPSI  248 (257)
T ss_pred             CCCCc------cHHHHHHHHh-cccCCC-CC--------CCCCHHHHHHHHHHhccChhhCcCH
Confidence            98632      1222333222 111111 11        112234667778999999 999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.37  E-value=2.6e-12  Score=102.38  Aligned_cols=140  Identities=16%  Similarity=0.187  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.+..|..++..+.            ...+..|+||||+++|+|.+++....   .+++.+...++.++          
T Consensus        44 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~  120 (323)
T cd05615          44 VECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR  120 (323)
T ss_pred             HHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356778888887654            56678999999999999999997643   58888888888777          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       |         .........||+.|+|||++.+..++.++          |++||+.|
T Consensus       121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (323)
T cd05615         121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP  200 (323)
T ss_pred             CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCC
Confidence                          00       0         00111234589999999999988888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      ..... .......      .+    +......+.++..+|++.+ .+|++.
T Consensus       201 f~~~~~------~~~~~-~i~~~~~------~~----p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         201 FDGEDE------DELFQ-SIMEHNV------SY----PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CCCCCH------HHHHH-HHHhCCC------CC----CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            974321      11111 1212111      11    1112234567778999999 999973

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.37  E-value=4.6e-12  Score=100.77  Aligned_cols=140  Identities=16%  Similarity=0.184  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++..+.            .+.+..++||||+++|+|..++.+..   .+++.+...++.++          
T Consensus        39 ~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~  115 (318)
T cd05570          39 VECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER  115 (318)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456778888887763            56778999999999999999998653   48888887777766          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       +         .........||..|+|||++.+..++.++          |++||+.|
T Consensus       116 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~p  195 (318)
T cd05570         116 GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSP  195 (318)
T ss_pred             CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCC
Confidence                          00       0         00111234589999999999998888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      . ..+.........      .+    +......+.+++.+||+.+ ++||+.
T Consensus       196 f~~~~------~-~~~~~~i~~~~~------~~----~~~~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         196 FEGDD------E-DELFQSILEDEV------RY----PRWLSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             CCCCC------H-HHHHHHHHcCCC------CC----CCcCCHHHHHHHHHHccCCHHHcCCC
Confidence            87322      1 111122222211      11    1112234567788999999 999986

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.37  E-value=6.3e-13  Score=103.75  Aligned_cols=152  Identities=16%  Similarity=0.263  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ...+.|.+|++++.+++             .+.+..++|+||+++|+|.+++.+...  .++|..+..++.++       
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~L  124 (284)
T cd05081          47 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYL  124 (284)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHH
Confidence            34568999999999988             233568899999999999999976543  58899888888776       


Q ss_pred             -----------------CCCC---------cc----------ccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 -----------------LADQ---------TY----------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 -----------------~~~~---------~~----------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                       ..+.         ..          ......++..|+|||...+..++.++          |+
T Consensus       125 H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  204 (284)
T cd05081         125 GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL  204 (284)
T ss_pred             HHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence                             0000         00          00111234469999999888888877          99


Q ss_pred             ecCCCCCCCCCcc------CC---ccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          140 LTKEKPICLTTYE------EN---KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       140 ~tg~~p~~~~~~~------~~---~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +||..|+......      ..   ......+......+         .....+......+.+++.+||+.+ ++|||+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  274 (284)
T cd05081         205 FTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN---------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFS  274 (284)
T ss_pred             hhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC---------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            9987665421100      00   00000011111111         001111223346778888999999 9999973

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.37  E-value=1.5e-12  Score=102.05  Aligned_cols=146  Identities=16%  Similarity=0.253  Sum_probs=96.3

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~i  101 (208)
                      ...++.+|+.++.++ +           ...+..++||||+++|+|.++++...             ....++|...+++
T Consensus        58 ~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  137 (293)
T cd05053          58 DLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF  137 (293)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHH
Confidence            345789999999988 3           56677999999999999999997421             1225888888888


Q ss_pred             HHhC------------------------C-------CCC-----------ccccccccCCcCccCccccccCCCCcce--
Q 048710          102 VVDS------------------------L-------ADQ-----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS--  137 (208)
Q Consensus       102 ~~~i------------------------~-------~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks--  137 (208)
                      +.++                        .       .+.           ........+++.|+|||...+..++.++  
T Consensus       138 ~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  217 (293)
T cd05053         138 AYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDV  217 (293)
T ss_pred             HHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccce
Confidence            8776                        0       000           0001122346789999998888888777  


Q ss_pred             --------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |+++ |..|+....      . ..+......+..         ...+......+.+++.+||+.+ ++|||+
T Consensus       218 ~slG~il~el~~~g~~p~~~~~------~-~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  281 (293)
T cd05053         218 WSFGVLLWEIFTLGGSPYPGIP------V-EELFKLLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTF  281 (293)
T ss_pred             eehhhHHHHHhcCCCCCCCCCC------H-HHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence                    8887 888876331      1 112222222211         1112233446778888999999 999997


Q ss_pred             C
Q 048710          208 R  208 (208)
Q Consensus       208 ~  208 (208)
                      .
T Consensus       282 ~  282 (293)
T cd05053         282 K  282 (293)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.36  E-value=2.1e-12  Score=98.37  Aligned_cols=99  Identities=18%  Similarity=0.275  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.-.+|..+|..+.           .+.+.+|+||||++||.|.++|++...   ++....-=.|.+|           
T Consensus        88 veH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~~  164 (355)
T KOG0616|consen   88 VEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSLD  164 (355)
T ss_pred             HHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhcC
Confidence            356789999999888           788999999999999999999998653   4444333333333           


Q ss_pred             --------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 --------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 --------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                                .-.....+.+.+||+-|+|||.++++.++..+          ||+.|..||...
T Consensus       165 iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~  244 (355)
T KOG0616|consen  165 IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD  244 (355)
T ss_pred             eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence                                      00112224578899999999999999999888          999999999854

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.36  E-value=1.2e-12  Score=102.14  Aligned_cols=146  Identities=14%  Similarity=0.214  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC------------CCCCCHHHHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE------------EFPIAWEMQLHIV  102 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~------------~~~l~~~~r~~i~  102 (208)
                      ....+|.+|++++..++           ...+..++|+||+++|+|.++++....            ...++|.++..++
T Consensus        49 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  128 (280)
T cd05092          49 SARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA  128 (280)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHH
Confidence            34568999999999998           566778999999999999999976431            1247888888887


Q ss_pred             HhC------------------------CC-------CC--c---------cccccccCCcCccCccccccCCCCcce---
Q 048710          103 VDS------------------------LA-------DQ--T---------YMTTQVQGTFGYLDLQYFQSSPFTEKS---  137 (208)
Q Consensus       103 ~~i------------------------~~-------~~--~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks---  137 (208)
                      .++                        ..       +.  .         .......+++.|+|||...+..++.++   
T Consensus       129 ~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  208 (280)
T cd05092         129 SQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIW  208 (280)
T ss_pred             HHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHH
Confidence            776                        00       00  0         001122246789999999988888888   


Q ss_pred             -------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                             |++| |..|+.....      ...+. ....+...     ....    .....+.+++.+||+.+ .+||++
T Consensus       209 slG~il~el~~~g~~p~~~~~~------~~~~~-~~~~~~~~-----~~~~----~~~~~~~~li~~cl~~~P~~Rp~~  271 (280)
T cd05092         209 SFGVVLWEIFTYGKQPWYQLSN------TEAIE-CITQGREL-----ERPR----TCPPEVYAIMQGCWQREPQQRMVI  271 (280)
T ss_pred             HHHHHHHHHHcCCCCCCccCCH------HHHHH-HHHcCccC-----CCCC----CCCHHHHHHHHHHccCChhhCCCH
Confidence                   9998 8888763211      11111 11122110     1111    12234567888999999 999996

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.36  E-value=7.2e-12  Score=100.13  Aligned_cols=144  Identities=15%  Similarity=0.134  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|+.++.+++            ...+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~  124 (332)
T cd05614          48 VEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL  124 (332)
T ss_pred             HHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356788999999885            56778899999999999999997643   47777776666655          


Q ss_pred             -----------------------CCC--------CccccccccCCcCccCccccccCC-CCcce----------eEecCC
Q 048710          106 -----------------------LAD--------QTYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLTKE  143 (208)
Q Consensus       106 -----------------------~~~--------~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~tg~  143 (208)
                                             +-+        .........||..|+|||.+.+.. ++.++          |++||+
T Consensus       125 ~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~  204 (332)
T cd05614         125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA  204 (332)
T ss_pred             CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence                                   000        011122356899999999987643 56665          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.......   ....+.......      ++.+....    ...+.++..+||+.+ ++||+.
T Consensus       205 ~pf~~~~~~~---~~~~~~~~~~~~------~~~~~~~~----~~~~~~li~~~l~~dp~~R~~~  256 (332)
T cd05614         205 SPFTLEGERN---TQSEVSRRILKC------DPPFPSFI----GPEAQDLLHKLLRKDPKKRLGA  256 (332)
T ss_pred             CCCCCCCCCC---CHHHHHHHHhcC------CCCCCCCC----CHHHHHHHHHHcCCCHHHcCCC
Confidence            9997432111   112222222111      11221122    234556777999999 999953

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.36  E-value=8.4e-12  Score=99.49  Aligned_cols=138  Identities=16%  Similarity=0.182  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.+|..++           ...+..|+||||+++|+|.+++....   .+.+.....++.++            
T Consensus        45 ~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (323)
T cd05584          45 AHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQGI  121 (323)
T ss_pred             HHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            46789999999988           66778999999999999999997643   35666555555444            


Q ss_pred             ------------CC----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 ------------LA----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 ------------~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                  ..                ..........||++|+|||++.+..++.++          |++||+.||.
T Consensus       122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~  201 (323)
T cd05584         122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFT  201 (323)
T ss_pred             ecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCC
Confidence                        00                001112234689999999999888787777          9999999997


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      ...      ....... ...+..      .+...    ....+.+++..||+.+ ++||+
T Consensus       202 ~~~------~~~~~~~-~~~~~~------~~~~~----~~~~~~~li~~~l~~~p~~R~~  244 (323)
T cd05584         202 AEN------RKKTIDK-ILKGKL------NLPPY----LTPEARDLLKKLLKRNPSSRLG  244 (323)
T ss_pred             CCC------HHHHHHH-HHcCCC------CCCCC----CCHHHHHHHHHHcccCHhHcCC
Confidence            421      1111222 212211      11111    1234567778999999 99994

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.36  E-value=3.5e-12  Score=101.65  Aligned_cols=139  Identities=14%  Similarity=0.173  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+..|..++..+.            .+.+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        45 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~  121 (323)
T cd05616          45 ECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG  121 (323)
T ss_pred             HHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45677777776654            56778999999999999999997653   47788877777776           


Q ss_pred             -------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                   ..       |         .........||+.|+|||++.+..++.++          |++||+.||
T Consensus       122 ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf  201 (323)
T cd05616         122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  201 (323)
T ss_pred             EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCC
Confidence                         00       0         01112245689999999999998898888          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....      .. +.........          ..+......+.+++..|++.+ ++|++.
T Consensus       202 ~~~~~------~~-~~~~i~~~~~----------~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         202 EGEDE------DE-LFQSIMEHNV----------AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCH------HH-HHHHHHhCCC----------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            74321      11 1112222211          111122234567788999999 999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.36  E-value=1.6e-12  Score=100.94  Aligned_cols=144  Identities=16%  Similarity=0.262  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------CCCCCHHHHHHHHHhC----
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------EFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------~~~l~~~~r~~i~~~i----  105 (208)
                      ...|.+|+.++..++           ...+..++|+||+++|+|.+++.....       ...++|.....++.++    
T Consensus        53 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  132 (277)
T cd05032          53 RIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHH
Confidence            457899999999887           566789999999999999999975321       1147888888887776    


Q ss_pred             --------------------C-------CCC-----------ccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------L-------ADQ-----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------~-------~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                          .       .+.           ........+|..|+|||...+..++.++          
T Consensus       133 ~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (277)
T cd05032         133 AYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW  212 (277)
T ss_pred             HHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence                                0       000           0011223357889999999888888888          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++| |..||.....   ..    .......+....     +..    .....+.+++..||+.+ ++|||+
T Consensus       213 el~t~g~~p~~~~~~---~~----~~~~~~~~~~~~-----~~~----~~~~~~~~li~~~l~~~p~~Rpt~  268 (277)
T cd05032         213 EMATLAEQPYQGLSN---EE----VLKFVIDGGHLD-----LPE----NCPDKLLELMRMCWQYNPKMRPTF  268 (277)
T ss_pred             HhhccCCCCCccCCH---HH----HHHHHhcCCCCC-----CCC----CCCHHHHHHHHHHcCCChhhCCCH
Confidence            8998 8888863221   11    122222222111     111    12346678888999999 999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.36  E-value=3.6e-12  Score=98.36  Aligned_cols=147  Identities=19%  Similarity=0.245  Sum_probs=98.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-CCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-EFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.+|++++.+++           ...+..++|+||+++|+|.+++.+... ...+++.+...++.++         
T Consensus        45 ~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  124 (267)
T cd08224          45 ARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS  124 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            3567999999999987           566789999999999999999975321 2257888888877776         


Q ss_pred             ---------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..       +         .........|+..|+|||...+..++.++          |+++|+.
T Consensus       125 ~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~  204 (267)
T cd08224         125 KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS  204 (267)
T ss_pred             CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCC
Confidence                           00       0         00011234578899999999888888777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcH-HHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGK-DEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+...    ...+..... ....+...         ..+. .....+.+++.+||+.+ ++||++
T Consensus       205 p~~~~----~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~  255 (267)
T cd08224         205 PFYGD----KMNLYSLCK-KIEKCDYP---------PLPADHYSEELRDLVSRCINPDPEKRPDI  255 (267)
T ss_pred             CcccC----CccHHHHHh-hhhcCCCC---------CCChhhcCHHHHHHHHHHcCCCcccCCCH
Confidence            98632    122222221 12122111         1111 23345677888999999 999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.36  E-value=5.2e-12  Score=97.59  Aligned_cols=145  Identities=14%  Similarity=0.239  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++++++           .+.+..++|+||+++|+|.+++.+..   .+++.....++.++           
T Consensus        47 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~  123 (268)
T cd06630          47 VEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQ  123 (268)
T ss_pred             HHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999988           66788999999999999999997643   47788777777766           


Q ss_pred             -------------CCCCc---------------------cccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 -------------LADQT---------------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 -------------~~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                   ..+..                     .......||.+|+|||...+..++.++          |+++
T Consensus       124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~  203 (268)
T cd06630         124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT  203 (268)
T ss_pred             eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh
Confidence                         00100                     001123578899999999887777777          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..|+.....   ......+........         ..+.+......+.++..+|++.+ ++||+.
T Consensus       204 g~~p~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  258 (268)
T cd06630         204 AKPPWNAEKH---SNHLALIFKIASATT---------APSIPEHLSPGLRDVTLRCLELQPEDRPPS  258 (268)
T ss_pred             CCCCCCCCCC---cchHHHHHHHhccCC---------CCCCchhhCHHHHHHHHHHcCCCcccCcCH
Confidence            9999863221   111111111111110         11222233455677888999999 999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.35  E-value=1.1e-12  Score=104.08  Aligned_cols=145  Identities=14%  Similarity=0.289  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++|.+|+.++..++          ...+..++|+||+++|+|.+++.....  .+++...+.++.++          
T Consensus        51 ~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~  128 (316)
T cd05108          51 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER  128 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc
Confidence            34567999999999987          444567899999999999999987543  47788777777776          


Q ss_pred             --------------CC-------C----------Cc-cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------LA-------D----------QT-YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------~~-------~----------~~-~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                    ..       +          .. .......++..|+|||.+.+..++.++          |++| |
T Consensus       129 ~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g  208 (316)
T cd05108         129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  208 (316)
T ss_pred             CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCC
Confidence                          00       0          00 001122236789999999988888888          8887 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..|+....      ... +......+...         ..+..+...+.+++..||+.+ ++||++.
T Consensus       209 ~~p~~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~  259 (316)
T cd05108         209 SKPYDGIP------ASE-ISSILEKGERL---------PQPPICTIDVYMIMVKCWMIDADSRPKFR  259 (316)
T ss_pred             CCCCCCCC------HHH-HHHHHhCCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            99987321      111 12222222110         111122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.35  E-value=9.1e-12  Score=99.34  Aligned_cols=139  Identities=10%  Similarity=0.122  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+..|++++..++           ...+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        39 ~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~  115 (325)
T cd05594          39 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK  115 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            456788999998876           66788999999999999999997643   47787777666655           


Q ss_pred             -----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +-+       .........||+.|+|||++.+..++.++          |++||..|
T Consensus       116 ~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~P  195 (325)
T cd05594         116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  195 (325)
T ss_pred             CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCC
Confidence                                   000       00111234689999999999888888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |.....      .. ..........      .+....    ...+.++..+|++.+ ++|++
T Consensus       196 f~~~~~------~~-~~~~i~~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~~  240 (325)
T cd05594         196 FYNQDH------EK-LFELILMEEI------RFPRTL----SPEAKSLLSGLLKKDPKQRLG  240 (325)
T ss_pred             CCCCCH------HH-HHHHHhcCCC------CCCCCC----CHHHHHHHHHHhhcCHHHhCC
Confidence            974321      11 1111111111      111112    224556777999999 99973

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.35  E-value=2.6e-12  Score=100.03  Aligned_cols=151  Identities=18%  Similarity=0.270  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|++++.+++             ......++|+||+++|+|.+++.....  .++|..+..++.++        
T Consensus        49 ~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH  126 (284)
T cd05038          49 HRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLG  126 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999887             225578999999999999999986543  48899888888877        


Q ss_pred             ----------------CCCC---------c----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------LADQ---------T----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~~~~---------~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      ..+.         .          .......++..|++||...+..++.++          |++
T Consensus       127 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~  206 (284)
T cd05038         127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF  206 (284)
T ss_pred             hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee
Confidence                            0000         0          000112335679999999888787777          999


Q ss_pred             cCCCCCCCCCccCCc--------cHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          141 TKEKPICLTTYEENK--------SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       141 tg~~p~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||..|+.........        .....+......+         .....+......+.+++.+||+.+ ++||+|.
T Consensus       207 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  274 (284)
T cd05038         207 TYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG---------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFA  274 (284)
T ss_pred             ccCCCcccccchhccccccccccccHHHHHHHHHcC---------CcCCCCccCCHHHHHHHHHHhccChhhCCCHH
Confidence            999987643211100        0011111111111         111112223356778899999999 9999973

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.35  E-value=1.3e-12  Score=102.36  Aligned_cols=146  Identities=16%  Similarity=0.266  Sum_probs=97.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC---------------------CCCCCC
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN---------------------EEFPIA   94 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~---------------------~~~~l~   94 (208)
                      ...+|.+|+.++..++           ...+..++|+||+++|+|.+++....                     ....++
T Consensus        46 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  125 (290)
T cd05045          46 ELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT  125 (290)
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccC
Confidence            3567999999999988           56677899999999999999986421                     112478


Q ss_pred             HHHHHHHHHhC------------------------CC-------C--Cc---------cccccccCCcCccCccccccCC
Q 048710           95 WEMQLHIVVDS------------------------LA-------D--QT---------YMTTQVQGTFGYLDLQYFQSSP  132 (208)
Q Consensus        95 ~~~r~~i~~~i------------------------~~-------~--~~---------~~~~~~~gt~~y~aPE~~~~~~  132 (208)
                      |...+.++.++                        ..       +  ..         .......++..|+|||...+..
T Consensus       126 ~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  205 (290)
T cd05045         126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI  205 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC
Confidence            88888888877                        00       0  00         0011223567899999998888


Q ss_pred             CCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC
Q 048710          133 FTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN  201 (208)
Q Consensus       133 ~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~  201 (208)
                      ++.++          |++| |..|+....       ...+......+.     ..    +.+......+.+++.+||+.+
T Consensus       206 ~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~i~~cl~~~  269 (290)
T cd05045         206 YTTQSDVWSFGVLLWEIVTLGGNPYPGIA-------PERLFNLLKTGY-----RM----ERPENCSEEMYNLMLTCWKQE  269 (290)
T ss_pred             cchHhHHHHHHHHHHHHHhcCCCCCCCCC-------HHHHHHHHhCCC-----CC----CCCCCCCHHHHHHHHHHccCC
Confidence            88887          9998 998886321       111222222221     01    111122345678888999999


Q ss_pred             -CCCCCCC
Q 048710          202 -EKKPTMR  208 (208)
Q Consensus       202 -~~RPsm~  208 (208)
                       ++||+++
T Consensus       270 P~~Rp~~~  277 (290)
T cd05045         270 PDKRPTFA  277 (290)
T ss_pred             cccCCCHH
Confidence             9999973

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.35  E-value=1.8e-12  Score=100.50  Aligned_cols=147  Identities=16%  Similarity=0.260  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~  100 (208)
                      .....|.+|+.++.++.            ...+..++||||+++|+|.+++++..             ....+++.+...
T Consensus        37 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  116 (270)
T cd05047          37 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  116 (270)
T ss_pred             HHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHH
Confidence            34567999999999883            55677899999999999999997532             112477888888


Q ss_pred             HHHhC------------------------C-------CC--Ccc------ccccccCCcCccCccccccCCCCcce----
Q 048710          101 IVVDS------------------------L-------AD--QTY------MTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       101 i~~~i------------------------~-------~~--~~~------~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                      ++.++                        .       .+  ...      .......++.|+|||++.+..++.++    
T Consensus       117 ~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~s  196 (270)
T cd05047         117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS  196 (270)
T ss_pred             HHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHH
Confidence            77766                        0       00  000      00111225679999999888888777    


Q ss_pred             ------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                            |++| |..||....      ...... ....+..         .+.+......+.+++.+||+.+ .+|||+.
T Consensus       197 lG~il~el~~~g~~pf~~~~------~~~~~~-~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  259 (270)
T cd05047         197 YGVLLWEIVSLGGTPYCGMT------CAELYE-KLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFA  259 (270)
T ss_pred             HHHHHHHHHcCCCCCccccC------HHHHHH-HHhCCCC---------CCCCCcCCHHHHHHHHHHcccChhhCCCHH
Confidence                  8887 999986321      111111 1111111         0111122335678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.35  E-value=5.4e-12  Score=99.00  Aligned_cols=154  Identities=18%  Similarity=0.271  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--------CCCCCHHHHHHHHHhC-
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--------EFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--------~~~l~~~~r~~i~~~i-  105 (208)
                      ....+|.+|++++.+++           ...+..++|+||+++|+|.++|.+...        ...+++.....++.++ 
T Consensus        61 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  140 (296)
T cd05051          61 NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIA  140 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHH
Confidence            44568999999999998           455789999999999999999976431        1257888888877766 


Q ss_pred             -----------------------CC-------C--Cc---------cccccccCCcCccCccccccCCCCcce-------
Q 048710          106 -----------------------LA-------D--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -----------------------~~-------~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                             ..       +  ..         .......+|..|+|||.+.+..++.++       
T Consensus       141 ~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  220 (296)
T cd05051         141 SGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGV  220 (296)
T ss_pred             HHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHH
Confidence                                   00       0  00         011223456789999999888888888       


Q ss_pred             ---eEec--CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ---NLLT--KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ---E~~t--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                         |+++  +..|+....   .......+......+.....      ...+...+..+.+++.+||+.+ ++|||++
T Consensus       221 ~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~  288 (296)
T cd05051         221 TLWEILTLCREQPYEHLT---DQQVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFR  288 (296)
T ss_pred             HHHHHHhcCCCCCCCCcC---hHHHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHH
Confidence               8777  666765321   11121222211111111110      1111223356788999999999 9999973

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.35  E-value=1.5e-12  Score=107.39  Aligned_cols=152  Identities=16%  Similarity=0.247  Sum_probs=104.1

Q ss_pred             ccchhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           42 LIYEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ...++..+.|.+|+.++.+.|          ..++...||..+|+|-||+.+||..+.  +++-.+...||.+|      
T Consensus       426 ~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~Y  503 (678)
T KOG0193|consen  426 DPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDY  503 (678)
T ss_pred             CCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhh
Confidence            445667889999999999998          556666999999999999999998654  58888888888888      


Q ss_pred             ------------------CCC------------------CccccccccCCcCccCccccccC---CCCcce---------
Q 048710          106 ------------------LAD------------------QTYMTTQVQGTFGYLDLQYFQSS---PFTEKS---------  137 (208)
Q Consensus       106 ------------------~~~------------------~~~~~~~~~gt~~y~aPE~~~~~---~~~~ks---------  137 (208)
                                        ..+                  .......--|...|||||+++..   +|++.|         
T Consensus       504 LHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~  583 (678)
T KOG0193|consen  504 LHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW  583 (678)
T ss_pred             hhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence                              110                  01111223367899999999754   555555         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |++||.-||..-. .+      .+.-....|.+    -+++ .....++..++-+|...||..+ ++||.+
T Consensus       584 YELltg~lPysi~~-~d------qIifmVGrG~l----~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F  643 (678)
T KOG0193|consen  584 YELLTGELPYSIQN-RD------QIIFMVGRGYL----MPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLF  643 (678)
T ss_pred             HHHHhCcCCcCCCC-hh------heEEEeccccc----Cccc-hhhhccCHHHHHHHHHHHHhcCcccCccH
Confidence             9999999998321 11      11101112211    1111 0122466677888889999999 999986

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.35  E-value=7e-12  Score=96.60  Aligned_cols=141  Identities=10%  Similarity=0.271  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|..|+.++..++           ...+..++||||+++|+|.++++....  .++|..+.+++.++           
T Consensus        43 ~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          43 SESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             HHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            357888999999886           555778999999999999999986543  57888888888777           


Q ss_pred             -------------CCCCc--------------------cccccccCCcCccCcccccc-CCCCcce----------eEec
Q 048710          106 -------------LADQT--------------------YMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLT  141 (208)
Q Consensus       106 -------------~~~~~--------------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~t  141 (208)
                                   ..+..                    .......++..|+|||++.+ ..++.++          |+++
T Consensus       121 iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~  200 (258)
T cd05078         121 LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFS  200 (258)
T ss_pred             eecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHc
Confidence                         00000                    00112457889999999976 4466666          8999


Q ss_pred             CC-CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KE-KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |. .|+....      ...... .....       ..+..    .....+.+++..||+.+ ++|||++
T Consensus       201 g~~~~~~~~~------~~~~~~-~~~~~-------~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~  251 (258)
T cd05078         201 GGDKPLSALD------SQKKLQ-FYEDR-------HQLPA----PKWTELANLINQCMDYEPDFRPSFR  251 (258)
T ss_pred             CCCCChhhcc------HHHHHH-HHHcc-------ccCCC----CCcHHHHHHHHHHhccChhhCCCHH
Confidence            84 5544221      111111 11110       11111    11235678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.35  E-value=5.2e-12  Score=100.58  Aligned_cols=139  Identities=17%  Similarity=0.177  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|.+++..+.            .+.+..|+||||+++|+|..++....   .+++.....++.++          
T Consensus        39 ~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  115 (321)
T cd05591          39 VDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH  115 (321)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456788888887653            56788999999999999999997653   47787777766666          


Q ss_pred             --------------CC----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..                ..........||..|+|||.+.+..++.++          |++||+.|
T Consensus       116 ~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P  195 (321)
T cd05591         116 GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP  195 (321)
T ss_pred             CeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCC
Confidence                          00                001112234589999999999988888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |....      ...... ....+..      ..    +......+.++...|++.+ ++||+
T Consensus       196 f~~~~------~~~~~~-~i~~~~~------~~----p~~~~~~~~~ll~~~L~~dp~~R~~  240 (321)
T cd05591         196 FEADN------EDDLFE-SILHDDV------LY----PVWLSKEAVSILKAFMTKNPNKRLG  240 (321)
T ss_pred             CCCCC------HHHHHH-HHHcCCC------CC----CCCCCHHHHHHHHHHhccCHHHcCC
Confidence            97432      111122 2222211      00    1111234567777999999 99994

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.34  E-value=2e-12  Score=102.26  Aligned_cols=146  Identities=16%  Similarity=0.281  Sum_probs=95.8

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~i  101 (208)
                      ...++..|+.++.++.            ...+..++|+||+++|+|.+++.....             ...++|.+.+++
T Consensus        66 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  145 (307)
T cd05098          66 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC  145 (307)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHH
Confidence            3467889999999883            566789999999999999999976421             124889888888


Q ss_pred             HHhC------------------------C-------CC--Cc---------cccccccCCcCccCccccccCCCCcce--
Q 048710          102 VVDS------------------------L-------AD--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS--  137 (208)
Q Consensus       102 ~~~i------------------------~-------~~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks--  137 (208)
                      +.++                        .       .+  ..         .......+++.|+|||...+..++.++  
T Consensus       146 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  225 (307)
T cd05098         146 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  225 (307)
T ss_pred             HHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHH
Confidence            8877                        0       00  00         000112234689999999888888887  


Q ss_pred             --------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |++| |..|+....      . ..+......+...         +.+......+.+++.+||+.+ ++||+|
T Consensus       226 wslG~~l~el~~~g~~p~~~~~------~-~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~  289 (307)
T cd05098         226 WSFGVLLWEIFTLGGSPYPGVP------V-EELFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTF  289 (307)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCC------H-HHHHHHHHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence                    8888 888876321      1 1122222222111         111223345667888999999 999997


Q ss_pred             C
Q 048710          208 R  208 (208)
Q Consensus       208 ~  208 (208)
                      .
T Consensus       290 ~  290 (307)
T cd05098         290 K  290 (307)
T ss_pred             H
Confidence            3

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.34  E-value=1.8e-12  Score=99.51  Aligned_cols=142  Identities=18%  Similarity=0.328  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|++++.+++           ......++|+||+++|+|.+++.....  .++|.....++.++           
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~  120 (256)
T cd05112          43 EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESSN  120 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            357999999999987           566778999999999999999986543  47788777776655           


Q ss_pred             -------------CCCC---------c--------cccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LADQ---------T--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~~~---------~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..+.         .        .......++.+|+|||.+.++.++.++          |+++ |..
T Consensus       121 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~  200 (256)
T cd05112         121 VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT  200 (256)
T ss_pred             ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC
Confidence                         0000         0        001122345789999999888888777          8888 888


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+....      ....+ .....+.  ...++.+       ....+.+++.+||+.+ ++||++
T Consensus       201 p~~~~~------~~~~~-~~~~~~~--~~~~~~~-------~~~~~~~l~~~~l~~~p~~Rp~~  248 (256)
T cd05112         201 PYENRS------NSEVV-ETINAGF--RLYKPRL-------ASQSVYELMQHCWKERPEDRPSF  248 (256)
T ss_pred             CCCcCC------HHHHH-HHHhCCC--CCCCCCC-------CCHHHHHHHHHHcccChhhCCCH
Confidence            887321      11111 1222221  1112221       1245778888999999 999997

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=1.2e-11  Score=97.93  Aligned_cols=146  Identities=14%  Similarity=0.179  Sum_probs=92.1

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCC-CCCHHHHHHHHHhC------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEF-PIAWEMQLHIVVDS------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~-~l~~~~r~~i~~~i------------  105 (208)
                      ...+|+++|.+++           ..++..|+|+||++||.|.+++-.++... ...=..-.+++..+            
T Consensus       222 ~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRD  301 (475)
T KOG0615|consen  222 DVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRD  301 (475)
T ss_pred             hhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccccc
Confidence            4579999999999           77888899999999999999987654210 11111112333333            


Q ss_pred             --------------------------CCCCccccccccCCcCccCccccccCCCCcce-------------eEecCCCCC
Q 048710          106 --------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-------------NLLTKEKPI  146 (208)
Q Consensus       106 --------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-------------E~~tg~~p~  146 (208)
                                                ..+....+.+.+||++|.|||++.++.++-..             -.+||..||
T Consensus       302 iKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPF  381 (475)
T KOG0615|consen  302 IKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPF  381 (475)
T ss_pred             CCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCc
Confidence                                      12233445688999999999999865443322             678899999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +...  ..+.+.+.+    ..|...  +.|    ..-.+..++...++.+.+..| +.|||.
T Consensus       382 S~~~--~~~sl~eQI----~~G~y~--f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~  431 (475)
T KOG0615|consen  382 SEEY--TDPSLKEQI----LKGRYA--FGP----LQWDRISEEALDLINWMLVVDPENRPSA  431 (475)
T ss_pred             cccc--CCccHHHHH----hcCccc--ccC----hhhhhhhHHHHHHHHHhhEeCcccCcCH
Confidence            8432  222233322    233221  011    011234455667777999999 999985

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.34  E-value=1e-11  Score=98.96  Aligned_cols=139  Identities=16%  Similarity=0.155  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHhh---cc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           48 VNKLINEVVILSQ---IN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~---l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ...+..|.+++..   ++           ...+..|+||||+++|+|..+++..    .+++.....++.++        
T Consensus        43 ~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH  118 (324)
T cd05589          43 VESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLH  118 (324)
T ss_pred             HHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH
Confidence            3456667666543   33           5678899999999999999998753    48888888777777        


Q ss_pred             -------------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                               +-+       .........||+.|+|||.+.+..++.++          |++||+
T Consensus       119 ~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~  198 (324)
T cd05589         119 ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE  198 (324)
T ss_pred             hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCC
Confidence                                     000       01112245689999999999988888887          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ...... ....+..      ..    +......+.+++.+||+.+ ++||++
T Consensus       199 ~pf~~~~------~~~~~~-~i~~~~~------~~----p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         199 SPFPGDD------EEEVFD-SIVNDEV------RY----PRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             CCCCCCC------HHHHHH-HHHhCCC------CC----CCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence            9987432      111111 1212211      11    1112234567788999999 999964

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.34  E-value=7.7e-12  Score=100.16  Aligned_cols=100  Identities=18%  Similarity=0.280  Sum_probs=74.0

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+|.+|++++.+++           .+.+..++||||+++|+|.+++.+..   .+++.....++.++         
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~  121 (333)
T cd06650          45 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE  121 (333)
T ss_pred             HHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence            33467999999999997           67788999999999999999997643   35666555555444         


Q ss_pred             ----------------CC-------CC-------ccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ----------------LA-------DQ-------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------~~-------~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                      ..       +.       ........||..|+|||.+.+..++.++          |+++|+.|
T Consensus       122 ~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  201 (333)
T cd06650         122 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                            00       00       0001234588999999999888888877          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       202 ~~~  204 (333)
T cd06650         202 IPP  204 (333)
T ss_pred             CCC
Confidence            874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.34  E-value=1.2e-11  Score=95.01  Aligned_cols=146  Identities=16%  Similarity=0.247  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++|.+|+.++.+++          ...+..++|+||+++|+|.+++.+... ..++|.....++.++          
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~  116 (257)
T cd05040          38 DIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK  116 (257)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC
Confidence            34568999999999998          222788999999999999999987543 268888888777776          


Q ss_pred             --------------CCCC-------------------ccccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 --------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 --------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                    ..+.                   ........++.+|++||++.+..++.++          |++| 
T Consensus       117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~  196 (257)
T cd05040         117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTY  196 (257)
T ss_pred             CccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhC
Confidence                          0000                   0001123467899999999888888888          8998 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.|+.....      .+........+...         ..+...+..+.+++.+||+.+ ++||++
T Consensus       197 g~~p~~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~  248 (257)
T cd05040         197 GEEPWAGLSG------SQILKKIDKEGERL---------ERPEACPQDIYNVMLQCWAHNPADRPTF  248 (257)
T ss_pred             CCCCCCCCCH------HHHHHHHHhcCCcC---------CCCccCCHHHHHHHHHHCCCCcccCCCH
Confidence            9999863321      11122111111110         111122345778888999999 999996

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.9e-13  Score=108.70  Aligned_cols=148  Identities=20%  Similarity=0.232  Sum_probs=97.9

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHH-HHHHhC----
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQL-HIVVDS----  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~-~i~~~i----  105 (208)
                      .+....+...|+.+|++++           .....+.++||||.+|++.+.|....-  .....|..|. -.+++.    
T Consensus        51 ~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~  130 (467)
T KOG0201|consen   51 AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE  130 (467)
T ss_pred             cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc
Confidence            4455678899999999988           677788899999999999999986432  1122332221 111111    


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    ...........+||+.|||||++.+..|+.|+          ||++|..|
T Consensus       131 ~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP  210 (467)
T KOG0201|consen  131 KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPP  210 (467)
T ss_pred             ceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCC
Confidence                                          11112223577899999999999998999999          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +...-+....            -.+++-..|.+.+.+. ..+.   +.+-.|++.+ ..|||-
T Consensus       211 ~s~~hPmrvl------------flIpk~~PP~L~~~~S-~~~k---EFV~~CL~k~P~~RpsA  257 (467)
T KOG0201|consen  211 HSKLHPMRVL------------FLIPKSAPPRLDGDFS-PPFK---EFVEACLDKNPEFRPSA  257 (467)
T ss_pred             CcccCcceEE------------EeccCCCCCccccccC-HHHH---HHHHHHhhcCcccCcCH
Confidence            9854221100            0233334455544332 3344   4455999999 999984

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.34  E-value=7.2e-12  Score=100.64  Aligned_cols=138  Identities=18%  Similarity=0.217  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++..++           .+.+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        75 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~  151 (340)
T PTZ00426         75 VDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN  151 (340)
T ss_pred             HHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457889999999988           67788999999999999999998654   47777776666665           


Q ss_pred             -------------CCC---------Cc----cccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 -------------LAD---------QT----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 -------------~~~---------~~----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                   ..+         ..    .......||+.|+|||++.+..++.++          |++||..||...
T Consensus       152 ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~  231 (340)
T PTZ00426        152 IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN  231 (340)
T ss_pred             eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence                         000         00    112245689999999999888788777          999999999742


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      ..       .........+..      .+....+    ..+.+++..|++.+ .+|+
T Consensus       232 ~~-------~~~~~~i~~~~~------~~p~~~~----~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        232 EP-------LLIYQKILEGII------YFPKFLD----NNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             CH-------HHHHHHHhcCCC------CCCCCCC----HHHHHHHHHHcccCHHHcC
Confidence            11       112222222221      0111112    23456777999999 9996

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.34  E-value=1.5e-12  Score=99.98  Aligned_cols=144  Identities=14%  Similarity=0.260  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ...|.+|+.++.+++          ...+..++|+||+++|+|.+++...... .+++..+.+++.++            
T Consensus        43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~~  121 (254)
T cd05083          43 AQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRA-LVSVIQLLQFSLDVAEGMEYLESKKL  121 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            357899999999888          3445579999999999999999865432 57888888877766            


Q ss_pred             ------------CC-------CC--cc----ccccccCCcCccCccccccCCCCcce----------eEec-CCCCCCCC
Q 048710          106 ------------LA-------DQ--TY----MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPICLT  149 (208)
Q Consensus       106 ------------~~-------~~--~~----~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~~~  149 (208)
                                  ..       +.  ..    .......+..|+|||.+.+..++.++          |+++ |..|+...
T Consensus       122 ~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  201 (254)
T cd05083         122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM  201 (254)
T ss_pred             eccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence                        00       00  00    01122235679999999888888777          8887 88888633


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .      ... .......+...         +.+......+.+++.+||+.+ ++||+++
T Consensus       202 ~------~~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  245 (254)
T cd05083         202 S------LKE-VKECVEKGYRM---------EPPEGCPADVYVLMTSCWETEPKKRPSFH  245 (254)
T ss_pred             C------HHH-HHHHHhCCCCC---------CCCCcCCHHHHHHHHHHcCCChhhCcCHH
Confidence            2      111 11122222111         111122345667888999999 9999973

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.34  E-value=3.2e-12  Score=99.54  Aligned_cols=142  Identities=15%  Similarity=0.265  Sum_probs=95.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           ...+..++|+||+++|+|.+++.+.    .+++.....++.++          
T Consensus        45 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~  120 (277)
T cd06641          45 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE  120 (277)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC
Confidence            3457899999999987           5678899999999999999999753    47888888877766          


Q ss_pred             --------------CCCC----------------ccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+.                ........|+..|++||...+..++.++          |++||..|
T Consensus       121 ~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  200 (277)
T cd06641         121 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence                          0000                0011123578899999999887777777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +.....      ..... ....+..     +.+.    ......+.+++.+||+.+ ++||++.
T Consensus       201 ~~~~~~------~~~~~-~~~~~~~-----~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (277)
T cd06641         201 HSELHP------MKVLF-LIPKNNP-----PTLE----GNYSKPLKEFVEACLNKEPSFRPTAK  248 (277)
T ss_pred             CCccch------HHHHH-HHhcCCC-----CCCC----cccCHHHHHHHHHHccCChhhCcCHH
Confidence            863211      11111 1111111     1111    122344567778999999 9999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.33  E-value=2.6e-12  Score=100.04  Aligned_cols=147  Identities=13%  Similarity=0.221  Sum_probs=97.9

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCC-----CCCCHHHHHHHHHhC--
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEE-----FPIAWEMQLHIVVDS--  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~-----~~l~~~~r~~i~~~i--  105 (208)
                      ......+.+|+.++.+++            ......++++||+++|+|.+++......     ..+++.....++.++  
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~  128 (280)
T cd05043          49 EIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC  128 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence            344567899999999888            3457789999999999999999764321     368899988888877  


Q ss_pred             ----------------------CCC-----------------Ccc-ccccccCCcCccCccccccCCCCcce--------
Q 048710          106 ----------------------LAD-----------------QTY-MTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 ----------------------~~~-----------------~~~-~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                                            ..+                 ... ......++..|+|||.+.+..++.++        
T Consensus       129 ~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~  208 (280)
T cd05043         129 GMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVL  208 (280)
T ss_pred             HHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH
Confidence                                  000                 000 01123456789999999888888888        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++| |+.||.....      .. +......+..     ..    .+......+.+++.+||+.+ ++|||+
T Consensus       209 l~el~~~g~~p~~~~~~------~~-~~~~~~~~~~-----~~----~~~~~~~~~~~li~~~l~~~p~~Rps~  266 (280)
T cd05043         209 LWELMTLGQTPYVEIDP------FE-MAAYLKDGYR-----LA----QPINCPDELFAVMACCWALDPEERPSF  266 (280)
T ss_pred             HHHHhcCCCCCcCcCCH------HH-HHHHHHcCCC-----CC----CCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence              8998 9999873211      11 1122222211     00    11122345678888999999 999996

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.33  E-value=3.1e-12  Score=99.15  Aligned_cols=144  Identities=14%  Similarity=0.243  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .++|..+..++.++          
T Consensus        49 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~  126 (270)
T cd05056          49 SVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK  126 (270)
T ss_pred             HHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34568999999999987          455678899999999999999976433  48899888887766          


Q ss_pred             --------------CC-------C---------C-ccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 --------------LA-------D---------Q-TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 --------------~~-------~---------~-~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                    ..       +         . ........++..|+|||.+.+..++.++          |+++ |.
T Consensus       127 ~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  206 (270)
T cd05056         127 RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV  206 (270)
T ss_pred             CeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCC
Confidence                          00       0         0 0001122234689999999888888777          8775 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....   ...   . .....+...     .+..    .....+.+++.+||..+ ++|||+
T Consensus       207 ~pf~~~~~---~~~---~-~~~~~~~~~-----~~~~----~~~~~~~~li~~~l~~~P~~Rpt~  255 (270)
T cd05056         207 KPFQGVKN---NDV---I-GRIENGERL-----PMPP----NCPPTLYSLMTKCWAYDPSKRPRF  255 (270)
T ss_pred             CCCCCCCH---HHH---H-HHHHcCCcC-----CCCC----CCCHHHHHHHHHHcCCChhhCcCH
Confidence            99874321   111   1 112222111     1111    22345677888999999 999986

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.33  E-value=3.9e-12  Score=102.03  Aligned_cols=145  Identities=17%  Similarity=0.275  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------------------
Q 048710           48 VNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNE-------------------------   89 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------------------   89 (208)
                      .+.+..|+.++.++.             ...+..++++||+++|+|.++|.....                         
T Consensus        54 ~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (337)
T cd05054          54 YKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRL  133 (337)
T ss_pred             HHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccccccc
Confidence            456888999999883             344678899999999999999864321                         


Q ss_pred             ---------------------------------CCCCCHHHHHHHHHhC------------------------CC-----
Q 048710           90 ---------------------------------EFPIAWEMQLHIVVDS------------------------LA-----  107 (208)
Q Consensus        90 ---------------------------------~~~l~~~~r~~i~~~i------------------------~~-----  107 (208)
                                                       ...++|..+.+++.++                        ..     
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vk  213 (337)
T cd05054         134 DSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVK  213 (337)
T ss_pred             ccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEE
Confidence                                             1157899898888888                        00     


Q ss_pred             --C--C---------ccccccccCCcCccCccccccCCCCcce----------eEec-CCCCCCCCCccCCccHHHHHHH
Q 048710          108 --D--Q---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLR  163 (208)
Q Consensus       108 --~--~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~  163 (208)
                        +  .         ........++..|+|||++.+..++.++          |++| |..||......      .....
T Consensus       214 L~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~------~~~~~  287 (337)
T cd05054         214 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID------EEFCR  287 (337)
T ss_pred             EeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc------HHHHH
Confidence              0  0         0011123456789999999988898888          8887 99998642211      11111


Q ss_pred             HHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          164 AMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       164 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....+...         ..+......+.+++.+||+.+ ++||++
T Consensus       288 ~~~~~~~~---------~~~~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         288 RLKEGTRM---------RAPEYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HHhccCCC---------CCCccCCHHHHHHHHHHccCChhhCcCH
Confidence            22222111         111223346788999999999 999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.33  E-value=3e-12  Score=100.77  Aligned_cols=146  Identities=14%  Similarity=0.239  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~i  101 (208)
                      ..+.|.+|+.++.++.            ...+..++|+||+++|+|.+++++...             ...+++.....+
T Consensus        45 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  124 (297)
T cd05089          45 DHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF  124 (297)
T ss_pred             HHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHH
Confidence            3467999999999883            556778999999999999999975321             114778888887


Q ss_pred             HHhC------------------------CCCC---------cc------ccccccCCcCccCccccccCCCCcce-----
Q 048710          102 VVDS------------------------LADQ---------TY------MTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       102 ~~~i------------------------~~~~---------~~------~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +.++                        ..+.         ..      .......+..|+|||+..+..++.++     
T Consensus       125 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl  204 (297)
T cd05089         125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSF  204 (297)
T ss_pred             HHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHH
Confidence            7776                        0000         00      00011124579999999888888888     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                           |++| |..||.....      ..... ....+.     .+    ..+......+.+++.+||+.+ ++||++.
T Consensus       205 G~il~el~t~g~~pf~~~~~------~~~~~-~~~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  266 (297)
T cd05089         205 GVLLWEIVSLGGTPYCGMTC------AELYE-KLPQGY-----RM----EKPRNCDDEVYELMRQCWRDRPYERPPFA  266 (297)
T ss_pred             HHHHHHHHcCCCCCCCCCCH------HHHHH-HHhcCC-----CC----CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence                 9987 9999874321      11111 111111     11    111122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.33  E-value=2.6e-12  Score=101.37  Aligned_cols=147  Identities=14%  Similarity=0.266  Sum_probs=95.8

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~  100 (208)
                      ....++.+|+.++..+ +           ...+..++||||+++|+|.++|.+...             ...++|.++..
T Consensus        62 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (304)
T cd05101          62 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS  141 (304)
T ss_pred             HHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence            3456799999999988 3           566778999999999999999976421             12477888887


Q ss_pred             HHHhC------------------------C-------CCC-----------ccccccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS------------------------L-------ADQ-----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i------------------------~-------~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      ++.++                        .       .+.           ........++..|+|||.+.+..++.++ 
T Consensus       142 ~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         142 CTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             HHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            77776                        0       000           0011123346789999999888888888 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |++| |..|+....      ... +......+...         ..+......+.+++.+||+.+ ++||+
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps  285 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIP------VEE-LFKLLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPT  285 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCC------HHH-HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCC
Confidence                     8888 777776321      111 22222222111         111123345667888999999 99999


Q ss_pred             CC
Q 048710          207 MR  208 (208)
Q Consensus       207 m~  208 (208)
                      |.
T Consensus       286 ~~  287 (304)
T cd05101         286 FK  287 (304)
T ss_pred             HH
Confidence            73

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.33  E-value=1.3e-11  Score=95.67  Aligned_cols=149  Identities=13%  Similarity=0.157  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC---------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i---------  105 (208)
                      ...|.+|+.++.+++           .+.+..++||||+++|+|.++++....  ...+++.....++.++         
T Consensus        39 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (269)
T cd05087          39 QMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK  118 (269)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999988           556778999999999999999975321  1245666666666655         


Q ss_pred             ---------------C-------CCC--c---------cccccccCCcCccCccccccC-------CCCcce--------
Q 048710          106 ---------------L-------ADQ--T---------YMTTQVQGTFGYLDLQYFQSS-------PFTEKS--------  137 (208)
Q Consensus       106 ---------------~-------~~~--~---------~~~~~~~gt~~y~aPE~~~~~-------~~~~ks--------  137 (208)
                                     .       .+.  .         .......|+..|+|||++.+.       .++.++        
T Consensus       119 ~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  198 (269)
T cd05087         119 NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVT  198 (269)
T ss_pred             CCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHH
Confidence                           0       000  0         001123467889999998642       234555        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                        |+++ |..||.....   ....    .....+......++.+....+    ..+..++..|| .+ ++|||++
T Consensus       199 l~el~~~g~~p~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rpt~~  261 (269)
T cd05087         199 IWELFELGSQPYRHLSD---EQVL----TYTVREQQLKLPKPRLKLPLS----DRWYEVMQFCW-LQPEQRPSAE  261 (269)
T ss_pred             HHHHHhCCCCCCCCCCh---HHHH----HHHhhcccCCCCCCccCCCCC----hHHHHHHHHHh-cCcccCCCHH
Confidence              8886 9999864321   1111    111112222223333322222    23556777999 68 9999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.33  E-value=1.8e-11  Score=95.46  Aligned_cols=147  Identities=16%  Similarity=0.175  Sum_probs=96.1

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ......|.+|++++..++           ...+..++|+||+++|+|..++.+...  .++|..+..++.++        
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH  120 (282)
T cd06643          43 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLH  120 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999988           667789999999999999999876433  58898888888777        


Q ss_pred             ----------------C-------C---------CCccccccccCCcCccCccccc-----cCCCCcce----------e
Q 048710          106 ----------------L-------A---------DQTYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------N  138 (208)
Q Consensus       106 ----------------~-------~---------~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E  138 (208)
                                      .       .         ..........||..|+|||.+.     +..++.++          |
T Consensus       121 ~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~e  200 (282)
T cd06643         121 ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE  200 (282)
T ss_pred             HCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHH
Confidence                            0       0         0001112345789999999974     34455566          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +++|+.|+....      ....+.... ........       .+......+.+++..||+.+ ++||++
T Consensus       201 l~~g~~p~~~~~------~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~  256 (282)
T cd06643         201 MAQIEPPHHELN------PMRVLLKIA-KSEPPTLA-------QPSRWSSEFKDFLKKCLEKNVDARWTT  256 (282)
T ss_pred             HccCCCCccccC------HHHHHHHHh-hcCCCCCC-------CccccCHHHHHHHHHHccCChhhCcCH
Confidence            999999986321      111111111 11111111       11122345667788999999 999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.33  E-value=5.5e-12  Score=99.29  Aligned_cols=142  Identities=14%  Similarity=0.231  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++..++           ...+..++|+||+++|+|.+++.+.    .+++.+...++.++           
T Consensus        61 ~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~g  136 (296)
T cd06654          61 KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ  136 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999887           5567899999999999999999753    47788888877777           


Q ss_pred             -------------C-------CCC---------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -------------L-------ADQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~-------~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                   .       .+.         ........|++.|+|||...+..++.++          |++||+.||
T Consensus       137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf  216 (296)
T cd06654         137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (296)
T ss_pred             cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                         0       000         0011234678899999999888888888          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....+     . .........+ ..     .+  ..+......+.+++.+||+.+ ++||++
T Consensus       217 ~~~~~-----~-~~~~~~~~~~-~~-----~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~  264 (296)
T cd06654         217 LNENP-----L-RALYLIATNG-TP-----EL--QNPEKLSAIFRDFLNRCLDMDVEKRGSA  264 (296)
T ss_pred             CCCCH-----H-HhHHHHhcCC-CC-----CC--CCccccCHHHHHHHHHHCcCCcccCcCH
Confidence            74321     1 1111111111 10     01  111222345667888999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.33  E-value=7.5e-12  Score=99.06  Aligned_cols=98  Identities=19%  Similarity=0.288  Sum_probs=74.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++.+|++++.+++           ...+..++|+||+++|+|.+++++..   .+++.....++.++          
T Consensus        42 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~  118 (308)
T cd06615          42 IRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREK  118 (308)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhh
Confidence            3457899999999987           57789999999999999999998653   46777776666655          


Q ss_pred             ---------------CCCC---------c-----cccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ---------------LADQ---------T-----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------~~~~---------~-----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                     ..+.         .     .......|+..|+|||...+..++.++          |++||+.|+
T Consensus       119 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~  198 (308)
T cd06615         119 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI  198 (308)
T ss_pred             CCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                           0000         0     001234578899999999887788777          999999998


Q ss_pred             C
Q 048710          147 C  147 (208)
Q Consensus       147 ~  147 (208)
                      .
T Consensus       199 ~  199 (308)
T cd06615         199 P  199 (308)
T ss_pred             C
Confidence            6

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.33  E-value=2.9e-12  Score=101.19  Aligned_cols=146  Identities=14%  Similarity=0.251  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~  100 (208)
                      .....|.+|+.++.++ +           ...+..++|+||+++|+|.++++....             ...+++.+...
T Consensus        49 ~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  128 (303)
T cd05088          49 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  128 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHH
Confidence            3456789999999998 3           566789999999999999999975421             12478888888


Q ss_pred             HHHhC------------------------CCCC---------cc------ccccccCCcCccCccccccCCCCcce----
Q 048710          101 IVVDS------------------------LADQ---------TY------MTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       101 i~~~i------------------------~~~~---------~~------~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                      ++.++                        ..+.         ..      ......++..|+|||.+.+..++.++    
T Consensus       129 ~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  208 (303)
T cd05088         129 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS  208 (303)
T ss_pred             HHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchh
Confidence            77776                        0000         00      00111235679999999888888777    


Q ss_pred             ------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                            |++| |..|+.....      .+ .......+.     ..    ..+......+.+++.+||+.+ ++||++
T Consensus       209 lG~il~ellt~g~~p~~~~~~------~~-~~~~~~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~  270 (303)
T cd05088         209 YGVLLWEIVSLGGTPYCGMTC------AE-LYEKLPQGY-----RL----EKPLNCDDEVYDLMRQCWREKPYERPSF  270 (303)
T ss_pred             hhhHHHHHHhcCCCCcccCCh------HH-HHHHHhcCC-----cC----CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence                  9998 9998863211      11 111111110     00    111112234677888999999 999996

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.33  E-value=1.3e-11  Score=95.25  Aligned_cols=143  Identities=17%  Similarity=0.296  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++.+++           .+.+..++|+||+++|+|.+++.+..   .+++.....++.++           
T Consensus        46 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  122 (265)
T cd06631          46 YEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC  122 (265)
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457899999999888           56788999999999999999997643   46677666666555           


Q ss_pred             -------------C-------CCC---------------ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -------------L-------ADQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------~-------~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                   .       .+.               ........|+..|+|||+..+..++.++          |++
T Consensus       123 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~  202 (265)
T cd06631         123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA  202 (265)
T ss_pred             cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHH
Confidence                         0       000               0011234578899999999888888777          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..||....     .... ..........    .+.+...+    ...+.+++.+||+.+ ++||++
T Consensus       203 ~g~~p~~~~~-----~~~~-~~~~~~~~~~----~~~~~~~~----~~~~~~~i~~~l~~~p~~Rp~~  256 (265)
T cd06631         203 TGKPPLASMD-----RLAA-MFYIGAHRGL----MPRLPDSF----SAAAIDFVTSCLTRDQHERPSA  256 (265)
T ss_pred             hCCCccccCC-----hHHH-HHHhhhccCC----CCCCCCCC----CHHHHHHHHHHhcCCcccCCCH
Confidence            9999987321     1111 1111111011    11122222    234566777999999 999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.33  E-value=1.7e-12  Score=100.03  Aligned_cols=143  Identities=14%  Similarity=0.209  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+|.+|+.++.+++           ...+..++|+||+++|+|.+++...... .++|.+...++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          45 PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467999999999988           4557799999999999999999875433 68899888888777           


Q ss_pred             -------------CCCCc-----------------cccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------LADQT-----------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   ..+..                 .......++..|+|||.+.+..++.++          |++| |+.
T Consensus       124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~  203 (261)
T cd05034         124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV  203 (261)
T ss_pred             cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCC
Confidence                         00000                 000112235689999999888888877          8888 899


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ....... ...+ .    ..    ..+...+..+.+++.+||+.+ ++||++
T Consensus       204 p~~~~~------~~~~~~~-~~~~-~----~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         204 PYPGMT------NREVLEQ-VERG-Y----RM----PRPPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             CCCCCC------HHHHHHH-HHcC-C----CC----CCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            986321      1111111 1111 0    00    111122345678888999999 999986

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.33  E-value=9.1e-12  Score=107.03  Aligned_cols=149  Identities=18%  Similarity=0.298  Sum_probs=105.1

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCC---C--C--------CCCCHHHHH
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQN---E--E--------FPIAWEMQL   99 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~---~--~--------~~l~~~~r~   99 (208)
                      +...+.|..|+.+|..+-            ...+..++|.||+++|+|.++|+..+   .  .        ..+.-...+
T Consensus       342 ~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLl  421 (609)
T KOG0200|consen  342 SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLL  421 (609)
T ss_pred             cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHH
Confidence            345678999999999987            55788999999999999999998766   0  0        126667777


Q ss_pred             HHHHhC-------------------------------------C----CCCccccccccC--CcCccCccccccCCCCcc
Q 048710          100 HIVVDS-------------------------------------L----ADQTYMTTQVQG--TFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus       100 ~i~~~i-------------------------------------~----~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~k  136 (208)
                      .++.||                                     .    ...........|  ...|||||.+....|+.|
T Consensus       422 sfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k  501 (609)
T KOG0200|consen  422 SFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK  501 (609)
T ss_pred             HHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc
Confidence            777777                                     0    111111122223  356999999999999999


Q ss_pred             e----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCC
Q 048710          137 S----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKK  204 (208)
Q Consensus       137 s----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~R  204 (208)
                      |          |++| |..||....     .... +.+.+.+|..         .+.|..+..++..+|..||+.+ .+|
T Consensus       502 SDVWSfGI~L~EifsLG~~PYp~~~-----~~~~-l~~~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~R  566 (609)
T KOG0200|consen  502 SDVWSFGILLWEIFTLGGTPYPGIP-----PTEE-LLEFLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDR  566 (609)
T ss_pred             chhhHHHHHHHHHhhCCCCCCCCCC-----cHHH-HHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccC
Confidence            9          9999 899987421     1111 2335555532         2334455667789999999999 999


Q ss_pred             CCCC
Q 048710          205 PTMR  208 (208)
Q Consensus       205 Psm~  208 (208)
                      |+++
T Consensus       567 P~F~  570 (609)
T KOG0200|consen  567 PTFS  570 (609)
T ss_pred             CCHH
Confidence            9973

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.33  E-value=3.2e-12  Score=99.57  Aligned_cols=143  Identities=16%  Similarity=0.279  Sum_probs=95.8

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+|.+|+.++.+++          ...+..++|+||+++|+|.+++.+...  .+++...+.++.++           
T Consensus        52 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T cd05057          52 ANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEKR  129 (279)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567999999999987          334788999999999999999987544  48899888888877           


Q ss_pred             -------------CC-------CC--c---------cccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -------------LA-------DQ--T---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -------------~~-------~~--~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                   ..       +.  .         .......++..|++||......++.++          |++| |+
T Consensus       130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~  209 (279)
T cd05057         130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGA  209 (279)
T ss_pred             EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCC
Confidence                         00       00  0         000112235689999999888888777          8998 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....      ..+ +......+...         ..+......+.+++.+||..+ ++||++
T Consensus       210 ~p~~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~  258 (279)
T cd05057         210 KPYEGIP------AVE-IPDLLEKGERL---------PQPPICTIDVYMVLVKCWMIDAESRPTF  258 (279)
T ss_pred             CCCCCCC------HHH-HHHHHhCCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            9987432      111 22222222110         111112234667888999999 999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.33  E-value=2.4e-12  Score=105.56  Aligned_cols=40  Identities=18%  Similarity=0.443  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcC
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQ   87 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~   87 (208)
                      .+.|.+|+++|.++.            ...+..++|+||+++|+|.++|+..
T Consensus        84 ~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107          84 KQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhc
Confidence            457899999999884            5567899999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.33  E-value=3.1e-12  Score=98.15  Aligned_cols=145  Identities=17%  Similarity=0.248  Sum_probs=99.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC------CCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE------EFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~------~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|++.+..++           ...+..++|+||+++|+|.+++.....      ...+++.....++.++    
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  118 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM  118 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence            3568899999999987           567889999999999999999987521      1268999998888887    


Q ss_pred             --------------------CC---------C---------CccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------LA---------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------~~---------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                          ..         +         .........+++.|+|||.+.+..++.++          
T Consensus       119 ~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  198 (262)
T cd00192         119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW  198 (262)
T ss_pred             HHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHH
Confidence                                00         0         00112234568899999999887788777          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+++ |..|+....      ... +......+..         ...+......+.+++.+||+.+ ++|||+
T Consensus       199 ~l~~~g~~p~~~~~------~~~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  254 (262)
T cd00192         199 EIFTLGATPYPGLS------NEE-VLEYLRKGYR---------LPKPEYCPDELYELMLSCWQLDPEDRPTF  254 (262)
T ss_pred             HHHhcCCCCCCCCC------HHH-HHHHHHcCCC---------CCCCccCChHHHHHHHHHccCCcccCcCH
Confidence            8888 688887431      111 1222222211         0111222446678888999999 999986

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.32  E-value=3e-11  Score=94.39  Aligned_cols=149  Identities=15%  Similarity=0.151  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           ...+..++|+||+++++|.+++........+++.....++.++         
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  120 (286)
T cd06622          41 SKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE  120 (286)
T ss_pred             HHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34568999999999887           5678899999999999999999864322257888777777665         


Q ss_pred             ----------------CCC--------------CccccccccCCcCccCccccccCCC------Ccce----------eE
Q 048710          106 ----------------LAD--------------QTYMTTQVQGTFGYLDLQYFQSSPF------TEKS----------NL  139 (208)
Q Consensus       106 ----------------~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~------~~ks----------E~  139 (208)
                                      ..+              .........|+.+|+|||.+.+...      +.++          |+
T Consensus       121 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l  200 (286)
T cd06622         121 EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM  200 (286)
T ss_pred             cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH
Confidence                            000              0011123457889999999865443      4455          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||+.||....   .......+.. ...+..     +    ..+......+.+++.+||+.+ ++||++
T Consensus       201 ~~g~~pf~~~~---~~~~~~~~~~-~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~  256 (286)
T cd06622         201 ALGRYPYPPET---YANIFAQLSA-IVDGDP-----P----TLPSGYSDDAQDFVAKCLNKIPNRRPTY  256 (286)
T ss_pred             HhCCCCCCCcc---hhhHHHHHHH-HhhcCC-----C----CCCcccCHHHHHHHHHHcccCcccCCCH
Confidence            99999986321   1111111111 111111     1    112223445667888999999 999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.32  E-value=1.2e-11  Score=98.42  Aligned_cols=140  Identities=14%  Similarity=0.156  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++....            .+.+..|+||||+++|+|.+++....   .+++.+...++.++          
T Consensus        39 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~  115 (316)
T cd05620          39 VECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK  115 (316)
T ss_pred             HHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345677777776542            56788999999999999999997643   46777666666555          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       |         .........||..|+|||++.+..++.++          |++||+.|
T Consensus       116 ~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~P  195 (316)
T cd05620         116 GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence                          00       0         01112345689999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....   .   .. +......+.      +.+....    ...+.++...||+.+ ++||++
T Consensus       196 f~~~~---~---~~-~~~~~~~~~------~~~~~~~----~~~~~~li~~~l~~dP~~R~~~  241 (316)
T cd05620         196 FHGDD---E---DE-LFESIRVDT------PHYPRWI----TKESKDILEKLFERDPTRRLGV  241 (316)
T ss_pred             CCCCC---H---HH-HHHHHHhCC------CCCCCCC----CHHHHHHHHHHccCCHHHcCCC
Confidence            97321   1   11 111221111      1111111    224556777999999 999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=4.6e-12  Score=97.62  Aligned_cols=142  Identities=15%  Similarity=0.217  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        48 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~  124 (263)
T cd06625          48 VNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNM  124 (263)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457899999999988           56679999999999999999997643   46677666666655           


Q ss_pred             -------------CCC---------Cc-------cc---cccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------LAD---------QT-------YM---TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~~~---------~~-------~~---~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   ..+         ..       ..   .....|+..|+|||...+..++.++          |+++|+
T Consensus       125 i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  204 (263)
T cd06625         125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK  204 (263)
T ss_pred             eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCC
Confidence                         000         00       00   0224467899999999988888887          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....      .............     .+.+    +......+.++..+||+.+ ++||++
T Consensus       205 ~p~~~~~------~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~  254 (263)
T cd06625         205 PPWAEFE------AMAAIFKIATQPT-----NPQL----PSHVSPDARNFLRRTFVENAKKRPSA  254 (263)
T ss_pred             CCccccc------hHHHHHHHhccCC-----CCCC----CccCCHHHHHHHHHHhhcCcccCCCH
Confidence            9987321      1111111111111     1111    1222334567777999999 999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.32  E-value=8.4e-12  Score=99.23  Aligned_cols=139  Identities=12%  Similarity=0.128  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+..|..++..+ +           .+.+..++||||+++|+|.+++....   .+++.+...++.++           
T Consensus        40 ~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05619          40 ECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSKG  116 (316)
T ss_pred             HHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567777777754 2           66778999999999999999997643   47788777777766           


Q ss_pred             ----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-+       .........||..|+|||++.+..++.++          |++||+.||
T Consensus       117 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf  196 (316)
T cd05619         117 IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence                                  000       01112345689999999999988888888          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ... +......+.      +.+...    ....+.++...||+.+ ++||++
T Consensus       197 ~~~~------~~~-~~~~i~~~~------~~~~~~----~~~~~~~li~~~l~~~P~~R~~~  241 (316)
T cd05619         197 HGHD------EEE-LFQSIRMDN------PCYPRW----LTREAKDILVKLFVREPERRLGV  241 (316)
T ss_pred             CCCC------HHH-HHHHHHhCC------CCCCcc----CCHHHHHHHHHHhccCHhhcCCC
Confidence            7432      111 111121111      111111    1224557777999999 999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.32  E-value=1.7e-11  Score=94.49  Aligned_cols=144  Identities=14%  Similarity=0.103  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..++|+||+++|+|.+++++..   .+++.....++.++           
T Consensus        37 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~  113 (262)
T cd05572          37 QEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG  113 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            467999999999888           56678999999999999999998653   46777777766655           


Q ss_pred             -------------CCC---------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 -------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 -------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                   ..+               .........|+..|++||.+.+..++.++          |+++|..|+.
T Consensus       114 ~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  193 (262)
T cd05572         114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFG  193 (262)
T ss_pred             cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcC
Confidence                         000               00011234578899999999887788777          9999999997


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....    .......... .+..        ....+......+.+++..||+.+ ++||+|
T Consensus       194 ~~~~----~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  241 (262)
T cd05572         194 EDDE----DPMEIYNDIL-KGNG--------KLEFPNYIDKAAKDLIKQLLRRNPEERLGN  241 (262)
T ss_pred             CCCC----CHHHHHHHHh-ccCC--------CCCCCcccCHHHHHHHHHHccCChhhCcCC
Confidence            4321    1111111111 1100        01122222446678888999999 999994

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.32  E-value=3.5e-12  Score=99.82  Aligned_cols=146  Identities=10%  Similarity=0.238  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------------CCCCCCHH
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-------------------EEFPIAWE   96 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------------~~~~l~~~   96 (208)
                      ...+|.+|+.++.+++           ...+..++|+||+++|+|.+++....                   ....+++.
T Consensus        51 ~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  130 (288)
T cd05050          51 MQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT  130 (288)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence            3567999999999987           55677899999999999999997432                   11247788


Q ss_pred             HHHHHHHhC------------------------CC-------CC--c---------cccccccCCcCccCccccccCCCC
Q 048710           97 MQLHIVVDS------------------------LA-------DQ--T---------YMTTQVQGTFGYLDLQYFQSSPFT  134 (208)
Q Consensus        97 ~r~~i~~~i------------------------~~-------~~--~---------~~~~~~~gt~~y~aPE~~~~~~~~  134 (208)
                      .++.++.++                        ..       +.  .         .......+++.|+|||...+..++
T Consensus       131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (288)
T cd05050         131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT  210 (288)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC
Confidence            888888877                        00       00  0         001112235679999999888888


Q ss_pred             cce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-C
Q 048710          135 EKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-E  202 (208)
Q Consensus       135 ~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~  202 (208)
                      .++          |+++ |..|+....      ..+.. ....+++...         .+......+.+++.+||+.+ +
T Consensus       211 ~~~Dv~slG~il~el~~~~~~p~~~~~------~~~~~-~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~  274 (288)
T cd05050         211 TESDVWAYGVVLWEIFSYGMQPYYGMA------HEEVI-YYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPS  274 (288)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHH-HHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcc
Confidence            888          8887 777875321      11112 2222332211         11122345677888999999 9


Q ss_pred             CCCCCC
Q 048710          203 KKPTMR  208 (208)
Q Consensus       203 ~RPsm~  208 (208)
                      +|||+.
T Consensus       275 ~Rpt~~  280 (288)
T cd05050         275 DRPSFA  280 (288)
T ss_pred             cCCCHH
Confidence            999973

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.32  E-value=4e-12  Score=98.96  Aligned_cols=141  Identities=11%  Similarity=0.241  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|..|+.++++++           .+.+..++||||+++|+|..++.+..+  .+++..++.++.++           
T Consensus        60 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~  137 (274)
T cd05076          60 ALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDKN  137 (274)
T ss_pred             HHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            357889999999887           566788999999999999999976443  47888888888877           


Q ss_pred             ------CCCC-----------------------c---cccccccCCcCccCcccccc-CCCCcce----------eE-ec
Q 048710          106 ------LADQ-----------------------T---YMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NL-LT  141 (208)
Q Consensus       106 ------~~~~-----------------------~---~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~-~t  141 (208)
                            .+.+                       .   .......++..|+|||.+.+ ..++.++          |+ ++
T Consensus       138 iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~  217 (274)
T cd05076         138 LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD  217 (274)
T ss_pred             ccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                  0000                       0   00012346789999998865 4566676          76 46


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+.|+......   ..    ........       .+..    .....+.+++.+||+.+ ++||+|.
T Consensus       218 g~~p~~~~~~~---~~----~~~~~~~~-------~~~~----~~~~~~~~li~~cl~~~p~~Rps~~  267 (274)
T cd05076         218 GEVPLKERTPS---EK----ERFYEKKH-------RLPE----PSCKELATLISQCLTYEPTQRPSFR  267 (274)
T ss_pred             CCCCccccChH---HH----HHHHHhcc-------CCCC----CCChHHHHHHHHHcccChhhCcCHH
Confidence            88888643211   11    11111110       0111    11235678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.32  E-value=2.2e-11  Score=97.23  Aligned_cols=145  Identities=15%  Similarity=0.186  Sum_probs=91.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|..|+.++..++           .+.+..++||||+++|+|.+++.+...  .+++.....++.++          
T Consensus        44 ~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~  121 (330)
T cd05601          44 TVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQM  121 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456889999998877           567789999999999999999987533  47777776666555          


Q ss_pred             -----------------------CCC--------CccccccccCCcCccCccccc------cCCCCcce----------e
Q 048710          106 -----------------------LAD--------QTYMTTQVQGTFGYLDLQYFQ------SSPFTEKS----------N  138 (208)
Q Consensus       106 -----------------------~~~--------~~~~~~~~~gt~~y~aPE~~~------~~~~~~ks----------E  138 (208)
                                             +-+        .........||+.|+|||++.      ...++.++          |
T Consensus       122 ~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e  201 (330)
T cd05601         122 GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE  201 (330)
T ss_pred             CeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence                                   000        001112346899999999986      34555666          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||....      .................-+       .......+.++...|++ + ++||++
T Consensus       202 l~~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~li~~ll~-~p~~R~t~  257 (330)
T cd05601         202 MIYGRSPFHEGT------SAKTYNNIMNFQRFLKFPE-------DPKVSSDFLDLIQSLLC-GQKERLGY  257 (330)
T ss_pred             eccCCCCCCCCC------HHHHHHHHHcCCCccCCCC-------CCCCCHHHHHHHHHHcc-ChhhCCCH
Confidence            999999997432      1111222221111111000       01122345566668887 8 999986

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.31  E-value=3.9e-12  Score=100.91  Aligned_cols=146  Identities=13%  Similarity=0.255  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~  100 (208)
                      ....+|.+|+.++.++.            ...+..++|+||+++|+|.+++.....             ...++|.+.++
T Consensus        59 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  138 (314)
T cd05099          59 KDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVS  138 (314)
T ss_pred             HHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHH
Confidence            34567899999998883            456778999999999999999975321             12588888888


Q ss_pred             HHHhC------------------------CCCC---------c---------cccccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS------------------------LADQ---------T---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i------------------------~~~~---------~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      ++.++                        ..+.         .         .......++..|+|||.+.++.++.++ 
T Consensus       139 ~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (314)
T cd05099         139 CAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD  218 (314)
T ss_pred             HHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence            77777                        0000         0         000111234679999999888888887 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |++| |..|+.....       ..+......+...         ..+......+.+++.+||+.+ ++||+
T Consensus       219 iwslG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps  282 (314)
T cd05099         219 VWSFGILMWEIFTLGGSPYPGIPV-------EELFKLLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPT  282 (314)
T ss_pred             hhHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence                     8888 8888763211       1122222222111         111122345667888999999 99998


Q ss_pred             C
Q 048710          207 M  207 (208)
Q Consensus       207 m  207 (208)
                      +
T Consensus       283 ~  283 (314)
T cd05099         283 F  283 (314)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.31  E-value=4.6e-12  Score=97.88  Aligned_cols=141  Identities=18%  Similarity=0.325  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           .+.+..++|+||+++++|.+++....   .+++.....++.++           
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~  126 (267)
T cd06628          50 LDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNRG  126 (267)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcC
Confidence            357899999999988           56788999999999999999997643   47777777766666           


Q ss_pred             -------------CC-------C---------C------ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -------------LA-------D---------Q------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------~~-------~---------~------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                   ..       +         .      ........|+..|+|||.+.+..++.++          |++
T Consensus       127 ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~  206 (267)
T cd06628         127 IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML  206 (267)
T ss_pred             cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh
Confidence                         00       0         0      0001123478899999999888888777          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||+.||....     .. ..+.... ..     ..+.+..    .....+..++.+||+.+ ++||++
T Consensus       207 ~g~~p~~~~~-----~~-~~~~~~~-~~-----~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~  258 (267)
T cd06628         207 TGKHPFPDCT-----QL-QAIFKIG-EN-----ASPEIPS----NISSEAIDFLEKTFEIDHNKRPTA  258 (267)
T ss_pred             hCCCCCCCcc-----HH-HHHHHHh-cc-----CCCcCCc----ccCHHHHHHHHHHccCCchhCcCH
Confidence            9999987421     11 1111111 11     1122211    22334566777999999 999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.31  E-value=8.9e-12  Score=95.61  Aligned_cols=144  Identities=13%  Similarity=0.189  Sum_probs=95.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           .+.+..++|+||+++++|.+++.+..   .+++.....++.++          
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~  121 (258)
T cd06632          45 AVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR  121 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567999999999987           56678999999999999999998643   47788777766655          


Q ss_pred             --------------CC-------C--------CccccccccCCcCccCccccccCC-CCcce----------eEecCCCC
Q 048710          106 --------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~tg~~p  145 (208)
                                    ..       +        .........|+..|++||.+.... ++.++          |+++|+.|
T Consensus       122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~p  201 (258)
T cd06632         122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP  201 (258)
T ss_pred             CcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence                          00       0        000112445788999999987665 66666          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....      -...+...........     +    +......+.++..+||+.+ ++||+++
T Consensus       202 f~~~~------~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rp~~~  250 (258)
T cd06632         202 WSQLE------GVAAVFKIGRSKELPP-----I----PDHLSDEAKDFILKCLQRDPSLRPTAA  250 (258)
T ss_pred             cccCc------HHHHHHHHHhcccCCC-----c----CCCcCHHHHHHHHHHhhcCcccCcCHH
Confidence            87431      1111111111111111     1    1112234567778999999 9999973

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.1e-11  Score=99.62  Aligned_cols=60  Identities=23%  Similarity=0.341  Sum_probs=48.4

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHh
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVD  104 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~  104 (208)
                      .+..+..+.|.+|-.|.+...                 .....+.||+||-++|||.+||..+    .++|....+|+..
T Consensus       240 ifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n----tisw~~~cria~S  315 (534)
T KOG3653|consen  240 IFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAES  315 (534)
T ss_pred             ecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHH
Confidence            556667788999999888655                 2255788999999999999999875    6899988877766


Q ss_pred             C
Q 048710          105 S  105 (208)
Q Consensus       105 i  105 (208)
                      +
T Consensus       316 m  316 (534)
T KOG3653|consen  316 M  316 (534)
T ss_pred             H
Confidence            5

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.31  E-value=1.1e-11  Score=96.05  Aligned_cols=147  Identities=12%  Similarity=0.179  Sum_probs=92.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           ...+..++|+||+++++|.++++........++.....++.++          
T Consensus        48 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  127 (268)
T cd06624          48 YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN  127 (268)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            4567999999999988           5667899999999999999999865332122666666666655          


Q ss_pred             --------------CCCC-----------------ccccccccCCcCccCccccccCC--CCcce----------eEecC
Q 048710          106 --------------LADQ-----------------TYMTTQVQGTFGYLDLQYFQSSP--FTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~--~~~ks----------E~~tg  142 (208)
                                    ..+.                 ........|+..|+|||++.+..  ++.++          |+++|
T Consensus       128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g  207 (268)
T cd06624         128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATG  207 (268)
T ss_pred             CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhC
Confidence                          0000                 00011234788999999986543  56666          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..|+.....   .....+.....  +     ..+.+    +......+.+++.+||+.+ ++|||+
T Consensus       208 ~~p~~~~~~---~~~~~~~~~~~--~-----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~  259 (268)
T cd06624         208 KPPFIELGE---PQAAMFKVGMF--K-----IHPEI----PESLSAEAKNFILRCFEPDPDKRASA  259 (268)
T ss_pred             CCCCccccC---hhhhHhhhhhh--c-----cCCCC----CcccCHHHHHHHHHHcCCCchhCCCH
Confidence            999863211   01111100000  0     01111    2223345667788999999 999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.31  E-value=4e-12  Score=97.71  Aligned_cols=144  Identities=17%  Similarity=0.265  Sum_probs=96.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|+.++.+++           .+.+..++|+||+++|+|.+++...... .++|.....++.++          
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~~  121 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEEK  121 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3568999999999987           5578899999999999999999865432 58899888888877          


Q ss_pred             --------------CCCCc-------------cccccccCCcCccCccccccCCCCcce----------eEec-CCCCCC
Q 048710          106 --------------LADQT-------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPIC  147 (208)
Q Consensus       106 --------------~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~  147 (208)
                                    ..+..             .......++..|+|||++.++.++.++          |+++ |..|+.
T Consensus       122 ~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  201 (256)
T cd05039         122 NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  201 (256)
T ss_pred             CccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence                          00000             000122346789999999888888777          8887 888886


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...       ...+......+..     +..    +......+.+++.+||+.+ ++||++
T Consensus       202 ~~~-------~~~~~~~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~  246 (256)
T cd05039         202 RIP-------LKDVVPHVEKGYR-----MEA----PEGCPPEVYKVMKDCWELDPAKRPTF  246 (256)
T ss_pred             CCC-------HHHHHHHHhcCCC-----CCC----ccCCCHHHHHHHHHHhccChhhCcCH
Confidence            321       1112222222211     111    1112345667888999999 999996

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.31  E-value=1.7e-11  Score=97.47  Aligned_cols=139  Identities=12%  Similarity=0.119  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+..|..++....            ...+..|+||||+++|+|.+++....   .++......++.++           
T Consensus        40 ~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05592          40 ECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG  116 (316)
T ss_pred             HHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            44566666665432            56778999999999999999997643   46666666666655           


Q ss_pred             ----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-+       .........||+.|+|||.+.+..++.++          |+++|+.||
T Consensus       117 ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf  196 (316)
T cd05592         117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCC
Confidence                                  000       01112345689999999999988888887          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....      .. +........      +.+...    ....+.++...||+.+ ++||++
T Consensus       197 ~~~~~------~~-~~~~i~~~~------~~~~~~----~~~~~~~ll~~~l~~~P~~R~~~  241 (316)
T cd05592         197 HGEDE------DE-LFDSILNDR------PHFPRW----ISKEAKDCLSKLFERDPTKRLGV  241 (316)
T ss_pred             CCCCH------HH-HHHHHHcCC------CCCCCC----CCHHHHHHHHHHccCCHHHcCCC
Confidence            74321      11 111111110      111111    2234456777999999 999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.31  E-value=2.8e-12  Score=107.86  Aligned_cols=147  Identities=15%  Similarity=0.224  Sum_probs=95.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cC------CCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHh
Q 048710           45 EGKVNKLINEVVILSQIN-------------LE------TEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVD  104 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~------~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~  104 (208)
                      ......+.+|+.++..++             ..      ....++||||+++|+|.++|+... ....+++.....++.+
T Consensus        72 ~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~q  151 (496)
T PTZ00283         72 EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQ  151 (496)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHH
Confidence            444567889999998765             00      113689999999999999997532 2225777776666665


Q ss_pred             C------------------------CC---------C---------CccccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S------------------------LA---------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i------------------------~~---------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                        ..         +         .........||+.|+|||.+.+..++.++     
T Consensus       152 ll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSl  231 (496)
T PTZ00283        152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSL  231 (496)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHH
Confidence            5                        00         0         00112345689999999999988888888     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++||+.||....      ....+.... .+...    + +    +......+.+++..||+.+ ++||++
T Consensus       232 GvilyeLltG~~Pf~~~~------~~~~~~~~~-~~~~~----~-~----~~~~~~~l~~li~~~L~~dP~~RPs~  291 (496)
T PTZ00283        232 GVLLYELLTLKRPFDGEN------MEEVMHKTL-AGRYD----P-L----PPSISPEMQEIVTALLSSDPKRRPSS  291 (496)
T ss_pred             HHHHHHHHHCCCCCCCCC------HHHHHHHHh-cCCCC----C-C----CCCCCHHHHHHHHHHcccChhhCcCH
Confidence                 9999999987321      222222222 22111    0 1    1122345667888999999 999996

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.30  E-value=6e-12  Score=96.38  Aligned_cols=143  Identities=14%  Similarity=0.253  Sum_probs=93.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++.+++           .+.+..++|+||+++++|.+++.+...  .+++...+.++.++          
T Consensus        35 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~  112 (251)
T cd05041          35 LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK  112 (251)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4467999999999887           666788999999999999999976433  47787777766655          


Q ss_pred             --------------CC-------C--C-------cccc--ccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------LA-------D--Q-------TYMT--TQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------~~-------~--~-------~~~~--~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                    ..       +  .       ....  ....++..|+|||.+.++.++.++          |++| |
T Consensus       113 ~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~  192 (251)
T cd05041         113 NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLG  192 (251)
T ss_pred             CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhcc
Confidence                          00       0  0       0000  111225679999999888888888          8998 7


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..|+.....      .. .......+.         ....+...+..+.+++.+||+.+ ++||++
T Consensus       193 ~~p~~~~~~------~~-~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  242 (251)
T cd05041         193 DTPYPGMSN------QQ-TRERIESGY---------RMPAPQLCPEEIYRLMLQCWAYDPENRPSF  242 (251)
T ss_pred             CCCCccCCH------HH-HHHHHhcCC---------CCCCCccCCHHHHHHHHHHhccChhhCcCH
Confidence            888763211      11 111111110         01112223446778888999999 999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.30  E-value=7.8e-12  Score=98.45  Aligned_cols=142  Identities=14%  Similarity=0.248  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++..++           ...+..++|+||+++|+|.+++.+.    .++|.++..++.++           
T Consensus        60 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          60 KELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             HHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457889999999987           5678899999999999999999753    47899888887766           


Q ss_pred             -------------C-------CC---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                   .       .+         .........|+..|+|||.+.+..++.++          |++||+.||
T Consensus       136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf  215 (296)
T cd06655         136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (296)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                         0       00         00011234578899999999888888887          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....      ........ ........       .+......+.+++.+||+.+ ++||++
T Consensus       216 ~~~~~------~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rpt~  263 (296)
T cd06655         216 LNENP------LRALYLIA-TNGTPELQ-------NPEKLSPIFRDFLNRCLEMDVEKRGSA  263 (296)
T ss_pred             CCCCH------HHHHHHHH-hcCCcccC-------CcccCCHHHHHHHHHHhhcChhhCCCH
Confidence            74321      11111111 11111100       11122234567778999999 999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.30  E-value=1.1e-11  Score=97.97  Aligned_cols=147  Identities=14%  Similarity=0.165  Sum_probs=104.9

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhh-----cCCCCCCCCHHHHHHHHHhC--
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYIN-----NQNEEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~-----~~~~~~~l~~~~r~~i~~~i--  105 (208)
                      +-+...|+.|--.+..+.            .+.+.++.+|.++.-|+|+.||.     +.+....++-.+.+.++.|+  
T Consensus       328 ~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~  407 (563)
T KOG1024|consen  328 QIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAM  407 (563)
T ss_pred             HHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHH
Confidence            334556777777776665            67788999999999999999998     44444456667777777777  


Q ss_pred             -----------------------------------CCC----Cccc-cccccCCcCccCccccccCCCCcce--------
Q 048710          106 -----------------------------------LAD----QTYM-TTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 -----------------------------------~~~----~~~~-~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                                                         ..|    ..+. ...-..+..||+||.++...|+..|        
T Consensus       408 am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVl  487 (563)
T KOG1024|consen  408 AMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVL  487 (563)
T ss_pred             HHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHH
Confidence                                               111    1111 1122346899999999999999998        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++| |+.||....+       ..+..++.+|.         +..+|-+++.++..+|..||+.. .+||++
T Consensus       488 lWELmtlg~~PyaeIDP-------fEm~~ylkdGy---------RlaQP~NCPDeLf~vMacCWallpeeRPsf  545 (563)
T KOG1024|consen  488 LWELMTLGKLPYAEIDP-------FEMEHYLKDGY---------RLAQPFNCPDELFTVMACCWALLPEERPSF  545 (563)
T ss_pred             HHHHHhcCCCCccccCH-------HHHHHHHhccc---------eecCCCCCcHHHHHHHHHHHhcCcccCCCH
Confidence              8888 9999984322       23444555552         12345577888999999999999 999996

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.30  E-value=9.6e-12  Score=96.23  Aligned_cols=99  Identities=16%  Similarity=0.255  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.+|+.++.+++             ...+..++++||+++++|.+++.+..   .+++.....++.++        
T Consensus        47 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH  123 (266)
T cd06651          47 EVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLH  123 (266)
T ss_pred             HHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999997             22467889999999999999998643   47777777777766        


Q ss_pred             ----------------C-------CC--Cc----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------L-------AD--QT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~-------~~--~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      .       .+  ..          .......|+.+|+|||.+.+..++.++          |++
T Consensus       124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~  203 (266)
T cd06651         124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML  203 (266)
T ss_pred             hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence                            0       00  00          001124478899999999888888777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       204 ~g~~pf~~  211 (266)
T cd06651         204 TEKPPWAE  211 (266)
T ss_pred             HCCCCccc
Confidence            99999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.30  E-value=5.3e-12  Score=98.34  Aligned_cols=144  Identities=16%  Similarity=0.279  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .....|.+|+.++..++          ......++++||+++|+|.++++....  .+++...+.++.++          
T Consensus        51 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~  128 (279)
T cd05109          51 KANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV  128 (279)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999887          334567899999999999999986543  48888888888887          


Q ss_pred             --------------CC-------CC--c---------cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------LA-------DQ--T---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------~~-------~~--~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                    ..       +.  .         .......++..|++||...+..++.++          |++| |
T Consensus       129 ~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g  208 (279)
T cd05109         129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFG  208 (279)
T ss_pred             CeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence                          00       00  0         001112345789999999888888888          8888 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..|+....   ...+.    .....+...         ..+......+.+++..||+.+ ++||++
T Consensus       209 ~~p~~~~~---~~~~~----~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rp~~  258 (279)
T cd05109         209 AKPYDGIP---AREIP----DLLEKGERL---------PQPPICTIDVYMIMVKCWMIDSECRPRF  258 (279)
T ss_pred             CCCCCCCC---HHHHH----HHHHCCCcC---------CCCccCCHHHHHHHHHHcCCChhhCcCH
Confidence            88886321   11111    122222111         111122345678888999999 999997

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.30  E-value=1.3e-11  Score=95.45  Aligned_cols=148  Identities=20%  Similarity=0.293  Sum_probs=95.7

Q ss_pred             hhhHHHHHHHHHHHhh-cc-----------cCCCeEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQ-IN-----------LETEVLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~-l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i------  105 (208)
                      +....++..|+.++.+ ++           ...+..++||||+++++|.+++... .....+++....+++.++      
T Consensus        49 ~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  128 (269)
T cd08528          49 DKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRY  128 (269)
T ss_pred             hHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence            3445678899998875 33           6678899999999999999998542 112257777777777665      


Q ss_pred             ----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                                        ............|+..|++||...+..++.++          |+++
T Consensus       129 lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~  208 (269)
T cd08528         129 LHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT  208 (269)
T ss_pred             hccCCceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence                                              00000011245588999999999988888887          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.|+....      ....... ..++......+    .    .....+.+++.+||+.+ ++||+|
T Consensus       209 g~~p~~~~~------~~~~~~~-~~~~~~~~~~~----~----~~~~~l~~li~~cl~~~p~~Rp~~  260 (269)
T cd08528         209 LQPPFYSTN------MLSLATK-IVEAVYEPLPE----G----MYSEDVTDVITSCLTPDAEARPDI  260 (269)
T ss_pred             CCCcccccC------HHHHHHH-HhhccCCcCCc----c----cCCHHHHHHHHHHCCCCCccCCCH
Confidence            999986321      1111111 11221111100    0    11234567777999999 999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.30  E-value=4.6e-12  Score=101.36  Aligned_cols=146  Identities=16%  Similarity=0.282  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~  100 (208)
                      ....+|.+|+.++.++ +           ...+..++|+||+++|+|.++|....             ....++|.++++
T Consensus        59 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  138 (334)
T cd05100          59 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVS  138 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHH
Confidence            3456899999999998 3           55667899999999999999997532             112578888888


Q ss_pred             HHHhC------------------------C-------CC--Cc---------cccccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS------------------------L-------AD--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i------------------------~-------~~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      ++.++                        .       .+  ..         .......++..|+|||.+.+..++.++ 
T Consensus       139 ~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         139 CAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             HHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            88777                        0       00  00         001112235679999999888888877 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |+++ |..|+....      ..... .....+...         +.+......+.+++.+||+.+ .+||+
T Consensus       219 i~slG~il~el~~~g~~p~~~~~------~~~~~-~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps  282 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIP------VEELF-KLLKEGHRM---------DKPANCTHELYMIMRECWHAVPSQRPT  282 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCC------HHHHH-HHHHcCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcC
Confidence                     8888 788876321      11111 122222111         111122345678888999999 99999


Q ss_pred             C
Q 048710          207 M  207 (208)
Q Consensus       207 m  207 (208)
                      |
T Consensus       283 ~  283 (334)
T cd05100         283 F  283 (334)
T ss_pred             H
Confidence            7

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.30  E-value=2e-11  Score=95.39  Aligned_cols=98  Identities=13%  Similarity=0.116  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++||||++++++..+.....   .+++.....++.++           
T Consensus        44 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          44 KETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPN---GVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             hhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457889999999987           66788999999999988876554322   47777777777666           


Q ss_pred             -------------CC---------C--------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -------------LA---------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~---------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                   ..         +        .........||..|+|||++.+..++.++          |+++|+.|
T Consensus       121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~p  200 (287)
T cd07848         121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL  200 (287)
T ss_pred             eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCC
Confidence                         00         0        00111234689999999999888888877          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       201 f~~  203 (287)
T cd07848         201 FPG  203 (287)
T ss_pred             CCC
Confidence            974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=2.4e-11  Score=100.35  Aligned_cols=144  Identities=15%  Similarity=0.223  Sum_probs=100.7

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....+...+|+++-++|+           .+.++.|||.|+|++|+|..++... +  .++....-.++.||       
T Consensus        58 k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krr-k--~ltEpEary~l~QIv~GlkYL  134 (592)
T KOG0575|consen   58 KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRR-K--PLTEPEARYFLRQIVEGLKYL  134 (592)
T ss_pred             CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhc-C--CCCcHHHHHHHHHHHHHHHHH
Confidence            3445577899999999999           8999999999999999999999843 2  58887776666666       


Q ss_pred             ---------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ---------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                                       .......-.+.+||+-|+|||++.....+..+          -+++|
T Consensus       135 H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G  214 (592)
T KOG0575|consen  135 HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVG  214 (592)
T ss_pred             HhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhC
Confidence                                             11122333478899999999999977777777          78999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....      + ......+...+-      .+    |........+|+..-++.+ .+|||.
T Consensus       215 ~PPFetk~------v-kety~~Ik~~~Y------~~----P~~ls~~A~dLI~~lL~~~P~~Rpsl  263 (592)
T KOG0575|consen  215 RPPFETKT------V-KETYNKIKLNEY------SM----PSHLSAEAKDLIRKLLRPNPSERPSL  263 (592)
T ss_pred             CCCcccch------H-HHHHHHHHhcCc------cc----ccccCHHHHHHHHHHhcCCcccCCCH
Confidence            99998432      1 112222322211      11    1122223346666999999 999985

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.30  E-value=5.3e-11  Score=93.18  Aligned_cols=156  Identities=13%  Similarity=0.111  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-------  105 (208)
                      ...+|.+|++++++++             ...+.+++||||+++|+|.+++.... ....+++.....++.++       
T Consensus        42 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l  121 (287)
T cd06621          42 LQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL  121 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3467999999999988             23457899999999999999876421 12257777777777776       


Q ss_pred             -----------------CCC--------------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 -----------------LAD--------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -----------------~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                       ..+              .........++..|++||.+.+..++.++          |++||..
T Consensus       122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  201 (287)
T cd06621         122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRF  201 (287)
T ss_pred             HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                             000              00001233468899999999888888877          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+...... .....+.. ..........+ +....  ........+.+++.+||+.+ ++||||
T Consensus       202 p~~~~~~~-~~~~~~~~-~~~~~~~~~~~-~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~  260 (287)
T cd06621         202 PFPPEGEP-PLGPIELL-SYIVNMPNPEL-KDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTP  260 (287)
T ss_pred             CCCcccCC-CCChHHHH-HHHhcCCchhh-ccCCC--CCCchHHHHHHHHHHHcCCCcccCCCH
Confidence            98744221 11111211 11111111111 11110  00112345678888999999 999997

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.30  E-value=7.1e-12  Score=97.12  Aligned_cols=145  Identities=18%  Similarity=0.235  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHhhcc------------c------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           47 KVNKLINEVVILSQIN------------L------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ....+.+|+.++.++.            .      ..+..|+||||+++|+|.+++...... .++|.....++.++   
T Consensus        45 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~  123 (272)
T cd06637          45 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRG  123 (272)
T ss_pred             cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHH
Confidence            3457889999998873            1      135689999999999999999865432 58888887777766   


Q ss_pred             ---------------------C-------CC---------CccccccccCCcCccCcccccc-----CCCCcce------
Q 048710          106 ---------------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS------  137 (208)
Q Consensus       106 ---------------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks------  137 (208)
                                           .       .+         .........|+..|+|||++.+     ..++.++      
T Consensus       124 l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  203 (272)
T cd06637         124 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  203 (272)
T ss_pred             HHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence                                 0       00         0011223467899999999863     3455556      


Q ss_pred             ----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |+++|+.|+.....     .... .... ........+        ......+.+++.+||+.+ ++|||+
T Consensus       204 v~l~el~~g~~p~~~~~~-----~~~~-~~~~-~~~~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~  263 (272)
T cd06637         204 ITAIEMAEGAPPLCDMHP-----MRAL-FLIP-RNPAPRLKS--------KKWSKKFQSFIESCLVKNHSQRPTT  263 (272)
T ss_pred             HHHHHHHhCCCCccccCH-----HHHH-HHHh-cCCCCCCCC--------CCcCHHHHHHHHHHcCCChhhCCCH
Confidence                99999999863211     1111 1111 111111111        112235667888999999 999996

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.30  E-value=1.4e-11  Score=95.54  Aligned_cols=147  Identities=16%  Similarity=0.263  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           ...+..++|+||+++|+|.+++++..   .+++.....++.++           
T Consensus        52 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~  128 (272)
T cd06629          52 VKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKG  128 (272)
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            357889999999987           56678899999999999999998753   57888777666666           


Q ss_pred             -------------CCC---------C---------ccccccccCCcCccCccccccCC--CCcce----------eEecC
Q 048710          106 -------------LAD---------Q---------TYMTTQVQGTFGYLDLQYFQSSP--FTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------~~~---------~---------~~~~~~~~gt~~y~aPE~~~~~~--~~~ks----------E~~tg  142 (208)
                                   ..+         .         ........|+..|+|||......  ++.++          |+++|
T Consensus       129 i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g  208 (272)
T cd06629         129 ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG  208 (272)
T ss_pred             eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence                         000         0         00112345788999999987644  66666          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ..|+....     .. ....... .......+++.+.    ......+.+++..||+.+ ++||+|.
T Consensus       209 ~~p~~~~~-----~~-~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~  264 (272)
T cd06629         209 RRPWSDEE-----AI-AAMFKLG-NKRSAPPIPPDVS----MNLSPVALDFLNACFTINPDNRPTAR  264 (272)
T ss_pred             CCCCcCcc-----hH-HHHHHhh-ccccCCcCCcccc----ccCCHHHHHHHHHHhcCChhhCCCHH
Confidence            99986321     11 1111111 1111111122111    123346667788999999 9999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.29  E-value=8.2e-12  Score=96.05  Aligned_cols=148  Identities=21%  Similarity=0.282  Sum_probs=97.7

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-----
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-----  105 (208)
                      ......+.+|++++++++             ......++++||+++|+|.+++.... ....+++.....++.++     
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~  119 (265)
T cd08217          40 EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALY  119 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHH
Confidence            344567899999999988             23456899999999999999997531 12257887776665554     


Q ss_pred             --C-----CC---------------------------------CccccccccCCcCccCccccccCCCCcce--------
Q 048710          106 --L-----AD---------------------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 --~-----~~---------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                        .     ..                                 .........|+..|++||.+.+..++.++        
T Consensus       120 ~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i  199 (265)
T cd08217         120 ECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL  199 (265)
T ss_pred             HHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence              0     00                                 00001234578999999999888787777        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                        |+++|..|+....      .. .+......+...         ..+......+.+++..|++.+ ++||++.
T Consensus       200 l~~l~~g~~p~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~  257 (265)
T cd08217         200 IYELCALSPPFTARN------QL-QLASKIKEGKFR---------RIPYRYSSELNEVIKSMLNVDPDKRPSTE  257 (265)
T ss_pred             HHHHHHCCCcccCcC------HH-HHHHHHhcCCCC---------CCccccCHHHHHHHHHHccCCcccCCCHH
Confidence              9999999987432      11 122222222221         112223345678888999999 9999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=1.9e-11  Score=95.21  Aligned_cols=147  Identities=16%  Similarity=0.201  Sum_probs=96.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|..|++++.+++           ...+..++||||+++|+|.+++.+...  .+++.....++.++        
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh  120 (280)
T cd06611          43 EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLH  120 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999998           667889999999999999999986543  58888888877776        


Q ss_pred             ----------------C-------CC---------CccccccccCCcCccCcccccc-----CCCCcce----------e
Q 048710          106 ----------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS----------N  138 (208)
Q Consensus       106 ----------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks----------E  138 (208)
                                      .       .+         .........||..|++||.+..     ..++.++          |
T Consensus       121 ~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~  200 (280)
T cd06611         121 SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE  200 (280)
T ss_pred             HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence                            0       00         0001123357899999999752     3455556          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +++|+.|+.....      ...+.. ...+....     +  ..+......+.+++..||+.+ ++||++
T Consensus       201 l~~g~~p~~~~~~------~~~~~~-~~~~~~~~-----~--~~~~~~~~~~~~li~~~l~~~p~~Rps~  256 (280)
T cd06611         201 LAQMEPPHHELNP------MRVLLK-ILKSEPPT-----L--DQPSKWSSSFNDFLKSCLVKDPDDRPTA  256 (280)
T ss_pred             HHhCCCCcccCCH------HHHHHH-HhcCCCCC-----c--CCcccCCHHHHHHHHHHhccChhhCcCH
Confidence            9999999874311      111111 11221111     1  011122234567788999999 999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.29  E-value=2.8e-11  Score=94.35  Aligned_cols=147  Identities=14%  Similarity=0.197  Sum_probs=91.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+|.+|++++.+++           ...+..++|+||+++|+|..+.       .+++.....++.++         
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~  113 (279)
T cd06619          41 ELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS  113 (279)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH
Confidence            34567999999999887           5667889999999999997653       24555555555555         


Q ss_pred             ------------------------CCC-----CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ------------------------LAD-----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                              .-+     .........||..|+|||++.+..++.++          |++||+.||
T Consensus       114 ~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf  193 (279)
T cd06619         114 LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPY  193 (279)
T ss_pred             CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCc
Confidence                                    000     01112345689999999999988888888          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .......................     .+.+...   .....+.+++.+||+.+ .+||++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~li~~~l~~~P~~Rp~~  247 (279)
T cd06619         194 PQIQKNQGSLMPLQLLQCIVDED-----PPVLPVG---QFSEKFVHFITQCMRKQPKERPAP  247 (279)
T ss_pred             hhhcccccccchHHHHHHHhccC-----CCCCCCC---cCCHHHHHHHHHHhhCChhhCCCH
Confidence            74322111111111111111111     1111111   11234567788999999 999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.29  E-value=3.1e-11  Score=94.32  Aligned_cols=150  Identities=19%  Similarity=0.280  Sum_probs=94.6

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|+.++.+++             .+.+..++|+||+++|+|.+++.+...  .++|..+..++.++        
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH  126 (284)
T cd05079          49 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLG  126 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            3467999999999988             123668999999999999999976433  58899888888877        


Q ss_pred             ----------------CC-------C--Cc----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------LA-------D--QT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~~-------~--~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      ..       +  ..          .......|+..|+|||+..+..++.++          |++
T Consensus       127 ~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ell  206 (284)
T cd05079         127 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL  206 (284)
T ss_pred             HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhh
Confidence                            00       0  00          001123456789999999888888877          888


Q ss_pred             cCCCCCCCCCc--------cCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTY--------EENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+..|......        ................+...         +.+......+.+++.+||+.+ ++||++
T Consensus       207 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~  273 (284)
T cd05079         207 TYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL---------PRPPNCPEEVYQLMRKCWEFQPSKRTTF  273 (284)
T ss_pred             cCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC---------CCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            87665431100        00000111111112122111         111123346778888999999 999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.28  E-value=1.4e-11  Score=98.16  Aligned_cols=125  Identities=13%  Similarity=0.201  Sum_probs=83.3

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CC-----------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LA-----------  107 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~-----------  107 (208)
                      .+.+..++||||+++|+|.+++....   .+++.....++.++                        ..           
T Consensus        66 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~  142 (323)
T cd05575          66 QTADKLYFVLDYVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGL  142 (323)
T ss_pred             EeCCEEEEEEcCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCC
Confidence            56788999999999999999997643   46777766666665                        00           


Q ss_pred             -----CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccc
Q 048710          108 -----DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFE  172 (208)
Q Consensus       108 -----~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  172 (208)
                           ..........||+.|+|||++.+..++.++          |++||..||....      ......... .+..  
T Consensus       143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~-~~~~--  213 (323)
T cd05575         143 CKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------TAEMYDNIL-NKPL--  213 (323)
T ss_pred             CcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC------HHHHHHHHH-cCCC--
Confidence                 011112345689999999999988888877          9999999987431      111112111 2211  


Q ss_pred             cccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          173 IFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       173 ~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          .+....    ...+.++..+|++.+ .+||+.
T Consensus       214 ----~~~~~~----~~~~~~li~~~l~~~p~~R~~~  241 (323)
T cd05575         214 ----RLKPNI----SVSARHLLEGLLQKDRTKRLGA  241 (323)
T ss_pred             ----CCCCCC----CHHHHHHHHHHhhcCHHhCCCC
Confidence                111111    234567777999999 999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.27  E-value=6.7e-12  Score=98.30  Aligned_cols=144  Identities=15%  Similarity=0.247  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------CCCCCHHHHHHHHHhC----
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------EFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------~~~l~~~~r~~i~~~i----  105 (208)
                      ...|.+|+.++.+++           ...+..++||||+++|+|.+++.+...       ...+++....+++.++    
T Consensus        53 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (288)
T cd05061          53 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM  132 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            346889999999887           666788999999999999999975321       1245666666666665    


Q ss_pred             --------------------CC-------CCc-----------cccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------LA-------DQT-----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------~~-------~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                          ..       +..           .......++..|+|||...++.++.++          
T Consensus       133 ~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~  212 (288)
T cd05061         133 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW  212 (288)
T ss_pred             HHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHH
Confidence                                00       000           000112346689999999888888888          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+++ |..|+.....      .. +......+....         .+......+.+++.+||+.+ ++|||+
T Consensus       213 el~~~~~~p~~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~  268 (288)
T cd05061         213 EITSLAEQPYQGLSN------EQ-VLKFVMDGGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTF  268 (288)
T ss_pred             HHHhCCCCCCCCCCH------HH-HHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            8888 7878763211      11 222222222111         11122346778888999999 999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.27  E-value=2.3e-11  Score=95.60  Aligned_cols=154  Identities=16%  Similarity=0.283  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--------CCCCCHHHHHHHHHhC-
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--------EFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--------~~~l~~~~r~~i~~~i-  105 (208)
                      ....+|.+|+.++.+++           ...+..++|+||+++|+|.+++.+...        ...++|.+...++.++ 
T Consensus        61 ~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  140 (296)
T cd05095          61 NARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIA  140 (296)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHH
Confidence            34568999999999998           566778999999999999999986431        1146777787777776 


Q ss_pred             -----------------------C-------CC--Cccc---------cccccCCcCccCccccccCCCCcce-------
Q 048710          106 -----------------------L-------AD--QTYM---------TTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -----------------------~-------~~--~~~~---------~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                             .       .+  .+..         .....++..|++||...++.++.++       
T Consensus       141 ~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~  220 (296)
T cd05095         141 SGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGV  220 (296)
T ss_pred             HHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHH
Confidence                                   0       00  0000         0112235789999998888888887       


Q ss_pred             ---eEec--CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ---NLLT--KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ---E~~t--g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                         |++|  |..|+.....   ................. ...     ..+..+...+.+++.+||+.+ ++||+|.
T Consensus       221 ~l~el~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  288 (296)
T cd05095         221 TLWEILTLCKEQPYSQLSD---EQVIENTGEFFRDQGRQ-VYL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQ  288 (296)
T ss_pred             HHHHHHHhCCCCCccccCh---HHHHHHHHHHHhhcccc-ccC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence               8887  6777763221   11111111111111000 000     111123356778888999999 9999973

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.27  E-value=1.3e-11  Score=96.46  Aligned_cols=145  Identities=16%  Similarity=0.226  Sum_probs=98.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++.+++           ...+..++|+||+++++|.+++....  ..+++..+..++.++          
T Consensus        58 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~  135 (286)
T cd06614          58 NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ  135 (286)
T ss_pred             hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3567899999999987           56688999999999999999998754  258999988888877          


Q ss_pred             --------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+                .........|+..|++||.+.+..++.++          |++||+.|
T Consensus       136 gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p  215 (286)
T cd06614         136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP  215 (286)
T ss_pred             CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence                          000                00011223467899999999888888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +....+     . ....... ........+       +......+..++.+||+.+ ++||++
T Consensus       216 ~~~~~~-----~-~~~~~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~  264 (286)
T cd06614         216 YLREPP-----L-RALFLIT-TKGIPPLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSA  264 (286)
T ss_pred             CCCCCH-----H-HHHHHHH-hcCCCCCcc-------hhhCCHHHHHHHHHHhccChhhCcCH
Confidence            873221     1 1111111 111111111       1112345667888999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.27  E-value=2.5e-11  Score=96.86  Aligned_cols=100  Identities=17%  Similarity=0.177  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++..++           ...+..++|+||+++|+|.+++...... .+++.....++.++           
T Consensus        43 ~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          43 VTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD-GMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456778999999887           6678899999999999999999754322 58888888888776           


Q ss_pred             -------------CCCCc------------------c-----ccccccCCcCccCcccccc--CCCCcce----------
Q 048710          106 -------------LADQT------------------Y-----MTTQVQGTFGYLDLQYFQS--SPFTEKS----------  137 (208)
Q Consensus       106 -------------~~~~~------------------~-----~~~~~~gt~~y~aPE~~~~--~~~~~ks----------  137 (208)
                                   ..+..                  .     ......++..|+|||++.+  ..++.++          
T Consensus       122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~  201 (327)
T cd08227         122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  201 (327)
T ss_pred             EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence                         00000                  0     0011235678999999975  4577777          


Q ss_pred             eEecCCCCCCC
Q 048710          138 NLLTKEKPICL  148 (208)
Q Consensus       138 E~~tg~~p~~~  148 (208)
                      |++||+.||..
T Consensus       202 el~~g~~pf~~  212 (327)
T cd08227         202 ELANGHVPFKD  212 (327)
T ss_pred             HHHHCCCCCCC
Confidence            99999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.26  E-value=1.9e-11  Score=97.55  Aligned_cols=139  Identities=14%  Similarity=0.240  Sum_probs=90.4

Q ss_pred             HHHHHHHHH-Hhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVI-LSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~-l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+..|..+ +..++           ...+..|+||||+++|+|..++....   .+++.....++.++           
T Consensus        40 ~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~g  116 (325)
T cd05604          40 KHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSIN  116 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345556554 44454           66788999999999999999997543   47777777776666           


Q ss_pred             ----------------------CC-------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LA-------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-       ..........||..|+|||++.+..++.++          |+++|..||
T Consensus       117 ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf  196 (325)
T cd05604         117 IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPF  196 (325)
T ss_pred             eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCC
Confidence                                  00       011112345689999999999988888887          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ...... ....+.+      .+...    ....+.++...|++.+ .+||++
T Consensus       197 ~~~~------~~~~~~-~~~~~~~------~~~~~----~~~~~~~ll~~ll~~~p~~R~~~  241 (325)
T cd05604         197 YCRD------VAEMYD-NILHKPL------VLRPG----ASLTAWSILEELLEKDRQRRLGA  241 (325)
T ss_pred             CCCC------HHHHHH-HHHcCCc------cCCCC----CCHHHHHHHHHHhccCHHhcCCC
Confidence            7421      111112 1212211      11111    1234556777999999 999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2e-11  Score=94.85  Aligned_cols=143  Identities=15%  Similarity=0.230  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHhhcc--------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           46 GKVNKLINEVVILSQIN--------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~--------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....++.+|+.++.+++              ...+..++||||+++++|.++++..    .+++.....++.++      
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~  116 (277)
T cd06917          41 DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKY  116 (277)
T ss_pred             hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHH
Confidence            34567889999988874              5667789999999999999998753    57888888777766      


Q ss_pred             ------------------C----------------CCCccccccccCCcCccCccccccC-CCCcce----------eEe
Q 048710          106 ------------------L----------------ADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLL  140 (208)
Q Consensus       106 ------------------~----------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~  140 (208)
                                        .                ...........|+..|+|||.+.++ .++.++          |++
T Consensus       117 lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll  196 (277)
T cd06917         117 IHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA  196 (277)
T ss_pred             HHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHH
Confidence                              0                0001111234578899999998753 456666          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +|..|+.....      ..... .....     ..+.+...   .....+.+++.+||+.+ ++||++
T Consensus       197 ~g~~p~~~~~~------~~~~~-~~~~~-----~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~  249 (277)
T cd06917         197 TGNPPYSDVDA------FRAMM-LIPKS-----KPPRLEDN---GYSKLLREFVAACLDEEPKERLSA  249 (277)
T ss_pred             hCCCCCCCCCh------hhhhh-ccccC-----CCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCH
Confidence            99999874321      11111 11111     11222111   12345667888999999 999986

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.26  E-value=1.3e-11  Score=99.28  Aligned_cols=39  Identities=26%  Similarity=0.438  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           48 VNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ...+.+|+.++.++.             ...+..++|+||+++|+|.++++.
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          54 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             HHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHh
Confidence            457889999999984             234567899999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.26  E-value=3.4e-11  Score=94.62  Aligned_cols=142  Identities=13%  Similarity=0.230  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           ...+..++|+||+++|+|.+++.+.    .+++..+..++.++           
T Consensus        60 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g  135 (293)
T cd06647          60 KELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ  135 (293)
T ss_pred             HHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457899999999887           4567899999999999999999753    47788887777766           


Q ss_pred             -------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                   ..       +         .........|++.|++||...+..++.++          |+++|+.||
T Consensus       136 i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf  215 (293)
T cd06647         136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (293)
T ss_pred             EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                         00       0         00011223578889999999887787777          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ........      +......+.      +..  ..+......+.+++.+||+.+ ++||++
T Consensus       216 ~~~~~~~~------~~~~~~~~~------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~  263 (293)
T cd06647         216 LNENPLRA------LYLIATNGT------PEL--QNPEKLSAIFRDFLNRCLEMDVEKRGSA  263 (293)
T ss_pred             CCCChhhh------eeehhcCCC------CCC--CCccccCHHHHHHHHHHccCChhhCcCH
Confidence            74321110      000010110      000  011122334667778999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.26  E-value=1.6e-11  Score=94.99  Aligned_cols=141  Identities=12%  Similarity=0.242  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|..|+.++..++           ......++|+||+++|+|..+++....  .+++..+.+++.++           
T Consensus        48 ~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          48 SLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            347889999999887           566778999999999999999976543  47888888888777           


Q ss_pred             -------------CCCCc-------------------cccccccCCcCccCccccc-cCCCCcce----------eEe-c
Q 048710          106 -------------LADQT-------------------YMTTQVQGTFGYLDLQYFQ-SSPFTEKS----------NLL-T  141 (208)
Q Consensus       106 -------------~~~~~-------------------~~~~~~~gt~~y~aPE~~~-~~~~~~ks----------E~~-t  141 (208)
                                   ..+..                   .......|+..|+|||.+. +..++.++          |++ +
T Consensus       126 ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~  205 (262)
T cd05077         126 LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN  205 (262)
T ss_pred             eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence                         00000                   0011234688999999886 45677667          876 5


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |..|+....      +.+ ..... .+.. .     +..    .....+.+++..||+.+ ++||++.
T Consensus       206 ~~~p~~~~~------~~~-~~~~~-~~~~-~-----~~~----~~~~~~~~li~~cl~~dp~~Rp~~~  255 (262)
T cd05077         206 GEIPLKDKT------LAE-KERFY-EGQC-M-----LVT----PSCKELADLMTHCMNYDPNQRPFFR  255 (262)
T ss_pred             CCCCCCCcc------hhH-HHHHH-hcCc-c-----CCC----CChHHHHHHHHHHcCCChhhCcCHH
Confidence            887776321      111 11111 1111 0     001    11235667888999999 9999973

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.25  E-value=6.1e-11  Score=91.33  Aligned_cols=147  Identities=13%  Similarity=0.198  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           .+.+..++|+||+++++|.+++.+..   .+++.....++.++         
T Consensus        41 ~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~  117 (264)
T cd06626          41 KTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHS  117 (264)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999998           56788999999999999999998643   36777777666655         


Q ss_pred             ---------------CCC----------------Cccc----cccccCCcCccCccccccCC---CCcce----------
Q 048710          106 ---------------LAD----------------QTYM----TTQVQGTFGYLDLQYFQSSP---FTEKS----------  137 (208)
Q Consensus       106 ---------------~~~----------------~~~~----~~~~~gt~~y~aPE~~~~~~---~~~ks----------  137 (208)
                                     ..+                ....    .....++..|++||++.+..   ++.++          
T Consensus       118 ~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~  197 (264)
T cd06626         118 HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL  197 (264)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence                           000                0000    01245688999999998765   66666          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+++|..||....  .   -........ .+.     .+.+....  .....+.++...||+.+ ++||+++
T Consensus       198 ~l~~g~~pf~~~~--~---~~~~~~~~~-~~~-----~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~  256 (264)
T cd06626         198 EMATGKRPWSELD--N---EFQIMFHVG-AGH-----KPPIPDSL--QLSPEGKDFLDRCLESDPKKRPTAS  256 (264)
T ss_pred             HHHhCCCCccCCc--c---hHHHHHHHh-cCC-----CCCCCccc--ccCHHHHHHHHHHccCCcccCCCHH
Confidence            9999999987331  1   111111111 111     11111111  11334557778999999 9999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.25  E-value=1.3e-11  Score=95.17  Aligned_cols=144  Identities=16%  Similarity=0.222  Sum_probs=91.5

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....|..|+.++..++            ..++..++|+||+++|+|.+++.+...  .+.+...+.++.++         
T Consensus        39 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~  116 (262)
T cd05058          39 EVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLAS  116 (262)
T ss_pred             HHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3567899999999887            245568899999999999999986433  36677666666665         


Q ss_pred             ---------------CC-------C--Ccc-----------ccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ---------------LA-------D--QTY-----------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------~~-------~--~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                     ..       +  ...           ......++..|+|||...+..++.++          |++
T Consensus       117 ~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~  196 (262)
T cd05058         117 KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM  196 (262)
T ss_pred             CCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence                           00       0  000           00123356789999999888888888          899


Q ss_pred             cC-CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          141 TK-EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       141 tg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      || ..|+...      ........ ...+...         ..+...+..+.+++..||+.+ ++||++.
T Consensus       197 ~~~~~~~~~~------~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  250 (262)
T cd05058         197 TRGAPPYPDV------DSFDITVY-LLQGRRL---------LQPEYCPDPLYEVMLSCWHPKPEMRPTFS  250 (262)
T ss_pred             cCCCCCCCCC------CHHHHHHH-HhcCCCC---------CCCCcCCHHHHHHHHHHcCCChhhCCCHH
Confidence            95 5555422      11122221 1122110         011112345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.25  E-value=5.1e-11  Score=92.74  Aligned_cols=146  Identities=16%  Similarity=0.097  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           ...+..|+|+||+++|+|.+++.+.... .+++.....++.++           
T Consensus        37 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          37 EQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             hHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456789999999998           5667899999999999999999865432 57888877776666           


Q ss_pred             -------------CCC---------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 -------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 -------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                   ..+               .........|+..|++||+..+..++.++          |+++|+.||.
T Consensus       116 i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  195 (277)
T cd05577         116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFR  195 (277)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence                         000               00111234567899999999887777777          9999999987


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ......   ....+.......      ...+    +......+.++..+||+.+ ++||+.
T Consensus       196 ~~~~~~---~~~~~~~~~~~~------~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         196 QRKEKV---EKEELKRRTLEM------AVEY----PDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             CCcccc---cHHHHHhccccc------cccC----CccCCHHHHHHHHHHccCChhHccCC
Confidence            432111   111111111000      1111    1112234567777999999 999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.25  E-value=2.4e-11  Score=95.71  Aligned_cols=144  Identities=13%  Similarity=0.237  Sum_probs=95.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++..++           ...+..++|+||+++|+|.+++.+.    .+++.+...++.++          
T Consensus        59 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~  134 (297)
T cd06656          59 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN  134 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999987           5677899999999999999999753    47788877777766          


Q ss_pred             --------------C-------CC---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    .       .+         .........|++.|++||...+..++.++          |++||..|
T Consensus       135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~p  214 (297)
T cd06656         135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP  214 (297)
T ss_pred             CcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                          0       00         00011234578899999999888888777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |........      ..... .+..     +.+  ..+......+.+++.+||+.+ ++||++.
T Consensus       215 f~~~~~~~~------~~~~~-~~~~-----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~  264 (297)
T cd06656         215 YLNENPLRA------LYLIA-TNGT-----PEL--QNPERLSAVFRDFLNRCLEMDVDRRGSAK  264 (297)
T ss_pred             CCCCCcchh------eeeec-cCCC-----CCC--CCccccCHHHHHHHHHHccCChhhCcCHH
Confidence            974321110      00000 0000     000  011122234567788999999 9999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.25  E-value=8.4e-11  Score=92.85  Aligned_cols=143  Identities=17%  Similarity=0.149  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++..++           ...+..++||||+++|+|.+++.+..   .+++.....++.++           
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~  121 (305)
T cd05609          45 IQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYG  121 (305)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457889999999887           56778899999999999999997643   47777776666555           


Q ss_pred             -------------CC-------C--Ccc----------------------ccccccCCcCccCccccccCCCCcce----
Q 048710          106 -------------LA-------D--QTY----------------------MTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       106 -------------~~-------~--~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                                   ..       +  ...                      ......|+..|+|||.+.+..++.++    
T Consensus       122 i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  201 (305)
T cd05609         122 IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWA  201 (305)
T ss_pred             ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHH
Confidence                         00       0  000                      00123578899999999888888887    


Q ss_pred             ------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                            |++||..||....      ...... ....+..   ..+....    .....+.+++.+||+.+ ++||++
T Consensus       202 lG~vl~el~~g~~pf~~~~------~~~~~~-~~~~~~~---~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~  264 (305)
T cd05609         202 MGIILYEFLVGCVPFFGDT------PEELFG-QVISDDI---EWPEGDE----ALPADAQDLISRLLRQNPLERLGT  264 (305)
T ss_pred             HHHHHHHHHhCCCCCCCCC------HHHHHH-HHHhccc---CCCCccc----cCCHHHHHHHHHHhccChhhccCc
Confidence                  9999999986321      111111 2212211   1111111    12334567888999999 999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.25  E-value=8.5e-11  Score=90.41  Aligned_cols=144  Identities=15%  Similarity=0.148  Sum_probs=99.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|++++.+++           .+.+..++|+||+++++|.+++....   .++......++.++          
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~  119 (258)
T cd05578          43 SVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSK  119 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhC
Confidence            4568999999999988           66788999999999999999997652   57787777777777          


Q ss_pred             --------------CC---------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 --------------LA---------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~---------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..               ..........|+..|++||...+..++.++          ++++|..||
T Consensus       120 ~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  199 (258)
T cd05578         120 GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY  199 (258)
T ss_pred             CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence                          00               000011245578899999999887778777          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ......    ....+.......  .    +    ..+......+.+++.+||+.+ ++||+.
T Consensus       200 ~~~~~~----~~~~~~~~~~~~--~----~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~  247 (258)
T cd05578         200 RGHSRT----IRDQIRAKQETA--D----V----LYPATWSTEAIDAINKLLERDPQKRLGD  247 (258)
T ss_pred             CCCCcc----HHHHHHHHhccc--c----c----cCcccCcHHHHHHHHHHccCChhHcCCc
Confidence            854321    122222222111  0    1    111222356667888999999 999986

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.24  E-value=7.9e-11  Score=92.15  Aligned_cols=144  Identities=13%  Similarity=0.187  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...|.+|+.++.+++            ...+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        48 ~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~  124 (288)
T cd05583          48 AEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL  124 (288)
T ss_pred             HHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC
Confidence            356889999999885            55677899999999999999997643   46777766666555          


Q ss_pred             --------------CCC-----------------CccccccccCCcCccCccccccCC--CCcce----------eEecC
Q 048710          106 --------------LAD-----------------QTYMTTQVQGTFGYLDLQYFQSSP--FTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~--~~~ks----------E~~tg  142 (208)
                                    ..+                 .........|+..|++||...+..  .+.++          |++||
T Consensus       125 ~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg  204 (288)
T cd05583         125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG  204 (288)
T ss_pred             CeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhC
Confidence                          000                 000111245789999999987654  55555          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..|+....  ............. ..      ++.++.    .....+.++..+||+.+ ++|||+
T Consensus       205 ~~p~~~~~--~~~~~~~~~~~~~-~~------~~~~~~----~~~~~l~~li~~~l~~~p~~R~t~  257 (288)
T cd05583         205 ASPFTVDG--EQNSQSEISRRIL-KS------KPPFPK----TMSAEARDFIQKLLEKDPKKRLGA  257 (288)
T ss_pred             CCCcccCc--ccchHHHHHHHHH-cc------CCCCCc----ccCHHHHHHHHHHhcCCHhhccCc
Confidence            99986321  1111112111111 11      111111    12234567777999999 999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=6.9e-11  Score=90.95  Aligned_cols=147  Identities=15%  Similarity=0.196  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|++++.+++           .+.+..+++|||+++++|.+++.....  .++..+...++.++          
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~  120 (262)
T cd06613          43 DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHET  120 (262)
T ss_pred             hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4568999999999998           567889999999999999999976532  47777777777666          


Q ss_pred             --------------C-------CC---------CccccccccCCcCccCccccccC---CCCcce----------eEecC
Q 048710          106 --------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQSS---PFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~~---~~~~ks----------E~~tg  142 (208)
                                    .       .+         .........|+..|+|||...+.   .++.++          |++||
T Consensus       121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg  200 (262)
T cd06613         121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAEL  200 (262)
T ss_pred             CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhC
Confidence                          0       00         00011234578899999998776   777776          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.|+......      ....... ....   -.+.+  ..+......+.+++.+||+.+ .+||++
T Consensus       201 ~~p~~~~~~~------~~~~~~~-~~~~---~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~  254 (262)
T cd06613         201 QPPMFDLHPM------RALFLIS-KSNF---PPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTA  254 (262)
T ss_pred             CCCCCCCCHH------HHHHHHH-hccC---CCccc--cchhhhhHHHHHHHHHHcCCChhhCCCH
Confidence            9998743210      1111111 1111   01111  111233445778888999999 999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=2.7e-11  Score=97.45  Aligned_cols=99  Identities=16%  Similarity=0.272  Sum_probs=76.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|..|++++..++           .+.+..++||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~  120 (350)
T cd05573          44 QIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKL  120 (350)
T ss_pred             HHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999887           67788999999999999999998752   47777776666665          


Q ss_pred             -----------------------CCC------Cc------------------------------cccccccCCcCccCcc
Q 048710          106 -----------------------LAD------QT------------------------------YMTTQVQGTFGYLDLQ  126 (208)
Q Consensus       106 -----------------------~~~------~~------------------------------~~~~~~~gt~~y~aPE  126 (208)
                                             .-+      ..                              .......||+.|+|||
T Consensus       121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  200 (350)
T cd05573         121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE  200 (350)
T ss_pred             CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence                                   000      00                              1122456899999999


Q ss_pred             ccccCCCCcce----------eEecCCCCCCC
Q 048710          127 YFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       127 ~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                      .+.+..++.++          |++||+.||..
T Consensus       201 ~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~  232 (350)
T cd05573         201 VLRGTPYGLECDWWSLGVILYEMLYGFPPFYS  232 (350)
T ss_pred             HHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence            99998888888          99999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.24  E-value=1.9e-11  Score=94.93  Aligned_cols=146  Identities=16%  Similarity=0.271  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCC------CCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEE------FPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~------~~l~~~~r~~i~~~i----  105 (208)
                      ....|.+|++++.+++           .+.+..++|+||+++|+|.+++......      ..++|..+..++.++    
T Consensus        51 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l  130 (275)
T cd05046          51 LQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM  130 (275)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            3467999999999997           5667889999999999999999764421      148899998888877    


Q ss_pred             --------------------CCCC-----------------ccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 --------------------LADQ-----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 --------------------~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                          ..+.                 ........+++.|++||.+.+..++.++          |
T Consensus       131 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  210 (275)
T cd05046         131 DHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWE  210 (275)
T ss_pred             HHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHH
Confidence                                0000                 0001123446779999999887777777          8


Q ss_pred             Eec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +++ |..||.....      .. +......+.....        .+......+.+++.+||+.+ ++||++
T Consensus       211 l~~~~~~p~~~~~~------~~-~~~~~~~~~~~~~--------~~~~~~~~l~~~i~~~l~~~p~~Rp~~  266 (275)
T cd05046         211 VFTQGELPFYGLSD------EE-VLNRLQAGKLELP--------VPEGCPSRLYKLMTRCWAVNPKDRPSF  266 (275)
T ss_pred             HHhCCCCCccccch------HH-HHHHHHcCCcCCC--------CCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            887 7778753211      11 1112222222111        11122345677888999999 999985

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.24  E-value=5.3e-11  Score=93.14  Aligned_cols=144  Identities=16%  Similarity=0.217  Sum_probs=96.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++..++           ...+..++|+||+++++|.+++...    .+++.....++.++          
T Consensus        59 ~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~  134 (285)
T cd06648          59 RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ  134 (285)
T ss_pred             HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456889999999887           5668899999999999999999862    47888887777777          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       +         .........|+..|+|||...+..++.++          |+++|+.|
T Consensus       135 ~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p  214 (285)
T cd06648         135 GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPP  214 (285)
T ss_pred             CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence                          00       0         00011224578899999999888888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....      ....... ...+..     +.+..  +......+.+++.+||+.+ ++||++.
T Consensus       215 ~~~~~------~~~~~~~-~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~  264 (285)
T cd06648         215 YFNEP------PLQAMKR-IRDNLP-----PKLKN--LHKVSPRLRSFLDRMLVRDPAQRATAA  264 (285)
T ss_pred             CcCCC------HHHHHHH-HHhcCC-----CCCcc--cccCCHHHHHHHHHHcccChhhCcCHH
Confidence            86321      1111221 111111     11110  1112345677888999999 9999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.24  E-value=1.8e-11  Score=95.54  Aligned_cols=145  Identities=12%  Similarity=0.237  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHHHHH
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLHIVV  103 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~i~~  103 (208)
                      ...|..|+.++.+++           ...+..++++||+++++|.+++....             ....+++.....++.
T Consensus        52 ~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (283)
T cd05091          52 REEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVT  131 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHH
Confidence            457899999999987           55677899999999999999985321             011477777777766


Q ss_pred             hC------------------------C-------CCC-----------ccccccccCCcCccCccccccCCCCcce----
Q 048710          104 DS------------------------L-------ADQ-----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       104 ~i------------------------~-------~~~-----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                      ++                        .       .+.           ........+++.|+|||.+.++.++.++    
T Consensus       132 ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  211 (283)
T cd05091         132 QIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWS  211 (283)
T ss_pred             HHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHH
Confidence            66                        0       000           0001123346789999999888888877    


Q ss_pred             ------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                            |++| |..|+....      .... ......+...         ..+...+..+.+++..||+.+ ++||++.
T Consensus       212 lG~~l~el~~~g~~p~~~~~------~~~~-~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~  274 (283)
T cd05091         212 YGVVLWEVFSYGLQPYCGYS------NQDV-IEMIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFK  274 (283)
T ss_pred             HHHHHHHHHcCCCCCCCCCC------HHHH-HHHHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence                  9998 788876321      1122 2222222221         112233445678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.23  E-value=2.1e-11  Score=93.43  Aligned_cols=146  Identities=17%  Similarity=0.251  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....++.+|++++++++           .+.+..++|+||+++++|.+++.+.. ....+++.....++.++        
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh  120 (256)
T cd08530          41 KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH  120 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            34567889999999887           66688999999999999999997622 12257888777777665        


Q ss_pred             ----------------CCCC--------------ccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ----------------LADQ--------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                      ..+.              ........|+..|++||...+..++.++          |+++|+.|
T Consensus       121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  200 (256)
T cd08530         121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPP  200 (256)
T ss_pred             hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                            0000              0011123478899999999888888777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +....      ... .......+...         ..+......+.++...||+.+ ++||++
T Consensus       201 ~~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~  247 (256)
T cd08530         201 FEARS------MQD-LRYKVQRGKYP---------PIPPIYSQDLQNFIRSMLQVKPKLRPNC  247 (256)
T ss_pred             CCCCC------HHH-HHHHHhcCCCC---------CCchhhCHHHHHHHHHHcCCCcccCCCH
Confidence            87432      111 11122222221         111233455778888999999 999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.23  E-value=1.4e-11  Score=94.39  Aligned_cols=105  Identities=16%  Similarity=0.302  Sum_probs=81.4

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .-.+...++..+|+.+|.+++           -.+.-+++|||||--||+.+.++-.++  +|.......++...     
T Consensus        66 VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~  143 (502)
T KOG0574|consen   66 VPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQ  143 (502)
T ss_pred             cCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHH
Confidence            345567889999999999998           566678999999999999999986544  57766555554433     


Q ss_pred             -----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                         ..+.-....++.||+.|||||+++.-.|+.++          ||.
T Consensus       144 YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMA  223 (502)
T KOG0574|consen  144 YLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMA  223 (502)
T ss_pred             HHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhh
Confidence                                               11222334678999999999999988888877          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      -|+.||..
T Consensus       224 EG~PPYsD  231 (502)
T KOG0574|consen  224 EGRPPYSD  231 (502)
T ss_pred             cCCCCccc
Confidence            99999984

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.23  E-value=1e-11  Score=98.00  Aligned_cols=143  Identities=16%  Similarity=0.307  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           48 VNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+|.+|+.++.+++          ...+..++++||+++|+|.+++.....  .+++.....++.++            
T Consensus        53 ~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~i  130 (303)
T cd05110          53 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEERRL  130 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence            347899999999987          334557799999999999999986543  47888888777776            


Q ss_pred             ------------CC-------C--Cc---------cccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ------------LA-------D--QT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ------------~~-------~--~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                  ..       +  ..         .......++..|++||.+.+..++.++          |++| |+.
T Consensus       131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~  210 (303)
T cd05110         131 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK  210 (303)
T ss_pred             eccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                        00       0  00         001123346789999999888888888          8887 889


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+....       ..........+...         ..+......+..++..||..+ ++||+|+
T Consensus       211 p~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~  259 (303)
T cd05110         211 PYDGIP-------TREIPDLLEKGERL---------PQPPICTIDVYMVMVKCWMIDADSRPKFK  259 (303)
T ss_pred             CCCCCC-------HHHHHHHHHCCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            986321       11122222222111         001112345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.23  E-value=1.5e-10  Score=91.62  Aligned_cols=104  Identities=15%  Similarity=0.185  Sum_probs=74.7

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .......+.+|+.++.+++           .+.+..+++|||+++|+|.+++.+.... .+++.....++.++       
T Consensus        39 ~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~L  117 (314)
T cd08216          39 SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPE-GLPELAIAFILKDVLNALDYI  117 (314)
T ss_pred             chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999988           5678899999999999999999864332 46777666666665       


Q ss_pred             -----------------CC-------C--C--------------ccccccccCCcCccCcccccc--CCCCcce------
Q 048710          106 -----------------LA-------D--Q--------------TYMTTQVQGTFGYLDLQYFQS--SPFTEKS------  137 (208)
Q Consensus       106 -----------------~~-------~--~--------------~~~~~~~~gt~~y~aPE~~~~--~~~~~ks------  137 (208)
                                       ..       +  .              ........++..|+|||.+.+  ..++.++      
T Consensus       118 H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G  197 (314)
T cd08216         118 HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG  197 (314)
T ss_pred             HHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHH
Confidence                             00       0  0              000122346778999999865  3466666      


Q ss_pred             ----eEecCCCCCCC
Q 048710          138 ----NLLTKEKPICL  148 (208)
Q Consensus       138 ----E~~tg~~p~~~  148 (208)
                          |+++|+.||..
T Consensus       198 ~il~el~~g~~pf~~  212 (314)
T cd08216         198 ITACELANGHVPFKD  212 (314)
T ss_pred             HHHHHHHhCCCCCCC
Confidence                99999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.23  E-value=5.5e-11  Score=92.72  Aligned_cols=146  Identities=15%  Similarity=0.193  Sum_probs=90.8

Q ss_pred             hhHHHHHHHHHHHhhcc------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--
Q 048710           46 GKVNKLINEVVILSQIN------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--  105 (208)
                      ....++..|+.++.++.                  ...+..++||||+++|+|.+++...... .+++.....++.++  
T Consensus        54 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~  132 (282)
T cd06636          54 DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILR  132 (282)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHH
Confidence            34457888999888873                  1346789999999999999999764433 47777666666655  


Q ss_pred             ----------------------C-------CCC---------ccccccccCCcCccCccccc-----cCCCCcce-----
Q 048710          106 ----------------------L-------ADQ---------TYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS-----  137 (208)
Q Consensus       106 ----------------------~-------~~~---------~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks-----  137 (208)
                                            .       .+.         ........|+..|+|||.+.     +..++.++     
T Consensus       133 al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvwsl  212 (282)
T cd06636         133 GLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSL  212 (282)
T ss_pred             HHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHH
Confidence                                  0       000         00112345788999999875     34455566     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++||..|+......      ..+.... ...     .+.+.   .......+.+++.+||+.+ .+||+.
T Consensus       213 G~~l~el~~g~~p~~~~~~~------~~~~~~~-~~~-----~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~  273 (282)
T cd06636         213 GITAIEMAEGAPPLCDMHPM------RALFLIP-RNP-----PPKLK---SKKWSKKFIDFIEGCLVKNYLSRPST  273 (282)
T ss_pred             HHHHHHHHhCCCCccccCHH------hhhhhHh-hCC-----CCCCc---ccccCHHHHHHHHHHhCCChhhCcCH
Confidence                 999999998643210      0011111 111     11111   1122345677888999999 999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.23  E-value=9.5e-11  Score=91.90  Aligned_cols=147  Identities=16%  Similarity=0.166  Sum_probs=94.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+.++.+++           ...+..++||||+++|+|..++.+...  .+++.....++.++        
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH  127 (292)
T cd06644          50 EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLH  127 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh
Confidence            334577999999999988           556789999999999999998876443  58888888877777        


Q ss_pred             ----------------C-------CC---------CccccccccCCcCccCcccccc-----CCCCcce----------e
Q 048710          106 ----------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS----------N  138 (208)
Q Consensus       106 ----------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks----------E  138 (208)
                                      .       .+         .........|+..|+|||++.+     ..++.++          |
T Consensus       128 ~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~e  207 (292)
T cd06644         128 SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE  207 (292)
T ss_pred             cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHH
Confidence                            0       00         0001123347889999999853     3345555          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||..|+....      ........ .........       .+......+.+++.+||+.+ ++||++
T Consensus       208 l~~g~~p~~~~~------~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~  263 (292)
T cd06644         208 MAQIEPPHHELN------PMRVLLKI-AKSEPPTLS-------QPSKWSMEFRDFLKTALDKHPETRPSA  263 (292)
T ss_pred             HhcCCCCCcccc------HHHHHHHH-hcCCCccCC-------CCcccCHHHHHHHHHHhcCCcccCcCH
Confidence            999999986321      11111111 111111111       11122235667888999999 999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.23  E-value=4.3e-11  Score=93.40  Aligned_cols=97  Identities=15%  Similarity=0.154  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++..++           ...+..++|+||+++++|.++.....   .++|.+...++.++           
T Consensus        44 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~  120 (286)
T cd07846          44 KKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSHN  120 (286)
T ss_pred             hHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456889999999887           67788999999999999999877543   48899888888877           


Q ss_pred             -------------CCC----------------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -------------LAD----------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                   ..+                .........|+..|+|||++.+ ..++.++          |++||+.|
T Consensus       121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCC
Confidence                         000                0011123457889999999875 3456666          99999988


Q ss_pred             CC
Q 048710          146 IC  147 (208)
Q Consensus       146 ~~  147 (208)
                      +.
T Consensus       201 ~~  202 (286)
T cd07846         201 FP  202 (286)
T ss_pred             CC
Confidence            86

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.23  E-value=2.4e-11  Score=94.10  Aligned_cols=146  Identities=14%  Similarity=0.285  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCC------CeEEEEEeeCCCCChhhHhhcCC---CCCCCCHHHHHHHHHhC
Q 048710           46 GKVNKLINEVVILSQIN-----------LET------EVLLLVYEFISNGTVYQYINNQN---EEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~------~~~~lv~ey~~~GsL~~~l~~~~---~~~~l~~~~r~~i~~~i  105 (208)
                      .....|.+|++.+..++           ...      ...++|+||+++|+|.+++....   ....+++.....++.++
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i  122 (273)
T cd05035          43 SEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDI  122 (273)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHH
Confidence            34567999999999887           111      23789999999999999986432   22258888877777776


Q ss_pred             ------------------------CC-------C--Cc--------c-ccccccCCcCccCccccccCCCCcce------
Q 048710          106 ------------------------LA-------D--QT--------Y-MTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       106 ------------------------~~-------~--~~--------~-~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                                              ..       +  ..        . ......++..|+|||...+..++.++      
T Consensus       123 ~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG  202 (273)
T cd05035         123 ALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG  202 (273)
T ss_pred             HHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHH
Confidence                                    00       0  00        0 00112245789999999888888888      


Q ss_pred             ----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |+++ |..|+....   .   .. +......+...     .+    +......+.+++.+||+.+ ++||++
T Consensus       203 ~il~el~~~g~~p~~~~~---~---~~-~~~~~~~~~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rp~~  262 (273)
T cd05035         203 VTMWEIATRGQTPYPGVE---N---HE-IYDYLRHGNRL-----KQ----PEDCLDELYDLMYSCWRADPKDRPTF  262 (273)
T ss_pred             HHHHHHHhCCCCCCCCCC---H---HH-HHHHHHcCCCC-----CC----CcCCCHHHHHHHHHHcCCChhhCcCH
Confidence                8898 888876321   1   11 11222222111     11    1223346778888999999 999997

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=4.4e-11  Score=94.83  Aligned_cols=144  Identities=15%  Similarity=0.243  Sum_probs=95.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|..|++++.+++           ...+..++||||+++|+|.+++...... .+++.....++.++          
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~  122 (316)
T cd05574          44 KVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGK-CLSEEVARFYAAEVLLALEYLHLL  122 (316)
T ss_pred             HHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCC-ccCHHHHHHHHHHHHHHHHHHHHC
Confidence            4467899999999887           5677899999999999999999754322 57888777766666          


Q ss_pred             --------------CCC---------Cc------------------------------------cccccccCCcCccCcc
Q 048710          106 --------------LAD---------QT------------------------------------YMTTQVQGTFGYLDLQ  126 (208)
Q Consensus       106 --------------~~~---------~~------------------------------------~~~~~~~gt~~y~aPE  126 (208)
                                    ..+         ..                                    .......||..|+|||
T Consensus       123 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE  202 (316)
T cd05574         123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPE  202 (316)
T ss_pred             CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHH
Confidence                          000         00                                    0011235788999999


Q ss_pred             ccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHH
Q 048710          127 YFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKR  196 (208)
Q Consensus       127 ~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~  196 (208)
                      +..+..++.++          |+++|+.||......      ....... ....      ..  .........+.++..+
T Consensus       203 ~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~------~~~~~~~-~~~~------~~--~~~~~~~~~~~~li~~  267 (316)
T cd05574         203 VISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD------ETFSNIL-KKEV------TF--PGSPPVSSSARDLIRK  267 (316)
T ss_pred             HHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH------HHHHHHh-cCCc------cC--CCccccCHHHHHHHHH
Confidence            99888888777          999999998743211      1111111 1111      00  0011134566788889


Q ss_pred             hhcCC-CCCCC
Q 048710          197 CLNLN-EKKPT  206 (208)
Q Consensus       197 C~~~~-~~RPs  206 (208)
                      ||+.+ ++||+
T Consensus       268 ~l~~~p~~R~s  278 (316)
T cd05574         268 LLVKDPSKRLG  278 (316)
T ss_pred             HccCCHhHCCC
Confidence            99999 99998

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.23  E-value=7.5e-11  Score=90.92  Aligned_cols=149  Identities=18%  Similarity=0.234  Sum_probs=98.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++..++           ...+..++|+||+++++|.+++.+......+++.....++.++          
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~  121 (267)
T cd06610          42 SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN  121 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4568999999999887           6778899999999999999999864332257888777776666          


Q ss_pred             --------------CCC------------------Cc--cccccccCCcCccCccccccC-CCCcce----------eEe
Q 048710          106 --------------LAD------------------QT--YMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLL  140 (208)
Q Consensus       106 --------------~~~------------------~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~  140 (208)
                                    ..+                  ..  .......|+..|++||.+... .++.++          |++
T Consensus       122 ~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~  201 (267)
T cd06610         122 GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA  201 (267)
T ss_pred             CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH
Confidence                          000                  00  011233578999999998776 677777          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCc-HHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGG-KDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||+.|+......      ..........      ++.+....+ ......+.++...||+.+ ++||++
T Consensus       202 ~g~~p~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  258 (267)
T cd06610         202 TGAAPYSKYPPM------KVLMLTLQND------PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTA  258 (267)
T ss_pred             hCCCCccccChh------hhHHHHhcCC------CCCcCCccccccccHHHHHHHHHHcCCChhhCcCH
Confidence            999998743211      1111111111      111111111 133455678888999999 999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.22  E-value=4e-11  Score=95.46  Aligned_cols=139  Identities=14%  Similarity=0.226  Sum_probs=88.0

Q ss_pred             HHHHHHHH-HHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVV-ILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~-~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+..|.. ++..++           .+.+..|+||||+++|+|..++.+..   .++......++.++           
T Consensus        40 ~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~  116 (321)
T cd05603          40 NHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSLN  116 (321)
T ss_pred             HHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34555554 455554           56788999999999999999987543   35555555555555           


Q ss_pred             ----------------------CC-------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LA-------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-       ..........||+.|+|||.+.+..++.++          |++||..||
T Consensus       117 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  196 (321)
T cd05603         117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPF  196 (321)
T ss_pred             eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCC
Confidence                                  00       011112345689999999999888888887          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ... +......+..      .+    +......+.++..+|++.+ .+||+.
T Consensus       197 ~~~~------~~~-~~~~i~~~~~------~~----~~~~~~~~~~li~~~l~~~p~~R~~~  241 (321)
T cd05603         197 YSRD------VSQ-MYDNILHKPL------QL----PGGKTVAACDLLVGLLHKDQRRRLGA  241 (321)
T ss_pred             CCCC------HHH-HHHHHhcCCC------CC----CCCCCHHHHHHHHHHccCCHhhcCCC
Confidence            7321      111 1111111111      11    1112234567788999999 999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.22  E-value=1.4e-10  Score=89.33  Aligned_cols=145  Identities=12%  Similarity=0.148  Sum_probs=98.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------C-
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------L-  106 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------~-  106 (208)
                      ....|.+|+..+.+++           ...+..++|+||+++++|.+++....   .++......++.++        . 
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~  118 (264)
T cd06623          42 FRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLHTK  118 (264)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhcc
Confidence            4568999999999987           56788999999999999999998652   57788777777666        0 


Q ss_pred             ----------------CCC----------------ccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          107 ----------------ADQ----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       107 ----------------~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                      .+.                ........|+..|+|||...+..++.++          |++||..
T Consensus       119 ~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~  198 (264)
T cd06623         119 RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKF  198 (264)
T ss_pred             CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                            000                0001134578899999999888777777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHH-HHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKD-EIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.....   ........... ....     +.    .+.. ....+.++...||+.+ ++||++
T Consensus       199 p~~~~~~---~~~~~~~~~~~-~~~~-----~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~  250 (264)
T cd06623         199 PFLPPGQ---PSFFELMQAIC-DGPP-----PS----LPAEEFSPEFRDFISACLQKDPKKRPSA  250 (264)
T ss_pred             CCccccc---cCHHHHHHHHh-cCCC-----CC----CCcccCCHHHHHHHHHHccCChhhCCCH
Confidence            9874321   11222122111 1111     11    1111 3346677888999999 999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.22  E-value=1.4e-10  Score=90.90  Aligned_cols=139  Identities=17%  Similarity=0.198  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|++++.+++           .+.+..++|+||+++|+|.+++....   .++...+..++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~  121 (290)
T cd05580          45 VEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSLD  121 (290)
T ss_pred             HHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999987           66788999999999999999998653   47777777776666           


Q ss_pred             -------------CCCC-------------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 -------------LADQ-------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 -------------~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                   ..+.             ........|++.|+|||.+.+...+.++          |++||+.|+...
T Consensus       122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  201 (290)
T cd05580         122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD  201 (290)
T ss_pred             EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence                         0000             0011234578999999999887777776          999999998743


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .       ..........+..      .+....    ...+.++..+||+.+ .+||+
T Consensus       202 ~-------~~~~~~~~~~~~~------~~~~~~----~~~l~~li~~~l~~~p~~R~~  242 (290)
T cd05580         202 N-------PIQIYEKILEGKV------RFPSFF----SPDAKDLIRNLLQVDLTKRLG  242 (290)
T ss_pred             C-------HHHHHHHHhcCCc------cCCccC----CHHHHHHHHHHccCCHHHccC
Confidence            2       1111111212211      111111    234556777999999 99984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.21  E-value=6.5e-11  Score=93.02  Aligned_cols=143  Identities=17%  Similarity=0.227  Sum_probs=94.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           ...+..++||||+++++|.+++.+.    .+++.....++.++          
T Consensus        62 ~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~  137 (292)
T cd06658          62 RRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ  137 (292)
T ss_pred             HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999887           5678899999999999999998653    47788887777766          


Q ss_pred             --------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+                .........|+..|+|||...+..++.++          |+++|+.|
T Consensus       138 ~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p  217 (292)
T cd06658         138 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP  217 (292)
T ss_pred             CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                          000                00111234578999999999888888877          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.....     . ..+. ....     .+++.+....  .....+..+...||+.+ ++|||+
T Consensus       218 ~~~~~~-----~-~~~~-~~~~-----~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~Rpt~  266 (292)
T cd06658         218 YFNEPP-----L-QAMR-RIRD-----NLPPRVKDSH--KVSSVLRGFLDLMLVREPSQRATA  266 (292)
T ss_pred             CCCCCH-----H-HHHH-HHHh-----cCCCcccccc--ccCHHHHHHHHHHccCChhHCcCH
Confidence            873211     1 1111 1111     1111111111  11224456677999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.21  E-value=4.5e-11  Score=92.43  Aligned_cols=146  Identities=14%  Similarity=0.168  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++|+||+++|+|.++++...   .+++.....++.++           
T Consensus        50 ~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  126 (267)
T cd06646          50 FSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSKG  126 (267)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            346788999999887           56778999999999999999997543   47777777776666           


Q ss_pred             -------------C-------CC---------CccccccccCCcCccCccccc---cCCCCcce----------eEecCC
Q 048710          106 -------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~  143 (208)
                                   .       .+         .........|+..|+|||.+.   ...++.++          |++||+
T Consensus       127 i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~  206 (267)
T cd06646         127 KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             ccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCC
Confidence                         0       00         000112345788999999874   33455555          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .|+....+...      .. ......   ...+....  .......+.+++.+||+.+ ++||+++
T Consensus       207 ~p~~~~~~~~~------~~-~~~~~~---~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~  260 (267)
T cd06646         207 PPMFDLHPMRA------LF-LMSKSN---FQPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAE  260 (267)
T ss_pred             CCccccchhhh------he-eeecCC---CCCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHH
Confidence            99863221110      00 000111   11111111  1112345667888999999 9999963

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.21  E-value=3e-11  Score=94.34  Aligned_cols=98  Identities=14%  Similarity=0.103  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++.+++           ...+..++|+||++++++..++.+..   .+++.....++.++           
T Consensus        44 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          44 KKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             hhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999987           56778999999999988877765432   47777777766666           


Q ss_pred             -------------CC-----------------CCccccccccCCcCccCccccccC-CCCcce----------eEecCCC
Q 048710          106 -------------LA-----------------DQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------~~-----------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~  144 (208)
                                   ..                 ..........|+..|+|||++.+. .++.++          |+++|+.
T Consensus       121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  200 (288)
T cd07833         121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP  200 (288)
T ss_pred             eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence                         00                 000011234567889999999887 777777          9999999


Q ss_pred             CCCC
Q 048710          145 PICL  148 (208)
Q Consensus       145 p~~~  148 (208)
                      |+..
T Consensus       201 ~~~~  204 (288)
T cd07833         201 LFPG  204 (288)
T ss_pred             CCCC
Confidence            8874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.21  E-value=1.9e-10  Score=87.94  Aligned_cols=145  Identities=14%  Similarity=0.189  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCC--CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQIN-----------LET--EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~--~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....|.+|+.++++++           ...  +..++|+||+++++|.+++.+..   .++|..+..++.++       
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~l  117 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYL  117 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHH
Confidence            34678999999999988           344  78999999999999999998654   58888888888877       


Q ss_pred             -----------------C---------------CCCcc---ccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------L---------------ADQTY---MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------~---------------~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                       .               .....   ......++..|++||...+...+.++          |++
T Consensus       118 h~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~  197 (260)
T cd06606         118 HSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA  197 (260)
T ss_pred             HHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH
Confidence                             0               00000   02234578899999999887777777          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +|..|+....     .....+.........         ...+......+.+++.+|++.+ ++||++
T Consensus       198 ~g~~p~~~~~-----~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~  251 (260)
T cd06606         198 TGKPPWSELG-----NPMAALYKIGSSGEP---------PEIPEHLSEEAKDFLRKCLRRDPKKRPTA  251 (260)
T ss_pred             hCCCCCCCCC-----chHHHHHhccccCCC---------cCCCcccCHHHHHHHHHhCcCChhhCCCH
Confidence            9999987432     111111111111111         1112222456677888999999 999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=2.7e-11  Score=99.19  Aligned_cols=150  Identities=17%  Similarity=0.226  Sum_probs=99.2

Q ss_pred             ccchhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCC------HHHHHHHHH
Q 048710           42 LIYEGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIA------WEMQLHIVV  103 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~------~~~r~~i~~  103 (208)
                      ..+.+...-|.+|+.+|.+|+            ..++.+|+||||= +.+|..+|+..... ..+      |.+-+.++.
T Consensus       397 ~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~  474 (677)
T KOG0596|consen  397 EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVK  474 (677)
T ss_pred             hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHH
Confidence            356677889999999999999            6788999999994 47899999876543 333      444444444


Q ss_pred             hC---------------------------------CCCCcc-ccccccCCcCccCccccccCC-----------CCcce-
Q 048710          104 DS---------------------------------LADQTY-MTTQVQGTFGYLDLQYFQSSP-----------FTEKS-  137 (208)
Q Consensus       104 ~i---------------------------------~~~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~ks-  137 (208)
                      -|                                 ..+.+. .....+||+-||+||.+....           .+.+| 
T Consensus       475 ~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SD  554 (677)
T KOG0596|consen  475 TIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSD  554 (677)
T ss_pred             HHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccc
Confidence            33                                 122222 235678999999999985322           22333 


Q ss_pred             ---------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcH-HHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGK-DEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               +|+-|+.||...        ...    +  .++..+.||.-.-+++. .....++++|..|++.| ++|||
T Consensus       555 vWSLGCILYqMvYgktPf~~~--------~n~----~--aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~s  620 (677)
T KOG0596|consen  555 VWSLGCILYQMVYGKTPFGQI--------INQ----I--AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWS  620 (677)
T ss_pred             hhhhhhHHHHHHhcCCchHHH--------HHH----H--HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCC
Confidence                     888899998721        111    1  23444556643333332 12223889999999999 99998


Q ss_pred             C
Q 048710          207 M  207 (208)
Q Consensus       207 m  207 (208)
                      +
T Consensus       621 i  621 (677)
T KOG0596|consen  621 I  621 (677)
T ss_pred             c
Confidence            6

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.21  E-value=3.1e-11  Score=92.53  Aligned_cols=144  Identities=18%  Similarity=0.314  Sum_probs=96.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|..|+.++.+++           .+.+..+++|||+++|+|.+++...... .+++.+...++.++          
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~  122 (258)
T smart00219       44 QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK  122 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC
Confidence            4568999999999987           5567899999999999999999864431 28888888877776          


Q ss_pred             --------------CCCC-----------------ccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 --------------LADQ-----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 --------------~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                    ..+.                 ........+++.|+|||...+..++.++          |+++ |.
T Consensus       123 ~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~  202 (258)
T smart00219      123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE  202 (258)
T ss_pred             CeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCC
Confidence                          0000                 0000112367899999999888888888          8888 77


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+...      ....... ....+...         ..+......+.+++.+||+.+ ++|||+
T Consensus       203 ~p~~~~------~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (258)
T smart00219      203 SPYPGM------SNEEVLE-YLKKGYRL---------PKPENCPPEIYKLMLQCWAEDPEDRPTF  251 (258)
T ss_pred             CCCCCC------CHHHHHH-HHhcCCCC---------CCCCcCCHHHHHHHHHHCcCChhhCcCH
Confidence            777632      1111111 22222111         111123345677888999999 999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.20  E-value=5e-11  Score=105.09  Aligned_cols=145  Identities=12%  Similarity=0.142  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC--------CCCCCCHHHHHHHHHhC---
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN--------EEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~--------~~~~l~~~~r~~i~~~i---  105 (208)
                      .++|.+|++++.+++           .+.+..++||||+++|+|.+++.+..        .....++...++++.++   
T Consensus        46 ~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~A  125 (932)
T PRK13184         46 KKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT  125 (932)
T ss_pred             HHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHH
Confidence            457999999999988           56778999999999999999987421        11245677777777666   


Q ss_pred             ---------------------CCC---------Cc-------------------------cccccccCCcCccCcccccc
Q 048710          106 ---------------------LAD---------QT-------------------------YMTTQVQGTFGYLDLQYFQS  130 (208)
Q Consensus       106 ---------------------~~~---------~~-------------------------~~~~~~~gt~~y~aPE~~~~  130 (208)
                                           ..+         ..                         .......||+.|||||.+.+
T Consensus       126 L~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             HHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence                                 000         00                         00112468999999999999


Q ss_pred             CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcC
Q 048710          131 SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL  200 (208)
Q Consensus       131 ~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~  200 (208)
                      ..++.++          |++||+.||.......   .   ...    ...   .++.-... ..+.+..+.+++.+|++.
T Consensus       206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k---i---~~~----~~i---~~P~~~~p-~~~iP~~L~~LI~rcL~~  271 (932)
T PRK13184        206 VPASESTDIYALGVILYQMLTLSFPYRRKKGRK---I---SYR----DVI---LSPIEVAP-YREIPPFLSQIAMKALAV  271 (932)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---h---hhh----hhc---cChhhccc-cccCCHHHHHHHHHHccC
Confidence            8888888          9999999987421110   0   000    000   01100000 012234566788899999


Q ss_pred             C-CCCCC
Q 048710          201 N-EKKPT  206 (208)
Q Consensus       201 ~-~~RPs  206 (208)
                      + ++||+
T Consensus       272 DP~kR~s  278 (932)
T PRK13184        272 DPAERYS  278 (932)
T ss_pred             ChhhCcC
Confidence            9 99976

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=4.2e-11  Score=91.62  Aligned_cols=143  Identities=17%  Similarity=0.276  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|++++.+++           .+.+..++|+||+++++|.+++....   .+++..+..++.++         
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~  117 (254)
T cd06627          41 EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHE  117 (254)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhh
Confidence            34568999999999987           55678999999999999999997652   58888888887777         


Q ss_pred             ---------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..+                .........|+..|++||...+..++.++          |+++|..
T Consensus       118 ~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~  197 (254)
T cd06627         118 QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNP  197 (254)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCC
Confidence                           000                00001234578899999998877777666          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+....     .... ..... ....     +.+    +......+.+++.+||+.+ ++||++
T Consensus       198 p~~~~~-----~~~~-~~~~~-~~~~-----~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~  245 (254)
T cd06627         198 PYYDLN-----PMAA-LFRIV-QDDH-----PPL----PEGISPELKDFLMQCFQKDPNLRPTA  245 (254)
T ss_pred             CCCCcc-----HHHH-HHHHh-ccCC-----CCC----CCCCCHHHHHHHHHHHhCChhhCcCH
Confidence            986321     1111 11111 1111     111    1122345567788999999 999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.20  E-value=4e-11  Score=91.77  Aligned_cols=146  Identities=26%  Similarity=0.321  Sum_probs=98.9

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....+..|++++.+++           ...+..++|+||+++++|.+++.+.. ....+++.....++.++        
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh  120 (258)
T cd08215          41 KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH  120 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            44567899999999988           45688999999999999999998642 12268898888888877        


Q ss_pred             ----------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ----------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                      ..       +         .........|+..|+|||...+..++.++          |+++|.
T Consensus       121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~  200 (258)
T cd08215         121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK  200 (258)
T ss_pred             hCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCC
Confidence                            00       0         00011234578899999998888888777          899999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....      ......... .+...     .+    +......+.+++.+||+.+ ++||+.
T Consensus       201 ~p~~~~~------~~~~~~~~~-~~~~~-----~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~  249 (258)
T cd08215         201 HPFEGEN------LLELALKIL-KGQYP-----PI----PSQYSSELRNLVSSLLQKDPEERPSI  249 (258)
T ss_pred             CCCCCCc------HHHHHHHHh-cCCCC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9987331      111122211 22111     11    1122345667888999999 999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.20  E-value=1.6e-10  Score=89.52  Aligned_cols=59  Identities=19%  Similarity=0.275  Sum_probs=44.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i  105 (208)
                      ....|.+|+.++..++           ...+..++||||+++|+|.++|.....  ....++.....++.++
T Consensus        38 ~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi  109 (269)
T cd05042          38 EQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEV  109 (269)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHH
Confidence            3457899999998887           567789999999999999999986532  1134566666666655

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.20  E-value=1.6e-10  Score=91.07  Aligned_cols=143  Identities=15%  Similarity=0.239  Sum_probs=94.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++..++           ...+..++|+||+++|+|.+++...    .+++.....++.++          
T Consensus        61 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~  136 (297)
T cd06659          61 RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ  136 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3457889999999887           5678899999999999999988653    47888887777776          


Q ss_pred             --------------CC----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..                ..........|+.+|+|||++.+..++.++          |+++|+.|
T Consensus       137 ~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  216 (297)
T cd06659         137 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPP  216 (297)
T ss_pred             CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                          00                000112234588999999999888888887          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      ...+. .........     .  .........+.+++..||+.+ ++||++
T Consensus       217 ~~~~~~------~~~~~-~~~~~~~~~-----~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~  265 (297)
T cd06659         217 YFSDSP------VQAMK-RLRDSPPPK-----L--KNAHKISPVLRDFLERMLTREPQERATA  265 (297)
T ss_pred             CCCCCH------HHHHH-HHhccCCCC-----c--cccCCCCHHHHHHHHHHhcCCcccCcCH
Confidence            873211      11111 111111000     0  000111234567777999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.19  E-value=3.8e-11  Score=93.04  Aligned_cols=148  Identities=14%  Similarity=0.242  Sum_probs=94.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCC---CCCCCCHHHHHHHHHh
Q 048710           45 EGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQN---EEFPIAWEMQLHIVVD  104 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~---~~~~l~~~~r~~i~~~  104 (208)
                      ......|..|+.++.+++                 ......++|+||+++|+|.+++....   ....++|.....++.+
T Consensus        41 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (272)
T cd05075          41 RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD  120 (272)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHH
Confidence            344678999999999987                 01235789999999999999985321   2225788888877776


Q ss_pred             C------------------------C-------CC--Ccc---------ccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S------------------------L-------AD--QTY---------MTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i------------------------~-------~~--~~~---------~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                        .       .|  ...         ......++..|++||...+..++.++     
T Consensus       121 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl  200 (272)
T cd05075         121 IASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSF  200 (272)
T ss_pred             HHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence            6                        0       00  000         00122346789999999888888887     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                           |+++ |+.||....   .    ..+......+....         .+......+.+++.+||+.+ ++|||+.
T Consensus       201 G~il~el~~~g~~p~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~  262 (272)
T cd05075         201 GVTMWEIATRGQTPYPGVE---N----SEIYDYLRQGNRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFE  262 (272)
T ss_pred             HHHHHHHHcCCCCCCCCCC---H----HHHHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence                 8888 788886321   1    11222333332111         01122345678888999999 9999973

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=2.7e-10  Score=91.00  Aligned_cols=126  Identities=14%  Similarity=0.145  Sum_probs=80.2

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------------------------------CCC-
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------------------------------LAD-  108 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------------------------------~~~-  108 (208)
                      .+.+..|+||||+++|+|.+++....   .+++.....++.++                                 +-+ 
T Consensus        66 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~  142 (330)
T cd05586          66 QTDSDLYLVTDYMSGGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGL  142 (330)
T ss_pred             ecCCeEEEEEcCCCCChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCc
Confidence            46788999999999999999997643   47777777766666                                 000 


Q ss_pred             ------CccccccccCCcCccCccccccC-CCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccc
Q 048710          109 ------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLF  171 (208)
Q Consensus       109 ------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  171 (208)
                            .........||..|+|||.+.+. .++.++          |++||+.||....      ... .......+.. 
T Consensus       143 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~------~~~-~~~~i~~~~~-  214 (330)
T cd05586         143 SKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED------TQQ-MYRNIAFGKV-  214 (330)
T ss_pred             CcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC------HHH-HHHHHHcCCC-
Confidence                  00112245689999999998754 466666          9999999987421      111 1222222211 


Q ss_pred             ccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          172 EIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       172 ~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           .+...   .....+.++...||+.+ .+||+.
T Consensus       215 -----~~~~~---~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         215 -----RFPKN---VLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             -----CCCCc---cCCHHHHHHHHHHcCCCHHHCCCC
Confidence                 11111   11223456777999999 999963

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.19  E-value=1.6e-10  Score=92.40  Aligned_cols=97  Identities=18%  Similarity=0.188  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           48 VNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ...+.+|+.++.+++                .+....|+||||+. ++|.+++....   .+++.....++.++      
T Consensus        43 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~  118 (338)
T cd07859          43 ATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKY  118 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHH
Confidence            356899999999988                11235899999995 78999997643   48888888877777      


Q ss_pred             ------------------CC---------CCc----------cccccccCCcCccCcccccc--CCCCcce---------
Q 048710          106 ------------------LA---------DQT----------YMTTQVQGTFGYLDLQYFQS--SPFTEKS---------  137 (208)
Q Consensus       106 ------------------~~---------~~~----------~~~~~~~gt~~y~aPE~~~~--~~~~~ks---------  137 (208)
                                        ..         +..          .......||..|+|||++.+  ..++.++         
T Consensus       119 LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl  198 (338)
T cd07859         119 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF  198 (338)
T ss_pred             HHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence                              00         000          00123468999999999865  5677777         


Q ss_pred             -eEecCCCCCCC
Q 048710          138 -NLLTKEKPICL  148 (208)
Q Consensus       138 -E~~tg~~p~~~  148 (208)
                       |++||+.||..
T Consensus       199 ~el~tg~~pf~~  210 (338)
T cd07859         199 AEVLTGKPLFPG  210 (338)
T ss_pred             HHHHcCCCCCCC
Confidence             99999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.19  E-value=1e-10  Score=91.36  Aligned_cols=145  Identities=15%  Similarity=0.198  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-----
Q 048710           49 NKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-----  105 (208)
                      .++.+|+.++.++.                 ...+..++||||+++|+|.++++... ....+++.....++.++     
T Consensus        59 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~  138 (286)
T cd06638          59 EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ  138 (286)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence            56888999888873                 13456899999999999999986421 11257777666666555     


Q ss_pred             -------------------C-------CC---------CccccccccCCcCccCcccccc-----CCCCcce--------
Q 048710          106 -------------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS--------  137 (208)
Q Consensus       106 -------------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks--------  137 (208)
                                         .       .+         .........|+..|+|||.+..     ..++.++        
T Consensus       139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi  218 (286)
T cd06638         139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT  218 (286)
T ss_pred             HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence                               0       00         0011123458899999998753     3455666        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++||+.|+.....     . ..+.. ...+......++.       .....+..++.+||+.+ ++|||+
T Consensus       219 ~~el~~g~~p~~~~~~-----~-~~~~~-~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~  277 (286)
T cd06638         219 AIELGDGDPPLADLHP-----M-RALFK-IPRNPPPTLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTV  277 (286)
T ss_pred             HHHHhcCCCCCCCCch-----h-HHHhh-ccccCCCcccCCC-------CcCHHHHHHHHHHccCCcccCCCH
Confidence              99999999874321     0 00111 1111111111111       11235677888999999 999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.19  E-value=1.8e-10  Score=89.23  Aligned_cols=150  Identities=13%  Similarity=0.142  Sum_probs=89.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-CCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-EFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~l~~~~r~~i~~~i---------  105 (208)
                      ....|.+|+.++..++           ......++||||+++|+|.+++++... ...+++.....++.++         
T Consensus        38 ~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~  117 (268)
T cd05086          38 EQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK  117 (268)
T ss_pred             HHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999998877           556778999999999999999986432 1134554444444444         


Q ss_pred             ------------------------CCCCc---------cccccccCCcCccCccccccC-------CCCcce--------
Q 048710          106 ------------------------LADQT---------YMTTQVQGTFGYLDLQYFQSS-------PFTEKS--------  137 (208)
Q Consensus       106 ------------------------~~~~~---------~~~~~~~gt~~y~aPE~~~~~-------~~~~ks--------  137 (208)
                                              +-+..         .......|+..|+|||+..+.       .++.++        
T Consensus       118 ~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  197 (268)
T cd05086         118 HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT  197 (268)
T ss_pred             CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence                                    00000         001233567899999987532       234445        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                        |+++ |..|+....      ..+...... .+......++.+....+    ..+.++...|| .+ ++||+++
T Consensus       198 l~el~~~~~~p~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~  260 (268)
T cd05086         198 LWELFENAAQPYSHLS------DREVLNHVI-KDQQVKLFKPQLELPYS----ERWYEVLQFCW-LSPEKRATAE  260 (268)
T ss_pred             HHHHHhCCCCCCCCCC------HHHHHHHHH-hhcccccCCCccCCCCc----HHHHHHHHHHh-hCcccCCCHH
Confidence              8887 566775321      122222222 22333445555543333    24455667899 67 9999973

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.19  E-value=8e-11  Score=90.52  Aligned_cols=143  Identities=16%  Similarity=0.201  Sum_probs=96.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|++++.+++           ...+..|+|+||+++|+|.+++.+..   .+++..+..++.++          
T Consensus        36 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~  112 (265)
T cd05579          36 QVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSN  112 (265)
T ss_pred             HHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc
Confidence            3467889999999887           56788999999999999999998644   57888888888777          


Q ss_pred             --------------CCCC------------------------ccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------LADQ------------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                    ..+.                        ........++..|++||...+...+.++          
T Consensus       113 ~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~  192 (265)
T cd05579         113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILY  192 (265)
T ss_pred             CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHH
Confidence                          0000                        0011234577899999999877777777          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||..||.....      ..... ....+....      ....  .....+..+..+||+.+ ++||++
T Consensus       193 ~l~~g~~p~~~~~~------~~~~~-~~~~~~~~~------~~~~--~~~~~~~~~i~~~l~~~p~~Rpt~  248 (265)
T cd05579         193 EFLVGIPPFHGETP------EEIFQ-NILNGKIEW------PEDV--EVSDEAIDLISKLLVPDPEKRLGA  248 (265)
T ss_pred             HHHhCCCCCCCCCH------HHHHH-HHhcCCcCC------Cccc--cCCHHHHHHHHHHhcCCHhhcCCC
Confidence            99999999874321      11111 111121110      0000  11345667888999999 999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.18  E-value=4.5e-11  Score=99.05  Aligned_cols=147  Identities=13%  Similarity=0.240  Sum_probs=102.0

Q ss_pred             cchhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           43 IYEGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      -++...+.|..|+.+|..|+             ..+...-+|.|.+..|+|..|+.+.+.   .+-....+|+.+|    
T Consensus        80 q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL  156 (632)
T KOG0584|consen   80 QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGL  156 (632)
T ss_pred             cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHh
Confidence            34455689999999999998             455668899999999999999987653   4444444555555    


Q ss_pred             --------------------------------CCC-----CccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 --------------------------------LAD-----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 --------------------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                      +++     ....+..+.||+-|||||... ..|++..          |
T Consensus       157 ~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLE  235 (632)
T KOG0584|consen  157 VYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLE  235 (632)
T ss_pred             hhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHH
Confidence                                            111     122344689999999999875 6677766          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCCCCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~~~RPsm  207 (208)
                      |+|+..||....      -++.++..+..|.-+..+...     ...++.   +++..|+...++|||.
T Consensus       236 MvT~eYPYsEC~------n~AQIYKKV~SGiKP~sl~kV-----~dPevr---~fIekCl~~~~~R~sa  290 (632)
T KOG0584|consen  236 MVTSEYPYSECT------NPAQIYKKVTSGIKPAALSKV-----KDPEVR---EFIEKCLATKSERLSA  290 (632)
T ss_pred             HHhccCChhhhC------CHHHHHHHHHcCCCHHHhhcc-----CCHHHH---HHHHHHhcCchhccCH
Confidence            999999999653      345677777666443333321     112333   5555999888888873

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.18  E-value=1.3e-10  Score=89.70  Aligned_cols=98  Identities=16%  Similarity=0.232  Sum_probs=72.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------c--CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-----------L--ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~--~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ..+.|.+|+.++.+++           .  ....+++|+||+++|+|.+++.+..   .+++....+++.++        
T Consensus        47 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH  123 (265)
T cd06652          47 EVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLH  123 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999987           1  2356889999999999999997543   46777777777766        


Q ss_pred             ----------------C-------CCC--c----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------L-------ADQ--T----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~-------~~~--~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      .       .+.  .          .......|+..|+|||...+..++.++          |++
T Consensus       124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  203 (265)
T cd06652         124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML  203 (265)
T ss_pred             hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence                            0       000  0          011234588899999999887787777          999


Q ss_pred             cCCCCCC
Q 048710          141 TKEKPIC  147 (208)
Q Consensus       141 tg~~p~~  147 (208)
                      +|+.|+.
T Consensus       204 ~g~~p~~  210 (265)
T cd06652         204 TEKPPWA  210 (265)
T ss_pred             hCCCCCC
Confidence            9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.18  E-value=7.6e-11  Score=95.11  Aligned_cols=141  Identities=10%  Similarity=0.062  Sum_probs=84.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++.+++           ...+..++|+||+++|+|.+...       ..+.....++.++          
T Consensus       115 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-------~~~~~~~~i~~qi~~aL~~LH~~  187 (353)
T PLN00034        115 VRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-------ADEQFLADVARQILSGIAYLHRR  187 (353)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccccc-------CCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999987           66778999999999999976432       3334444444444          


Q ss_pred             -----------------------CCCC-------ccccccccCCcCccCccccccC-----CCCcce----------eEe
Q 048710          106 -----------------------LADQ-------TYMTTQVQGTFGYLDLQYFQSS-----PFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------~~~~-------~~~~~~~~gt~~y~aPE~~~~~-----~~~~ks----------E~~  140 (208)
                                             +-+.       ........||..|+|||.+...     ..+.++          |++
T Consensus       188 ~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~  267 (353)
T PLN00034        188 HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY  267 (353)
T ss_pred             CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH
Confidence                                   0000       0011245689999999987532     122344          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +|+.||......   .......... ....     +..    +......+.+++.+||+.+ ++||++
T Consensus       268 ~g~~pf~~~~~~---~~~~~~~~~~-~~~~-----~~~----~~~~~~~l~~li~~~l~~~P~~Rpt~  322 (353)
T PLN00034        268 LGRFPFGVGRQG---DWASLMCAIC-MSQP-----PEA----PATASREFRHFISCCLQREPAKRWSA  322 (353)
T ss_pred             hCCCCCCCCCCc---cHHHHHHHHh-ccCC-----CCC----CCccCHHHHHHHHHHccCChhhCcCH
Confidence            999999732211   1111111111 1110     111    1122335667888999999 999986

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.18  E-value=1.8e-10  Score=88.98  Aligned_cols=145  Identities=13%  Similarity=0.158  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++..++           ...+..++|+||+++|+|.+++....   .+++.+...++.++           
T Consensus        50 ~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~  126 (267)
T cd06645          50 FAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG  126 (267)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356888999999887           56788999999999999999987543   47777777776666           


Q ss_pred             -------------C-------CC---------CccccccccCCcCccCccccc---cCCCCcce----------eEecCC
Q 048710          106 -------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~  143 (208)
                                   .       .+         .........||..|+|||++.   ...++.++          |+++|.
T Consensus       127 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~  206 (267)
T cd06645         127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC
Confidence                         0       00         000112345889999999874   44566666          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....+..      .+.... ....   ..+.....  ......+.+++.+||+.+ ++||++
T Consensus       207 ~p~~~~~~~~------~~~~~~-~~~~---~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~  259 (267)
T cd06645         207 PPMFDLHPMR------ALFLMT-KSNF---QPPKLKDK--MKWSNSFHHFVKMALTKNPKKRPTA  259 (267)
T ss_pred             CCcccccchh------hHHhhh-ccCC---CCCccccc--CCCCHHHHHHHHHHccCCchhCcCH
Confidence            9986322110      011111 1111   01111100  011234567788999999 999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.18  E-value=2.2e-10  Score=88.35  Aligned_cols=150  Identities=14%  Similarity=0.186  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------C
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------L  106 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------~  106 (208)
                      ....+|.+|++++.+++           ...+..++|+||+++++|.+++.....  .++......++.++        .
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          41 AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQG--RIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHcC
Confidence            44567999999999887           566889999999999999999986532  46666666666655        0


Q ss_pred             -CC----------------C---------c-----cccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          107 -AD----------------Q---------T-----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       107 -~~----------------~---------~-----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                       .+                .         .     .......|+..|++||...+..++.++          |++||+.|
T Consensus       119 ~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  198 (265)
T cd06605         119 KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP  198 (265)
T ss_pred             CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence             00                0         0     000124578899999999888888877          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +..... ........+..... ...     +.+...   .....+.+++..||..+ ++|||+
T Consensus       199 ~~~~~~-~~~~~~~~~~~~~~-~~~-----~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~  251 (265)
T cd06605         199 YPPEND-PPDGIFELLQYIVN-EPP-----PRLPSG---KFSPDFQDFVNLCLIKDPRERPSY  251 (265)
T ss_pred             CCcccc-ccccHHHHHHHHhc-CCC-----CCCChh---hcCHHHHHHHHHHcCCCchhCcCH
Confidence            874311 11122222222221 111     111111   13344667888999999 999996

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.18  E-value=1.1e-10  Score=92.73  Aligned_cols=143  Identities=16%  Similarity=0.210  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+|.+|++++.+++           .+.+..++|+||++ |+|.+.+.....  .++|.++..++.++          
T Consensus        68 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~  144 (317)
T cd06635          68 KWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH  144 (317)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999987           56778899999997 588888765433  58899888877776          


Q ss_pred             --------------CC-------CC-----ccccccccCCcCccCccccc---cCCCCcce----------eEecCCCCC
Q 048710          106 --------------LA-------DQ-----TYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~-------~~-----~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..       +.     ........|+..|+|||++.   ++.++.++          |+++|+.|+
T Consensus       145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~  224 (317)
T cd06635         145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  224 (317)
T ss_pred             CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence                          00       00     00112345788999999974   45566666          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ......... .+....        .........+.+++.+||+.+ .+||++
T Consensus       225 ~~~~------~~~~~~~~~-~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~  271 (317)
T cd06635         225 FNMN------AMSALYHIA-QNESPT--------LQSNEWSDYFRNFVDSCLQKIPQDRPTS  271 (317)
T ss_pred             CCcc------HHHHHHHHH-hccCCC--------CCCccccHHHHHHHHHHccCCcccCcCH
Confidence            6321      111111111 111110        001122234567778999999 999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.18  E-value=2.5e-10  Score=91.06  Aligned_cols=125  Identities=13%  Similarity=0.171  Sum_probs=80.2

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------------------------------CCC-
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------------------------------LAD-  108 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------------------------------~~~-  108 (208)
                      ...+..|+||||+++|+|.+++....   .+.......++.++                                 +-+ 
T Consensus        66 ~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~  142 (325)
T cd05602          66 QTADKLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL  142 (325)
T ss_pred             EcCCeEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCC
Confidence            66788999999999999999998643   35555554455544                                 000 


Q ss_pred             ------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccc
Q 048710          109 ------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFE  172 (208)
Q Consensus       109 ------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  172 (208)
                            .........||+.|+|||++.+..++.++          |+++|..||....      ......... ....  
T Consensus       143 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~-~~~~--  213 (325)
T cd05602         143 CKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNIL-NKPL--  213 (325)
T ss_pred             CcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHHH-hCCc--
Confidence                  01112345689999999999988888887          9999999997432      111112221 1111  


Q ss_pred             cccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          173 IFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       173 ~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .+++        .....+.++...|++.+ .+||+.
T Consensus       214 ~~~~--------~~~~~~~~li~~~l~~~p~~R~~~  241 (325)
T cd05602         214 QLKP--------NITNSARHLLEGLLQKDRTKRLGA  241 (325)
T ss_pred             CCCC--------CCCHHHHHHHHHHcccCHHHCCCC
Confidence            0111        11224456667999999 999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.18  E-value=1.2e-10  Score=94.32  Aligned_cols=138  Identities=14%  Similarity=0.242  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ....+|+.++++++            ...+..|+||||+.+|+|.+++.+.+   .+.....-.+..|+           
T Consensus        64 ~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~g  140 (370)
T KOG0583|consen   64 ELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSRG  140 (370)
T ss_pred             hhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCC
Confidence            34557999999888            66677999999999999999999843   35555554555555           


Q ss_pred             -----------------------------CC-CCccccccccCCcCccCccccccCC-CCcce-----------eEecCC
Q 048710          106 -----------------------------LA-DQTYMTTQVQGTFGYLDLQYFQSSP-FTEKS-----------NLLTKE  143 (208)
Q Consensus       106 -----------------------------~~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks-----------E~~tg~  143 (208)
                                                   .. .........+||+.|+|||++++.. |+.+.           -|++|.
T Consensus       141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence                                         00 1122345778999999999999977 88655           899999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcC--cccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKED--RLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||...      ....... .+..+  .++..++           ...+..|..+|+..+ .+|+++
T Consensus       221 ~PF~d~------~~~~l~~-ki~~~~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~  269 (370)
T KOG0583|consen  221 LPFDDS------NVPNLYR-KIRKGEFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITL  269 (370)
T ss_pred             CCCCCc------cHHHHHH-HHhcCCccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCH
Confidence            999842      1222222 23333  2222221           334567777999999 999985

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.18  E-value=2.4e-10  Score=87.30  Aligned_cols=141  Identities=21%  Similarity=0.225  Sum_probs=95.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+..|+.++.+++           ...+..++||||+++++|.+++....   .+++.....++.++          
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~  112 (250)
T cd05123          36 EVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL  112 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999887           67788999999999999999998653   47777777766666          


Q ss_pred             --------------CCC---------Cc-------cccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LAD---------QT-------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~~---------~~-------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..+         ..       .......|+.+|++||...+...+.++          |+++|..|
T Consensus       113 ~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  192 (250)
T cd05123         113 GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP  192 (250)
T ss_pred             CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                          000         00       112234578899999999887777766          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      ........ .+..          ..+......+.+++.+||..+ ++||++
T Consensus       193 ~~~~~~------~~~~~~~~-~~~~----------~~~~~~~~~l~~~i~~~l~~~p~~R~~~  238 (250)
T cd05123         193 FYAEDR------KEIYEKIL-KDPL----------RFPEFLSPEARDLISGLLQKDPTKRLGS  238 (250)
T ss_pred             CCCCCH------HHHHHHHh-cCCC----------CCCCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence            873311      11111111 1111          111112345567888999999 999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.17  E-value=9e-11  Score=90.38  Aligned_cols=144  Identities=13%  Similarity=0.158  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++..|+.++.+++           .+.+..++|+||+++++|.+++.... ....+++.....++.++          
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (260)
T cd08222          46 TVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR  125 (260)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc
Confidence            346778888888887           66678999999999999999987521 12268898888777776          


Q ss_pred             --------------C------CC---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 --------------L------AD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~------~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                    .      .+         .........|+..|++||...+..++.++          |+++|..|+
T Consensus       126 ~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~  205 (260)
T cd08222         126 RILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAF  205 (260)
T ss_pred             CccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                          0      00         00111234578899999998877777777          899999997


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...      ......... ..+..     +.+    +......+.+++.+||+.+ ++||++
T Consensus       206 ~~~------~~~~~~~~~-~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (260)
T cd08222         206 EGQ------NFLSVVLRI-VEGPT-----PSL----PETYSRQLNSIMQSMLNKDPSLRPSA  251 (260)
T ss_pred             CCc------cHHHHHHHH-HcCCC-----CCC----cchhcHHHHHHHHHHhcCChhhCcCH
Confidence            622      111222221 12211     111    1223345667888999999 999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.17  E-value=2.4e-10  Score=89.54  Aligned_cols=145  Identities=14%  Similarity=0.174  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHhhcc------------c-----CCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-----
Q 048710           49 NKLINEVVILSQIN------------L-----ETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~-----~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-----  105 (208)
                      ..+.+|+.++.++.            .     ..+..++|+||+++|+|.++++... ....++|.....++.++     
T Consensus        63 ~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~  142 (291)
T cd06639          63 EEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ  142 (291)
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence            46778898988873            1     1246899999999999999986421 12257888888877776     


Q ss_pred             -------------------CC-------C---------CccccccccCCcCccCccccccCC-----CCcce--------
Q 048710          106 -------------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSP-----FTEKS--------  137 (208)
Q Consensus       106 -------------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~-----~~~ks--------  137 (208)
                                         ..       +         .........|+..|+|||.+....     ++.++        
T Consensus       143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi  222 (291)
T cd06639         143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT  222 (291)
T ss_pred             HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence                               00       0         001112345788999999976432     45666        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++||+.|+.....      ...+.. ...+....+.++       ......+.+++.+||+.+ ++||++
T Consensus       223 ~~el~~g~~p~~~~~~------~~~~~~-~~~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~  281 (291)
T cd06639         223 AIELGDGDPPLFDMHP------VKTLFK-IPRNPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSV  281 (291)
T ss_pred             HHHHhhCCCCCCCCcH------HHHHHH-HhcCCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCH
Confidence              99999999874311      111111 111211111111       122345678888999999 999997

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.16  E-value=1.3e-10  Score=91.86  Aligned_cols=144  Identities=15%  Similarity=0.216  Sum_probs=93.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+|.+|+.++.+++           .+.+..++|+||++ |+|.+++.....  .+++.....++.++          
T Consensus        58 ~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~  134 (307)
T cd06607          58 KWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSH  134 (307)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467899999999998           56678899999997 678887765433  58898888887777          


Q ss_pred             --------------CCCC---------c---cccccccCCcCccCccccc---cCCCCcce----------eEecCCCCC
Q 048710          106 --------------LADQ---------T---YMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~~~---------~---~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..+.         .   .......|+..|+|||.+.   .+.++.++          |++||..|+
T Consensus       135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~  214 (307)
T cd06607         135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  214 (307)
T ss_pred             CceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCC
Confidence                          0000         0   0012345788999999874   35566666          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ....      ....... ...+..     +.+.   +......+.++..+||+.+ ++||+|.
T Consensus       215 ~~~~------~~~~~~~-~~~~~~-----~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~  262 (307)
T cd06607         215 FNMN------AMSALYH-IAQNDS-----PTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSE  262 (307)
T ss_pred             CCcc------HHHHHHH-HhcCCC-----CCCC---chhhCHHHHHHHHHHhcCChhhCcCHH
Confidence            6331      1111111 111111     1111   1123345677888999999 9999973

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.16  E-value=2e-10  Score=93.70  Aligned_cols=107  Identities=17%  Similarity=0.360  Sum_probs=77.4

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHH--HHHHHhC---
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQ--LHIVVDS---  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r--~~i~~~i---  105 (208)
                      +....+......|-.+|...+           .+.+.+||||||.+||++.++|.+.+-. .-+|.+-  ..++..|   
T Consensus       179 M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L-~e~~arfYiaE~vlAI~~i  257 (550)
T KOG0605|consen  179 MLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTL-TEDWARFYIAETVLAIESI  257 (550)
T ss_pred             HHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcC-chHHHHHHHHHHHHHHHHH
Confidence            444455667788888998866           8999999999999999999999876532 2334321  1233333   


Q ss_pred             ---------------------------------------------------------CCC--------------------
Q 048710          106 ---------------------------------------------------------LAD--------------------  108 (208)
Q Consensus       106 ---------------------------------------------------------~~~--------------------  108 (208)
                                                                               ..+                    
T Consensus       258 H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w  337 (550)
T KOG0605|consen  258 HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW  337 (550)
T ss_pred             HHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence                                                                     000                    


Q ss_pred             ---CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          109 ---QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       109 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                         ....+...+||+-|||||++.+..|+..+          |++.|-.||...
T Consensus       338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~  391 (550)
T KOG0605|consen  338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSE  391 (550)
T ss_pred             HhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence               01112357899999999999999999888          999999999854

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.16  E-value=2.6e-10  Score=92.66  Aligned_cols=97  Identities=16%  Similarity=0.273  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|..|+.++..++           .+.+..|+||||+++|+|.+++.+..    ++......++.++           
T Consensus        87 ~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~----l~~~~~~~~~~qi~~aL~~LH~~~  162 (370)
T cd05596          87 SAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD----IPEKWARFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345789999999987           66778999999999999999997642    4444443333333           


Q ss_pred             ----------------------C--------CCCccccccccCCcCccCccccccC----CCCcce----------eEec
Q 048710          106 ----------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSS----PFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~ks----------E~~t  141 (208)
                                            +        ...........||+.|+|||.+.+.    .++.++          |++|
T Consensus       163 ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt  242 (370)
T cd05596         163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (370)
T ss_pred             eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence                                  0        0001112345689999999998653    356666          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       243 G~~Pf~~  249 (370)
T cd05596         243 GDTPFYA  249 (370)
T ss_pred             CCCCcCC
Confidence            9999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.16  E-value=8.1e-11  Score=92.51  Aligned_cols=143  Identities=16%  Similarity=0.215  Sum_probs=93.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           ...+..++||||+++++|.+++...    .+++.....++.++          
T Consensus        60 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~  135 (292)
T cd06657          60 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ  135 (292)
T ss_pred             HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457999999999987           5678899999999999999988643    47787777777766          


Q ss_pred             --------------CC-------C---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 --------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 --------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                    ..       +         .........|+.+|++||...+..++.++          |++||..|
T Consensus       136 givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p  215 (292)
T cd06657         136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  215 (292)
T ss_pred             CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                          00       0         00011224578899999999887888877          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....      ...+. ....+ ..    +.+...  ......+.++..+||+.+ ++||++
T Consensus       216 ~~~~~~------~~~~~-~~~~~-~~----~~~~~~--~~~~~~l~~li~~~l~~~P~~R~~~  264 (292)
T cd06657         216 YFNEPP------LKAMK-MIRDN-LP----PKLKNL--HKVSPSLKGFLDRLLVRDPAQRATA  264 (292)
T ss_pred             CCCCCH------HHHHH-HHHhh-CC----cccCCc--ccCCHHHHHHHHHHHhCCcccCcCH
Confidence            873211      11111 11111 11    111000  011223456777999999 999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.16  E-value=2.2e-10  Score=88.50  Aligned_cols=144  Identities=13%  Similarity=0.184  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....|.+|+.++.+++             .+.+..++|+||+++++|.+++.+..   .+++.....++.++       
T Consensus        46 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~L  122 (264)
T cd06653          46 KEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYL  122 (264)
T ss_pred             HHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHH
Confidence            34568999999999998             22356889999999999999997643   46777776666666       


Q ss_pred             -----------------CCCC---------c----------cccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 -----------------LADQ---------T----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 -----------------~~~~---------~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                       ..+.         .          .......|+..|+|||...+..++.++          |+
T Consensus       123 H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  202 (264)
T cd06653         123 HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM  202 (264)
T ss_pred             HhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHH
Confidence                             0000         0          001234578999999999888788777          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCCCCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~~~RPsm  207 (208)
                      +||+.||....      ....+.+....+ ..    +.+    +......+.++..+||+..++||+-
T Consensus       203 ~~g~~p~~~~~------~~~~~~~~~~~~-~~----~~~----p~~~~~~~~~~i~~~l~~~~~r~~~  255 (264)
T cd06653         203 LTEKPPWAEYE------AMAAIFKIATQP-TK----PML----PDGVSDACRDFLKQIFVEEKRRPTA  255 (264)
T ss_pred             HhCCCCCCccC------HHHHHHHHHcCC-CC----CCC----CcccCHHHHHHHHHHhcCcccCccH
Confidence            99999987321      111112111111 11    111    2222234556666999944889973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.15  E-value=3.3e-10  Score=100.60  Aligned_cols=147  Identities=18%  Similarity=0.222  Sum_probs=94.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-----
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-----  105 (208)
                      ......|..|+.++.+++             ...+.+||||||+++|+|.++|.... ....+++.....|+.+|     
T Consensus        53 e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALa  132 (1021)
T PTZ00266         53 EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALA  132 (1021)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            344567999999999998             23456899999999999999997532 11257777777666655     


Q ss_pred             ---CCC----------------C---------------------------------------ccccccccCCcCccCccc
Q 048710          106 ---LAD----------------Q---------------------------------------TYMTTQVQGTFGYLDLQY  127 (208)
Q Consensus       106 ---~~~----------------~---------------------------------------~~~~~~~~gt~~y~aPE~  127 (208)
                         ...                +                                       ........||+.|+|||+
T Consensus       133 YLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEv  212 (1021)
T PTZ00266        133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPEL  212 (1021)
T ss_pred             HHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHH
Confidence               000                0                                       000123468999999999


Q ss_pred             ccc--CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHH
Q 048710          128 FQS--SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKK  195 (208)
Q Consensus       128 ~~~--~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~  195 (208)
                      +.+  ..++.++          |++||+.||....     .+...+. .+..+.       .+...   .....+.+++.
T Consensus       213 L~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-----~~~qli~-~lk~~p-------~lpi~---~~S~eL~dLI~  276 (1021)
T PTZ00266        213 LLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-----NFSQLIS-ELKRGP-------DLPIK---GKSKELNILIK  276 (1021)
T ss_pred             HhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-----cHHHHHH-HHhcCC-------CCCcC---CCCHHHHHHHH
Confidence            854  4577777          9999999997321     1222222 222211       11101   11234667788


Q ss_pred             HhhcCC-CCCCCC
Q 048710          196 RCLNLN-EKKPTM  207 (208)
Q Consensus       196 ~C~~~~-~~RPsm  207 (208)
                      .||+.+ .+||++
T Consensus       277 ~~L~~dPeeRPSa  289 (1021)
T PTZ00266        277 NLLNLSAKERPSA  289 (1021)
T ss_pred             HHhcCChhHCcCH
Confidence            999999 999985

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.14  E-value=1.3e-10  Score=88.44  Aligned_cols=145  Identities=21%  Similarity=0.302  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++.+++           ...+..++++||+++++|.+++.....  .+++.....++.++          
T Consensus        40 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~  117 (253)
T cd05122          40 KKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQ--TLTESQIAYVCKELLKGLEYLHSN  117 (253)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhcC
Confidence            4568999999999988           556889999999999999999987532  58888888887776          


Q ss_pred             --------------CCCC---------c----cc--cccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 --------------LADQ---------T----YM--TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~~~---------~----~~--~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..+.         .    ..  .....|+..|++||...+..++.++          |+++|..|+
T Consensus       118 ~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  197 (253)
T cd05122         118 GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY  197 (253)
T ss_pred             CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence                          0000         0    00  1344578899999999887777777          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ......... ........+     .  ......+.++..+||+.+ ++|||+
T Consensus       198 ~~~~------~~~~~~~~~-~~~~~~~~~-----~--~~~~~~~~~~i~~~l~~~p~~R~t~  245 (253)
T cd05122         198 SELP------PMKALFKIA-TNGPPGLRN-----P--EKWSDEFKDFLKKCLQKNPEKRPTA  245 (253)
T ss_pred             CCCc------hHHHHHHHH-hcCCCCcCc-----c--cccCHHHHHHHHHHccCChhhCCCH
Confidence            7321      111111111 111111111     1  111335667777999999 999996

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.14  E-value=2.3e-10  Score=89.23  Aligned_cols=98  Identities=12%  Similarity=0.146  Sum_probs=72.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           ...+..++|+||+ +++|.+++.+...  .+++.+...++.++          
T Consensus        42 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~  118 (286)
T cd07832          42 IPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHAN  118 (286)
T ss_pred             hhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467999999999987           5677899999999 9999999976543  58888888888777          


Q ss_pred             --------------CC-----------------CCccccccccCCcCccCccccccC-CCCcce----------eEecCC
Q 048710          106 --------------LA-----------------DQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~~-----------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~  143 (208)
                                    ..                 ..........|+..|+|||.+.+. .++.++          |++||.
T Consensus       119 ~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~  198 (286)
T cd07832         119 GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS  198 (286)
T ss_pred             CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCC
Confidence                          00                 000012234578899999998654 346666          999997


Q ss_pred             CCCC
Q 048710          144 KPIC  147 (208)
Q Consensus       144 ~p~~  147 (208)
                      .|+.
T Consensus       199 ~~~~  202 (286)
T cd07832         199 PLFP  202 (286)
T ss_pred             cCcC
Confidence            7765

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.14  E-value=4e-10  Score=87.98  Aligned_cols=127  Identities=12%  Similarity=0.141  Sum_probs=81.4

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CC-------C---
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LA-------D---  108 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~-------~---  108 (208)
                      ...+..++||||+++|+|.+++....   .++|.....++.++                        ..       +   
T Consensus        67 ~~~~~~~lv~e~~~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~  143 (279)
T cd05633          67 HTPDKLCFILDLMNGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL  143 (279)
T ss_pred             ecCCeEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCc
Confidence            45678999999999999999997643   58898888887776                        00       0   


Q ss_pred             ----CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccc
Q 048710          109 ----QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI  173 (208)
Q Consensus       109 ----~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  173 (208)
                          .........||..|+|||...+ ..++.++          |++||..||.......    ...+......      
T Consensus       144 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~------  213 (279)
T cd05633         144 ACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLT------  213 (279)
T ss_pred             ceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhhc------
Confidence                0001123458999999999864 5567776          9999999987432111    1111111110      


Q ss_pred             ccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          174 FDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       174 ~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .+..+.    ......+.++...||+.+ ++||+
T Consensus       214 ~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         214 VNVELP----DSFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             CCcCCc----cccCHHHHHHHHHHhcCCHHHhcC
Confidence            111121    222335567777999999 99995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.14  E-value=6.6e-10  Score=88.72  Aligned_cols=58  Identities=17%  Similarity=0.233  Sum_probs=45.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ..+.|.+|+.++..++           ...+..++|+||+++|+|.+++.+.... .+++.....++.++
T Consensus        42 ~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi  110 (328)
T cd08226          42 HLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPE-GMSEALIGNILFGA  110 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhccc-CCCHHHHHHHHHHH
Confidence            3467899999988777           5677899999999999999999865332 47777766666666

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.13  E-value=3.4e-10  Score=91.72  Aligned_cols=98  Identities=17%  Similarity=0.304  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+..|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++           
T Consensus        45 ~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g  121 (363)
T cd05628          45 VGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLG  121 (363)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356888999999887           66778999999999999999998643   47777776666665           


Q ss_pred             ----------------------CCCCcc------------------------------------------ccccccCCcC
Q 048710          106 ----------------------LADQTY------------------------------------------MTTQVQGTFG  121 (208)
Q Consensus       106 ----------------------~~~~~~------------------------------------------~~~~~~gt~~  121 (208)
                                            +-+...                                          ......||+.
T Consensus       122 ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~  201 (363)
T cd05628         122 FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPD  201 (363)
T ss_pred             eEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcc
Confidence                                  000000                                          0123579999


Q ss_pred             ccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          122 YLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       122 y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                      |+|||++.+..++.++          |++||+.||..
T Consensus       202 Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             ccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            9999999988888888          99999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=7.7e-11  Score=98.62  Aligned_cols=103  Identities=19%  Similarity=0.258  Sum_probs=77.1

Q ss_pred             ccchhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           42 LIYEGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      .......+....|.+|+..++            ..++++|+||||+.||++.-+.+..    .++..+..=+|..|    
T Consensus       406 Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L  481 (694)
T KOG0694|consen  406 ILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGL  481 (694)
T ss_pred             eeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHH
Confidence            344556678889999988777            8899999999999999955555432    35555433333333    


Q ss_pred             ------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                          .......+++.+||+-|||||++++..|+...          ||
T Consensus       482 ~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM  561 (694)
T KOG0694|consen  482 QFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM  561 (694)
T ss_pred             HHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHH
Confidence                                                12233356788999999999999999999988          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      ++|..||..
T Consensus       562 L~Gq~PF~g  570 (694)
T KOG0694|consen  562 LVGESPFPG  570 (694)
T ss_pred             HcCCCCCCC
Confidence            999999984

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.13  E-value=9.9e-11  Score=91.62  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHhhcc-------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++..++                   ......++|+||++ |+|.+++...... .+++.....++.++    
T Consensus        46 ~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL  123 (290)
T cd07862          46 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGL  123 (290)
T ss_pred             HHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHH
Confidence            45677888877663                   13456899999997 7999999764332 57888888888777    


Q ss_pred             --------------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          ..       |        .........||+.|+|||.+.+..++.++          |++
T Consensus       124 ~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  203 (290)
T cd07862         124 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  203 (290)
T ss_pred             HHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHH
Confidence                                00       0        01112345689999999999888888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       204 ~g~~~f~~  211 (290)
T cd07862         204 RRKPLFRG  211 (290)
T ss_pred             cCCCCcCC
Confidence            99999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.13  E-value=5.4e-10  Score=90.42  Aligned_cols=98  Identities=18%  Similarity=0.336  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+..|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .++......++.++           
T Consensus        45 ~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          45 VAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456888999999887           67788999999999999999998643   46666666555555           


Q ss_pred             -------------CC---------CCc------------------------------------------cccccccCCcC
Q 048710          106 -------------LA---------DQT------------------------------------------YMTTQVQGTFG  121 (208)
Q Consensus       106 -------------~~---------~~~------------------------------------------~~~~~~~gt~~  121 (208)
                                   ..         +..                                          .......||+.
T Consensus       122 ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  201 (360)
T cd05627         122 FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD  201 (360)
T ss_pred             eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcc
Confidence                         00         000                                          00113469999


Q ss_pred             ccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          122 YLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       122 y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                      |+|||++.+..++.++          |++||+.||..
T Consensus       202 Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             ccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            9999999988888888          99999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.13  E-value=5.6e-10  Score=87.03  Aligned_cols=98  Identities=14%  Similarity=0.213  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|.+|++++.+++           .+.+..++|+||+. ++|.+++...... .+++.....++.++            
T Consensus        44 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~~~i  121 (284)
T cd07860          44 STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHSHRV  121 (284)
T ss_pred             hHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            57899999999998           67788999999996 7899999765433 58888887777766            


Q ss_pred             ------------CCCC----------------ccccccccCCcCccCccccccCC-CCcce----------eEecCCCCC
Q 048710          106 ------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~tg~~p~  146 (208)
                                  ..+.                ........++..|+|||.+.+.. ++.++          |++||+.|+
T Consensus       122 ~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~  201 (284)
T cd07860         122 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF  201 (284)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                        0000                00112234678899999887644 46666          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       202 ~~  203 (284)
T cd07860         202 PG  203 (284)
T ss_pred             CC
Confidence            63

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.12  E-value=2.4e-10  Score=88.62  Aligned_cols=128  Identities=15%  Similarity=0.204  Sum_probs=84.0

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CCCC-c-------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LADQ-T-------  110 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~~~-~-------  110 (208)
                      ...+..++||||+++|+|.+++....   .++|.+...++.++                        ..+. .       
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg  155 (267)
T PHA03390         79 TTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYG  155 (267)
T ss_pred             ecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence            56778999999999999999998653   58899888888777                        0111 0       


Q ss_pred             -----cccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccccc
Q 048710          111 -----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFD  175 (208)
Q Consensus       111 -----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  175 (208)
                           .......|+..|+|||++.+..++.++          |++||..||..... ....+..+....  ....     
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~--~~~~-----  227 (267)
T PHA03390        156 LCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQ--QKKL-----  227 (267)
T ss_pred             cceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhh--cccC-----
Confidence                 001123578999999999988888887          99999999974321 111121111111  1100     


Q ss_pred             ccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          176 GLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       176 ~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                           .........+.++...||+.+ .+||+
T Consensus       228 -----~~~~~~~~~~~~li~~~l~~~p~~R~~  254 (267)
T PHA03390        228 -----PFIKNVSKNANDFVQSMLKYNINYRLT  254 (267)
T ss_pred             -----CcccccCHHHHHHHHHHhccChhhCCc
Confidence                 001122234567777999999 99995

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.12  E-value=1.7e-10  Score=89.99  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++|+||++ |+|.+++........+++.....++.++           
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          43 PSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             hHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457889999999888           66788999999998 7999998764332368888877777766           


Q ss_pred             -------------CCCC----------------ccccccccCCcCccCccccccC-CCCcce----------eEecCCCC
Q 048710          106 -------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p  145 (208)
                                   ..+.                ........+++.|+|||.+.+. .++.++          |++||+.|
T Consensus       122 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~  201 (285)
T cd07861         122 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPL  201 (285)
T ss_pred             eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCC
Confidence                         0000                0001223468899999988653 456666          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      +..
T Consensus       202 ~~~  204 (285)
T cd07861         202 FHG  204 (285)
T ss_pred             CCC
Confidence            873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=3.6e-10  Score=87.44  Aligned_cols=147  Identities=16%  Similarity=0.230  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHhhcc------------c------CCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC--
Q 048710           47 KVNKLINEVVILSQIN------------L------ETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~------~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i--  105 (208)
                      ...+|.+|+.++.++.            .      ..+..++|+||+++++|.+++.... ....+++.....++.++  
T Consensus        45 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~  124 (275)
T cd06608          45 EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR  124 (275)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence            3467999999999874            1      1345899999999999999987532 11257888777777766  


Q ss_pred             ----------------------CCC----------------CccccccccCCcCccCcccccc-----CCCCcce-----
Q 048710          106 ----------------------LAD----------------QTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS-----  137 (208)
Q Consensus       106 ----------------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks-----  137 (208)
                                            ..+                .........|+..|+|||.+..     ..++.++     
T Consensus       125 al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  204 (275)
T cd06608         125 GLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSL  204 (275)
T ss_pred             HHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHh
Confidence                                  000                0011123447889999998753     2345555     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++||..|+.....      ...... ...+...     .+  ..+......+.+++.+||+.+ ++|||+
T Consensus       205 G~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~-----~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~  266 (275)
T cd06608         205 GITAIELADGKPPLCDMHP------MRALFK-IPRNPPP-----TL--KSPENWSKKFNDFISECLIKNYEQRPFM  266 (275)
T ss_pred             HHHHHHHHhCCCCccccch------HHHHHH-hhccCCC-----CC--CchhhcCHHHHHHHHHHhhcChhhCcCH
Confidence                 99999999863211      011111 1111111     11  111223345678888999999 999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.12  E-value=7.1e-10  Score=88.73  Aligned_cols=98  Identities=16%  Similarity=0.275  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|..|..++..++           .+.+..|+||||+++|+|.+++.....  .+++.....++.++            
T Consensus        46 ~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~~i  123 (331)
T cd05624          46 ACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQLHY  123 (331)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45788888888776           577889999999999999999986433  46776665555554            


Q ss_pred             ------------CC-----------------CCccccccccCCcCccCcccccc-----CCCCcce----------eEec
Q 048710          106 ------------LA-----------------DQTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS----------NLLT  141 (208)
Q Consensus       106 ------------~~-----------------~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks----------E~~t  141 (208)
                                  ..                 +.........||++|+|||++.+     +.++.++          |++|
T Consensus       124 iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~  203 (331)
T cd05624         124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             eeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh
Confidence                        00                 00111123568999999999865     4566666          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       204 g~~Pf~~  210 (331)
T cd05624         204 GETPFYA  210 (331)
T ss_pred             CCCCccC
Confidence            9999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.12  E-value=7.4e-10  Score=86.33  Aligned_cols=98  Identities=15%  Similarity=0.135  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           ...+..++|+||+++++|..++....   .++|..+..++.++           
T Consensus        44 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~  120 (286)
T cd07847          44 KKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHN  120 (286)
T ss_pred             cHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356889999999987           56678999999999999998876543   48898888888877           


Q ss_pred             -------------CCCC----------------ccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -------------LADQ----------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                   ..+.                ........++..|+|||.+.+ ..++.++          |++||+.|
T Consensus       121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             ceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence                         0000                000112346789999999875 4566666          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       201 ~~~  203 (286)
T cd07847         201 WPG  203 (286)
T ss_pred             CCC
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.12  E-value=8.8e-10  Score=85.90  Aligned_cols=99  Identities=14%  Similarity=0.180  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++.+++           .+.+..++||||++ ++|.+++...... .+++..+.+++.++           
T Consensus        42 ~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          42 PSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLT-GLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             hhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356889999999988           66788999999995 7999999765432 58899998888877           


Q ss_pred             -------------CCC----------------CccccccccCCcCccCccccccC-CCCcce----------eEecCCCC
Q 048710          106 -------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p  145 (208)
                                   ..+                .........++..|+|||++.+. .++.++          |++||+.|
T Consensus       120 ~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  199 (283)
T cd07835         120 VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPL  199 (283)
T ss_pred             eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence                         000                00011223458899999988654 456666          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       200 f~~  202 (283)
T cd07835         200 FPG  202 (283)
T ss_pred             CCC
Confidence            863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.11  E-value=6.2e-10  Score=85.46  Aligned_cols=139  Identities=9%  Similarity=0.231  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           .. +..++|+||+++|+|.++++....  .+++..+..++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~  121 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK  121 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            468999999999988           33 678999999999999999987543  47888888888777           


Q ss_pred             -------------CCCC--------------c-cc----cccccCCcCccCccccccC--CCCcce----------eEec
Q 048710          106 -------------LADQ--------------T-YM----TTQVQGTFGYLDLQYFQSS--PFTEKS----------NLLT  141 (208)
Q Consensus       106 -------------~~~~--------------~-~~----~~~~~gt~~y~aPE~~~~~--~~~~ks----------E~~t  141 (208)
                                   ..+.              . ..    .....++..|+|||++.+.  .++.++          |+++
T Consensus       122 i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~  201 (259)
T cd05037         122 LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICS  201 (259)
T ss_pred             eecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHh
Confidence                         1011              0 00    0123467889999998776  666666          8888


Q ss_pred             -CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 -KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 -g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |..|+......      .+.. .......       +. .   .....+.+++.+||+.+ ++|||+
T Consensus       202 ~~~~p~~~~~~~------~~~~-~~~~~~~-------~~-~---~~~~~~~~li~~~l~~~p~~Rpt~  251 (259)
T cd05037         202 NGEEPLSTLSSS------EKER-FYQDQHR-------LP-M---PDCAELANLINQCWTYDPTKRPSF  251 (259)
T ss_pred             CCCCCcccCCch------hHHH-HHhcCCC-------CC-C---CCchHHHHHHHHHhccChhhCCCH
Confidence             56666532110      1111 1111110       00 0   01156678888999999 999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=9.1e-10  Score=88.10  Aligned_cols=99  Identities=16%  Similarity=0.258  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|..|..++..++           .+.+..|+||||+++|+|.+++.+...  .++......++.++           
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          45 TACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356888999988877           667889999999999999999976332  46776666666555           


Q ss_pred             -------------CC-----------------CCccccccccCCcCccCcccccc-----CCCCcce----------eEe
Q 048710          106 -------------LA-----------------DQTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------~~-----------------~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks----------E~~  140 (208)
                                   ..                 ..........||++|+|||++..     ..++.++          |++
T Consensus       123 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~  202 (331)
T cd05597         123 YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML  202 (331)
T ss_pred             eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh
Confidence                         00                 00011122458999999999863     3456666          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      +|+.||..
T Consensus       203 ~g~~Pf~~  210 (331)
T cd05597         203 YGETPFYA  210 (331)
T ss_pred             hCCCCCCC
Confidence            99999873

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.11  E-value=6.2e-10  Score=86.57  Aligned_cols=98  Identities=16%  Similarity=0.221  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++|+||+++ +|.+++.....  .+++..+..++.++           
T Consensus        42 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          42 PKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457889999999887           566889999999985 89988876443  58888888888877           


Q ss_pred             -------------CC-------C---------CccccccccCCcCccCccccccC-CCCcce----------eEecCCCC
Q 048710          106 -------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p  145 (208)
                                   ..       +         .........++..|++||.+.+. .++.++          |++||+.|
T Consensus       119 i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~  198 (283)
T cd05118         119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPL  198 (283)
T ss_pred             eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence                         00       0         00011224577889999998776 677777          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       199 ~~~  201 (283)
T cd05118         199 FPG  201 (283)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.10  E-value=3.5e-10  Score=94.63  Aligned_cols=144  Identities=18%  Similarity=0.287  Sum_probs=97.1

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ++.......+|+-+|.-+.           .++..+|||.||+++|-|.++|..++   +++.....+...+|       
T Consensus        52 s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yC  128 (786)
T KOG0588|consen   52 SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYC  128 (786)
T ss_pred             ccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHH
Confidence            3334556789999999888           88899999999999999999998766   46665555544444       


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce-----------eEecC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----------NLLTK  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----------E~~tg  142 (208)
                                                      .........+-+|++.|.+||+++|.+|.-..           -++||
T Consensus       129 H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG  208 (786)
T KOG0588|consen  129 HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTG  208 (786)
T ss_pred             hhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhC
Confidence                                            00111123466799999999999999998654           78999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +-||++    ++   ...+...+..|.+.      |    |.+...+...|....+..| .+|-||
T Consensus       209 ~LPFdD----dN---ir~LLlKV~~G~f~------M----Ps~Is~eaQdLLr~ml~VDp~~RiT~  257 (786)
T KOG0588|consen  209 KLPFDD----DN---IRVLLLKVQRGVFE------M----PSNISSEAQDLLRRMLDVDPSTRITT  257 (786)
T ss_pred             CCCCCC----cc---HHHHHHHHHcCccc------C----CCcCCHHHHHHHHHHhccCccccccH
Confidence            999983    22   22233344455331      1    1122223345555788888 888775

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.10  E-value=8.4e-10  Score=88.32  Aligned_cols=98  Identities=16%  Similarity=0.263  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|..|+.++..++           .+.+..|+||||+++|+|.+++++...  .+++.....++.++            
T Consensus        46 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i  123 (332)
T cd05623          46 ACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQLHY  123 (332)
T ss_pred             HHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45888888888776           667889999999999999999986433  46776666555555            


Q ss_pred             ------------C-----------------CCCccccccccCCcCccCccccc-----cCCCCcce----------eEec
Q 048710          106 ------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E~~t  141 (208)
                                  .                 .+.........||+.|+|||++.     ...++.++          |+++
T Consensus       124 iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~  203 (332)
T cd05623         124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY  203 (332)
T ss_pred             EecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence                        0                 00111112356899999999986     24566666          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       204 g~~Pf~~  210 (332)
T cd05623         204 GETPFYA  210 (332)
T ss_pred             CCCCCCC
Confidence            9999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.10  E-value=1.3e-09  Score=88.83  Aligned_cols=56  Identities=14%  Similarity=0.264  Sum_probs=43.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ....|.+|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi  110 (381)
T cd05626          44 QVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME---VFPEVLARFYIAEL  110 (381)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            3457899999999988           67788999999999999999997654   35665554444444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=1.4e-09  Score=83.76  Aligned_cols=129  Identities=16%  Similarity=0.151  Sum_probs=83.0

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CCCC---------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LADQ---------  109 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~~~---------  109 (208)
                      .+.+..|+|+||+++|+|.+++....   .+++.....++.++                        ..+.         
T Consensus        67 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  143 (260)
T cd05611          67 QSKDYLYLVMEYLNGGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGL  143 (260)
T ss_pred             EcCCeEEEEEeccCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeeccc
Confidence            56778999999999999999997643   46777777777776                        0000         


Q ss_pred             ---ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccc
Q 048710          110 ---TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDG  176 (208)
Q Consensus       110 ---~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  176 (208)
                         ........|+..|++||...+..++.++          |++||..|+.....      .. +......+...  ..+
T Consensus       144 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~-~~~~~~~~~~~--~~~  214 (260)
T cd05611         144 SRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP------DA-VFDNILSRRIN--WPE  214 (260)
T ss_pred             ceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHhcccC--CCC
Confidence               0001234578899999999887777777          99999999873321      11 11111111110  011


Q ss_pred             cccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          177 LVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       177 ~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .+    .......+.+++..||+.+ ++||+.
T Consensus       215 ~~----~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         215 EV----KEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             cc----cccCCHHHHHHHHHHccCCHHHccCC
Confidence            11    1122345678888999999 999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.09  E-value=2.9e-10  Score=92.40  Aligned_cols=97  Identities=14%  Similarity=0.236  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|..|+.++..++           .+.+..|+||||+++|+|.+++.+.    .++......++.++           
T Consensus        87 ~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~  162 (370)
T cd05621          87 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345889999999887           6778899999999999999999754    35566555555555           


Q ss_pred             -------------C-----------------CCCccccccccCCcCccCccccccCC----CCcce----------eEec
Q 048710          106 -------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQSSP----FTEKS----------NLLT  141 (208)
Q Consensus       106 -------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ks----------E~~t  141 (208)
                                   .                 ...........||+.|+|||.+.+..    ++.++          |++|
T Consensus       163 IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~  242 (370)
T cd05621         163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV  242 (370)
T ss_pred             eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence                         0                 00011123456999999999987543    55566          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       243 G~~Pf~~  249 (370)
T cd05621         243 GDTPFYA  249 (370)
T ss_pred             CCCCCCC
Confidence            9999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.09  E-value=1.2e-09  Score=85.58  Aligned_cols=143  Identities=15%  Similarity=0.184  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.+|+.++.+++            ...+..++|+||+++|+|.+++....   .+++.....++.++          
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~  124 (290)
T cd05613          48 TEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL  124 (290)
T ss_pred             HHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            356788999999885            45667899999999999999997643   46666665555444          


Q ss_pred             --------------CC-------C----------CccccccccCCcCccCccccccC--CCCcce----------eEecC
Q 048710          106 --------------LA-------D----------QTYMTTQVQGTFGYLDLQYFQSS--PFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~~-------~----------~~~~~~~~~gt~~y~aPE~~~~~--~~~~ks----------E~~tg  142 (208)
                                    ..       +          .........|+..|+|||...+.  .++.++          |++||
T Consensus       125 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g  204 (290)
T cd05613         125 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG  204 (290)
T ss_pred             CeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC
Confidence                          00       0          00111234578999999998653  345555          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      ..|+.....  ...............       +    ..+......+.++..+||+.+ ++||+
T Consensus       205 ~~p~~~~~~--~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~ll~~~l~~~p~~R~~  256 (290)
T cd05613         205 ASPFTVDGE--KNSQAEISRRILKSE-------P----PYPQEMSALAKDIIQRLLMKDPKKRLG  256 (290)
T ss_pred             CCCCCcCCc--cccHHHHHHHhhccC-------C----CCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence            999863211  111222222221111       1    111112234557777999999 99984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=9.7e-10  Score=88.95  Aligned_cols=55  Identities=16%  Similarity=0.330  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+|+.++..++           .+.+..|+||||+++|+|.+++....   .+++.....++.++
T Consensus        45 ~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi  110 (364)
T cd05599          45 VAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD---TFTEEETRFYIAET  110 (364)
T ss_pred             HHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHH
Confidence            356889999999988           67888999999999999999998643   47777776666655

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.08  E-value=8.9e-10  Score=90.21  Aligned_cols=96  Identities=16%  Similarity=0.174  Sum_probs=73.1

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      .+.+|++++.+++           ...+..++||||+. ++|.+++....   .++|..+..++.++             
T Consensus       132 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~giv  207 (392)
T PHA03207        132 TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGRGII  207 (392)
T ss_pred             cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            4678999999988           45678999999986 78999995432   58899888888877             


Q ss_pred             --------------------CCC---------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 --------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                          .-+         .........||+.|+|||++.+..++.++          |+++|+.|+
T Consensus       208 HrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf  287 (392)
T PHA03207        208 HRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL  287 (392)
T ss_pred             ccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                                000         00111235689999999999988888888          999999999


Q ss_pred             CCC
Q 048710          147 CLT  149 (208)
Q Consensus       147 ~~~  149 (208)
                      ...
T Consensus       288 ~~~  290 (392)
T PHA03207        288 FGK  290 (392)
T ss_pred             CCC
Confidence            754

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.08  E-value=4.3e-10  Score=89.22  Aligned_cols=143  Identities=15%  Similarity=0.210  Sum_probs=91.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|++++.+++           .+.+..++|+||+. |+|.+++.....  .++|.+...++.++          
T Consensus        64 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~  140 (313)
T cd06633          64 KWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH  140 (313)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999988           56678999999996 688888865433  58888888777666          


Q ss_pred             --------------CCC------------CccccccccCCcCccCccccc---cCCCCcce----------eEecCCCCC
Q 048710          106 --------------LAD------------QTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~~------------~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..+            .........|+..|+|||++.   ...++.++          |+++|..|+
T Consensus       141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~  220 (313)
T cd06633         141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  220 (313)
T ss_pred             CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                          000            001112346788999999984   34566666          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ....+.... ....+....+        .....+..++.+||+.+ .+||++
T Consensus       221 ~~~~------~~~~~~~~~-~~~~~~~~~~--------~~~~~l~~li~~~l~~~P~~Rp~~  267 (313)
T cd06633         221 FNMN------AMSALYHIA-QNDSPTLQSN--------EWTDSFRGFVDYCLQKIPQERPAS  267 (313)
T ss_pred             CCCC------hHHHHHHHH-hcCCCCCCcc--------ccCHHHHHHHHHHccCChhhCcCH
Confidence            7431      111111111 1111111111        11224567777999999 999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.08  E-value=5.8e-10  Score=92.01  Aligned_cols=100  Identities=21%  Similarity=0.345  Sum_probs=82.4

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +...+...+|++++++++           .+..++++|.||+.+ +|...|...+   .++..+.-.|+.++        
T Consensus        42 ~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLh  117 (808)
T KOG0597|consen   42 EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLH  117 (808)
T ss_pred             hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH
Confidence            344567999999999999           778889999999987 9999998765   47788777777776        


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                                      ...++...+.+.||+-|||||...+++|+..+          |+++|+
T Consensus       118 s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~  197 (808)
T KOG0597|consen  118 SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQ  197 (808)
T ss_pred             hcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCC
Confidence                                            11233334678899999999999999999988          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||-.
T Consensus       198 PPF~a  202 (808)
T KOG0597|consen  198 PPFYA  202 (808)
T ss_pred             CCchH
Confidence            99873

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=1.6e-09  Score=88.25  Aligned_cols=55  Identities=13%  Similarity=0.310  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+|++++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++
T Consensus        45 ~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql  110 (377)
T cd05629          45 LAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYD---TFSEDVTRFYMAEC  110 (377)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            457889999999988           67788999999999999999997643   46665555555544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.08  E-value=5.1e-10  Score=88.61  Aligned_cols=143  Identities=15%  Similarity=0.202  Sum_probs=90.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+|.+|++++..++           ...+..++|+||+. |+|.+++.....  .+++.+...++.++          
T Consensus        58 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~  134 (308)
T cd06634          58 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH  134 (308)
T ss_pred             HHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467889999999987           56778999999997 688888765433  47788777776666          


Q ss_pred             --------------CC-------CC-----ccccccccCCcCccCccccc---cCCCCcce----------eEecCCCCC
Q 048710          106 --------------LA-------DQ-----TYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~-------~~-----~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..       +.     ........|+..|+|||.+.   .+.++.++          |++||..|+
T Consensus       135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  214 (308)
T cd06634         135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  214 (308)
T ss_pred             CcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCC
Confidence                          00       00     00112345789999999974   34566666          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....      ..... ....+..+...        +......+.+++.+||+.+ ++||++
T Consensus       215 ~~~~~------~~~~~-~~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~P~~Rp~~  261 (308)
T cd06634         215 FNMNA------MSALY-HIAQNESPALQ--------SGHWSEYFRNFVDSCLQKIPQDRPTS  261 (308)
T ss_pred             ccccH------HHHHH-HHhhcCCCCcC--------cccccHHHHHHHHHHhhCCcccCCCH
Confidence            63211      11111 11112111111        1122234567777999999 999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.08  E-value=7.2e-10  Score=86.34  Aligned_cols=96  Identities=21%  Similarity=0.287  Sum_probs=67.9

Q ss_pred             HHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           51 LINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        51 f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      +.+|+..+.+++            ...+..++||||+ +|+|.+++...... .++|.+...++.++             
T Consensus        44 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i~  121 (283)
T cd07830          44 NLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGK-PFSESVIRSIIYQILQGLAHIHKHGFF  121 (283)
T ss_pred             HHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            455667776655            5678899999999 89999999875432 58899988888887             


Q ss_pred             -----------C-------CC--------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCCC
Q 048710          106 -----------L-------AD--------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 -----------~-------~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~  148 (208)
                                 .       .+        .........|+..|+|||.+.+ ..++.++          |++||+.|+..
T Consensus       122 H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~  201 (283)
T cd07830         122 HRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPG  201 (283)
T ss_pred             cCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCC
Confidence                       0       00        0001123457889999998754 4456666          99999988863

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.07  E-value=4.6e-10  Score=87.45  Aligned_cols=98  Identities=10%  Similarity=0.095  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCC--CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           48 VNKLINEVVILSQIN-----------LET--EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~--~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...|.+|++++.+++           ...  +..++|+||++ ++|.+++.+...  .+++.....++.++         
T Consensus        42 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~  118 (287)
T cd07840          42 PITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHS  118 (287)
T ss_pred             hHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            457889999999887           333  78999999998 489999876532  58888888888776         


Q ss_pred             ---------------CCC-----------------CccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 ---------------LAD-----------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------~~~-----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                     ..+                 .........++..|+|||.+.+ ..++.++          |++||
T Consensus       119 ~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~  198 (287)
T cd07840         119 NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG  198 (287)
T ss_pred             CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhC
Confidence                           000                 0001123446788999998764 4566776          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       199 ~~p~~~  204 (287)
T cd07840         199 KPIFQG  204 (287)
T ss_pred             CCCCCC
Confidence            999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.07  E-value=1.6e-09  Score=88.21  Aligned_cols=55  Identities=13%  Similarity=0.254  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+|+.+|.+++           .+.+..|+||||+++|+|.+++....   .++......++.++
T Consensus        45 ~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi  110 (376)
T cd05598          45 AAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG---IFEEDLARFYIAEL  110 (376)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            356889999999987           67789999999999999999997643   35555444444333

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.07  E-value=4.5e-10  Score=87.52  Aligned_cols=101  Identities=12%  Similarity=0.158  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++|+||++ |+|.+++........+++.....++.++           
T Consensus        42 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          42 PSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             hHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456788999999988           56678899999999 5899998765433368999888888877           


Q ss_pred             -------------CCCC----------------ccccccccCCcCccCccccccC-CCCcce----------eEecCCCC
Q 048710          106 -------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p  145 (208)
                                   ..+.                ........+|..|++||.+.+. .++.++          |++||+.|
T Consensus       121 i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  200 (284)
T cd07836         121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPL  200 (284)
T ss_pred             eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                         0000                0011234568899999988653 456666          99999999


Q ss_pred             CCCC
Q 048710          146 ICLT  149 (208)
Q Consensus       146 ~~~~  149 (208)
                      +...
T Consensus       201 ~~~~  204 (284)
T cd07836         201 FPGT  204 (284)
T ss_pred             CCCC
Confidence            8743

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.07  E-value=1.2e-09  Score=88.89  Aligned_cols=97  Identities=14%  Similarity=0.241  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|..++..++           .+.+..++||||+++|+|.+++.+.    .++......++.++           
T Consensus        87 ~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~  162 (371)
T cd05622          87 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG  162 (371)
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345788999999887           6778899999999999999999754    24444444444443           


Q ss_pred             -------------C-----------------CCCccccccccCCcCccCccccccCC----CCcce----------eEec
Q 048710          106 -------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQSSP----FTEKS----------NLLT  141 (208)
Q Consensus       106 -------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ks----------E~~t  141 (208)
                                   .                 ...........||+.|+|||++.+..    ++.++          |+++
T Consensus       163 ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~  242 (371)
T cd05622         163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (371)
T ss_pred             EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence                         0                 00011123456999999999987533    56666          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |..||..
T Consensus       243 G~~Pf~~  249 (371)
T cd05622         243 GDTPFYA  249 (371)
T ss_pred             CCCCCCC
Confidence            9999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.06  E-value=3.8e-10  Score=85.31  Aligned_cols=144  Identities=15%  Similarity=0.191  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++.+.+++           ...+..++++||+++++|.+++....   .+++.....++.++           
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~  107 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG---RLSEDEARFYARQILSALEYLHSNG  107 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            568999999999888           55578999999999999999997643   26777777777766           


Q ss_pred             -------------CCC---------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 -------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 -------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                   ..+               .........|+..|++||...+..++.++          |+++|..|+.
T Consensus       108 i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~  187 (244)
T smart00220      108 IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFP  187 (244)
T ss_pred             eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                         000               00012345578899999999888888877          9999999987


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...  ..    ..+......+..... ..      .......+.+++.+||+.+ ++||++
T Consensus       188 ~~~--~~----~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~i~~~l~~~p~~Rp~~  235 (244)
T smart00220      188 GDD--QL----LELFKKIGKPKPPFP-PP------EWKISPEAKDLIRKLLVKDPEKRLTA  235 (244)
T ss_pred             CCC--cH----HHHHHHHhccCCCCc-cc------cccCCHHHHHHHHHHccCCchhccCH
Confidence            421  11    112222222211100 00      0003346778888999999 999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.05  E-value=2e-09  Score=83.52  Aligned_cols=140  Identities=19%  Similarity=0.222  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++.+++            ...+..++||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        45 ~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~  121 (280)
T cd05581          45 VKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK  121 (280)
T ss_pred             HHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456888888988885            67788999999999999999998653   58888888888877          


Q ss_pred             --------------CC-------C--------C-c--------------------cccccccCCcCccCccccccCCCCc
Q 048710          106 --------------LA-------D--------Q-T--------------------YMTTQVQGTFGYLDLQYFQSSPFTE  135 (208)
Q Consensus       106 --------------~~-------~--------~-~--------------------~~~~~~~gt~~y~aPE~~~~~~~~~  135 (208)
                                    ..       +        . .                    .......|+..|++||...+..++.
T Consensus       122 ~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~  201 (280)
T cd05581         122 GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGK  201 (280)
T ss_pred             CeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCCh
Confidence                          00       0        0 0                    1112335688999999988877777


Q ss_pred             ce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCC
Q 048710          136 KS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKK  204 (208)
Q Consensus       136 ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~R  204 (208)
                      ++          |+++|..|+....  .   .  ..........          ...+......+.+++.+||+.+ ++|
T Consensus       202 ~~Di~slG~~l~~l~~g~~p~~~~~--~---~--~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~R  264 (280)
T cd05581         202 SSDLWALGCIIYQMLTGKPPFRGSN--E---Y--LTFQKILKLE----------YSFPPNFPPDAKDLIEKLLVLDPQDR  264 (280)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcc--H---H--HHHHHHHhcC----------CCCCCccCHHHHHHHHHHhcCCHhhC
Confidence            77          9999999987432  0   0  0111111110          0111122345677888999999 999


Q ss_pred             CCC
Q 048710          205 PTM  207 (208)
Q Consensus       205 Psm  207 (208)
                      |+.
T Consensus       265 ~~~  267 (280)
T cd05581         265 LGV  267 (280)
T ss_pred             CCc
Confidence            996

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.05  E-value=1.2e-09  Score=85.83  Aligned_cols=96  Identities=14%  Similarity=0.114  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+..|++++.+++           .+.+..++||||+ +|+|.+++.+...  .+++.....++.++            
T Consensus        47 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~i  123 (298)
T cd07841          47 FTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHSNWI  123 (298)
T ss_pred             HHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45778999999887           5667899999999 9999999987542  58899988888877            


Q ss_pred             ------------CCCC----------------ccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ------------LADQ----------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                  ..+.                ........++..|+|||.+.+ ..++.++          |++||..|+
T Consensus       124 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~  203 (298)
T cd07841         124 LHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL  203 (298)
T ss_pred             eecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence                        0000                001112345678999998864 4456666          999997666


Q ss_pred             C
Q 048710          147 C  147 (208)
Q Consensus       147 ~  147 (208)
                      .
T Consensus       204 ~  204 (298)
T cd07841         204 P  204 (298)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.05  E-value=9.1e-10  Score=89.79  Aligned_cols=55  Identities=15%  Similarity=0.280  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .++......++.++
T Consensus        45 ~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi  110 (382)
T cd05625          45 VAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG---IFPEDLARFYIAEL  110 (382)
T ss_pred             HHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            457889999999887           67788999999999999999997653   35555444444433

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.05  E-value=2.2e-10  Score=87.99  Aligned_cols=145  Identities=21%  Similarity=0.345  Sum_probs=96.3

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      ....|+.++.+++           ...+..++|+||+++|+|.++|....   .+++..+..++.++             
T Consensus        44 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~~i~  120 (260)
T PF00069_consen   44 ENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSKGIV  120 (260)
T ss_dssp             HHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhhhhccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence            3455889999887           56888999999999999999998322   58889888888888             


Q ss_pred             --------------------C-------CCCccccccccCCcCccCccccc-cCCCCcce----------eEecCCCCCC
Q 048710          106 --------------------L-------ADQTYMTTQVQGTFGYLDLQYFQ-SSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 --------------------~-------~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ks----------E~~tg~~p~~  147 (208)
                                          +       ...........+|..|+|||... +...+.++          |+++|..|+.
T Consensus       121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~  200 (260)
T PF00069_consen  121 HRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFE  200 (260)
T ss_dssp             ESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSST
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                1       11122234566899999999998 77777777          9999999988


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ......   ....+..... ...    ....  .........+.++...||+.+ ++||++
T Consensus       201 ~~~~~~---~~~~~~~~~~-~~~----~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~  251 (260)
T PF00069_consen  201 ESNSDD---QLEIIEKILK-RPL----PSSS--QQSREKSEELRDLIKKMLSKDPEQRPSA  251 (260)
T ss_dssp             TSSHHH---HHHHHHHHHH-THH----HHHT--TSHTTSHHHHHHHHHHHSSSSGGGSTTH
T ss_pred             cccchh---hhhhhhhccc-ccc----cccc--cccchhHHHHHHHHHHHccCChhHCcCH
Confidence            431101   1111111111 100    0000  000011256778888999999 999996

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.05  E-value=9.9e-10  Score=87.33  Aligned_cols=45  Identities=22%  Similarity=0.255  Sum_probs=38.0

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE   89 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~   89 (208)
                      .+...+...|-+||+.++           ...+..|||||||+||+|...++.+.+
T Consensus       118 rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~  173 (459)
T KOG0610|consen  118 RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPG  173 (459)
T ss_pred             hhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCC
Confidence            444567788899999998           778889999999999999999987643

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.04  E-value=6.5e-10  Score=86.70  Aligned_cols=96  Identities=15%  Similarity=0.234  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++.+++           .+.+..++|+||++ |+|.+++.+...  .+++.....++.++            
T Consensus        44 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~i  120 (284)
T cd07839          44 SSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSHNV  120 (284)
T ss_pred             cchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            46788999999888           66778999999997 688888875433  48888888877777            


Q ss_pred             ------------CCCC----------------ccccccccCCcCccCccccccC-CCCcce----------eEecCCCCC
Q 048710          106 ------------LADQ----------------TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~~~~----------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~  146 (208)
                                  ..+.                ........++..|+|||.+.+. .++.++          |++||..|+
T Consensus       121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~  200 (284)
T cd07839         121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  200 (284)
T ss_pred             ecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence                        0000                0011234568899999998764 356666          999999886


Q ss_pred             C
Q 048710          147 C  147 (208)
Q Consensus       147 ~  147 (208)
                      .
T Consensus       201 ~  201 (284)
T cd07839         201 F  201 (284)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.03  E-value=1.7e-09  Score=87.50  Aligned_cols=94  Identities=16%  Similarity=0.263  Sum_probs=70.4

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      .+..|+.++.+++           ...+..++|+||+. |+|.+++.+...  .++|..+..|+.++             
T Consensus       103 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~iv  179 (357)
T PHA03209        103 TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQRII  179 (357)
T ss_pred             ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4567999999988           56678899999995 799999876443  58999998888887             


Q ss_pred             --------------------CCC------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 --------------------LAD------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------------~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                          .-+      .........||..|+|||++.+..++.++          |++++..|+
T Consensus       180 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        180 HRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             cCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence                                000      01112245689999999999988888888          888865554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.03  E-value=2e-10  Score=87.04  Aligned_cols=150  Identities=17%  Similarity=0.204  Sum_probs=97.0

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      .+....++|..|.-.|+-+.           ..++++.+|..||+-|||+..||+..+. ..+-.+.++.++++      
T Consensus       226 ~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~v-vvd~sqav~faldiargmaf  304 (448)
T KOG0195|consen  226 VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSV-VVDHSQAVRFALDIARGMAF  304 (448)
T ss_pred             cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccE-EEecchHHHHHHHHHhhHHH
Confidence            33444567877766555444           6778899999999999999999987654 56666777766666      


Q ss_pred             --------------------CCC--------CccccccccC---CcCccCccccccCCCCc--ce-----------eEec
Q 048710          106 --------------------LAD--------QTYMTTQVQG---TFGYLDLQYFQSSPFTE--KS-----------NLLT  141 (208)
Q Consensus       106 --------------------~~~--------~~~~~~~~~g---t~~y~aPE~~~~~~~~~--ks-----------E~~t  141 (208)
                                          +.+        ....+.+..|   .+.||+||.++..+.+.  .+           |+.|
T Consensus       305 lhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~t  384 (448)
T KOG0195|consen  305 LHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNT  384 (448)
T ss_pred             HhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhc
Confidence                                111        1111222333   68999999998765443  22           9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      .+.||..-++-+   .          |  ..+.=..++...|+-...-+.+|+.-|++.| .+||.++
T Consensus       385 revpfadlspme---c----------g--mkialeglrv~ippgis~hm~klm~icmnedpgkrpkfd  437 (448)
T KOG0195|consen  385 REVPFADLSPME---C----------G--MKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD  437 (448)
T ss_pred             cccccccCCchh---h----------h--hhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence            999998543211   0          0  0111112233344444456778999999999 9999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.02  E-value=5e-10  Score=81.30  Aligned_cols=119  Identities=12%  Similarity=0.088  Sum_probs=73.9

Q ss_pred             CChhhHhhcCCCCCCCCHHHHHHHHHhC--------C----------CC------Ccc---ccccccCCcCccCcccccc
Q 048710           78 GTVYQYINNQNEEFPIAWEMQLHIVVDS--------L----------AD------QTY---MTTQVQGTFGYLDLQYFQS  130 (208)
Q Consensus        78 GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------~----------~~------~~~---~~~~~~gt~~y~aPE~~~~  130 (208)
                      |||.+++++.+.  .++|.+...|+.++        .          .+      ...   ......||+.|||||++.+
T Consensus         1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE~~~~   78 (176)
T smart00750        1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPEVIQG   78 (176)
T ss_pred             CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceeeccceEeeccccCCCcccccChHHhcC
Confidence            899999986433  58999999988888        0          00      000   0123368999999999999


Q ss_pred             CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHH--HHHHHHHHhh
Q 048710          131 SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIV--VVVKLKKRCL  198 (208)
Q Consensus       131 ~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~--~~~~l~~~C~  198 (208)
                      ..++.++          |++||+.||....     .+...+....... . . .++.-. ..+.....  .+.+++.+||
T Consensus        79 ~~~~~~~DiwSlG~il~elltg~~p~~~~~-----~~~~~~~~~~~~~-~-~-~~~~~~-~~~~~~~~~~~~~~~i~~cl  149 (176)
T smart00750       79 QSYTEKADIYSLGITLYEALDYELPYNEER-----ELSAILEILLNGM-P-A-DDPRDR-SNLESVSAARSFADFMRVCA  149 (176)
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCccccc-----hhcHHHHHHHHHh-c-c-CCcccc-ccHHHHHhhhhHHHHHHHHH
Confidence            9999888          9999999986321     1111111111110 0 0 000000 01112222  5788889999


Q ss_pred             cCC-CCCCCC
Q 048710          199 NLN-EKKPTM  207 (208)
Q Consensus       199 ~~~-~~RPsm  207 (208)
                      +.+ .+||++
T Consensus       150 ~~~p~~Rp~~  159 (176)
T smart00750      150 SRLPQRREAA  159 (176)
T ss_pred             hcccccccCH
Confidence            999 999986

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.02  E-value=6.7e-10  Score=87.06  Aligned_cols=98  Identities=15%  Similarity=0.168  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..++||||++ |+|.+++.....  .+++.....++.++           
T Consensus        47 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~  123 (288)
T cd07871          47 PCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKRK  123 (288)
T ss_pred             chhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346789999999988           56678999999998 599999976543  46777776666665           


Q ss_pred             -------------CC---------C-------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -------------LA---------D-------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~---------~-------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                   ..         +       .........||+.|+|||.+.+ ..++.++          |++||+.|
T Consensus       124 ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~p  203 (288)
T cd07871         124 ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPM  203 (288)
T ss_pred             cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence                         00         0       0011123457899999998865 4566666          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       204 f~~  206 (288)
T cd07871         204 FPG  206 (288)
T ss_pred             CCC
Confidence            874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.02  E-value=3.5e-09  Score=85.92  Aligned_cols=144  Identities=17%  Similarity=0.248  Sum_probs=97.7

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ......+|+.+|.++.            .+.+..++|||++.||.|.+.|...    .++......++.++         
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~  153 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS  153 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh
Confidence            3468999999999995            7788999999999999999999865    26666666666666         


Q ss_pred             ----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                                        ...........+||+.|+|||++....++...          .+++
T Consensus       154 ~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~  233 (382)
T KOG0032|consen  154 LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS  233 (382)
T ss_pred             CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh
Confidence                                              00112234678899999999999988888888          7889


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||.....     ...  ...+..+++ + ++..-.... .+.+.   ++...++..| .+|+|.
T Consensus       234 G~~PF~~~~~-----~~~--~~~i~~~~~-~-f~~~~w~~i-s~~ak---d~i~~ll~~dp~~R~ta  287 (382)
T KOG0032|consen  234 GVPPFWGETE-----FEI--FLAILRGDF-D-FTSEPWDDI-SESAK---DFIRKLLEFDPRKRLTA  287 (382)
T ss_pred             CCCCCcCCCh-----hHH--HHHHHcCCC-C-CCCCCcccc-CHHHH---HHHHHhcccCcccCCCH
Confidence            9999985321     111  112333332 1 111101111 24444   4445999999 999873

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=3e-10  Score=84.34  Aligned_cols=142  Identities=13%  Similarity=0.151  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC---CCCCCHHHHHHHHHhC--------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE---EFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~---~~~l~~~~r~~i~~~i--------  105 (208)
                      .+++.+|+++-+.|+           .+....||++||.++|+|+..|++...   ....+|..-.++|...        
T Consensus        66 ~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V  145 (281)
T KOG0580|consen   66 EHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV  145 (281)
T ss_pred             hhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc
Confidence            467899999999998           788899999999999999999994321   2245666555555544        


Q ss_pred             --------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 --------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 --------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                                .........+.+||+-|.+||...+...+...          |.+.|..||...
T Consensus       146 IhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~  225 (281)
T KOG0580|consen  146 IHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ  225 (281)
T ss_pred             ccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence                                      11224556788999999999999998888887          999999999843


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .       .....+.+..-   +..+|       ........+++..|+..+ .+|.+
T Consensus       226 ~-------~~etYkrI~k~---~~~~p-------~~is~~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  226 S-------HSETYKRIRKV---DLKFP-------STISGGAADLISRLLVKNPIERLA  266 (281)
T ss_pred             h-------hHHHHHHHHHc---cccCC-------cccChhHHHHHHHHhccCcccccc
Confidence            2       11112222221   11112       222234456777999999 88865

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.01  E-value=3.4e-09  Score=82.60  Aligned_cols=98  Identities=16%  Similarity=0.199  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHhhcc--------------cCCCe-----EEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN--------------LETEV-----LLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~--------------~~~~~-----~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++              ...+.     .+++|||++ ++|.+++...... .++|.....++.++    
T Consensus        43 ~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al  120 (287)
T cd07838          43 LSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKP-GLPPETIKDLMRQLLRGV  120 (287)
T ss_pred             hhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCC-CCCHHHHHHHHHHHHHHH
Confidence            45777888777663              23333     899999998 5899998764332 58899888888877    


Q ss_pred             --------------------CCC---------------CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          ..+               .........++..|+|||.+.+..++.++          |++
T Consensus       121 ~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~  200 (287)
T cd07838         121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF  200 (287)
T ss_pred             HHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHH
Confidence                                000               00011233468889999999888888887          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||..|+..
T Consensus       201 ~~~~~~~~  208 (287)
T cd07838         201 RRRPLFRG  208 (287)
T ss_pred             hCCCcccC
Confidence            99888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.01  E-value=3e-09  Score=82.94  Aligned_cols=126  Identities=10%  Similarity=0.118  Sum_probs=81.0

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CCCC---------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LADQ---------  109 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~~~---------  109 (208)
                      .+.+..++|+||+++|+|.+++....   .++|..+..++.++                        ..+.         
T Consensus        67 ~~~~~~~~v~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~  143 (278)
T cd05606          67 HTPDKLSFILDLMNGGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL  143 (278)
T ss_pred             ecCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcC
Confidence            56778999999999999999997543   58999998888877                        0000         


Q ss_pred             -----ccccccccCCcCccCccccccC-CCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccc
Q 048710          110 -----TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI  173 (208)
Q Consensus       110 -----~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  173 (208)
                           ........|+..|+|||.+.++ .++.++          |++||+.||........    ..+......      
T Consensus       144 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~------  213 (278)
T cd05606         144 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLT------  213 (278)
T ss_pred             ccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----HHHHHHhhc------
Confidence                 0011234589999999998754 567666          99999999974321111    111111110      


Q ss_pred             ccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          174 FDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       174 ~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      .++.+....    ...+.++..+|++.+ ++||
T Consensus       214 ~~~~~~~~~----s~~~~~li~~~l~~~p~~R~  242 (278)
T cd05606         214 MAVELPDSF----SPELRSLLEGLLQRDVNRRL  242 (278)
T ss_pred             cCCCCCCcC----CHHHHHHHHHHhhcCHHhcc
Confidence            111222122    234566777999999 9999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.01  E-value=2.3e-09  Score=84.57  Aligned_cols=97  Identities=13%  Similarity=0.135  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++.+++           .+.+..++||||++ |+|.+++.....  .++......++.++            
T Consensus        48 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~i  124 (303)
T cd07869          48 FTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQRYI  124 (303)
T ss_pred             hhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            46788999999987           66778999999996 788888876433  46777666666666            


Q ss_pred             ---------------------CCC-------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ---------------------LAD-------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                           +-+       .........||+.|+|||.+.+ ..++.++          |++||..||
T Consensus       125 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf  204 (303)
T cd07869         125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF  204 (303)
T ss_pred             ecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                                 000       0011123457899999999865 4466666          999999999


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       205 ~~  206 (303)
T cd07869         205 PG  206 (303)
T ss_pred             CC
Confidence            74

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.01  E-value=4.9e-10  Score=88.28  Aligned_cols=97  Identities=16%  Similarity=0.182  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++.+++           ...+..++|+||++ |+|.+++.....  .+++.....++.++            
T Consensus        49 ~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (301)
T cd07873          49 CTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRRKV  125 (301)
T ss_pred             hHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            46788999999988           66788999999998 699999976543  47777776666666            


Q ss_pred             ------------CCC----------------CccccccccCCcCccCccccccC-CCCcce----------eEecCCCCC
Q 048710          106 ------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~  146 (208)
                                  ..+                .........++..|+|||.+.+. .++.++          |++||+.||
T Consensus       126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f  205 (301)
T cd07873         126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLF  205 (301)
T ss_pred             eCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCC
Confidence                        000                00011233468899999988653 456666          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       206 ~~  207 (301)
T cd07873         206 PG  207 (301)
T ss_pred             CC
Confidence            74

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.00  E-value=6.8e-10  Score=88.42  Aligned_cols=102  Identities=18%  Similarity=0.299  Sum_probs=77.4

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      +++..-...+|+++|+.|+           .+.+...|||||.++|.|++|+.+..   .|+....-.+..+|       
T Consensus        93 deqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYC  169 (668)
T KOG0611|consen   93 DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYC  169 (668)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHH
Confidence            4455667899999999999           78899999999999999999998755   46666666666666       


Q ss_pred             ----------------------------CC-C---CccccccccCCcCccCccccccCCCCcce-----------eEecC
Q 048710          106 ----------------------------LA-D---QTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----------NLLTK  142 (208)
Q Consensus       106 ----------------------------~~-~---~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----------E~~tg  142 (208)
                                                  .. +   ......+.+|++.|.+||...|.+|.-..           .++-|
T Consensus       170 HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyG  249 (668)
T KOG0611|consen  170 HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYG  249 (668)
T ss_pred             hhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhc
Confidence                                        00 0   11113467899999999999998887544           55568


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      ..||+.
T Consensus       250 tMPFDG  255 (668)
T KOG0611|consen  250 TMPFDG  255 (668)
T ss_pred             ccccCC
Confidence            888873

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.99  E-value=4.7e-09  Score=88.77  Aligned_cols=146  Identities=13%  Similarity=0.173  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHH----HHHHHHhC-------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEM----QLHIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~----r~~i~~~i-------  105 (208)
                      .+-+..|+.+=+.++           .+++.+-|.||-+|||||.+.|+.+=++-+-+...    --+|+.|+       
T Consensus       616 ~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~  695 (1226)
T KOG4279|consen  616 VQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK  695 (1226)
T ss_pred             hccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc
Confidence            445677887777777           67788889999999999999998753321112221    12455555       


Q ss_pred             ------------------------------CCCCccccccccCCcCccCcccccc--CCCCcce----------eEecCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQS--SPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ks----------E~~tg~  143 (208)
                                                    ..+....+.+..||..|||||++-.  +.|+..+          ||.||+
T Consensus       696 IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGr  775 (1226)
T KOG4279|consen  696 IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGR  775 (1226)
T ss_pred             eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCC
Confidence                                          1112233456679999999999964  3455444          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....     ..+-+.+.-.-.     +.    ...|.+.....-..+++|..+| .+||+-
T Consensus       776 PPF~Elgs-----pqAAMFkVGmyK-----vH----P~iPeelsaeak~FilrcFepd~~~R~sA  826 (1226)
T KOG4279|consen  776 PPFVELGS-----PQAAMFKVGMYK-----VH----PPIPEELSAEAKNFILRCFEPDPCDRPSA  826 (1226)
T ss_pred             CCeeecCC-----hhHhhhhhccee-----cC----CCCcHHHHHHHHHHHHHHcCCCcccCccH
Confidence            99974321     111111111100     11    2334455555667778999999 999984

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.99  E-value=4.4e-09  Score=87.75  Aligned_cols=95  Identities=13%  Similarity=0.196  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+++|.+++           ...+..++|+||+. |+|.+++.....  .++|.++..|+.++            
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gI  281 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGEGI  281 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            45789999999998           56678999999995 899999876433  58999999988888            


Q ss_pred             ---------------------CCCC---------ccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ---------------------LADQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ---------------------~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                           .-+.         ........||..|+|||++.+..++.++          |+++|..|
T Consensus       282 vHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~  361 (461)
T PHA03211        282 IHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS  361 (461)
T ss_pred             EECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence                                 0000         0011235689999999999998888888          88887765


Q ss_pred             C
Q 048710          146 I  146 (208)
Q Consensus       146 ~  146 (208)
                      +
T Consensus       362 l  362 (461)
T PHA03211        362 L  362 (461)
T ss_pred             c
Confidence            4

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.98  E-value=1e-09  Score=83.53  Aligned_cols=121  Identities=13%  Similarity=0.003  Sum_probs=78.3

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CCCC---------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LADQ---------  109 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~~~---------  109 (208)
                      .+.+..++|+||+++|+|.+++....   .+++.....++.++                        ..+.         
T Consensus        55 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~  131 (237)
T cd05576          55 VSEDSVFLVLQHAEGGKLWSHISKFL---NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSR  131 (237)
T ss_pred             ecCCeEEEEEecCCCCCHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccc
Confidence            56788999999999999999997643   47888877777766                        0000         


Q ss_pred             ----ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccccc
Q 048710          110 ----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFD  175 (208)
Q Consensus       110 ----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  175 (208)
                          ........++..|+|||...+..++.++          |+++|..|+......            . ..    ...
T Consensus       132 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~-~~----~~~  194 (237)
T cd05576         132 WSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------I-NT----HTT  194 (237)
T ss_pred             hhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------c-cc----ccc
Confidence                0001123456789999999877778777          899998876522100            0 00    000


Q ss_pred             ccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          176 GLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       176 ~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..+    +......+.++..+|++.+ ++||++
T Consensus       195 ~~~----~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         195 LNI----PEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             cCC----cccCCHHHHHHHHHHccCCHHHhcCC
Confidence            011    1112234567777999999 999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.98  E-value=2.6e-09  Score=83.76  Aligned_cols=98  Identities=14%  Similarity=0.183  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhhcc-----------cCC--CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           49 NKLINEVVILSQIN-----------LET--EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~--~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+|+.++.+++           ...  +..|+|+||++ ++|.+++.....  .+++.....++.++          
T Consensus        49 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~  125 (293)
T cd07843          49 ITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN  125 (293)
T ss_pred             hhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            46788999999988           233  88999999998 599999876443  58899888888877          


Q ss_pred             --------------CC---------C-------CccccccccCCcCccCccccccC-CCCcce----------eEecCCC
Q 048710          106 --------------LA---------D-------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------~~---------~-------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~  144 (208)
                                    ..         +       .........++..|+|||.+.+. .++.++          |+++|..
T Consensus       126 ~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  205 (293)
T cd07843         126 WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP  205 (293)
T ss_pred             CeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC
Confidence                          00         0       00111234468889999998754 356666          9999999


Q ss_pred             CCCCC
Q 048710          145 PICLT  149 (208)
Q Consensus       145 p~~~~  149 (208)
                      |+...
T Consensus       206 ~f~~~  210 (293)
T cd07843         206 LFPGK  210 (293)
T ss_pred             CCCCC
Confidence            98743

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.98  E-value=1.9e-09  Score=84.26  Aligned_cols=98  Identities=15%  Similarity=0.228  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHhhcc-------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++..++                   ......++|+||++ ++|.+++...... .+++.....++.++    
T Consensus        44 ~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al  121 (288)
T cd07863          44 LSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPP-GLPAETIKDLMRQFLRGL  121 (288)
T ss_pred             hHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHH
Confidence            35667777777653                   12345799999998 5899998764332 57888888777776    


Q ss_pred             --------------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          ..       +        .........||..|+|||.+.+..++.++          |++
T Consensus       122 ~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~  201 (288)
T cd07863         122 DFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF  201 (288)
T ss_pred             HHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHH
Confidence                                00       0        00111234678999999999888888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      +|+.|+..
T Consensus       202 ~g~~~f~~  209 (288)
T cd07863         202 RRKPLFCG  209 (288)
T ss_pred             hCCcCcCC
Confidence            99999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.97  E-value=2e-10  Score=102.14  Aligned_cols=145  Identities=12%  Similarity=0.171  Sum_probs=88.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHH--HHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWE--MQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~--~r~~i~~~i-------  105 (208)
                      .......+|+.++..++           ..++..+|.||||++|+|.+.+...+.. .....  .-.+++.|+       
T Consensus      1276 k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~-dE~vt~vyt~qll~gla~LH~~g 1354 (1509)
T KOG4645|consen 1276 KTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIE-DEMVTRVYTKQLLEGLAYLHEHG 1354 (1509)
T ss_pred             ccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchh-hhhHHHHHHHHHHHHHHHHHhcC
Confidence            33456678999999988           7788899999999999999999876432 12222  223555555       


Q ss_pred             -----------------------------CCCCcc----ccccccCCcCccCccccccCCCCcce-------------eE
Q 048710          106 -----------------------------LADQTY----MTTQVQGTFGYLDLQYFQSSPFTEKS-------------NL  139 (208)
Q Consensus       106 -----------------------------~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ks-------------E~  139 (208)
                                                   ..+...    ......||+.|||||++.+..-.-+.             ||
T Consensus      1355 IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM 1434 (1509)
T KOG4645|consen 1355 IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEM 1434 (1509)
T ss_pred             ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEe
Confidence                                         001111    12357799999999999764322222             99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +||++|+....  .+   ...+. ++.-|..+++-. ++     .....++++   +|++.| .+|++
T Consensus      1435 ~tGkrPW~~~d--ne---~aIMy-~V~~gh~Pq~P~-~l-----s~~g~dFle---~Cl~~dP~~Rw~ 1487 (1509)
T KOG4645|consen 1435 ATGKRPWAELD--NE---WAIMY-HVAAGHKPQIPE-RL-----SSEGRDFLE---HCLEQDPKMRWT 1487 (1509)
T ss_pred             ecCCCchhhcc--ch---hHHHh-HHhccCCCCCch-hh-----hHhHHHHHH---HHHhcCchhhhH
Confidence            99999998431  11   11111 222233222111 11     233344555   999999 99975

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.97  E-value=1.4e-09  Score=82.55  Aligned_cols=143  Identities=20%  Similarity=0.263  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.-.+|+.+|+++.            .++..+|+|+|.|+.|.|.|+|.+.-   .++....-+|+.++          
T Consensus        66 ~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~  142 (411)
T KOG0599|consen   66 REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR  142 (411)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh
Confidence            345679999999988            66777899999999999999998642   45555555666655          


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCCCcce----------------eEe
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------------NLL  140 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------------E~~  140 (208)
                                                   ...........+||+||+|||.+....+....                .++
T Consensus       143 ~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  143 NIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             hhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence                                         11112223467899999999999765544333                567


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .|..||...       -.-.+...+.+|+..- -.|.    + .+.....-+|+.+|++.| .+|-|
T Consensus       223 aGcpPFwHR-------kQmlMLR~ImeGkyqF-~spe----W-adis~~~KdLIsrlLqVdp~~Rit  276 (411)
T KOG0599|consen  223 AGCPPFWHR-------KQMLMLRMIMEGKYQF-RSPE----W-ADISATVKDLISRLLQVDPTKRIT  276 (411)
T ss_pred             cCCCchhHH-------HHHHHHHHHHhccccc-CCcc----h-hhccccHHHHHHHHHeeCchhccc
Confidence            788888732       1112344455564311 0110    0 122223445666999999 99866

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.96  E-value=2.6e-09  Score=86.80  Aligned_cols=99  Identities=15%  Similarity=0.161  Sum_probs=69.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCC-----eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQIN-----------LETE-----VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~-----~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ..+.+.+|++++..++           ...+     ..|+|+||+. ++|.+++....   .+++.....++.++     
T Consensus        42 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~  117 (372)
T cd07853          42 SCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLK  117 (372)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHH
Confidence            3457889999999888           2223     7899999997 68888886543   57888777777666     


Q ss_pred             ----------------------------C--------CCCccccccccCCcCccCccccccC-CCCcce----------e
Q 048710          106 ----------------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------N  138 (208)
Q Consensus       106 ----------------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E  138 (208)
                                                  +        ...........+|..|+|||.+.+. .++.++          |
T Consensus       118 ~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  197 (372)
T cd07853         118 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE  197 (372)
T ss_pred             HHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence                                        0        0011112234578899999998764 466666          9


Q ss_pred             EecCCCCCCCC
Q 048710          139 LLTKEKPICLT  149 (208)
Q Consensus       139 ~~tg~~p~~~~  149 (208)
                      ++||+.||...
T Consensus       198 l~~g~~pf~~~  208 (372)
T cd07853         198 LLGRRILFQAQ  208 (372)
T ss_pred             HHcCCCCCCCC
Confidence            99999999743

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.96  E-value=3.8e-09  Score=82.11  Aligned_cols=98  Identities=15%  Similarity=0.215  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+..|+.++.+++           .+.+..++|+||++ ++|.+++.+...  .+++..+..++.++           
T Consensus        42 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          42 PSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             cHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456788999999887           56688999999998 699999987532  58888888888777           


Q ss_pred             -------------CC-------C--C-------ccccccccCCcCccCccccccC-CCCcce----------eEecCCCC
Q 048710          106 -------------LA-------D--Q-------TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~-------~--~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p  145 (208)
                                   ..       +  .       ........++..|+|||.+.+. .++.++          |+++|..|
T Consensus       119 i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  198 (282)
T cd07829         119 ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPL  198 (282)
T ss_pred             cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCC
Confidence                         00       0  0       0011123346789999998765 677777          99999988


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       199 ~~~  201 (282)
T cd07829         199 FPG  201 (282)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=2.3e-09  Score=86.03  Aligned_cols=60  Identities=18%  Similarity=0.322  Sum_probs=41.0

Q ss_pred             ccchhhHHHHHHHHHHHhh--cc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHh
Q 048710           42 LIYEGKVNKLINEVVILSQ--IN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVD  104 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~--l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~  104 (208)
                      .++......+.+|-++-+-  ||               ..-..++||.+|-++|||+|||...    .++-..-++++..
T Consensus       241 iF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS  316 (513)
T KOG2052|consen  241 IFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALS  316 (513)
T ss_pred             EecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHH
Confidence            4444556677788777664  33               3334588999999999999999874    4666555555544


Q ss_pred             C
Q 048710          105 S  105 (208)
Q Consensus       105 i  105 (208)
                      +
T Consensus       317 ~  317 (513)
T KOG2052|consen  317 I  317 (513)
T ss_pred             H
Confidence            4

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.95  E-value=7.5e-09  Score=84.79  Aligned_cols=96  Identities=17%  Similarity=0.117  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|++++.+++           ...+..++|+||+. |+|.+++....   .+++.....++.++           
T Consensus       127 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~  202 (391)
T PHA03212        127 RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENR  202 (391)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999998           55678899999995 78999987643   47888888877777           


Q ss_pred             ----------------------CCCCc--------cccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ----------------------LADQT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------------~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                            +-+..        .......||+.|+|||++.+..++.++          |++||..|
T Consensus       203 IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p  282 (391)
T PHA03212        203 IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS  282 (391)
T ss_pred             cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                                  00000        111235689999999999988888888          99999988


Q ss_pred             CC
Q 048710          146 IC  147 (208)
Q Consensus       146 ~~  147 (208)
                      +.
T Consensus       283 ~~  284 (391)
T PHA03212        283 LF  284 (391)
T ss_pred             cC
Confidence            64

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.95  E-value=2.5e-09  Score=83.64  Aligned_cols=148  Identities=13%  Similarity=0.188  Sum_probs=89.7

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhH---hhcCCCCCCCCHHHHHHHHHhC------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQY---INNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~---l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....|.+|+.++.++.            ...+..++++||+.. ++.++   +...... .+++.....++.++      
T Consensus        45 ~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~-~l~~~~~~~i~~~i~~~l~~  122 (288)
T cd06616          45 EQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKS-VIPEEILGKIAVATVKALNY  122 (288)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHH
Confidence            4567899999998875            556678899999874 55443   3322211 57777776666655      


Q ss_pred             -------------------CCC---------------CccccccccCCcCccCccccccC---CCCcce----------e
Q 048710          106 -------------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSS---PFTEKS----------N  138 (208)
Q Consensus       106 -------------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~---~~~~ks----------E  138 (208)
                                         ..+               .........|+..|+|||.+.+.   .++.++          |
T Consensus       123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  202 (288)
T cd06616         123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYE  202 (288)
T ss_pred             HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHH
Confidence                               000               00011234578899999998765   577777          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||....     .....+.... .+.     .+.+....+......+.+++.+||+.+ ++|||+
T Consensus       203 l~~g~~p~~~~~-----~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  261 (288)
T cd06616         203 VATGKFPYPKWN-----SVFDQLTQVV-KGD-----PPILSNSEEREFSPSFVNFINLCLIKDESKRPKY  261 (288)
T ss_pred             HHhCCCCchhcc-----hHHHHHhhhc-CCC-----CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCH
Confidence            999999987321     1212222111 111     112222222233446778888999999 999996

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.95  E-value=1.4e-09  Score=84.27  Aligned_cols=146  Identities=14%  Similarity=0.309  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cC---C---CeEEEEEeeCCCCChhhHhhcCC---CCCCCCHHHHHHHHHhC
Q 048710           46 GKVNKLINEVVILSQIN-----------LE---T---EVLLLVYEFISNGTVYQYINNQN---EEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~---~---~~~~lv~ey~~~GsL~~~l~~~~---~~~~l~~~~r~~i~~~i  105 (208)
                      ....++.+|++++++++           ..   .   ...++++||+++|+|.+++....   ....+++....+++.++
T Consensus        43 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i  122 (273)
T cd05074          43 SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDI  122 (273)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Confidence            34567999999999998           11   1   23478999999999999885321   22247787777777777


Q ss_pred             ------------------------C-------CCC--c---------cccccccCCcCccCccccccCCCCcce------
Q 048710          106 ------------------------L-------ADQ--T---------YMTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       106 ------------------------~-------~~~--~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                                              .       .+.  .         .......++..|++||......++.++      
T Consensus       123 ~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG  202 (273)
T cd05074         123 ASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFG  202 (273)
T ss_pred             HHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHH
Confidence                                    0       000  0         001122345789999999888888777      


Q ss_pred             ----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |+++ |..|+....   ...+    ......+...     .    .+......+.+++.+||+.+ ++|||+
T Consensus       203 ~il~el~~~g~~p~~~~~---~~~~----~~~~~~~~~~-----~----~~~~~~~~~~~l~~~~l~~~p~~Rps~  262 (273)
T cd05074         203 VTMWEIMTRGQTPYAGVE---NSEI----YNYLIKGNRL-----K----QPPDCLEDVYELMCQCWSPEPKCRPSF  262 (273)
T ss_pred             HHHHHHhhCCCCCCCCCC---HHHH----HHHHHcCCcC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence                8888 788876321   1111    1122222110     0    01123346778889999999 999996

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.94  E-value=1.2e-09  Score=87.67  Aligned_cols=97  Identities=16%  Similarity=0.174  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           48 VNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ...+.+|+.++..++                ......|+|+||+. ++|.+++....   .+++.....++.++      
T Consensus        48 ~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~  123 (337)
T cd07858          48 AKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKY  123 (337)
T ss_pred             hHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHH
Confidence            446778999999887                11135899999996 78999987643   57888888777776      


Q ss_pred             ------------------CC-------C--C-------ccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ------------------LA-------D--Q-------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ------------------~~-------~--~-------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                        ..       +  .       ........||..|+|||.+.+ ..++.++          |++
T Consensus       124 LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  203 (337)
T cd07858         124 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL  203 (337)
T ss_pred             HHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence                              00       0  0       011123457889999998764 4566777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      +|+.||..
T Consensus       204 ~g~~pf~~  211 (337)
T cd07858         204 GRKPLFPG  211 (337)
T ss_pred             cCCCCCCC
Confidence            99999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PTZ00284 protein kinase; Provisional

Probab=98.94  E-value=7e-09  Score=86.85  Aligned_cols=96  Identities=13%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHhhcc------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           49 NKLINEVVILSQIN------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      +++..|+.++.+++                  .+.+..++|+|++ +++|.+++.+..   .+++.....|+.++     
T Consensus       170 ~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~  245 (467)
T PTZ00284        170 RDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALD  245 (467)
T ss_pred             HHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHH
Confidence            45566777776654                  2346788999988 788999987643   57888777777666     


Q ss_pred             --------------------CCCC-----------------------------ccccccccCCcCccCccccccCCCCcc
Q 048710          106 --------------------LADQ-----------------------------TYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus       106 --------------------~~~~-----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                                          ..+.                             ........||..|+|||++.+..++.+
T Consensus       246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~  325 (467)
T PTZ00284        246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYS  325 (467)
T ss_pred             HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcH
Confidence                                0000                             001124568999999999999889888


Q ss_pred             e----------eEecCCCCCCC
Q 048710          137 S----------NLLTKEKPICL  148 (208)
Q Consensus       137 s----------E~~tg~~p~~~  148 (208)
                      +          |++||+.||..
T Consensus       326 ~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        326 TDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC
Confidence            7          99999999974

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.94  E-value=7.2e-09  Score=83.80  Aligned_cols=96  Identities=19%  Similarity=0.190  Sum_probs=67.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|+.++..++                 ......|+||||+++ +|.+.++.     .+++.....++.++    
T Consensus        63 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L  136 (359)
T cd07876          63 HAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGI  136 (359)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHH
Confidence            3567889999999887                 112357999999975 57666653     35666665555555    


Q ss_pred             --------------------CC-------C--------CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------LA-------D--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~~-------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          ..       |        .........||..|+|||.+.+..++.++          |++
T Consensus       137 ~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  216 (359)
T cd07876         137 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV  216 (359)
T ss_pred             HHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHH
Confidence                                00       0        01112335678999999999988888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       217 tg~~pf~~  224 (359)
T cd07876         217 KGSVIFQG  224 (359)
T ss_pred             hCCCCCCC
Confidence            99999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.94  E-value=4.1e-09  Score=88.78  Aligned_cols=103  Identities=22%  Similarity=0.328  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHhhcc-------------c----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-------------L----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+..-+|+++|.+++             .    ......+|||||++|||+..|.++++...|+..+-+.++.++    
T Consensus        54 ~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al  133 (732)
T KOG4250|consen   54 PRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSAL  133 (732)
T ss_pred             hHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHH
Confidence            3456789999999999             2    255678999999999999999999887789998888887777    


Q ss_pred             ---------------------------------------CCCCccccccccCCcCccCcccccc-CCCCcce--------
Q 048710          106 ---------------------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS--------  137 (208)
Q Consensus       106 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks--------  137 (208)
                                                             ..+......+..||.-|++||.... +.|+...        
T Consensus       134 ~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvt  213 (732)
T KOG4250|consen  134 RHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVT  213 (732)
T ss_pred             HHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhH
Confidence                                                   2223335578899999999999985 5666555        


Q ss_pred             --eEecCCCCCCCC
Q 048710          138 --NLLTKEKPICLT  149 (208)
Q Consensus       138 --E~~tg~~p~~~~  149 (208)
                        |.+||..||...
T Consensus       214 lY~caTG~lPF~p~  227 (732)
T KOG4250|consen  214 LYECATGELPFIPF  227 (732)
T ss_pred             HHHHhccCCCCCcC
Confidence              999999999854

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.93  E-value=4.9e-09  Score=84.60  Aligned_cols=96  Identities=17%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|+.++..++                 ......|+||||++ |+|.+++..     .+++.....++.++    
T Consensus        59 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~qi~~aL  132 (355)
T cd07874          59 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGI  132 (355)
T ss_pred             HHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh-----cCCHHHHHHHHHHHHHHH
Confidence            3467888999999887                 12245799999997 467777753     36676666565555    


Q ss_pred             --------------------C---------------CCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------L---------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          .               .+.........||..|+|||.+.+..++.++          |++
T Consensus       133 ~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~  212 (355)
T cd07874         133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV  212 (355)
T ss_pred             HHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence                                0               0011112335689999999999888888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       213 ~g~~pf~~  220 (355)
T cd07874         213 RHKILFPG  220 (355)
T ss_pred             hCCCCCCC
Confidence            99999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.93  E-value=8.3e-09  Score=83.60  Aligned_cols=96  Identities=16%  Similarity=0.169  Sum_probs=69.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|+.++..++                 ......|+||||++ ++|.+++..     .+++.....++.++    
T Consensus        66 ~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL  139 (364)
T cd07875          66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGI  139 (364)
T ss_pred             hHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh-----cCCHHHHHHHHHHHHHHH
Confidence            3467889999999887                 12245799999997 477777753     36677666666655    


Q ss_pred             --------------------C---------------CCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------L---------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          .               .+.........||..|+|||++.+..++.++          |++
T Consensus       140 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  219 (364)
T cd07875         140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  219 (364)
T ss_pred             HHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHH
Confidence                                0               0011112345689999999999988888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       220 ~g~~pf~~  227 (364)
T cd07875         220 KGGVLFPG  227 (364)
T ss_pred             hCCCCCCC
Confidence            99999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.92  E-value=1.6e-09  Score=85.67  Aligned_cols=97  Identities=16%  Similarity=0.198  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++.+++           ...+..++||||+++ +|.+++.....  .+++.....++.++            
T Consensus        49 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (309)
T cd07872          49 CTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRRKV  125 (309)
T ss_pred             hhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            46788999999987           667789999999985 89888876543  46777776666655            


Q ss_pred             ------------C-------CC---------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ------------L-------AD---------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~-------~~---------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                  .       .+         .........+|..|+|||.+.+ ..++.++          |++||+.||
T Consensus       126 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf  205 (309)
T cd07872         126 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLF  205 (309)
T ss_pred             ecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                        0       00         0011123457899999998865 4566666          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       206 ~~  207 (309)
T cd07872         206 PG  207 (309)
T ss_pred             CC
Confidence            74

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.92  E-value=1.3e-09  Score=87.34  Aligned_cols=97  Identities=15%  Similarity=0.228  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           48 VNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ...+.+|+.++.+++               ......++|+||+. |+|.+++....   .+++.....++.++       
T Consensus        48 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~L  123 (334)
T cd07855          48 AKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYI  123 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHH
Confidence            456788999999887               13457899999996 79999997543   47888887777766       


Q ss_pred             -----------------CCC-----------------C---ccccccccCCcCccCcccccc-CCCCcce----------
Q 048710          106 -----------------LAD-----------------Q---TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------  137 (208)
Q Consensus       106 -----------------~~~-----------------~---~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------  137 (208)
                                       ..+                 .   ........|+..|+|||.+.+ ..++.++          
T Consensus       124 H~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~  203 (334)
T cd07855         124 HSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA  203 (334)
T ss_pred             HHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence                             000                 0   000123467889999998765 4566666          


Q ss_pred             eEecCCCCCCC
Q 048710          138 NLLTKEKPICL  148 (208)
Q Consensus       138 E~~tg~~p~~~  148 (208)
                      |+++|+.||..
T Consensus       204 el~~g~~pf~~  214 (334)
T cd07855         204 EMLGRRQLFPG  214 (334)
T ss_pred             HHHcCCCccCC
Confidence            99999999974

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.91  E-value=7.2e-09  Score=80.61  Aligned_cols=152  Identities=14%  Similarity=0.108  Sum_probs=90.9

Q ss_pred             HHHHHHHHHhhcc------------cCC--CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           50 KLINEVVILSQIN------------LET--EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~------------~~~--~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.+|+.++.++.            .+.  +..++|+||++ |+|.+++.+...  .++|.+...++.++          
T Consensus        43 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~  119 (282)
T cd07831          43 NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHRN  119 (282)
T ss_pred             hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4457888888764            333  78999999997 689998876443  58999988888877          


Q ss_pred             --------------CCC--------------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 --------------LAD--------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 --------------~~~--------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                    ..+              .........++..|+|||...+ +.++.++          |+++|..||
T Consensus       120 ~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~  199 (282)
T cd07831         120 GIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLF  199 (282)
T ss_pred             CceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCC
Confidence                          000              0001122346889999997654 4556666          999999998


Q ss_pred             CCCCccCCccHHHHHHHHH-----------hcCcccccccccccc----cCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAM-----------KEDRLFEIFDGLVLK----EGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~d~~l~~----~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....   ...........           ..........+....    .........+.+++.+||+.+ ++||++
T Consensus       200 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  273 (282)
T cd07831         200 PGTNE---LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA  273 (282)
T ss_pred             CCCCH---HHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCH
Confidence            74321   11111111111           001000110110000    001133567788899999999 999996

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.91  E-value=8.1e-09  Score=80.94  Aligned_cols=99  Identities=11%  Similarity=0.157  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHhhcc------------cC-----CCeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN------------LE-----TEVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~-----~~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++            ..     ....|+||||+++ +|.+++.....  ...+++.....++.++    
T Consensus        45 ~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L  123 (295)
T cd07837          45 PTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV  123 (295)
T ss_pred             hHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence            56888999998875            11     2237999999995 89998865321  2357888888888877    


Q ss_pred             --------------------CC-CCc----------------cccccccCCcCccCcccccc-CCCCcce----------
Q 048710          106 --------------------LA-DQT----------------YMTTQVQGTFGYLDLQYFQS-SPFTEKS----------  137 (208)
Q Consensus       106 --------------------~~-~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------  137 (208)
                                          .. +..                .......+++.|+|||++.+ ..++.++          
T Consensus       124 ~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  203 (295)
T cd07837         124 AHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFA  203 (295)
T ss_pred             HHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHH
Confidence                                11 100                00011235778999998865 4566666          


Q ss_pred             eEecCCCCCCC
Q 048710          138 NLLTKEKPICL  148 (208)
Q Consensus       138 E~~tg~~p~~~  148 (208)
                      |++||..|+..
T Consensus       204 ~l~~g~~~~~~  214 (295)
T cd07837         204 EMSRKQPLFPG  214 (295)
T ss_pred             HHHcCCCCCCC
Confidence            99999999863

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.91  E-value=2.4e-09  Score=83.82  Aligned_cols=97  Identities=13%  Similarity=0.160  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|++++.+++           .+.+..++||||++ |+|.+++.....  .+++.....++.++            
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~~i  124 (291)
T cd07844          48 FTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQRRV  124 (291)
T ss_pred             hhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45778999999987           66788999999998 599999976543  46777666666655            


Q ss_pred             ------------CC-------CC---------ccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ------------LA-------DQ---------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ------------~~-------~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                  ..       +.         ........++..|+|||...+ ..++.++          |+++|+.||
T Consensus       125 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~  204 (291)
T cd07844         125 LHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF  204 (291)
T ss_pred             ecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence                        00       00         000112346788999999875 4466666          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       205 ~~  206 (291)
T cd07844         205 PG  206 (291)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.90  E-value=2.7e-09  Score=91.46  Aligned_cols=144  Identities=18%  Similarity=0.209  Sum_probs=98.2

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------------cC--CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHh
Q 048710           44 YEGKVNKLINEVVILSQIN-----------------LE--TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVD  104 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------------~~--~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~  104 (208)
                      ++...+...+|+++|.+|+                 .+  .-+++|.||||+||+|-+++...... .|+..+.|+|+.+
T Consensus        74 de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~d  152 (738)
T KOG1989|consen   74 DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYD  152 (738)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHH
Confidence            6677889999999999999                 11  24688999999999999999864433 4999999999998


Q ss_pred             C---------------------------------------------CCCCcccc------ccccCCcCccCccccc---c
Q 048710          105 S---------------------------------------------LADQTYMT------TQVQGTFGYLDLQYFQ---S  130 (208)
Q Consensus       105 i---------------------------------------------~~~~~~~~------~~~~gt~~y~aPE~~~---~  130 (208)
                      +                                             ........      ....=|+.|-+||++.   +
T Consensus       153 v~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg  232 (738)
T KOG1989|consen  153 VCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSG  232 (738)
T ss_pred             HHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcC
Confidence            8                                             00000000      0111378999999984   6


Q ss_pred             CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcC
Q 048710          131 SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL  200 (208)
Q Consensus       131 ~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~  200 (208)
                      ...++|+          -++-...||..                   +.-..+++....-...+.....+..|+..|++.
T Consensus       233 ~pI~eKsDIWALGclLYkLCy~t~PFe~-------------------sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~  293 (738)
T KOG1989|consen  233 LPIGEKSDIWALGCLLYKLCYFTTPFEE-------------------SGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQP  293 (738)
T ss_pred             CCCcchhHHHHHHHHHHHHHHhCCCcCc-------------------CcceeEEeccccCCCCccHHHHHHHHHHHHhcc
Confidence            6777887          33335566552                   112233443332222246677778888899999


Q ss_pred             C-CCCCCC
Q 048710          201 N-EKKPTM  207 (208)
Q Consensus       201 ~-~~RPsm  207 (208)
                      + ++||++
T Consensus       294 nP~~RPnI  301 (738)
T KOG1989|consen  294 NPDERPNI  301 (738)
T ss_pred             CcccCCCH
Confidence            9 999985

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.90  E-value=7.2e-09  Score=81.30  Aligned_cols=99  Identities=10%  Similarity=0.110  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|++++.+++           .+.+..++|+||++ ++|.+++...... .+++.....++.++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         45 PSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             hHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356889999999988           66788999999996 6888888654322 34555544444444           


Q ss_pred             -------------C-CCCc----------------cccccccCCcCccCcccccc-CCCCcce----------eEecCCC
Q 048710          106 -------------L-ADQT----------------YMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------~-~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~  144 (208)
                                   . .+..                .......|++.|+|||++.+ ..++.++          |++||..
T Consensus       123 i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~  202 (294)
T PLN00009        123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKP  202 (294)
T ss_pred             eeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                         0 0000                00112345789999998865 3456666          9999999


Q ss_pred             CCCC
Q 048710          145 PICL  148 (208)
Q Consensus       145 p~~~  148 (208)
                      |+..
T Consensus       203 pf~~  206 (294)
T PLN00009        203 LFPG  206 (294)
T ss_pred             CCCC
Confidence            9864

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.89  E-value=2e-09  Score=85.86  Aligned_cols=99  Identities=15%  Similarity=0.173  Sum_probs=72.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCC-----CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQIN-----------LET-----EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~-----~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ..+.|.+|+.++..++           ...     +..|+|+||++ ++|.+++.+..   .+++.....++.++     
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~  117 (330)
T cd07834          42 DAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLK  117 (330)
T ss_pred             hhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHH
Confidence            3467899999999987           222     37899999998 58999997643   58888888877777     


Q ss_pred             -------------------C----------------CCCc---cccccccCCcCccCccccccC-CCCcce---------
Q 048710          106 -------------------L----------------ADQT---YMTTQVQGTFGYLDLQYFQSS-PFTEKS---------  137 (208)
Q Consensus       106 -------------------~----------------~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~ks---------  137 (208)
                                         .                ....   .......+|..|+|||.+.+. .++.++         
T Consensus       118 ~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il  197 (330)
T cd07834         118 YLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF  197 (330)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence                               0                0000   012234568889999999877 677777         


Q ss_pred             -eEecCCCCCCCC
Q 048710          138 -NLLTKEKPICLT  149 (208)
Q Consensus       138 -E~~tg~~p~~~~  149 (208)
                       |++||..||...
T Consensus       198 ~~l~~g~~pf~~~  210 (330)
T cd07834         198 AELLTRKPLFPGR  210 (330)
T ss_pred             HHHHcCCCCcCCC
Confidence             999999998743

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.89  E-value=5.7e-09  Score=82.03  Aligned_cols=145  Identities=12%  Similarity=0.199  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|+.++.+..            ...+..|+|+||+. ++|.+++.....  .+++..+..++.++          
T Consensus        57 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~  133 (296)
T cd06618          57 NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEK  133 (296)
T ss_pred             HHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhh
Confidence            345677777666554            56778999999985 577777655333  58888888777776          


Q ss_pred             ---------------CCC---------------CccccccccCCcCccCccccccCC----CCcce----------eEec
Q 048710          106 ---------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSP----FTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~----~~~ks----------E~~t  141 (208)
                                     ..+               .........|+..|+|||.+.+..    ++.++          |+++
T Consensus       134 ~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~  213 (296)
T cd06618         134 HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT  213 (296)
T ss_pred             CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh
Confidence                           000               000112234678999999987654    56666          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+.|+.....    . .+...... .+...     .+...  ......+.+++.+||+.+ ++||++.
T Consensus       214 g~~p~~~~~~----~-~~~~~~~~-~~~~~-----~~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~  268 (296)
T cd06618         214 GQFPYKNCKT----E-FEVLTKIL-QEEPP-----SLPPN--EGFSPDFCSFVDLCLTKDHRKRPKYR  268 (296)
T ss_pred             CCCCCCcchh----H-HHHHHHHh-cCCCC-----CCCCC--CCCCHHHHHHHHHHccCChhhCCCHH
Confidence            9999863211    0 11111111 11111     11100  012345677888999999 9999973

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.89  E-value=1.6e-08  Score=87.19  Aligned_cols=150  Identities=17%  Similarity=0.161  Sum_probs=96.5

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+.+...+...|-.++..++                 ...+.++||||||.+||.-|.+.+-.+. .+.|....=|+.++
T Consensus        54 ~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~-rl~E~~IaYI~re~  132 (953)
T KOG0587|consen   54 PTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGN-RLKEEWIAYILREI  132 (953)
T ss_pred             CCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhccc-chhhHHHHHHHHHH
Confidence            34445567788888888877                 7789999999999999999999886533 67777665565555


Q ss_pred             ---------------------------------------CCCCcc-ccccccCCcCccCccccccC---CCC--cce---
Q 048710          106 ---------------------------------------LADQTY-MTTQVQGTFGYLDLQYFQSS---PFT--EKS---  137 (208)
Q Consensus       106 ---------------------------------------~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~--~ks---  137 (208)
                                                             ..+.+. ...+-.||+.|||||++...   .++  ..+   
T Consensus       133 lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~W  212 (953)
T KOG0587|consen  133 LRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLW  212 (953)
T ss_pred             HHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchh
Confidence                                                   111111 23456799999999999642   222  222   


Q ss_pred             -------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                             |+.-|..|...+      +.   ++.++   .++.--.|.+.  .+..=...+.+.+..|+..+ .+||+|
T Consensus       213 sLGITaIEladG~PPl~Dm------HP---mraLF---~IpRNPPPkLk--rp~kWs~~FndFIs~cL~Kd~e~RP~~  276 (953)
T KOG0587|consen  213 SLGITAIEMAEGAPPLCDM------HP---MRALF---LIPRNPPPKLK--RPKKWSKKFNDFISTCLVKDYEQRPST  276 (953)
T ss_pred             hccceeehhcCCCCCccCc------ch---hhhhc---cCCCCCCcccc--chhhHHHHHHHHHHHHHhhccccCcch
Confidence                   777777776643      11   11111   11111223332  22344455667777999999 999987

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.88  E-value=1.1e-08  Score=81.92  Aligned_cols=97  Identities=12%  Similarity=0.150  Sum_probs=68.3

Q ss_pred             hHHHHHHHHHHHhhc-c-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           47 KVNKLINEVVILSQI-N-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ....+.+|+.++.++ +             .+....++|+||++ ++|.+++.+.    .++|..+..++.++       
T Consensus        49 ~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~L  123 (337)
T cd07852          49 DAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYI  123 (337)
T ss_pred             hhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHH
Confidence            345678899999999 5             22346899999998 6999999764    47788777777766       


Q ss_pred             --------------------------CC---------CCc---cccccccCCcCccCcccccc-CCCCcce---------
Q 048710          106 --------------------------LA---------DQT---YMTTQVQGTFGYLDLQYFQS-SPFTEKS---------  137 (208)
Q Consensus       106 --------------------------~~---------~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~ks---------  137 (208)
                                                +.         ...   .......||..|+|||.+.+ ..++.++         
T Consensus       124 H~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l  203 (337)
T cd07852         124 HSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL  203 (337)
T ss_pred             HHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHH
Confidence                                      00         000   11123457889999998764 4456666         


Q ss_pred             -eEecCCCCCCC
Q 048710          138 -NLLTKEKPICL  148 (208)
Q Consensus       138 -E~~tg~~p~~~  148 (208)
                       |++||+.|+..
T Consensus       204 ~el~tg~~pf~~  215 (337)
T cd07852         204 GEMLLGKPLFPG  215 (337)
T ss_pred             HHHHhCCCCCCC
Confidence             99999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.87  E-value=6e-09  Score=86.66  Aligned_cols=98  Identities=13%  Similarity=0.128  Sum_probs=64.1

Q ss_pred             HHHHHHHHHhhcc----c---------------CCCeEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC----
Q 048710           50 KLINEVVILSQIN----L---------------ETEVLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~----~---------------~~~~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i----  105 (208)
                      ...+|+.+|.+++    .               ....+++||||++ |+|.+++... .....+++.....++.++    
T Consensus       105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL  183 (440)
T PTZ00036        105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRAL  183 (440)
T ss_pred             hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            3567999999987    0               1124679999998 5787777531 111257777666555554    


Q ss_pred             --------------------CCC----------------CccccccccCCcCccCcccccc-CCCCcce----------e
Q 048710          106 --------------------LAD----------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------N  138 (208)
Q Consensus       106 --------------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E  138 (208)
                                          ..+                .........||..|+|||++.+ ..++.++          |
T Consensus       184 ~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  263 (440)
T PTZ00036        184 AYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE  263 (440)
T ss_pred             HHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence                                000                0011123467899999999865 4677777          9


Q ss_pred             EecCCCCCCC
Q 048710          139 LLTKEKPICL  148 (208)
Q Consensus       139 ~~tg~~p~~~  148 (208)
                      ++||..||..
T Consensus       264 lltG~~pf~~  273 (440)
T PTZ00036        264 MILGYPIFSG  273 (440)
T ss_pred             HHhCCCCCCC
Confidence            9999999874

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.86  E-value=3.7e-08  Score=77.11  Aligned_cols=97  Identities=12%  Similarity=0.103  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++..++           ...+..++|+||+. ++|.+++.....  .+.+.....++.++            
T Consensus        48 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i  124 (291)
T cd07870          48 FTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQHI  124 (291)
T ss_pred             HHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            46788999999887           56678999999996 788888765433  46777766677665            


Q ss_pred             ---------------------CCC-------CccccccccCCcCccCccccccC-CCCcce----------eEecCCCCC
Q 048710          106 ---------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~  146 (208)
                                           +-+       .........+++.|+|||.+.+. .++.++          |++||..||
T Consensus       125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f  204 (291)
T cd07870         125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAF  204 (291)
T ss_pred             ccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                                 000       00011223468899999998753 355555          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       205 ~~  206 (291)
T cd07870         205 PG  206 (291)
T ss_pred             CC
Confidence            74

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.85  E-value=1.6e-08  Score=81.53  Aligned_cols=96  Identities=16%  Similarity=0.178  Sum_probs=67.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|+.++.+++                 .+....|+|+||+. |+|.+.+...     +++.....++.++    
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL  131 (353)
T cd07850          58 HAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGI  131 (353)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHH
Confidence            3456788999999887                 11235799999996 5888888642     5666665555555    


Q ss_pred             --------------------CC---------------CCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 --------------------LA---------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 --------------------~~---------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                          ..               +.........||..|+|||.+.+..++.++          |++
T Consensus       132 ~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~  211 (353)
T cd07850         132 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  211 (353)
T ss_pred             HHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHH
Confidence                                00               001111234578899999999988888887          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      +|+.||..
T Consensus       212 ~g~~pf~~  219 (353)
T cd07850         212 RGTVLFPG  219 (353)
T ss_pred             HCCCCCCC
Confidence            99999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.85  E-value=2.7e-09  Score=85.44  Aligned_cols=97  Identities=15%  Similarity=0.165  Sum_probs=66.9

Q ss_pred             hHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ....+..|+.++.+++                ......|+|+||++ ++|.+.+...    .+++.....++.++     
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~  120 (336)
T cd07849          46 FCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLK  120 (336)
T ss_pred             hHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHH
Confidence            3456889999999987                12245899999997 5888888653    47777777766665     


Q ss_pred             -------------------CC-------C--C----------ccccccccCCcCccCcccccc-CCCCcce---------
Q 048710          106 -------------------LA-------D--Q----------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS---------  137 (208)
Q Consensus       106 -------------------~~-------~--~----------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks---------  137 (208)
                                         ..       +  .          ........||..|+|||.+.+ ..++.++         
T Consensus       121 ~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil  200 (336)
T cd07849         121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL  200 (336)
T ss_pred             HHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence                               00       0  0          000122457889999998754 4566666         


Q ss_pred             -eEecCCCCCCC
Q 048710          138 -NLLTKEKPICL  148 (208)
Q Consensus       138 -E~~tg~~p~~~  148 (208)
                       |++||+.||..
T Consensus       201 ~el~~G~~~f~~  212 (336)
T cd07849         201 AEMLSNRPLFPG  212 (336)
T ss_pred             HHHHhCCCCCCC
Confidence             99999999863

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.85  E-value=1.3e-08  Score=81.51  Aligned_cols=52  Identities=13%  Similarity=0.291  Sum_probs=41.8

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+.+|++++.+++           ...+..++|+||++ |+|.+++....   .+++.....++.++
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql  128 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQI  128 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            5789999999987           56778999999997 79999997543   47777777777766

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.85  E-value=5.8e-09  Score=82.04  Aligned_cols=98  Identities=16%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cC----------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-
Q 048710           48 VNKLINEVVILSQIN-----------LE----------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~----------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-  105 (208)
                      ...+.+|++++.+++           .+          .+..++|+||+++ ++.+.+.....  .+++.....++.++ 
T Consensus        50 ~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~  126 (302)
T cd07864          50 PITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLV--HFSEDHIKSFMKQLL  126 (302)
T ss_pred             hHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCC--CCCHHHHHHHHHHHH
Confidence            356788999999987           11          2378999999986 77777765422  58888888888777 


Q ss_pred             -----------------------CC-------CC--c--------cccccccCCcCccCcccccc-CCCCcce-------
Q 048710          106 -----------------------LA-------DQ--T--------YMTTQVQGTFGYLDLQYFQS-SPFTEKS-------  137 (208)
Q Consensus       106 -----------------------~~-------~~--~--------~~~~~~~gt~~y~aPE~~~~-~~~~~ks-------  137 (208)
                                             ..       +.  .        .......++..|++||.+.+ ..++.++       
T Consensus       127 ~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~  206 (302)
T cd07864         127 EGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC  206 (302)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHH
Confidence                                   00       00  0        00112245778999998864 3456666       


Q ss_pred             ---eEecCCCCCCC
Q 048710          138 ---NLLTKEKPICL  148 (208)
Q Consensus       138 ---E~~tg~~p~~~  148 (208)
                         |+++|+.||..
T Consensus       207 ~~~el~~g~~~~~~  220 (302)
T cd07864         207 ILGELFTKKPIFQA  220 (302)
T ss_pred             HHHHHHhCCCCCCC
Confidence               99999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.84  E-value=9e-09  Score=80.15  Aligned_cols=144  Identities=13%  Similarity=0.192  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC----------
Q 048710           49 NKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .++..|+..+.+. +           ...+..++|+||++ |+|.+++... .....+++.....++.++          
T Consensus        44 ~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          44 KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            4566666654332 2           55677999999997 7898888652 122258888887777766          


Q ss_pred             ---------------CCC---------------CccccccccCCcCccCcccccc----CCCCcce----------eEec
Q 048710          106 ---------------LAD---------------QTYMTTQVQGTFGYLDLQYFQS----SPFTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~----~~~~~ks----------E~~t  141 (208)
                                     ..+               .........|+..|+|||.+.+    ..++.++          |++|
T Consensus       123 ~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~  202 (283)
T cd06617         123 LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT  202 (283)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh
Confidence                           000               0001122457889999998864    3345555          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.|+....    ... ..+.... .+..     +.+..   ......+.+++..||+.+ ++||++
T Consensus       203 g~~p~~~~~----~~~-~~~~~~~-~~~~-----~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~  255 (283)
T cd06617         203 GRFPYDSWK----TPF-QQLKQVV-EEPS-----PQLPA---EKFSPEFQDFVNKCLKKNYKERPNY  255 (283)
T ss_pred             CCCCCCccc----cCH-HHHHHHH-hcCC-----CCCCc---cccCHHHHHHHHHHccCChhhCcCH
Confidence            999986321    111 1111111 1111     11111   112345667888999999 999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=3.9e-09  Score=93.06  Aligned_cols=99  Identities=22%  Similarity=0.342  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHH--HHHHHhC----------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQ--LHIVVDS----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r--~~i~~~i----------  105 (208)
                      --|..|-.+|.--+           .+++.+|+|||||+||+|-..|.+.. ..+-+|..=  ..|+..+          
T Consensus       120 A~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVH  198 (1317)
T KOG0612|consen  120 ACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVH  198 (1317)
T ss_pred             HHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcccee
Confidence            46888888887665           89999999999999999999998765 224556521  2233322          


Q ss_pred             ---------------------------CCCCccccccccCCcCccCcccccc-----CCCCcce----------eEecCC
Q 048710          106 ---------------------------LADQTYMTTQVQGTFGYLDLQYFQS-----SPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ---------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ks----------E~~tg~  143 (208)
                                                 ..++...+...+|||-|++||+++.     +.|++..          ||+.|.
T Consensus       199 RDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~  278 (1317)
T KOG0612|consen  199 RDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGE  278 (1317)
T ss_pred             ccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCC
Confidence                                       3355566678899999999999963     4556555          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||..
T Consensus       279 TPFYa  283 (1317)
T KOG0612|consen  279 TPFYA  283 (1317)
T ss_pred             CcchH
Confidence            99973

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=7.1e-09  Score=86.21  Aligned_cols=147  Identities=14%  Similarity=0.189  Sum_probs=95.6

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      +-+...+++.++|++.|.+++           ......+||||||- ||-.|.|.-.++  ++.......|+.|+     
T Consensus        64 KQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkK--plqEvEIAAi~~gaL~gLa  140 (948)
T KOG0577|consen   64 KQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLA  140 (948)
T ss_pred             cccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHH
Confidence            445667899999999999999           45555679999997 788888765544  46666667777776     


Q ss_pred             ----------------------------CCC---CccccccccCCcCccCccccc---cCCCCcce----------eEec
Q 048710          106 ----------------------------LAD---QTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------------~~~---~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~t  141 (208)
                                                  +-+   ....+.+.+||+.|||||++.   .+.|+.|.          |+.-
T Consensus       141 YLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE  220 (948)
T KOG0577|consen  141 YLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  220 (948)
T ss_pred             HHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhh
Confidence                                        001   111235678999999999986   46777777          7777


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .+.|+-.++      -..-++ ++..++     .|.+.   ..+=...+....-.|++.- .+|||
T Consensus       221 RkPPlFnMN------AMSALY-HIAQNe-----sPtLq---s~eWS~~F~~Fvd~CLqKipqeRpt  271 (948)
T KOG0577|consen  221 RKPPLFNMN------AMSALY-HIAQNE-----SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPT  271 (948)
T ss_pred             cCCCccCch------HHHHHH-HHHhcC-----CCCCC---CchhHHHHHHHHHHHHhhCcccCCc
Confidence            788876432      111111 111111     22222   1222334555566999999 99998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.82  E-value=7.9e-09  Score=81.46  Aligned_cols=97  Identities=14%  Similarity=0.118  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHhhcc-----------c--------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-----------L--------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~--------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++           .        .....++|+||+. ++|.+++.....  .+++.....++.++    
T Consensus        56 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al  132 (310)
T cd07865          56 ITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNV--KFTLSEIKKVMKMLLNGL  132 (310)
T ss_pred             hHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhccc--CCCHHHHHHHHHHHHHHH
Confidence            35678999999887           1        1245699999997 588888876433  47888887777777    


Q ss_pred             --------------------CC-------C--Cc-----------cccccccCCcCccCccccccC-CCCcce-------
Q 048710          106 --------------------LA-------D--QT-----------YMTTQVQGTFGYLDLQYFQSS-PFTEKS-------  137 (208)
Q Consensus       106 --------------------~~-------~--~~-----------~~~~~~~gt~~y~aPE~~~~~-~~~~ks-------  137 (208)
                                          ..       +  ..           .......++..|+|||.+.+. .++.++       
T Consensus       133 ~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  212 (310)
T cd07865         133 YYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC  212 (310)
T ss_pred             HHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence                                00       0  00           001123467889999988654 356666       


Q ss_pred             ---eEecCCCCCCC
Q 048710          138 ---NLLTKEKPICL  148 (208)
Q Consensus       138 ---E~~tg~~p~~~  148 (208)
                         |++||..|+..
T Consensus       213 ~l~el~t~~~~~~~  226 (310)
T cd07865         213 IMAEMWTRSPIMQG  226 (310)
T ss_pred             HHHHHHhCCCCCCC
Confidence               99999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.82  E-value=2.7e-08  Score=78.82  Aligned_cols=99  Identities=14%  Similarity=0.223  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC------CCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN------EEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~------~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++             ......++|+||++ ++|.+++....      ....+++.....++.++    
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (317)
T cd07867          43 MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI  121 (317)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH
Confidence            46789999999987             34567899999987 57877775321      12247777777777766    


Q ss_pred             -------------------C--C-CC---------------------ccccccccCCcCccCcccccc-CCCCcce----
Q 048710          106 -------------------L--A-DQ---------------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----  137 (208)
Q Consensus       106 -------------------~--~-~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----  137 (208)
                                         .  . +.                     ........||+.|+|||.+.+ ..++.++    
T Consensus       122 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS  201 (317)
T cd07867         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA  201 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHh
Confidence                               0  0 00                     001123457899999999876 4467776    


Q ss_pred             ------eEecCCCCCCC
Q 048710          138 ------NLLTKEKPICL  148 (208)
Q Consensus       138 ------E~~tg~~p~~~  148 (208)
                            |++||+.||..
T Consensus       202 lG~il~el~tg~~~f~~  218 (317)
T cd07867         202 IGCIFAELLTSEPIFHC  218 (317)
T ss_pred             HHHHHHHHHhCCCCccc
Confidence                  99999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.81  E-value=4.2e-08  Score=78.80  Aligned_cols=96  Identities=13%  Similarity=0.107  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.+|+.++.+++                 ......|+++|++ +++|.+++...    .+++.....++.++     
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~  132 (343)
T cd07878          58 ARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLK  132 (343)
T ss_pred             HHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHH
Confidence            356788999999987                 1124578999987 78999888643    47788777777766     


Q ss_pred             -------------------CCC-------------CccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------LAD-------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                         ..+             .........||..|+|||++.+ ..++.++          |+++|
T Consensus       133 ~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  212 (343)
T cd07878         133 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG  212 (343)
T ss_pred             HHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC
Confidence                               000             0011223468999999999876 4567666          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       213 ~~pf~~  218 (343)
T cd07878         213 KALFPG  218 (343)
T ss_pred             CCCCCC
Confidence            999863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.80  E-value=2.3e-08  Score=79.95  Aligned_cols=97  Identities=11%  Similarity=0.120  Sum_probs=66.1

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|+.++.+++            ...+..++|+||+ +++|.+++...    .+++.....++.++         
T Consensus        52 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~  126 (328)
T cd07856          52 LAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHS  126 (328)
T ss_pred             hhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3467889999999987            3356789999998 57999988753    35565555555544         


Q ss_pred             ---------------CC-------C--C----ccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ---------------LA-------D--Q----TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------~~-------~--~----~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                     ..       +  .    ........++..|+|||.+.+ ..++.++          |++||+.|+
T Consensus       127 ~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f  206 (328)
T cd07856         127 AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF  206 (328)
T ss_pred             CCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence                           00       0  0    000122346789999998765 5567776          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       207 ~~  208 (328)
T cd07856         207 PG  208 (328)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.80  E-value=1.2e-08  Score=80.69  Aligned_cols=96  Identities=15%  Similarity=0.196  Sum_probs=67.9

Q ss_pred             HHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           50 KLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.+|+.++.+++             ...+..++|+||+. ++|.+++.....  .+++.+...++.++           
T Consensus        52 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          52 SSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             hhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5678999999988             23356899999997 589998876433  58898888888877           


Q ss_pred             -------------CC-------C---------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -------------LA-------D---------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~-------~---------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                   ..       +         .........++..|+|||.+.+ ..++.++          |+++|..|
T Consensus       129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~  208 (309)
T cd07845         129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPL  208 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCC
Confidence                         00       0         0011122335778999999865 4456666          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      +..
T Consensus       209 f~~  211 (309)
T cd07845         209 LPG  211 (309)
T ss_pred             CCC
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=1.8e-08  Score=80.68  Aligned_cols=86  Identities=17%  Similarity=0.229  Sum_probs=65.8

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCC-CCCHHHHHHHHHhC------------------------------------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEF-PIAWEMQLHIVVDS------------------------------------  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~-~l~~~~r~~i~~~i------------------------------------  105 (208)
                      ...+.+|+||||+.||+|-=+|+.-++.+ +...-....||+|+                                    
T Consensus       420 QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  420 QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  499 (683)
T ss_pred             hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccc
Confidence            78899999999999999999998654321 33444566777777                                    


Q ss_pred             CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                      ..-....+.+.+||+-|+|||.+...+|+...          |++.|+.||+.
T Consensus       500 ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  500 NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            01112234567899999999999999998776          99999999984

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=3.8e-08  Score=82.71  Aligned_cols=150  Identities=14%  Similarity=0.148  Sum_probs=97.5

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ..+.....+|+-|++||+.++           +-.+.+++..|||.||.++..+-+-+.  .|+..+.--++.++     
T Consensus        67 tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn  144 (1187)
T KOG0579|consen   67 TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALN  144 (1187)
T ss_pred             ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHH
Confidence            345556789999999999988           778889999999999999998776443  46666554444444     


Q ss_pred             ----------------------------CCCCcc-------ccccccCCcCccCcccccc-----CCCCcce--------
Q 048710          106 ----------------------------LADQTY-------MTTQVQGTFGYLDLQYFQS-----SPFTEKS--------  137 (208)
Q Consensus       106 ----------------------------~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~ks--------  137 (208)
                                                  +-+.+.       ......||+.|||||+...     .+|+-++        
T Consensus       145 ~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT  224 (1187)
T KOG0579|consen  145 WLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT  224 (1187)
T ss_pred             HHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence                                        111111       1246789999999999864     4555555        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        ||.-+..|....+      ....+ -.+.....+-++.|.       .=...+-++...|+..+ +.||+-
T Consensus       225 LIEMAqiEPPHheln------pMRVl-lKiaKSePPTLlqPS-------~Ws~~F~DfLk~cL~Knp~~Rp~a  283 (1187)
T KOG0579|consen  225 LIEMAQIEPPHHELN------PMRVL-LKIAKSEPPTLLQPS-------HWSRSFSDFLKRCLVKNPRNRPPA  283 (1187)
T ss_pred             HHHHhccCCCccccc------hHHHH-HHHhhcCCCcccCcc-------hhhhHHHHHHHHHHhcCCccCCCH
Confidence              8887887766321      21111 123333433333332       11223456666999999 999973

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.77  E-value=2e-08  Score=82.45  Aligned_cols=140  Identities=19%  Similarity=0.210  Sum_probs=89.8

Q ss_pred             HHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHH--HHHHHHhC----------
Q 048710           50 KLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEM--QLHIVVDS----------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~--r~~i~~~i----------  105 (208)
                      =...|-.+|.+|+            .+...+|+|+||++||+|-++|++.+.. .-.|.+  ..+|+-.+          
T Consensus       119 YV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsf-de~caR~YAAeIldAleylH~~GIIH  197 (604)
T KOG0592|consen  119 YVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSF-DETCARFYAAEILDALEYLHSNGIIH  197 (604)
T ss_pred             hhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcc-hHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            3467778888885            8889999999999999999999986532 222321  12233322          


Q ss_pred             -------------------------------------CCCCcccc--ccccCCcCccCccccccCCCCcce---------
Q 048710          106 -------------------------------------LADQTYMT--TQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 -------------------------------------~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                                           ..+.....  ...+||..|.+||.+.....+..+         
T Consensus       198 RDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil  277 (604)
T KOG0592|consen  198 RDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL  277 (604)
T ss_pred             ccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHH
Confidence                                                 11112222  568899999999999999888888         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       .|+.|..||.+.    +.++   +.+.+..=      |=    ++++..+....+|...-+..| ++|++.
T Consensus       278 yQmlaG~PPFra~----Neyl---iFqkI~~l------~y----~fp~~fp~~a~dLv~KLLv~dp~~Rlt~  332 (604)
T KOG0592|consen  278 YQMLAGQPPFRAA----NEYL---IFQKIQAL------DY----EFPEGFPEDARDLIKKLLVRDPSDRLTS  332 (604)
T ss_pred             HHHhcCCCCCccc----cHHH---HHHHHHHh------cc----cCCCCCCHHHHHHHHHHHccCccccccH
Confidence             899999999843    2222   11222110      00    112222234445666888899 999874

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.76  E-value=5.1e-08  Score=73.13  Aligned_cols=148  Identities=18%  Similarity=0.244  Sum_probs=89.7

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ++...-++..+|+++-..|+           .+....|||+|+|+||+|..-|-...   ..+....-....||      
T Consensus        49 ~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~y  125 (355)
T KOG0033|consen   49 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILEALAY  125 (355)
T ss_pred             hccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence            44556678899999999988           77888999999999999987654321   12222222222222      


Q ss_pred             ------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                          ..+.........||++|||||+....+++..+          =+
T Consensus       126 CH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiL  205 (355)
T KOG0033|consen  126 CHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL  205 (355)
T ss_pred             HHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHH
Confidence                                                11122233466799999999999988888777          46


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +.|..||...   .    .+-+.+.+..+...  +++.-.... .+.+..   |..+.+..+ .+|-|
T Consensus       206 L~G~~PF~~~---~----~~rlye~I~~g~yd--~~~~~w~~i-s~~Ak~---LvrrML~~dP~kRIt  260 (355)
T KOG0033|consen  206 LVGYPPFWDE---D----QHRLYEQIKAGAYD--YPSPEWDTV-TPEAKS---LIRRMLTVNPKKRIT  260 (355)
T ss_pred             HhCCCCCCCc---c----HHHHHHHHhccccC--CCCcccCcC-CHHHHH---HHHHHhccChhhhcc
Confidence            7799999832   1    11233333344220  111111111 244444   444788888 88865

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.75  E-value=7.3e-08  Score=77.47  Aligned_cols=96  Identities=14%  Similarity=0.121  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCC------CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------LET------EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~------~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.+|+.++.+++           ...      ...++|+||+ +++|.+++...    .+++.....++.++     
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~  132 (343)
T cd07851          58 AKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLK  132 (343)
T ss_pred             HHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHH
Confidence            456778999998887           222      2489999998 67999999753    58888887777766     


Q ss_pred             -------------------CCCC-------------ccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------LADQ-------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                         ..+.             ........+|..|+|||...+ ..++.++          |++||
T Consensus       133 ~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg  212 (343)
T cd07851         133 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  212 (343)
T ss_pred             HHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC
Confidence                               0000             001123457889999999865 3456666          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       213 ~~pf~~  218 (343)
T cd07851         213 KTLFPG  218 (343)
T ss_pred             CCCCCC
Confidence            999863

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.73  E-value=7.4e-08  Score=75.96  Aligned_cols=97  Identities=12%  Similarity=0.111  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHhhcc------------c-------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN------------L-------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~-------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|++++.+++            .       .....++|+||+. ++|.+.+.....  .+++.....++.++    
T Consensus        52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al  128 (311)
T cd07866          52 ITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPSV--KLTESQIKCYMLQLLEGI  128 (311)
T ss_pred             hhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhcccc--CCCHHHHHHHHHHHHHHH
Confidence            46788999999887            1       1235799999987 467777765433  58888888877777    


Q ss_pred             --------------------CC-------C--------------------CccccccccCCcCccCcccccc-CCCCcce
Q 048710          106 --------------------LA-------D--------------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS  137 (208)
Q Consensus       106 --------------------~~-------~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks  137 (208)
                                          ..       +                    .....+...|+..|+|||.+.+ ..++.++
T Consensus       129 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  208 (311)
T cd07866         129 NYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV  208 (311)
T ss_pred             HHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchh
Confidence                                00       0                    0001123356788999998765 3466666


Q ss_pred             ----------eEecCCCCCCC
Q 048710          138 ----------NLLTKEKPICL  148 (208)
Q Consensus       138 ----------E~~tg~~p~~~  148 (208)
                                |++||+.|+..
T Consensus       209 Dv~slG~il~el~~g~~~~~~  229 (311)
T cd07866         209 DIWGIGCVFAEMFTRRPILQG  229 (311)
T ss_pred             HhHHHHHHHHHHHhCCCCCCC
Confidence                      99999999874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.72  E-value=9.8e-08  Score=75.70  Aligned_cols=99  Identities=14%  Similarity=0.214  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC------CCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN------EEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~------~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++             ......++|+||+. ++|.+++....      ....+++.....++.++    
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  121 (317)
T cd07868          43 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  121 (317)
T ss_pred             HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHH
Confidence            46789999999998             23456889999986 58888875321      11246777766666666    


Q ss_pred             -------------------C--C-CC---------------------ccccccccCCcCccCcccccc-CCCCcce----
Q 048710          106 -------------------L--A-DQ---------------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----  137 (208)
Q Consensus       106 -------------------~--~-~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----  137 (208)
                                         .  . +.                     ........||+.|+|||++.+ ..++.++    
T Consensus       122 ~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws  201 (317)
T cd07868         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA  201 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHH
Confidence                               0  0 00                     001123567899999999876 4567666    


Q ss_pred             ------eEecCCCCCCC
Q 048710          138 ------NLLTKEKPICL  148 (208)
Q Consensus       138 ------E~~tg~~p~~~  148 (208)
                            |++||+.||..
T Consensus       202 lG~il~el~~g~~~f~~  218 (317)
T cd07868         202 IGCIFAELLTSEPIFHC  218 (317)
T ss_pred             HHHHHHHHHhCCCCccC
Confidence                  99999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.70  E-value=2.1e-07  Score=78.33  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=34.7

Q ss_pred             cccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCC
Q 048710          113 TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEEN  154 (208)
Q Consensus       113 ~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~  154 (208)
                      ....+||.-|+|||++....++.-.          ||+-|+.||....+.+.
T Consensus       828 ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t  879 (1034)
T KOG0608|consen  828 AHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET  879 (1034)
T ss_pred             hhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence            3467899999999999988888877          99999999986555443

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.69  E-value=2.2e-07  Score=74.77  Aligned_cols=96  Identities=14%  Similarity=0.110  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cC------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------LE------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.+|+.++.+++           ..      ....++|+||+ +++|.+++...    .+++.....++.++     
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~  132 (343)
T cd07880          58 AKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLK  132 (343)
T ss_pred             HHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHH
Confidence            356889999999987           11      12468999998 78999888753    47888887777766     


Q ss_pred             -------------------CCCC-------------ccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------LADQ-------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                         ..+.             ........++..|++||.+.+ ..++.++          |+++|
T Consensus       133 ~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g  212 (343)
T cd07880         133 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG  212 (343)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                               0000             001122456889999998865 3466666          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      ..||..
T Consensus       213 ~~pf~~  218 (343)
T cd07880         213 KPLFKG  218 (343)
T ss_pred             CCCCCC
Confidence            999874

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.64  E-value=1.1e-07  Score=75.10  Aligned_cols=101  Identities=17%  Similarity=0.220  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCC--CeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC-------
Q 048710           48 VNKLINEVVILSQIN-----------LET--EVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~--~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i-------  105 (208)
                      ...+.+|+.++.+++           .+.  +..++|+||+++ +|.+++.....  ...++......++.++       
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  124 (316)
T cd07842          46 SQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL  124 (316)
T ss_pred             cHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH
Confidence            356788999999887           333  789999999985 67777653321  1146666666666555       


Q ss_pred             -----------------CC----CC-------------------ccccccccCCcCccCcccccc-CCCCcce-------
Q 048710          106 -----------------LA----DQ-------------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS-------  137 (208)
Q Consensus       106 -----------------~~----~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks-------  137 (208)
                                       ..    ..                   ........+|..|+|||.+.+ ..++.++       
T Consensus       125 H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  204 (316)
T cd07842         125 HSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC  204 (316)
T ss_pred             HhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence                             11    00                   000112346788999998765 3466666       


Q ss_pred             ---eEecCCCCCCCC
Q 048710          138 ---NLLTKEKPICLT  149 (208)
Q Consensus       138 ---E~~tg~~p~~~~  149 (208)
                         |++||..|+...
T Consensus       205 ~l~~l~~~~~~~~~~  219 (316)
T cd07842         205 IFAELLTLEPIFKGR  219 (316)
T ss_pred             HHHHHHhcCCCCcCC
Confidence               999999998744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=5.2e-08  Score=75.86  Aligned_cols=103  Identities=15%  Similarity=0.215  Sum_probs=74.0

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHH-H---HHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEM-Q---LHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~-r---~~i~~~i---  105 (208)
                      .+...-.-+.|-++|...+           ...+.+|+||||..||.|.-+|.+.+.   ++..+ |   ..|+..+   
T Consensus       208 akdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~---FsE~RtRFYGaEIvsAL~YL  284 (516)
T KOG0690|consen  208 AKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERV---FSEDRTRFYGAEIVSALGYL  284 (516)
T ss_pred             ehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhc---ccchhhhhhhHHHHHHhhhh
Confidence            3444445677778888777           788999999999999999999987542   33221 1   1222222   


Q ss_pred             ---------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ---------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                                       .......+.+.+||+-|+|||++....|+...          ||++|
T Consensus       285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCG  364 (516)
T KOG0690|consen  285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCG  364 (516)
T ss_pred             hhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhc
Confidence                                             11122234678899999999999999999887          99999


Q ss_pred             CCCCCCC
Q 048710          143 EKPICLT  149 (208)
Q Consensus       143 ~~p~~~~  149 (208)
                      +.||...
T Consensus       365 RLPFyn~  371 (516)
T KOG0690|consen  365 RLPFYNK  371 (516)
T ss_pred             cCccccc
Confidence            9999843

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.61  E-value=3.6e-07  Score=73.43  Aligned_cols=95  Identities=14%  Similarity=0.144  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.+|+.++.+++                 ......++|+||+. ++|.+++..     .+++.....++.++     
T Consensus        58 ~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~  131 (342)
T cd07879          58 AKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMGH-----PLSEDKVQYLVYQMLCGLK  131 (342)
T ss_pred             hhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHcC-----CCCHHHHHHHHHHHHHHHH
Confidence            356889999999887                 11235699999997 477776532     47777777666666     


Q ss_pred             -------------------CCC-------------CccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------LAD-------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                         ..+             .........||..|+|||.+.+ ..++.++          |+++|
T Consensus       132 ~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         132 YIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence                               000             0001123456788999999865 4566666          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       212 ~~pf~~  217 (342)
T cd07879         212 KTLFKG  217 (342)
T ss_pred             CCCCCC
Confidence            999974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.60  E-value=3.6e-07  Score=75.28  Aligned_cols=145  Identities=14%  Similarity=0.162  Sum_probs=96.2

Q ss_pred             cchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           43 IYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        43 ~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ++...--.+..|++.|.-+.           ..-..+|||+|.=++|+|++||.++..+  +.....-+...+|      
T Consensus        56 lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~Y  133 (864)
T KOG4717|consen   56 LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISY  133 (864)
T ss_pred             cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHH
Confidence            34444456788998888776           6677899999999999999999876653  5554444444444      


Q ss_pred             ----------------------------CCC------CccccccccCCcCccCccccccCCCCcce-----------eEe
Q 048710          106 ----------------------------LAD------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----------NLL  140 (208)
Q Consensus       106 ----------------------------~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----------E~~  140 (208)
                                                  .-+      .....++-+|++.|-|||++.|..|+..+           =++
T Consensus       134 CHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLV  213 (864)
T KOG4717|consen  134 CHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLV  213 (864)
T ss_pred             HhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHH
Confidence                                        001      11123467899999999999999998776           466


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +|+.||+....-               ..+..++|-..  ..|.....++..|+...+..| .+|-+
T Consensus       214 CGq~PFqeANDS---------------ETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAs  263 (864)
T KOG4717|consen  214 CGQPPFQEANDS---------------ETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRAS  263 (864)
T ss_pred             hCCCccccccch---------------hhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhcc
Confidence            799999854211               12233344433  334444555566777888888 88765

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.59  E-value=4.7e-07  Score=72.77  Aligned_cols=97  Identities=14%  Similarity=0.178  Sum_probs=66.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cC--------------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN-----------LE--------------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~--------------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i  101 (208)
                      ..+.+.+|++++.+++           ..              ....++|+||++ ++|.+++...    .+++.....+
T Consensus        45 ~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~  119 (342)
T cd07854          45 SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLF  119 (342)
T ss_pred             hHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHH
Confidence            3467889999999888           11              135789999997 6999988643    4677777666


Q ss_pred             HHhC------------------------C-CCCcc-------------------ccccccCCcCccCcccccc-CCCCcc
Q 048710          102 VVDS------------------------L-ADQTY-------------------MTTQVQGTFGYLDLQYFQS-SPFTEK  136 (208)
Q Consensus       102 ~~~i------------------------~-~~~~~-------------------~~~~~~gt~~y~aPE~~~~-~~~~~k  136 (208)
                      +.++                        . .+...                   ......|+..|+|||.+.+ ..++.+
T Consensus       120 ~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  199 (342)
T cd07854         120 MYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKA  199 (342)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCch
Confidence            6666                        0 00000                   0012346788999998654 456666


Q ss_pred             e----------eEecCCCCCCC
Q 048710          137 S----------NLLTKEKPICL  148 (208)
Q Consensus       137 s----------E~~tg~~p~~~  148 (208)
                      +          |+++|+.||..
T Consensus       200 ~DiwSlGvil~el~~g~~pf~~  221 (342)
T cd07854         200 IDMWAAGCIFAEMLTGKPLFAG  221 (342)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCC
Confidence            6          99999999964

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.58  E-value=1.6e-07  Score=70.40  Aligned_cols=147  Identities=14%  Similarity=0.182  Sum_probs=95.9

Q ss_pred             hHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+...+|++.-++++                ......||++.|...|||.+.+...+ +...++..+.+.|+.|+    
T Consensus        61 ~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL  140 (302)
T KOG2345|consen   61 DIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGL  140 (302)
T ss_pred             HHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHH
Confidence            3455677777777666                45667999999999999999997643 33368999999999998    


Q ss_pred             -------------------------------CCCC----------ccc------cccccCCcCccCccccc---cCCCCc
Q 048710          106 -------------------------------LADQ----------TYM------TTQVQGTFGYLDLQYFQ---SSPFTE  135 (208)
Q Consensus       106 -------------------------------~~~~----------~~~------~~~~~gt~~y~aPE~~~---~~~~~~  135 (208)
                                                     +.++          ...      -....-|+.|-|||.+.   +...++
T Consensus       141 ~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~e  220 (302)
T KOG2345|consen  141 EALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITE  220 (302)
T ss_pred             HHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccc
Confidence                                           0000          000      01122378999999986   345556


Q ss_pred             ce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcc-cccccccccccCcHHHHHHHHHHHHHhhcCC-CC
Q 048710          136 KS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRL-FEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EK  203 (208)
Q Consensus       136 ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~  203 (208)
                      ++          +++-|..||+..              ....|.+ ..+..+.+..+.+....+.+.++..+|++.| .+
T Consensus       221 rtDIWSLGCtLYa~mf~~sPfe~~--------------~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~q  286 (302)
T KOG2345|consen  221 RTDIWSLGCTLYAMMFGESPFERI--------------YQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQ  286 (302)
T ss_pred             ccchhhhhHHHHHHHHcCCcchHH--------------hhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCccc
Confidence            66          677788888721              1112222 1223333322222235667888999999999 99


Q ss_pred             CCCC
Q 048710          204 KPTM  207 (208)
Q Consensus       204 RPsm  207 (208)
                      ||+.
T Consensus       287 RP~i  290 (302)
T KOG2345|consen  287 RPTI  290 (302)
T ss_pred             CCCH
Confidence            9985

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=2.7e-07  Score=74.97  Aligned_cols=149  Identities=15%  Similarity=0.165  Sum_probs=94.6

Q ss_pred             HHHHHHHhhcc------------cCCC-eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           52 INEVVILSQIN------------LETE-VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        52 ~~E~~~l~~l~------------~~~~-~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      ++|++.|.+++            .+++ .+|+|||||+ .+|++.+++.+.  .++....-.|+.||             
T Consensus        56 LREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r--~fse~~irnim~QilqGL~hiHk~GfF  132 (538)
T KOG0661|consen   56 LREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNR--LFSESDIRNIMYQILQGLAHIHKHGFF  132 (538)
T ss_pred             HHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCC--cCCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            78999999988            4444 9999999997 899999987633  68888887777777             


Q ss_pred             --------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCCC
Q 048710          106 --------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 --------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~  148 (208)
                                                ........+..+.|-.|-|||++.+ +-|+.+.          |+.+-+.-|-.
T Consensus       133 HRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG  212 (538)
T KOG0661|consen  133 HRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG  212 (538)
T ss_pred             cccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC
Confidence                                      1112223456778999999999875 5566555          77766654432


Q ss_pred             CCccCCccHHHHHHHHHhcC-----------------cccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKED-----------------RLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~-----------------~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .   .+.+-+.-+.+.+...                 .++.+..-.|..-.+ ....+.++++.+|++=| ++|||-
T Consensus       213 ~---sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA  285 (538)
T KOG0661|consen  213 A---SEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTA  285 (538)
T ss_pred             C---cHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccH
Confidence            1   1111111122222111                 122222222211112 36677888999999999 999984

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.58  E-value=6.2e-08  Score=77.50  Aligned_cols=97  Identities=18%  Similarity=0.164  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           48 VNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      .+.+.+|+.++.+++                ......|+++||+. ++|.+++....   .+++.....++.++      
T Consensus        45 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~  120 (332)
T cd07857          45 AKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKY  120 (332)
T ss_pred             HHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHH
Confidence            456888999998874                11234678888886 79999997543   57888888777777      


Q ss_pred             ------------------CC-------C--C-----------ccccccccCCcCccCcccccc-CCCCcce---------
Q 048710          106 ------------------LA-------D--Q-----------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS---------  137 (208)
Q Consensus       106 ------------------~~-------~--~-----------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks---------  137 (208)
                                        ..       +  .           ........||..|+|||...+ ..++.++         
T Consensus       121 LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l  200 (332)
T cd07857         121 IHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL  200 (332)
T ss_pred             HHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence                              00       0  0           000123468899999998765 4566666         


Q ss_pred             -eEecCCCCCCC
Q 048710          138 -NLLTKEKPICL  148 (208)
Q Consensus       138 -E~~tg~~p~~~  148 (208)
                       |+++|+.|+..
T Consensus       201 ~~l~~g~~pf~~  212 (332)
T cd07857         201 AELLGRKPVFKG  212 (332)
T ss_pred             HHHHhCCcCCCC
Confidence             89999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.55  E-value=8.9e-07  Score=71.27  Aligned_cols=96  Identities=14%  Similarity=0.117  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.+|+.++.+++                 ...+..+++++++ +++|.+++...    .+++.....++.++     
T Consensus        60 ~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~  134 (345)
T cd07877          60 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLK  134 (345)
T ss_pred             HHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHH
Confidence            356888999999888                 1124467888876 78999888643    47888887777766     


Q ss_pred             -------------------CCC-------------CccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------LAD-------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                         ..+             .........||..|+|||...+ ..++.++          |++||
T Consensus       135 ~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g  214 (345)
T cd07877         135 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG  214 (345)
T ss_pred             HHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhC
Confidence                               000             0011123457889999998865 4566666          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.|+..
T Consensus       215 ~~pf~~  220 (345)
T cd07877         215 RTLFPG  220 (345)
T ss_pred             CCCCCC
Confidence            999863

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.51  E-value=8.9e-07  Score=74.91  Aligned_cols=98  Identities=11%  Similarity=0.103  Sum_probs=65.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|+.+|.+++           ...+..|+|+|++. ++|.+++.....  .......+...++.++        
T Consensus       206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH  284 (501)
T PHA03210        206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH  284 (501)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999988           56678899999985 678888765321  0012233334455554        


Q ss_pred             -------------------------CCC--------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 -------------------------LAD--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------------~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                               +-+        .........||..|+|||++.+..++.++          |+++|
T Consensus       285 ~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~  364 (501)
T PHA03210        285 DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH  364 (501)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence                                     000        01111235699999999999998888888          99998


Q ss_pred             CCC
Q 048710          143 EKP  145 (208)
Q Consensus       143 ~~p  145 (208)
                      ..+
T Consensus       365 ~~~  367 (501)
T PHA03210        365 DFC  367 (501)
T ss_pred             CCC
Confidence            653

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.48  E-value=5.7e-07  Score=70.46  Aligned_cols=103  Identities=14%  Similarity=0.271  Sum_probs=70.7

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHH-HHH---HHHHhC---------------------------------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWE-MQL---HIVVDS---------------------------------  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~-~r~---~i~~~i---------------------------------  105 (208)
                      .....+++|.||+++|+|--+++..++   ++.. .|.   .|++.+                                 
T Consensus       321 qtesrlffvieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygm  397 (593)
T KOG0695|consen  321 QTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGM  397 (593)
T ss_pred             cccceEEEEEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccch
Confidence            677889999999999999988887654   4333 221   222221                                 


Q ss_pred             ---CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCcc-CCccHHHHHHHHHhcC
Q 048710          106 ---LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYE-ENKSLTTYFLRAMKED  168 (208)
Q Consensus       106 ---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~-~~~~l~~~~~~~~~~~  168 (208)
                         .....-.+++.+||+-|+|||.+.+..|+...          ||+.|+.||+....+ ...+.-+++.+.+.+.
T Consensus       398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek  474 (593)
T KOG0695|consen  398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK  474 (593)
T ss_pred             hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh
Confidence               11122234578899999999999999999877          999999999864322 2334556666665544

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.47  E-value=6.8e-07  Score=72.76  Aligned_cols=142  Identities=17%  Similarity=0.187  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           48 VNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .+...+|+.+|.+++             .+.+.+|||+|||+.|.+...--++-   .++..+.-+++.++         
T Consensus       152 ~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~  228 (576)
T KOG0585|consen  152 IEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVLGLEYLHY  228 (576)
T ss_pred             HHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHHHHHHHHh
Confidence            357889999999998             66788999999999998764433221   26666666666655         


Q ss_pred             ----------------------------------C--CCCccccccccCCcCccCccccccCC---CCcce---------
Q 048710          106 ----------------------------------L--ADQTYMTTQVQGTFGYLDLQYFQSSP---FTEKS---------  137 (208)
Q Consensus       106 ----------------------------------~--~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ks---------  137 (208)
                                                        .  .+........+||+.|||||...++.   +.-++         
T Consensus       229 QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT  308 (576)
T KOG0585|consen  229 QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT  308 (576)
T ss_pred             cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence                                              0  01111123578999999999998733   33232         


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        -++-|+.||....      ..+ ....+.+        ..|.-...++.-+.+-+|....+..| .+|-+.
T Consensus       309 LYCllfG~~PF~~~~------~~~-l~~KIvn--------~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l  366 (576)
T KOG0585|consen  309 LYCLLFGQLPFFDDF------ELE-LFDKIVN--------DPLEFPENPEINEDLKDLIKRLLEKDPEQRITL  366 (576)
T ss_pred             HHHhhhccCCcccch------HHH-HHHHHhc--------CcccCCCcccccHHHHHHHHHHhhcChhheeeh
Confidence              5666888887321      111 1111211        11211111234455667777888899 888654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.40  E-value=1.7e-07  Score=83.52  Aligned_cols=40  Identities=13%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+++++||+ +++|.++|.....  .+++.+...++.+|
T Consensus        50 ~~~~~~~~~~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi   89 (793)
T PLN00181         50 LDDDSIVRALECE-DVSLRQWLDNPDR--SVDAFECFHVFRQI   89 (793)
T ss_pred             cccchhhhhhccC-CccHHHHHhcccc--cccHHHHHHHHHHH
Confidence            3445678889987 5799999986433  58888888888877

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.39  E-value=1.7e-06  Score=72.16  Aligned_cols=101  Identities=24%  Similarity=0.309  Sum_probs=69.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHH---HHHHhC------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQL---HIVVDS------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~---~i~~~i------  105 (208)
                      ...+.+.+|+++|..++           .....+|+||||+.+|.++++|.+++.-+.  ...|.   ++...+      
T Consensus        97 ~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e--~~ar~~F~q~vsaveYcH~k  174 (596)
T KOG0586|consen   97 SKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKE--KEARAKFRQIVSAVEYCHSK  174 (596)
T ss_pred             HHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchh--hhhhhhhHHHHHHHHHHhhc
Confidence            34466899999999998           668899999999999999999987653211  11111   111111      


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCCCcce-----------eEecCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----------E~~tg~~p  145 (208)
                                                   ..+......+.+|++.|.|||.+++..++..-           -++.|.-|
T Consensus       175 ~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  175 NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             ceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccc
Confidence                                         01112223467899999999999987776433           56668888


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |+.
T Consensus       255 FDG  257 (596)
T KOG0586|consen  255 FDG  257 (596)
T ss_pred             cCC
Confidence            873

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.35  E-value=5.9e-06  Score=64.00  Aligned_cols=153  Identities=14%  Similarity=0.149  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHH----HHHHhC-------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQL----HIVVDS-------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~----~i~~~i-------  105 (208)
                      .+-.++|+++|.+++           .....++||+|||+.--|.+.=+.+.+   ++....-    +++.+|       
T Consensus        45 kKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G---~~~~~vk~~l~Q~l~ai~~cHk~n  121 (396)
T KOG0593|consen   45 KKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNG---VPSELVKKYLYQLLKAIHFCHKNN  121 (396)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCC---CCHHHHHHHHHHHHHHhhhhhhcC
Confidence            345789999999999           778889999999998877776555443   4444333    344444       


Q ss_pred             -----------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                                   ........+..+.|-.|-|||.+.+ ..|+...          |++||..-
T Consensus       122 ~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL  201 (396)
T KOG0593|consen  122 CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPL  201 (396)
T ss_pred             eecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcC
Confidence                                         1112222345667899999999987 5566555          99999866


Q ss_pred             CCCCCccCCccHHHHHHHHH-----------hcC-cccccccccccccCc-----HHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAM-----------KED-RLFEIFDGLVLKEGG-----KDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~-----------~~~-~~~~~~d~~l~~~~~-----~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +-..   ...+..-.+...+           ... -+.-+-=|......+     +....-+++++..|++.| ++|++
T Consensus       202 ~PG~---SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s  277 (396)
T KOG0593|consen  202 WPGR---SDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS  277 (396)
T ss_pred             CCCc---chHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc
Confidence            5532   2222211122111           111 011111111111111     133346778999999999 99987

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.28  E-value=2e-06  Score=67.61  Aligned_cols=83  Identities=16%  Similarity=0.147  Sum_probs=51.3

Q ss_pred             ccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHH
Q 048710          116 VQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKD  185 (208)
Q Consensus       116 ~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~  185 (208)
                      ..||+.|+|||...+..++.++          |++||+.||.......  .+..........    .+..+.+..   ..
T Consensus       193 ~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~---~~  263 (294)
T PHA02882        193 HRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAAKCDFIK----RLHEGKIKI---KN  263 (294)
T ss_pred             cCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHhHHHHHH----Hhhhhhhcc---CC
Confidence            4689999999999988888888          9999999997432111  111111111100    011111110   11


Q ss_pred             HHHHHHHHHHHhhcCC-CCCCCC
Q 048710          186 EIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       186 ~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....+.+++..||+.+ ++||++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~rp~~  286 (294)
T PHA02882        264 ANKFIYDFIECVTKLSYEEKPDY  286 (294)
T ss_pred             CCHHHHHHHHHHHhCCCCCCCCH
Confidence            2345667777999999 999986

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=3e-06  Score=69.81  Aligned_cols=99  Identities=12%  Similarity=0.186  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHH--hC----------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVV--DS----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~--~i----------  105 (208)
                      +...+|-.+|.+++           .+....|+.||-|-||.|-..|++.+..  -+...|.-++.  +.          
T Consensus       465 eHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~F--dd~tarF~~acv~EAfeYLH~k~iI  542 (732)
T KOG0614|consen  465 EHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSF--DDYTARFYVACVLEAFEYLHRKGII  542 (732)
T ss_pred             HHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCc--ccchhhhhHHHHHHHHHHHHhcCce
Confidence            45677888888877           6777899999999999999999876532  11222222222  11          


Q ss_pred             --------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 --------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 --------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                                .......+.+.+||+-|.|||++..+..+...          |++||..||...
T Consensus       543 YRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~  622 (732)
T KOG0614|consen  543 YRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV  622 (732)
T ss_pred             eccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence                                      22334455688999999999999887777666          999999999854

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.22  E-value=5.7e-06  Score=67.88  Aligned_cols=102  Identities=13%  Similarity=0.115  Sum_probs=75.5

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cC--CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LE--TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~--~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .+.......+|+.||++|+           .+  ...+|||+|||+ -+|.-++.+..-  .++..+.-.++.|+     
T Consensus       156 ~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd-hDL~GLl~~p~v--kft~~qIKc~mkQLl~Gl~  232 (560)
T KOG0600|consen  156 KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD-HDLSGLLSSPGV--KFTEPQIKCYMKQLLEGLE  232 (560)
T ss_pred             CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc-chhhhhhcCCCc--ccChHHHHHHHHHHHHHHH
Confidence            3444566789999999999           22  478999999998 577778876543  57888777677666     


Q ss_pred             ------------------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------e
Q 048710          106 ------------------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------N  138 (208)
Q Consensus       106 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E  138 (208)
                                                          ........+..+-|..|-+||.+.| ..|+...          |
T Consensus       233 ~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~E  312 (560)
T KOG0600|consen  233 YCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAE  312 (560)
T ss_pred             HHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHH
Confidence                                                1122223455566999999999987 5677766          9


Q ss_pred             EecCCCCCCC
Q 048710          139 LLTKEKPICL  148 (208)
Q Consensus       139 ~~tg~~p~~~  148 (208)
                      +++|+..+..
T Consensus       313 l~~gkPI~~G  322 (560)
T KOG0600|consen  313 LFLGKPILQG  322 (560)
T ss_pred             HHcCCCCcCC
Confidence            9999988774

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.21  E-value=6.3e-06  Score=68.35  Aligned_cols=104  Identities=18%  Similarity=0.260  Sum_probs=71.2

Q ss_pred             ccchhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           42 LIYEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        42 ~~~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .+...+..++.+|+.||.+++           ..++..|.|||=+. |++-+.|-..++. .|+...---++.+|     
T Consensus       601 rFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GDMLEMILSsEkg-RL~er~TkFlvtQIL~ALr  678 (888)
T KOG4236|consen  601 RFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKG-RLPERITKFLVTQILVALR  678 (888)
T ss_pred             cCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-chHHHHHHHhhcc-cchHHHHHHHHHHHHHHHH
Confidence            344555678999999999999           78889999999986 5555555443333 24433222222333     


Q ss_pred             -------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 -------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                           ..+.......++||+.|+|||+++.+.|+..-          -
T Consensus       679 ~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYV  758 (888)
T KOG4236|consen  679 YLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYV  758 (888)
T ss_pred             HhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEE
Confidence                                                 22334445678999999999999988887654          4


Q ss_pred             EecCCCCCC
Q 048710          139 LLTKEKPIC  147 (208)
Q Consensus       139 ~~tg~~p~~  147 (208)
                      -++|.-||+
T Consensus       759 sLSGTFPFN  767 (888)
T KOG4236|consen  759 SLSGTFPFN  767 (888)
T ss_pred             EecccccCC
Confidence            567888987

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.21  E-value=1e-05  Score=70.01  Aligned_cols=137  Identities=15%  Similarity=0.167  Sum_probs=87.0

Q ss_pred             HHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCC-C----CCCCCHHHHHHHHHhC---------
Q 048710           52 INEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQN-E----EFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        52 ~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~----~~~l~~~~r~~i~~~i---------  105 (208)
                      .+|+..|..-+            .+..+.||..|.|. .||.+++..+. .    ....+|...-+++.|+         
T Consensus       550 ~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iV  628 (903)
T KOG1027|consen  550 QREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIV  628 (903)
T ss_pred             HHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccc
Confidence            58888888766            78889999999996 99999998741 1    1123466667788877         


Q ss_pred             ---------------------------------CCC--CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ---------------------------------LAD--QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------------------------~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                       ..+  .........||.||+|||.++...-+...          -++
T Consensus       629 HRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvl  708 (903)
T KOG1027|consen  629 HRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVL  708 (903)
T ss_pred             cccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEe
Confidence                                             111  11124567899999999999876555544          566


Q ss_pred             c-CCCCCCCCCccCCccHHHHHHHHHhcC--cccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 T-KEKPICLTTYEENKSLTTYFLRAMKED--RLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 t-g~~p~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      | |..||......+.+         +..+  .+..+       ....++  ...+|+-+.++.+ ..||+.
T Consensus       709 tgG~HpFGd~~~R~~N---------Il~~~~~L~~L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa  761 (903)
T KOG1027|consen  709 TGGSHPFGDSLERQAN---------ILTGNYTLVHL-------EPLPDC--EAKDLISRMLNPDPQLRPSA  761 (903)
T ss_pred             cCCccCCCchHHhhhh---------hhcCccceeee-------ccCchH--HHHHHHHHhcCCCcccCCCH
Confidence            7 59999853211111         1111  11110       111111  4456666999999 999984

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=1.4e-05  Score=65.14  Aligned_cols=40  Identities=15%  Similarity=0.285  Sum_probs=32.8

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+++.+|-|+|||+|-+|+-+|..++   ..+....-.|+.+|
T Consensus       538 lDtdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQi  577 (775)
T KOG1151|consen  538 LDTDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQI  577 (775)
T ss_pred             eccccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHH
Confidence            88999999999999999999998765   45666666666666

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.12  E-value=3.8e-06  Score=70.54  Aligned_cols=124  Identities=11%  Similarity=0.110  Sum_probs=80.7

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------------CCC------Ccc--------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------------LAD------QTY--------  111 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------------~~~------~~~--------  111 (208)
                      .+..+.|+|||++.+|-+-+.+.....   +. ..+..|+.++                 .++      ...        
T Consensus       386 ~~~~~~~~v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG  461 (612)
T KOG0603|consen  386 EDGKEIYLVMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFG  461 (612)
T ss_pred             cCCceeeeeehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEec
Confidence            677789999999999999999886542   22 4555555555                 000      000        


Q ss_pred             -------ccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccc
Q 048710          112 -------MTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIF  174 (208)
Q Consensus       112 -------~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  174 (208)
                             ....-+-|..|.|||+.....+++.+          ||+||+.|+...+.+      ..+...+..+...   
T Consensus       462 ~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~s---  532 (612)
T KOG0603|consen  462 FWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKFS---  532 (612)
T ss_pred             hhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCccc---
Confidence                   00012347899999999999999999          999999999854332      2233333333322   


Q ss_pred             cccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          175 DGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       175 d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                               .......-+|..+|++.+ .+||+|+
T Consensus       533 ---------~~vS~~AKdLl~~LL~~dP~~Rl~~~  558 (612)
T KOG0603|consen  533 ---------ECVSDEAKDLLQQLLQVDPALRLGAD  558 (612)
T ss_pred             ---------cccCHHHHHHHHHhccCChhhCcChh
Confidence                     111223345666999999 9999984

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.11  E-value=6.7e-06  Score=68.34  Aligned_cols=138  Identities=15%  Similarity=0.262  Sum_probs=85.1

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------------------------------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------------------------------  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------------------------------  105 (208)
                      .+.+..+.|.+||+.|+|.+.+.+..-  .++|.-...+..++                                     
T Consensus        17 ~~~~~~~~i~~~c~rGsl~D~i~~~~~--~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~G   94 (484)
T KOG1023|consen   17 VDGPEMIVIWEYCSRGSLLDILSNEDI--KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFG   94 (484)
T ss_pred             ecCCceEEEEeeecCccHHhHHhcccc--CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhh
Confidence            455888999999999999999997433  68999888888777                                     


Q ss_pred             --CCCC----ccccccccCCcCccCccccccCCCC-------cce----------eEecCCCCCCCCCccCCccHHHHHH
Q 048710          106 --LADQ----TYMTTQVQGTFGYLDLQYFQSSPFT-------EKS----------NLLTKEKPICLTTYEENKSLTTYFL  162 (208)
Q Consensus       106 --~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~-------~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~  162 (208)
                        ....    ........-...|.|||.+......       .+.          |+++.+.||.........  .+.+.
T Consensus        95 l~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~--~eii~  172 (484)
T KOG1023|consen   95 LNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP--DEIIL  172 (484)
T ss_pred             hcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh--HHHHH
Confidence              0000    0001111234689999998764222       222          999999999853222211  22222


Q ss_pred             HHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          163 RAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       163 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      . +.+ .....+.|.+....  +....+..++.+||..+ .+||++.
T Consensus       173 ~-~~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~  215 (484)
T KOG1023|consen  173 R-VKK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIE  215 (484)
T ss_pred             H-HHh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHH
Confidence            2 222 12223344432111  33446888999999999 9999973

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.10  E-value=3.1e-05  Score=56.69  Aligned_cols=56  Identities=21%  Similarity=0.437  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...|.+|++.+..++           ...+..++++||+++++|.+++.....  .+++..+..++.++
T Consensus        35 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l  101 (215)
T cd00180          35 LEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEG--KLSEDEILRILLQI  101 (215)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHH
Confidence            467999999999888           455789999999999999999986531  47788877777776

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.07  E-value=1.7e-05  Score=59.19  Aligned_cols=100  Identities=20%  Similarity=0.312  Sum_probs=71.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|++.+.+++           ...+..++++||+++++|.+++.....  .+++.....++.++          
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~  117 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL  117 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4568899999999887           455789999999999999999986542  16677666666655          


Q ss_pred             --------------CC---------CCcc--------ccccccCCcCccCcccc-ccCCCCcce----------eEecCC
Q 048710          106 --------------LA---------DQTY--------MTTQVQGTFGYLDLQYF-QSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~~---------~~~~--------~~~~~~gt~~y~aPE~~-~~~~~~~ks----------E~~tg~  143 (208)
                                    ..         +...        ......++..|++||.. ....++.++          |+++|+
T Consensus       118 ~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~  197 (225)
T smart00221      118 GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGP  197 (225)
T ss_pred             CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCC
Confidence                          00         0000        11234577889999998 556666666          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||..
T Consensus       198 ~pf~~  202 (225)
T smart00221      198 EPFSG  202 (225)
T ss_pred             CCccc
Confidence            99863

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.06  E-value=3.6e-05  Score=59.70  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=63.5

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------------------------------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------------------------------  105 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------------------------------  105 (208)
                      .....+.+|||+|+||.|...+.+.+.. .++..+.-+|..+|                                     
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g~~-afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRGDQ-AFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence            5677889999999999999999987654 68888888888888                                     


Q ss_pred             -----CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 -----LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 -----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                           .........+-+-|+.|.|||++-..+|+...          =+++|-.||..
T Consensus       208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS  265 (400)
T KOG0604|consen  208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_pred             cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence                 00111222344568999999999777766444          57789999863

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.97  E-value=1.9e-05  Score=61.75  Aligned_cols=58  Identities=17%  Similarity=0.225  Sum_probs=46.3

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ........+|++++-+.+            .+.+.+|||||=|.||+|-++|++..   .++....-.+..+|
T Consensus       116 gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdi  185 (463)
T KOG0607|consen  116 GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDI  185 (463)
T ss_pred             chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHH
Confidence            334567889999998877            88899999999999999999998754   46666666666655

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.96  E-value=3.4e-05  Score=66.25  Aligned_cols=24  Identities=13%  Similarity=0.360  Sum_probs=21.0

Q ss_pred             CCCeEEEEEeeCCCCChhhHhhcC
Q 048710           64 ETEVLLLVYEFISNGTVYQYINNQ   87 (208)
Q Consensus        64 ~~~~~~lv~ey~~~GsL~~~l~~~   87 (208)
                      ..+..+||+||+++|+|.++++..
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            456799999999999999999754

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=97.91  E-value=5.1e-05  Score=57.97  Aligned_cols=152  Identities=13%  Similarity=0.133  Sum_probs=89.1

Q ss_pred             chhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhH---hhcCCCCCCCCHH------------
Q 048710           44 YEGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQY---INNQNEEFPIAWE------------   96 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~---l~~~~~~~~l~~~------------   96 (208)
                      .+...++|+.|.+...+-.            -+.+-.++-||.|+ -||+.+   ++.-.+. .++..            
T Consensus       102 ~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~-~ipE~Ilg~ItvatV~A  179 (361)
T KOG1006|consen  102 IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKS-RIPENILGHITVATVDA  179 (361)
T ss_pred             chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhc-cCcHhhhhheeeeehhH
Confidence            3455678999998887765            56677788999986 666554   2221110 12211            


Q ss_pred             -----HHHHHH-HhC----------------------CCCCccccccccCCcCccCcccccc--CCCCcce---------
Q 048710           97 -----MQLHIV-VDS----------------------LADQTYMTTQVQGTFGYLDLQYFQS--SPFTEKS---------  137 (208)
Q Consensus        97 -----~r~~i~-~~i----------------------~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ks---------  137 (208)
                           ..++|. .+|                      ....+..-+...|-..|||||-+..  ..|+.+|         
T Consensus       180 L~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL  259 (361)
T KOG1006|consen  180 LDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITL  259 (361)
T ss_pred             HHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceE
Confidence                 112211 111                      1112222345568889999998852  3477777         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |+.||.-||.     .+.+..+.+.+.. .|+.+.+..+    ....+....+......|+-.+ +.||..
T Consensus       260 ~EvAtG~fPyr-----~w~svfeql~~Vv-~gdpp~l~~~----~~~~~~s~~~~~fintCl~Kd~~~Rpky  321 (361)
T KOG1006|consen  260 YEVATGNFPYR-----KWDSVFEQLCQVV-IGDPPILLFD----KECVHYSFSMVRFINTCLIKDRSDRPKY  321 (361)
T ss_pred             eeeecCCCCcc-----hHHHHHHHHHHHH-cCCCCeecCc----ccccccCHHHHHHHHHHhhcccccCcch
Confidence             9999999987     3334555555544 2333222111    111334556777888999999 999974

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.87  E-value=0.00018  Score=57.43  Aligned_cols=100  Identities=14%  Similarity=0.172  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           48 VNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .+.-.-|+++|.++.                 .-.++.+||+|.+ |-|++++|.+++-. +++-.+.-.|+.|+     
T Consensus       129 reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~  206 (415)
T KOG0671|consen  129 REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVA  206 (415)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHH
Confidence            345688999999996                 5677888899987 35999999986533 56666666666666     


Q ss_pred             ------------------------------------------------CCCC----ccccccccCCcCccCccccccCCC
Q 048710          106 ------------------------------------------------LADQ----TYMTTQVQGTFGYLDLQYFQSSPF  133 (208)
Q Consensus       106 ------------------------------------------------~~~~----~~~~~~~~gt~~y~aPE~~~~~~~  133 (208)
                                                                      +-++    ....+.++.|-.|-|||++.+-..
T Consensus       207 fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGw  286 (415)
T KOG0671|consen  207 FLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGW  286 (415)
T ss_pred             HHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCc
Confidence                                                            0000    011245677999999999999888


Q ss_pred             Ccce----------eEecCCCCCCCC
Q 048710          134 TEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       134 ~~ks----------E~~tg~~p~~~~  149 (208)
                      +..+          |+.||..-|..-
T Consensus       287 S~pCDvWSiGCIL~ElytG~~LFqtH  312 (415)
T KOG0671|consen  287 SQPCDVWSIGCILVELYTGETLFQTH  312 (415)
T ss_pred             CCccCceeeeeEEEEeeccceecccC
Confidence            8887          999999988743

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=97.83  E-value=7.4e-05  Score=63.04  Aligned_cols=99  Identities=15%  Similarity=0.180  Sum_probs=73.8

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      -.++-..|+++|..++                 ...+++|||+|.++ -+|+++|+++.-. .++....-.|+.+|    
T Consensus       225 f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L  302 (586)
T KOG0667|consen  225 FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFR-GLSLPLVRKFAQQILTAL  302 (586)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHH
Confidence            3456789999999998                 77899999999986 8999999876432 57777666677766    


Q ss_pred             -------------------------------CCCCccccc----cccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -------------------------------LADQTYMTT----QVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------------------------~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                     +-+.++...    ...-+..|-|||++.|.+|+.+-          ||.
T Consensus       303 ~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~  382 (586)
T KOG0667|consen  303 LFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELF  382 (586)
T ss_pred             HHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHh
Confidence                                           111222111    33346789999999999999998          999


Q ss_pred             cCCCCCC
Q 048710          141 TKEKPIC  147 (208)
Q Consensus       141 tg~~p~~  147 (208)
                      ||..=|.
T Consensus       383 tG~PLfp  389 (586)
T KOG0667|consen  383 TGEPLFP  389 (586)
T ss_pred             cCccccC
Confidence            9965554

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.57  E-value=4e-05  Score=68.99  Aligned_cols=127  Identities=17%  Similarity=0.174  Sum_probs=78.2

Q ss_pred             CeEEEEEeeCCCCChhhHhhcCCC--CCCCCHHHHHHHHHhC--------------------------------------
Q 048710           66 EVLLLVYEFISNGTVYQYINNQNE--EFPIAWEMQLHIVVDS--------------------------------------  105 (208)
Q Consensus        66 ~~~~lv~ey~~~GsL~~~l~~~~~--~~~l~~~~r~~i~~~i--------------------------------------  105 (208)
                      -.+||=||||++-.|++.++.+.-  .....|..=-+|+.|+                                      
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~  748 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK  748 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence            568899999999999999987532  1234565555666666                                      


Q ss_pred             ----------------CCCCccccccccCCcCccCccccccC---CCCcce----------eEecCCCCCCCCCccCCcc
Q 048710          106 ----------------LADQTYMTTQVQGTFGYLDLQYFQSS---PFTEKS----------NLLTKEKPICLTTYEENKS  156 (208)
Q Consensus       106 ----------------~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~ks----------E~~tg~~p~~~~~~~~~~~  156 (208)
                                      ........++.+||.-|+|||.+.+.   .|+.|.          ||+-   ||...     +.
T Consensus       749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-----ME  820 (1351)
T KOG1035|consen  749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-----ME  820 (1351)
T ss_pred             hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch-----HH
Confidence                            11122344678899999999999864   488888          6653   44421     11


Q ss_pred             HHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          157 LTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       157 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       ...+...++.+.++.-  +.    ...+....-.+++.+.++.| ++|||-
T Consensus       821 -Ra~iL~~LR~g~iP~~--~~----f~~~~~~~e~slI~~Ll~hdP~kRPtA  865 (1351)
T KOG1035|consen  821 -RASILTNLRKGSIPEP--AD----FFDPEHPEEASLIRWLLSHDPSKRPTA  865 (1351)
T ss_pred             -HHHHHHhcccCCCCCC--cc----cccccchHHHHHHHHHhcCCCccCCCH
Confidence             1223334455555433  11    11122223345666889999 999983

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.51  E-value=4.5e-05  Score=63.03  Aligned_cols=73  Identities=16%  Similarity=0.222  Sum_probs=56.1

Q ss_pred             CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------------------------------C
Q 048710           65 TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------------------------------L  106 (208)
Q Consensus        65 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------------------------------~  106 (208)
                      ...+|+.|++|..++|.+||.+.......+|...+.+..++                                      .
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~  407 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD  407 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecc
Confidence            34688999999999999999865544456777666666666                                      1


Q ss_pred             CCC-----ccccccccCCcCccCccccccCCCCcce
Q 048710          107 ADQ-----TYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       107 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .+.     .+..+...||..||+||.+.+..|+.|+
T Consensus       408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kv  443 (516)
T KOG1033|consen  408 KDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKV  443 (516)
T ss_pred             cCCcccchhhhhhhcccccccCCHHHHhhhhhhhhc
Confidence            111     3345678899999999999999999998

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.45  E-value=9.4e-05  Score=64.90  Aligned_cols=79  Identities=16%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             cccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcH
Q 048710          115 QVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGK  184 (208)
Q Consensus       115 ~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~  184 (208)
                      ...||..|+|||++.+..++.++          |++||+.||....      ...++..... ....   .+..    ..
T Consensus       539 ~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~------~~~~~~~il~-~~~~---~p~~----~~  604 (669)
T cd05610         539 RILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET------PQQVFQNILN-RDIP---WPEG----EE  604 (669)
T ss_pred             ceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHh-cCCC---CCcc----cc
Confidence            45789999999999988888877          9999999987421      1222222221 1110   0110    11


Q ss_pred             HHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          185 DEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       185 ~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....+.++...||..+ .+||++
T Consensus       605 ~~~~~~~~~l~~lL~~dP~~R~ta  628 (669)
T cd05610         605 KLSVNAQNAIEILLTMDPTKRAGL  628 (669)
T ss_pred             cCCHHHHHHHHHHcccChhHCcCH
Confidence            22334566777999999 999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.42  E-value=0.00082  Score=59.09  Aligned_cols=55  Identities=18%  Similarity=0.230  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...|..|+.++..++           ...+..||||||+++|+|.++++...   .+++.....++.++
T Consensus        48 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qi  113 (669)
T cd05610          48 VHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEV  113 (669)
T ss_pred             HHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHH
Confidence            467889999998877           55678999999999999999997643   46777777776666

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.40  E-value=0.00063  Score=57.61  Aligned_cols=22  Identities=23%  Similarity=0.339  Sum_probs=19.7

Q ss_pred             CCeEEEEEeeCCCCChhhHhhc
Q 048710           65 TEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        65 ~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      .+..+|||||++||+|.++|+.
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhh
Confidence            4678999999999999999975

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=97.38  E-value=0.00032  Score=55.31  Aligned_cols=95  Identities=13%  Similarity=0.167  Sum_probs=66.9

Q ss_pred             HHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHH----HHHHhC-------
Q 048710           50 KLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQL----HIVVDS-------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~----~i~~~i-------  105 (208)
                      .-++|+.+|.+++             .+.+..|+|||||+ -+|.+.|.....  ++.-.+.-    +++.|+       
T Consensus       121 tsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~~w  197 (419)
T KOG0663|consen  121 TSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHDNW  197 (419)
T ss_pred             hhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhhce
Confidence            4589999999988             77788999999998 689999988764  34444333    444444       


Q ss_pred             -----------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                                   ........+..+-|..|-|||.+.+ ..|++..          |+++++.-
T Consensus       198 ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPl  277 (419)
T KOG0663|consen  198 ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPL  277 (419)
T ss_pred             eEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCC
Confidence                                         1112223456677999999999987 3444444          99988876


Q ss_pred             CC
Q 048710          146 IC  147 (208)
Q Consensus       146 ~~  147 (208)
                      +.
T Consensus       278 f~  279 (419)
T KOG0663|consen  278 FP  279 (419)
T ss_pred             CC
Confidence            65

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=96.97  E-value=0.0016  Score=50.30  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=49.2

Q ss_pred             ccccCCcCccCcccccc---CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccc
Q 048710          114 TQVQGTFGYLDLQYFQS---SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLK  180 (208)
Q Consensus       114 ~~~~gt~~y~aPE~~~~---~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  180 (208)
                      +...|-+.|||||-+.-   ..|+..+          |+.||..||....    ..+-  +...+.+ +.+..+++..  
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----tdFe--~ltkvln-~ePP~L~~~~--  319 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----TDFE--VLTKVLN-EEPPLLPGHM--  319 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----ccHH--HHHHHHh-cCCCCCCccc--
Confidence            45568899999998742   3444444          9999999998431    1121  1112222 2222223221  


Q ss_pred             cCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          181 EGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       181 ~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                          .....+.++...|+..| .+||.
T Consensus       320 ----gFSp~F~~fv~~CL~kd~r~RP~  342 (391)
T KOG0983|consen  320 ----GFSPDFQSFVKDCLTKDHRKRPK  342 (391)
T ss_pred             ----CcCHHHHHHHHHHhhcCcccCcc
Confidence                13446778888999999 99996

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=96.95  E-value=0.0098  Score=45.72  Aligned_cols=49  Identities=18%  Similarity=0.245  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHH
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQL   99 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~   99 (208)
                      .....+|++.|..++           -..+.+-||+|||+ -+|+..|+++..  .++-.+.-
T Consensus        45 ~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i--~l~pa~iK  104 (318)
T KOG0659|consen   45 NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNI--ILSPADIK  104 (318)
T ss_pred             cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhccccc--ccCHHHHH
Confidence            356789999999998           67788999999998 789999988654  35544433

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.73  E-value=0.0026  Score=54.52  Aligned_cols=84  Identities=11%  Similarity=0.150  Sum_probs=53.4

Q ss_pred             HHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------
Q 048710           51 LINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------  105 (208)
Q Consensus        51 f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------  105 (208)
                      ...|+-++...+           ...+.+.+.||||.+|||.+--+-..   ++...+..-.+.+.              
T Consensus        59 iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~gk~h  135 (829)
T KOG0576|consen   59 IQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQGKIH  135 (829)
T ss_pred             cccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcCCccc
Confidence            456666666666           77788999999999999998655432   23333333333332              


Q ss_pred             -------------------CCC-------CccccccccCCcCccCccccc---cCCCCcce
Q 048710          106 -------------------LAD-------QTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS  137 (208)
Q Consensus       106 -------------------~~~-------~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks  137 (208)
                                         +-+       .........||+.|||||+..   .+.|++++
T Consensus       136 RdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlc  196 (829)
T KOG0576|consen  136 RDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC  196 (829)
T ss_pred             ccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccc
Confidence                               001       111234567999999999974   45667666

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=96.72  E-value=0.01  Score=47.21  Aligned_cols=98  Identities=17%  Similarity=0.221  Sum_probs=69.1

Q ss_pred             hHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHH----HHHHHHHhC-
Q 048710           47 KVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWE----MQLHIVVDS-  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~----~r~~i~~~i-  105 (208)
                      ..+.-.+|+++|..++                .+.+-.|+|+|+| +-+|...|+.+.   .|+-.    ..++|+.|+ 
T Consensus        64 ~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLK  139 (359)
T KOG0660|consen   64 DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLK  139 (359)
T ss_pred             HHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcc
Confidence            3456789999999998                4567799999999 588998888653   23333    234666665 


Q ss_pred             ----------------------------------CCC---CccccccccCCcCccCcccccc-CCCCcce----------
Q 048710          106 ----------------------------------LAD---QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------  137 (208)
Q Consensus       106 ----------------------------------~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------  137 (208)
                                                        ..+   ....++..+.|-.|-|||.+.. ..||...          
T Consensus       140 yiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~A  219 (359)
T KOG0660|consen  140 YIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILA  219 (359)
T ss_pred             hhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHH
Confidence                                              111   1233467778999999999864 4555544          


Q ss_pred             eEecCCCCCCC
Q 048710          138 NLLTKEKPICL  148 (208)
Q Consensus       138 E~~tg~~p~~~  148 (208)
                      |+++|+.-|..
T Consensus       220 EmL~gkplFpG  230 (359)
T KOG0660|consen  220 EMLTGKPLFPG  230 (359)
T ss_pred             HHHcCCCCCCC
Confidence            99999987763

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.66  E-value=0.0032  Score=48.07  Aligned_cols=53  Identities=13%  Similarity=0.267  Sum_probs=34.9

Q ss_pred             HHHHHHHHHhhcc-------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           50 KLINEVVILSQIN-------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .-++|+++|..++                   .....+|+|+++|+ -+|.-.|.+...  .++....-+++.++
T Consensus        62 talreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~v--r~sls~Ikk~Mk~L  133 (376)
T KOG0669|consen   62 TALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRKV--RFSLSEIKKVMKGL  133 (376)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCccc--cccHHHHHHHHHHH
Confidence            4578888888876                   44556999999998 567777776533  34444444444444

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=96.56  E-value=0.0078  Score=51.05  Aligned_cols=84  Identities=14%  Similarity=0.141  Sum_probs=57.0

Q ss_pred             HHHHHHHHhhcc--------------cCCCeEEEEEeeC-CCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           51 LINEVVILSQIN--------------LETEVLLLVYEFI-SNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        51 f~~E~~~l~~l~--------------~~~~~~~lv~ey~-~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...|+.||..++              .+++.+||++|-- ++-+|.++|..+.   .++....--|..||          
T Consensus       613 Vp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~  689 (772)
T KOG1152|consen  613 VPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ  689 (772)
T ss_pred             cchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc
Confidence            457778887776              8889999999954 6678889987543   35555555555555          


Q ss_pred             -----------------------CCC-----CccccccccCCcCccCccccccCCCCcce
Q 048710          106 -----------------------LAD-----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       106 -----------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                                             .-+     .+......+||.+|.|||++.|.+|--|.
T Consensus       690 ~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~  749 (772)
T KOG1152|consen  690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKP  749 (772)
T ss_pred             CceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCc
Confidence                                   000     11122356799999999999877666554

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.41  E-value=0.0073  Score=50.64  Aligned_cols=98  Identities=15%  Similarity=0.142  Sum_probs=64.4

Q ss_pred             HHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCC------CHHHHHHHHHhC--
Q 048710           51 LINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPI------AWEMQLHIVVDS--  105 (208)
Q Consensus        51 f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l------~~~~r~~i~~~i--  105 (208)
                      =+.|+++|.+|+                 ...+++|||+|-.. -+|.+.|..-+....|      .+.+.+-||+..  
T Consensus       475 Gl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK  553 (752)
T KOG0670|consen  475 GLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK  553 (752)
T ss_pred             hhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH
Confidence            478999999998                 78899999999876 7899999864432233      234444444433  


Q ss_pred             --------------------------CCCCccccc-----cccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------------------LADQTYMTT-----QVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------------------~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                                .-+......     ...-+-.|-|||++.|-+|+-.-          |+.||+-
T Consensus       554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI  633 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI  633 (752)
T ss_pred             hcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence                                      011111111     11123479999999998777554          9999998


Q ss_pred             CCCCC
Q 048710          145 PICLT  149 (208)
Q Consensus       145 p~~~~  149 (208)
                      -|...
T Consensus       634 lFpG~  638 (752)
T KOG0670|consen  634 LFPGR  638 (752)
T ss_pred             ecCCC
Confidence            87643

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=96.22  E-value=0.028  Score=44.57  Aligned_cols=98  Identities=14%  Similarity=0.213  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHhhcc------------cCC------CeEEEEEeeCCCCChhhHhhcCCCC-CCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN------------LET------EVLLLVYEFISNGTVYQYINNQNEE-FPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~------~~~~lv~ey~~~GsL~~~l~~~~~~-~~l~~~~r~~i~~~i----  105 (208)
                      ..-.+|+.++.+++            ...      ..+++|+||++ -+|.+++...... ..++-...-+++.|+    
T Consensus        55 ~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl  133 (323)
T KOG0594|consen   55 STAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGL  133 (323)
T ss_pred             chhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHH
Confidence            34588999999888            222      38899999986 7899998764421 124433333444444    


Q ss_pred             -----------------------------------CCC-CccccccccCCcCccCccccccC-CCCcce----------e
Q 048710          106 -----------------------------------LAD-QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------N  138 (208)
Q Consensus       106 -----------------------------------~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E  138 (208)
                                                         ... .....+..++|..|-|||++.+. .|++..          |
T Consensus       134 ~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaE  213 (323)
T KOG0594|consen  134 AFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAE  213 (323)
T ss_pred             HHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHH
Confidence                                               000 11224566789999999999875 555554          9


Q ss_pred             EecCCCCCC
Q 048710          139 LLTKEKPIC  147 (208)
Q Consensus       139 ~~tg~~p~~  147 (208)
                      |++++.-|.
T Consensus       214 m~~~~~LFp  222 (323)
T KOG0594|consen  214 MFTRRPLFP  222 (323)
T ss_pred             HHhCCCCCC
Confidence            999777665

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.04  E-value=0.013  Score=50.96  Aligned_cols=39  Identities=10%  Similarity=0.220  Sum_probs=32.4

Q ss_pred             cccccccCCcCccCccccccCCCCcce-----------eEecCCCCCCCC
Q 048710          111 YMTTQVQGTFGYLDLQYFQSSPFTEKS-----------NLLTKEKPICLT  149 (208)
Q Consensus       111 ~~~~~~~gt~~y~aPE~~~~~~~~~ks-----------E~~tg~~p~~~~  149 (208)
                      .......|+-+|+|||++.+..|++..           .|++|+-|+...
T Consensus       479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a  528 (601)
T KOG0590|consen  479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVA  528 (601)
T ss_pred             hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccc
Confidence            445677899999999999988888876           899999998744

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=95.89  E-value=0.0081  Score=47.85  Aligned_cols=85  Identities=12%  Similarity=-0.017  Sum_probs=46.3

Q ss_pred             CcCccCcccccc-CCCCcce----------eEecCCCCCCCCCccCCcc-HHHHHHHHHhc--Cccc-------cccccc
Q 048710          119 TFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICLTTYEENKS-LTTYFLRAMKE--DRLF-------EIFDGL  177 (208)
Q Consensus       119 t~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~~~~~~~~~-l~~~~~~~~~~--~~~~-------~~~d~~  177 (208)
                      |-.|-|||.+-+ ..|+.+-          |++-|+.-|...   +..+ +...+.-.-..  .++.       +.-.|.
T Consensus       188 SRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~---s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~  264 (364)
T KOG0658|consen  188 SRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD---SSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQ  264 (364)
T ss_pred             eccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC---CHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcc
Confidence            568999999976 4555554          999998877632   2222 33222211100  0111       111222


Q ss_pred             cccc-----CcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          178 VLKE-----GGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       178 l~~~-----~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +...     .......+.+++..+++.-+ .+|-+
T Consensus       265 ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~  299 (364)
T KOG0658|consen  265 IKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS  299 (364)
T ss_pred             cccccceeecccCCCHHHHHHHHHHhccChhhcCC
Confidence            2211     11234456778888999998 88864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=95.56  E-value=0.019  Score=42.72  Aligned_cols=100  Identities=12%  Similarity=0.179  Sum_probs=62.0

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhc---CCCCCCCCHHHHHHHHHhC----
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINN---QNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~---~~~~~~l~~~~r~~i~~~i----  105 (208)
                      .+...+.+.|+.+..+..            .......+-||.|+ -||+.+-.+   .+.  ..+....=+||..|    
T Consensus        85 ~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~--~ipE~vlGkIa~Svv~al  161 (282)
T KOG0984|consen   85 SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGG--TIPEDVLGKIAVSVVHAL  161 (282)
T ss_pred             hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCC--cCchHHhhHhHHHHHHHH
Confidence            344567888888887655            55666778888886 667665332   222  34444333444444    


Q ss_pred             ------------------------------------CCCCccccccccCCcCccCcccccc----CCCCcce--------
Q 048710          106 ------------------------------------LADQTYMTTQVQGTFGYLDLQYFQS----SPFTEKS--------  137 (208)
Q Consensus       106 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~ks--------  137 (208)
                                                          ....+..-+...|--.|||||.+..    ..|+.||        
T Consensus       162 ~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt  241 (282)
T KOG0984|consen  162 EFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT  241 (282)
T ss_pred             HHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence                                                0001111123557789999999853    4677777        


Q ss_pred             --eEecCCCCCC
Q 048710          138 --NLLTKEKPIC  147 (208)
Q Consensus       138 --E~~tg~~p~~  147 (208)
                        |+.+++.||.
T Consensus       242 miElA~lr~PY~  253 (282)
T KOG0984|consen  242 MIEMAILRFPYE  253 (282)
T ss_pred             hhhhhhcccccc
Confidence              9999999998

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=95.29  E-value=0.15  Score=39.75  Aligned_cols=43  Identities=12%  Similarity=0.220  Sum_probs=32.8

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN   88 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~   88 (208)
                      ....+|.+|...--.|.             ...+.+.+++||+|.|+|.+-+-..+
T Consensus        62 tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G  117 (378)
T KOG1345|consen   62 TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG  117 (378)
T ss_pred             hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc
Confidence            34567888876544444             67788899999999999999887643

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.29  E-value=0.17  Score=40.49  Aligned_cols=26  Identities=19%  Similarity=0.524  Sum_probs=22.7

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCC
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQN   88 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~   88 (208)
                      .+.....++.|||+.|+|.++|++.+
T Consensus       142 ~e~~rviFiteymssgs~~~fLkrt~  167 (458)
T KOG1266|consen  142 EEKPRVIFITEYMSSGSLKQFLKRTK  167 (458)
T ss_pred             ccccceEEEEecccchhHHHHHHHHH
Confidence            47777889999999999999999754

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=95.29  E-value=0.0073  Score=47.52  Aligned_cols=94  Identities=17%  Similarity=0.197  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHH----HHHHHhC-
Q 048710           48 VNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQ----LHIVVDS-  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r----~~i~~~i-  105 (208)
                      .+.-.+|+.++..++                 .+....|+|||||+ ++|...++..     ++-...    ++++.+| 
T Consensus        59 akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~e-----lDH~tis~i~yq~~~~ik  132 (369)
T KOG0665|consen   59 AKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILME-----LDHETISYILYQMLCGIK  132 (369)
T ss_pred             chhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHh-----cchHHHHHHHHHHHHHHH
Confidence            345567777777766                 55567899999997 8999998843     333332    3444444 


Q ss_pred             ----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                                        ..+....++..+.|-.|-|||++-+..+.+..          |+++
T Consensus       133 ~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~  212 (369)
T KOG0665|consen  133 HLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELIL  212 (369)
T ss_pred             HHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhh
Confidence                                              22233345667788999999999887777776          8888


Q ss_pred             CCCCCC
Q 048710          142 KEKPIC  147 (208)
Q Consensus       142 g~~p~~  147 (208)
                      |+.-|.
T Consensus       213 ~~Vlf~  218 (369)
T KOG0665|consen  213 GTVLFP  218 (369)
T ss_pred             ceEEec
Confidence            876655

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=93.90  E-value=0.094  Score=41.53  Aligned_cols=97  Identities=14%  Similarity=0.183  Sum_probs=60.7

Q ss_pred             HHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCC--CCCCCCHHHHHHH----HHhC------
Q 048710           50 KLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQN--EEFPIAWEMQLHI----VVDS------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~--~~~~l~~~~r~~i----~~~i------  105 (208)
                      ..-+|+.+++.++            ..+...+|++||.+ -+|...|+.++  +.+.++-...-+|    +-|+      
T Consensus        73 SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N  151 (438)
T KOG0666|consen   73 SACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN  151 (438)
T ss_pred             HHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence            4567888888887            44888999999987 56777776543  2223443333333    3344      


Q ss_pred             -------------------------------------CCCCccccccccCCcCccCccccccC-CCCcce----------
Q 048710          106 -------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------  137 (208)
Q Consensus       106 -------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------  137 (208)
                                                           ..........++-|+.|-|||.+.|. .||...          
T Consensus       152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfa  231 (438)
T KOG0666|consen  152 WVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFA  231 (438)
T ss_pred             heeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHH
Confidence                                                 11122233456779999999999984 555544          


Q ss_pred             eEecCCCCCC
Q 048710          138 NLLTKEKPIC  147 (208)
Q Consensus       138 E~~tg~~p~~  147 (208)
                      |++|-+.-|.
T Consensus       232 ElLtl~PlF~  241 (438)
T KOG0666|consen  232 ELLTLEPLFK  241 (438)
T ss_pred             HHHccCcccc
Confidence            7766555443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=93.39  E-value=0.19  Score=37.20  Aligned_cols=38  Identities=24%  Similarity=0.445  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ..+.+|+.++..++           ...+..++||||++|++|.+++..
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~   92 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS   92 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh
Confidence            46788988888876           356677899999999999999874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=93.25  E-value=0.28  Score=40.28  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcC
Q 048710           49 NKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQ   87 (208)
Q Consensus        49 ~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~   87 (208)
                      ..|..++.++..-.                -++..+|+||.-++ .+|.++|...
T Consensus       283 ~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~  336 (598)
T KOG4158|consen  283 TAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR  336 (598)
T ss_pred             hhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC
Confidence            46788887776533                66778999999775 7899999754

>PRK09188 serine/threonine protein kinase; Provisional

Probab=93.22  E-value=0.14  Score=41.86  Aligned_cols=35  Identities=17%  Similarity=0.056  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHHhhcc--------cCCCeEEEEEeeCCCCChhh
Q 048710           48 VNKLINEVVILSQIN--------LETEVLLLVYEFISNGTVYQ   82 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~--------~~~~~~~lv~ey~~~GsL~~   82 (208)
                      ...|.+|+++|.+++        ...+..||||||+++++|..
T Consensus        65 ~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         65 RHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             HHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEccCCCCHHH
Confidence            457999999999997        44567899999999999973

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=93.02  E-value=0.14  Score=37.51  Aligned_cols=38  Identities=21%  Similarity=0.358  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ..+.+|++++..++           ...+..++||||++|++|.+++..
T Consensus        42 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~   90 (199)
T TIGR03724        42 ERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE   90 (199)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh
Confidence            56788999998876           345566899999999999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=92.94  E-value=0.71  Score=37.82  Aligned_cols=38  Identities=11%  Similarity=0.349  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      ....+|+++|..+.            ..++...+|+||++.-...++..+
T Consensus        79 ~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen   79 SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc
Confidence            45789999999887            788999999999999998887664

>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P

Probab=92.74  E-value=0.024  Score=37.27  Aligned_cols=26  Identities=19%  Similarity=0.377  Sum_probs=2.3

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHH
Q 048710            1 CITGGLGMLLLVTKVLLLCKFMERKK   26 (208)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~   26 (208)
                      |+|+++.+|++.+++++.||++|||.
T Consensus        26 AaGIGiL~VILgiLLliGCWYckRRS   51 (118)
T PF14991_consen   26 AAGIGILIVILGILLLIGCWYCKRRS   51 (118)
T ss_dssp             --SSS---------------------
T ss_pred             hccceeHHHHHHHHHHHhheeeeecc
Confidence            46777777777777888888887764

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=92.69  E-value=0.046  Score=46.69  Aligned_cols=83  Identities=13%  Similarity=0.190  Sum_probs=51.8

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHH-HHH---HHHHhC--------------------------CCCC---
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWE-MQL---HIVVDS--------------------------LADQ---  109 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~-~r~---~i~~~i--------------------------~~~~---  109 (208)
                      ..++..+++.+|.-+|.|...+.+...   ++.. .+.   .++.++                          ....   
T Consensus        67 qt~~kl~l~ld~~rgg~lft~l~~~~~---f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfgl  143 (612)
T KOG0603|consen   67 QTDGKLYLILDFLRGGDLFTRLSKEVM---FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGL  143 (612)
T ss_pred             ccccchhHhhhhcccchhhhccccCCc---hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchh
Confidence            778889999999999999999886543   2221 111   222222                          0000   


Q ss_pred             ---ccccccccCCcCccCccccccCCCCcce--------eEecCCCCCCC
Q 048710          110 ---TYMTTQVQGTFGYLDLQYFQSSPFTEKS--------NLLTKEKPICL  148 (208)
Q Consensus       110 ---~~~~~~~~gt~~y~aPE~~~~~~~~~ks--------E~~tg~~p~~~  148 (208)
                         .......+||.-|||||+..+.....-.        |++||..|+..
T Consensus       144 ske~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  144 SKEAVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             hhHhHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence               0111233789999999999843222211        99999999984

>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences

Probab=91.87  E-value=0.43  Score=30.38  Aligned_cols=11  Identities=27%  Similarity=0.462  Sum_probs=5.7

Q ss_pred             HHHHHHHHHhh
Q 048710           50 KLINEVVILSQ   60 (208)
Q Consensus        50 ~f~~E~~~l~~   60 (208)
                      .|.+|+-.+.+
T Consensus        76 ~~~reLval~~   86 (98)
T PF07204_consen   76 TFHRELVALTR   86 (98)
T ss_pred             HHHHHHHHHhc
Confidence            45555555543

p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=91.75  E-value=0.38  Score=35.38  Aligned_cols=51  Identities=16%  Similarity=0.147  Sum_probs=34.8

Q ss_pred             HHHHHHHhhcc---------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           52 INEVVILSQIN---------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        52 ~~E~~~l~~l~---------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ..|.+.+.++.         ......+|||||++++++...+....   .+++....+++.++
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi  126 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQV  126 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcEEEecCCEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHH
Confidence            56888888886         11122389999999988876543322   47777777777665

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=90.62  E-value=0.44  Score=40.98  Aligned_cols=37  Identities=19%  Similarity=0.326  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhh
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYIN   85 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~   85 (208)
                      ..|.+|++++.+++           ...+..++||||+++++|.+++.
T Consensus       381 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        381 ERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             HHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH
Confidence            56889999999987           34456789999999999999886

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=87.95  E-value=0.13  Score=30.35  Aligned_cols=20  Identities=30%  Similarity=0.482  Sum_probs=0.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFM   22 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~   22 (208)
                      |+++|+++.+++++++++++
T Consensus        17 G~Vvgll~ailLIlf~iyR~   36 (64)
T PF01034_consen   17 GGVVGLLFAILLILFLIYRM   36 (64)
T ss_dssp             --------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            33444444444444444433

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=87.64  E-value=0.97  Score=33.07  Aligned_cols=52  Identities=17%  Similarity=0.139  Sum_probs=33.1

Q ss_pred             HHHHHHHHHhhcc---------cCCCeEEEEEeeCCCCChhhH-hhcCCCCCCCCHHHHHHHHHhC
Q 048710           50 KLINEVVILSQIN---------LETEVLLLVYEFISNGTVYQY-INNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~---------~~~~~~~lv~ey~~~GsL~~~-l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+..|.+.+.+++         ......+|||||++++++... +.+.    .++.....+++.++
T Consensus        65 ~~~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~----~~~~~~~~~i~~~l  126 (190)
T cd05145          65 WAEKEFRNLKRLYEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKDV----PLEEEEAEELYEQV  126 (190)
T ss_pred             HHHHHHHHHHHHHhCCCCCceEEEecCCEEEEEEecCCCchhhhhhhc----cCCHHHHHHHHHHH
Confidence            3467888888876         111224899999999865443 4321    35566666676666

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=86.77  E-value=0.78  Score=24.03  Aligned_cols=6  Identities=33%  Similarity=0.949  Sum_probs=2.3

Q ss_pred             HHHHHH
Q 048710            6 LGMLLL   11 (208)
Q Consensus         6 ~~~~~~   11 (208)
                      +|++++
T Consensus        14 vg~~ii   19 (38)
T PF02439_consen   14 VGMAII   19 (38)
T ss_pred             HHHHHH
Confidence            333433

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PRK12274 serine/threonine protein kinase; Provisional

Probab=86.63  E-value=1.1  Score=33.70  Aligned_cols=37  Identities=19%  Similarity=0.184  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHhhcc--------cCCCeEEEEEeeCCCCChhhHhh
Q 048710           49 NKLINEVVILSQIN--------LETEVLLLVYEFISNGTVYQYIN   85 (208)
Q Consensus        49 ~~f~~E~~~l~~l~--------~~~~~~~lv~ey~~~GsL~~~l~   85 (208)
                      ..|.+|+++|.++.        ..-+..+++|||++|.+|.+.+.
T Consensus        46 ~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~   90 (218)
T PRK12274         46 WLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAAMYQRPP   90 (218)
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCccHHhhhh
Confidence            36899999999996        33355699999999999987653

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=86.06  E-value=1.2  Score=32.84  Aligned_cols=39  Identities=18%  Similarity=0.315  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcC
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQ   87 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~   87 (208)
                      ..-.+|.+++.+++           .+.+...|+|||++|-.|.+.|...
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~   93 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA   93 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc
Confidence            45789999999988           7777888999999999999999865

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=86.03  E-value=1.1  Score=30.45  Aligned_cols=24  Identities=17%  Similarity=0.317  Sum_probs=11.1

Q ss_pred             hhHHHHHH-HHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLL-LVTKVLLLCKFMERKK   26 (208)
Q Consensus         3 ~~~~~~~~-~~~~~~~~~~~~~~~~   26 (208)
                      |+++|++. ++..+++++++.+|++
T Consensus        68 ~Ii~gv~aGvIg~Illi~y~irR~~   92 (122)
T PF01102_consen   68 GIIFGVMAGVIGIILLISYCIRRLR   92 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ehhHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555554 3444444444444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=85.69  E-value=0.088  Score=28.02  Aligned_cols=18  Identities=0%  Similarity=-0.210  Sum_probs=7.0

Q ss_pred             hhHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCK   20 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~   20 (208)
                      |+++-++++++++.+++.
T Consensus        16 ~VvVPV~vI~~vl~~~l~   33 (40)
T PF08693_consen   16 GVVVPVGVIIIVLGAFLF   33 (40)
T ss_pred             EEEechHHHHHHHHHHhh
Confidence            334434444433333333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=85.23  E-value=0.65  Score=42.66  Aligned_cols=36  Identities=22%  Similarity=0.249  Sum_probs=29.2

Q ss_pred             ccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          114 TQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       114 ~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                      ....||..|.+||...+.......          |.++|..|++..
T Consensus       993 ~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen  993 HAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             ccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence            456789999999999876666555          999999999854

>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase

Probab=85.03  E-value=3  Score=22.14  Aligned_cols=21  Identities=14%  Similarity=0.313  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 048710            6 LGMLLLVTKVLLLCKFMERKK   26 (208)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~   26 (208)
                      ++++.+.++..++++++..|+
T Consensus        17 Vglv~i~iva~~iYRKw~aRk   37 (43)
T PF08114_consen   17 VGLVGIGIVALFIYRKWQARK   37 (43)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            445555666666677665554

Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].

>smart00090 RIO RIO-like kinase

Probab=85.03  E-value=1.8  Score=33.11  Aligned_cols=53  Identities=17%  Similarity=0.047  Sum_probs=34.5

Q ss_pred             HHHHHHHHHhhcc---------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           50 KLINEVVILSQIN---------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~---------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+..|...+.++.         ...+..+|||||+++++|........   .+.......++.++
T Consensus        96 ~~~~E~~~L~~L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi  157 (237)
T smart00090       96 WAEKEFRNLQRLYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDI  157 (237)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeeEecCceEEEEEecCCcccccccccC---CcchHHHHHHHHHH
Confidence            4678999998887         12234589999999999887653322   23333444555555

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=84.80  E-value=1.5  Score=33.48  Aligned_cols=34  Identities=18%  Similarity=0.302  Sum_probs=27.3

Q ss_pred             HHHHHHHHhhcc-----------c--C------CCeEEEEEeeCCCCChhhHh
Q 048710           51 LINEVVILSQIN-----------L--E------TEVLLLVYEFISNGTVYQYI   84 (208)
Q Consensus        51 f~~E~~~l~~l~-----------~--~------~~~~~lv~ey~~~GsL~~~l   84 (208)
                      |.+|+..+.++.           .  .      .+..+|||||++|.+|.++.
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh
Confidence            689988888887           1  1      24588999999999998874

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=84.02  E-value=1.3  Score=30.38  Aligned_cols=24  Identities=13%  Similarity=0.059  Sum_probs=12.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFMERKK   26 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~   26 (208)
                      +++|++++|++++++++.++|+++
T Consensus         6 ~iii~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    6 AIIIVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc
Confidence            334444445555555555555554

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF10883 DUF2681: Protein of unknown function (DUF2681); InterPro: IPR020274 This entry contains membrane proteins with no known function

Probab=83.63  E-value=9  Score=24.35  Aligned_cols=27  Identities=30%  Similarity=0.287  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048710           11 LVTKVLLLCKFMERKKEIKLKQKLFKR   37 (208)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~   37 (208)
                      .++++++++.+++-++..+..+++..+
T Consensus        12 ~v~~~i~~y~~~k~~ka~~~~~kL~~e   38 (87)
T PF10883_consen   12 AVVALILAYLWWKVKKAKKQNAKLQKE   38 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444444444444444444433

>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins

Probab=81.10  E-value=0.49  Score=31.98  Aligned_cols=24  Identities=21%  Similarity=0.120  Sum_probs=0.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFMERKK   26 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~   26 (208)
                      +++++.+++|++++..+..++|++
T Consensus        82 ~~sal~v~lVl~llsg~lv~rrcr  105 (129)
T PF12191_consen   82 LGSALSVVLVLALLSGFLVWRRCR  105 (129)
T ss_dssp             ------------------------
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhh
Confidence            344444444444433333344433

Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=80.87  E-value=0.16  Score=35.54  Aligned_cols=19  Identities=26%  Similarity=0.361  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 048710            7 GMLLLVTKVLLLCKFMERK   25 (208)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~   25 (208)
                      |++++++++.++|+++.|+
T Consensus        59 Gg~ill~il~lvf~~c~r~   77 (154)
T PF04478_consen   59 GGPILLGILALVFIFCIRR   77 (154)
T ss_pred             cHHHHHHHHHhheeEEEec
Confidence            3344444444444444333

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-16
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-10
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 74.2 bits (183), Expect = 4e-16
 Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 65/220 (29%)

Query: 53  NEVVILSQI---NL--------ETEVLLLVYEFISNGTVYQYI-NNQNEEFPIAWEMQLH 100
            E+  LS     +L        E   ++L+Y+++ NG + +++  +      ++WE +L 
Sbjct: 84  TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143

Query: 101 IVVDS------------------------------------LA------DQTYMTTQVQG 118
           I + +                                    ++      DQT+++T V+G
Sbjct: 144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203

Query: 119 TFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSLTTYFLRAMKED 168
           T GY+D +YF     TEKS+          +L     I  +   E  +L  + + +    
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263

Query: 169 RLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM 207
           +L +I D  +  +   + +        +CL L+ E +P+M
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 58.7 bits (143), Expect = 1e-10
 Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 69/222 (31%)

Query: 52  INEVVILSQI---NL--------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLH 100
             E+ ++++    NL        + + L LVY ++ NG++   ++  +   P++W M+  
Sbjct: 78  DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137

Query: 101 IVVDS------------------------------------LA------DQTYMTTQVQG 118
           I   +                                    LA       QT MT+++ G
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVG 197

Query: 119 TFGYLDLQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSLTTYFLRAMKED 168
           T  Y+  +       T KS+          ++T    +      +   L         E+
Sbjct: 198 TTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDIKEEIEDEE 254

Query: 169 R-LFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLNEKK-PTMR 208
           + + +  D   + +     +  +  +  +CL+  + K P ++
Sbjct: 255 KTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 39/225 (17%), Positives = 80/225 (35%), Gaps = 69/225 (30%)

Query: 52  INEVVILSQI---NL--------ETEVLLLVYEFISNGTVYQYI-NNQNEEFPIAWEMQL 99
             EV ++S     NL             LLVY +++NG+V   +      + P+ W  + 
Sbjct: 75  QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134

Query: 100 HIVVDS---------------------------------------LA-----DQTYMTTQ 115
            I + S                                       LA       T++TT 
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 194

Query: 116 VQGTFGYLDLQYFQSSPFTEKSN----------LLTKEKPI--CLTTYEENKSLTTYFLR 163
           V+GT G++  +Y  +   +EK++          L+T ++         +++  L  +   
Sbjct: 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254

Query: 164 AMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM 207
            +KE +L  + D  +      +E+  ++++   C   +  ++P M
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 18/84 (21%)

Query: 22  MERKKEIKLKQKLFKRNGVKLI-YEGKVNKLINEVVILSQINLETEVLLLVYEFISNGTV 80
            + + E+     +   N ++ I  E +   +  +             L L+  F   G++
Sbjct: 63  WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD-------------LWLITAFHEKGSL 109

Query: 81  YQYINNQNEEFPIAWEMQLHIVVD 104
             ++        ++W    HI   
Sbjct: 110 SDFLKAN----VVSWNELCHIAET 129

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 16/81 (19%)

Query: 40  VKLIYEGKVNK-----LINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQY 83
           VK++ E   +       + EV I+ ++             +   L +V E++S G++Y+ 
Sbjct: 65  VKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRL 124

Query: 84  INNQNEEFPIAWEMQLHIVVD 104
           ++       +    +L +  D
Sbjct: 125 LHKSGAREQLDERRRLSMAYD 145

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.88
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.88
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.88
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.84
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.8
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.78
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.77
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.76
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.76
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.73
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.73
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.73
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.67
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.67
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.63
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.61
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.6
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.58
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.58
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.58
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.57
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.57
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.57
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.57
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.56
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.55
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.55
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.54
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.54
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.54
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.54
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.53
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.52
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.52
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.52
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.52
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.51
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.51
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.51
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.51
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.5
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.5
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.5
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.5
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.5
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.5
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.5
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.5
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.49
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.49
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.49
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.49
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.49
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.49
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.49
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.49
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.48
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.48
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.48
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.47
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.47
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.47
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.47
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.47
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.47
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.47
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.46
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.46
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.46
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.46
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.46
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.45
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.45
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.45
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.45
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.45
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.45
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.45
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.45
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.45
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.45
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.45
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.45
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.44
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.44
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.44
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.44
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.44
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.44
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.44
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.44
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.44
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.44
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.44
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.44
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.44
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.43
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.43
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.43
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.43
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.43
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.43
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.42
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.42
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.42
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.42
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.41
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.41
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.41
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.41
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.41
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.41
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.41
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.4
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.4
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.4
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.4
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.4
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.4
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.4
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.4
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.4
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.4
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.39
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.39
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.39
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.39
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.39
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.39
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.39
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.39
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.38
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.38
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.38
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.38
3bhy_A	283	Death-associated protein kinase 3; death associate	99.38
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.38
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.38
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.38
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.38
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.38
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.37
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.37
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.37
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.37
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.37
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.36
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.36
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.36
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.36
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.36
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.36
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.36
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.36
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.36
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.36
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.35
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.35
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.35
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.34
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.34
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.34
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.34
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.34
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.33
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.33
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.33
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.33
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.33
3niz_A	311	Rhodanese family protein; structural genomics, str	99.33
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.32
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.31
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.31
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.31
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.31
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.31
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.31
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.31
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.31
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.3
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.3
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.3
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.29
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.29
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.29
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.29
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.28
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.28
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.28
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.27
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.27
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.26
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.26
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.26
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.25
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.24
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.23
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.23
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.23
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.23
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.23
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.22
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.21
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.2
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.2
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.19
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.19
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.19
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.19
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.18
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.17
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.17
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.16
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.15
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.11
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.03
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.03
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.98
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.91
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.9
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.84
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.81
3uqc_A	286	Probable conserved transmembrane protein; structur	98.7
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.66
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.54
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.43
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.61
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	94.27
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	93.28
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	93.01
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	91.92
2l9u_A	40	Receptor tyrosine-protein kinase ERBB-3; transmenb	88.26
1pfi_A	46	Major coat protein of PF1 virus; complex(viral coa	80.66
1iij_A	35	ERBB-2 receptor protein-tyrosine kinase; alpha-hel	80.4

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=5.7e-24  Score=166.96  Aligned_cols=146  Identities=12%  Similarity=0.227  Sum_probs=108.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHHHH
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLHIV  102 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~i~  102 (208)
                      ..++|.+|+.+|++++           .+.+..+||||||++|||.++|+....             ...++|.+++.|+
T Consensus        72 ~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  151 (308)
T 4gt4_A           72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV  151 (308)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence            4578999999999999           667889999999999999999975321             1258999999999


Q ss_pred             HhC---------------------------------C---------CCCccccccccCCcCccCccccccCCCCcce---
Q 048710          103 VDS---------------------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS---  137 (208)
Q Consensus       103 ~~i---------------------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks---  137 (208)
                      .+|                                 +         .+.........||++|||||++.++.++.++   
T Consensus       152 ~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVw  231 (308)
T 4gt4_A          152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW  231 (308)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhh
Confidence            988                                 0         0111223456799999999999999999999   


Q ss_pred             -------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                             |++| |..||....      ..+ +...+..+...         +.|.+++..+.+|+.+||+.+ ++||||+
T Consensus       232 SfGvvl~El~t~g~~Pf~~~~------~~~-~~~~i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~  295 (308)
T 4gt4_A          232 SYGVVLWEVFSYGLQPYCGYS------NQD-VVEMIRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFK  295 (308)
T ss_dssp             HHHHHHHHHHTTTCCTTTTCC------HHH-HHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhCCCCCCCCCC------HHH-HHHHHHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence                   9999 899997432      111 22333333321         122234456788999999999 9999973

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.88  E-value=5.8e-24  Score=166.28  Aligned_cols=149  Identities=13%  Similarity=0.274  Sum_probs=109.3

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC----------CCCCCCHHHHHHHH
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN----------EEFPIAWEMQLHIV  102 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~----------~~~~l~~~~r~~i~  102 (208)
                      +....++|.+|+++|++++           .+.+..|||||||++|||.++|+...          ....++|.+++.|+
T Consensus        55 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  134 (299)
T 4asz_A           55 SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA  134 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence            3445678999999999999           67788999999999999999997532          22369999999999


Q ss_pred             HhC------------------------------------------CCCCccccccccCCcCccCccccccCCCCcce---
Q 048710          103 VDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS---  137 (208)
Q Consensus       103 ~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks---  137 (208)
                      .+|                                          ..+.........||++|||||++.++.++.++   
T Consensus       135 ~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVw  214 (299)
T 4asz_A          135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  214 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHH
Confidence            988                                          00111122345689999999999999999999   


Q ss_pred             -------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 -------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 -------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                             |++| |+.||.....      . .+...+..+...         ..|..++..+.+|+.+||+.+ ++||||+
T Consensus       215 S~Gvvl~Ellt~G~~Pf~~~~~------~-~~~~~i~~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~  278 (299)
T 4asz_A          215 SLGVVLWEIFTYGKQPWYQLSN------N-EVIECITQGRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIK  278 (299)
T ss_dssp             HHHHHHHHHHTTTCCTTTTSCH------H-HHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHHcCCCCCCCCCCH------H-HHHHHHHcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence                   9999 8999984321      1 122233334321         112233446778889999999 9999973

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.88  E-value=6.8e-23  Score=160.51  Aligned_cols=151  Identities=15%  Similarity=0.206  Sum_probs=105.8

Q ss_pred             chhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           44 YEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +....+.|.+|+.+|++++          ...+.+|||||||+||||.++|+....  .++|.+++.|+.+|        
T Consensus        72 ~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH  149 (307)
T 3omv_A           72 TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLH  149 (307)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            4455678999999999999          556778999999999999999987554  59999999999988        


Q ss_pred             -------------------------C---------CCCccccccccCCcCccCcccccc---CCCCcce----------e
Q 048710          106 -------------------------L---------ADQTYMTTQVQGTFGYLDLQYFQS---SPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ks----------E  138 (208)
                                               +         ...........||++|||||++.+   +.++.++          |
T Consensus       150 ~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~E  229 (307)
T 3omv_A          150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE  229 (307)
T ss_dssp             HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHH
T ss_pred             HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHH
Confidence                                     0         011122345689999999999964   4688888          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||.....      ...+......+..    .|.+. ..+.+++..+.+|+.+||+.+ ++||||
T Consensus       230 lltg~~Pf~~~~~------~~~~~~~~~~~~~----~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~  288 (307)
T 3omv_A          230 LMTGELPYSHINN------RDQIIFMVGRGYA----SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLF  288 (307)
T ss_dssp             HHHSSCTTTTCCC------HHHHHHHHHTTCC----CCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCH
T ss_pred             HHHCCCCCCCCCh------HHHHHHHHhcCCC----CCCcc-cccccchHHHHHHHHHHcCCCHhHCcCH
Confidence            9999999974321      1222223333311    12111 122234456778888999999 999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.88  E-value=1.5e-23  Score=166.07  Aligned_cols=149  Identities=15%  Similarity=0.255  Sum_probs=106.7

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC------------CCCCCHHHHHH
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE------------EFPIAWEMQLH  100 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~------------~~~l~~~~r~~  100 (208)
                      +....++|.+|+++|++++           .+.+..|||||||++|+|.++|++...            ...++|.+++.
T Consensus        83 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  162 (329)
T 4aoj_A           83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA  162 (329)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence            3445678999999999999           677889999999999999999986431            12599999999


Q ss_pred             HHHhC------------------------------------------CCCCccccccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      |+.+|                                          ..+.........||++|||||++.+..++.++ 
T Consensus       163 i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sD  242 (329)
T 4aoj_A          163 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  242 (329)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcccc
Confidence            99988                                          00111123456799999999999999999999 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |++| |+.||....      ..+ +...+..+..     +    ..|..++..+.+|+.+||+.+ ++|||
T Consensus       243 vwS~Gvvl~Ellt~G~~Pf~~~~------~~~-~~~~i~~g~~-----~----~~p~~~~~~~~~li~~cl~~dP~~RPs  306 (329)
T 4aoj_A          243 VWSFGVVLWEIFTYGKQPWYQLS------NTE-AIDCITQGRE-----L----ERPRACPPEVYAIMRGCWQREPQQRHS  306 (329)
T ss_dssp             HHHHHHHHHHHHTTSCCTTCSSC------HHH-HHHHHHHTCC-----C----CCCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred             ccchHHHHHHHHcCCCCCCCCCC------HHH-HHHHHHcCCC-----C----CCcccccHHHHHHHHHHcCcChhHCcC
Confidence                     9999 899997432      111 2222333321     1    112223346778889999999 99999


Q ss_pred             CC
Q 048710          207 MR  208 (208)
Q Consensus       207 m~  208 (208)
                      |+
T Consensus       307 ~~  308 (329)
T 4aoj_A          307 IK  308 (329)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.84  E-value=5.7e-22  Score=158.23  Aligned_cols=148  Identities=15%  Similarity=0.212  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQL   99 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~   99 (208)
                      ...++|.+|+++|.+++             .+.+.++||||||++|+|.++|++...             ...++|.+++
T Consensus       109 ~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~  188 (353)
T 4ase_A          109 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI  188 (353)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHH
Confidence            44678999999999985             234568999999999999999975321             1258999999


Q ss_pred             HHHHhC-----------------------------------------CCC-CccccccccCCcCccCccccccCCCCcce
Q 048710          100 HIVVDS-----------------------------------------LAD-QTYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       100 ~i~~~i-----------------------------------------~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .++.+|                                         ..+ .........||+.|||||++.++.++.++
T Consensus       189 ~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ks  268 (353)
T 4ase_A          189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  268 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcc
Confidence            888887                                         011 11223456789999999999999999999


Q ss_pred             ----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          138 ----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       138 ----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                                |++| |+.||......      ..+...+.++...     .+    |..+...+.+++.+||+.+ ++||
T Consensus       269 DVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~~i~~g~~~-----~~----p~~~~~~~~~li~~c~~~dP~~RP  333 (353)
T 4ase_A          269 DVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRP  333 (353)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cEeehHHHHHHHHhCCCCCCCCCCHH------HHHHHHHHcCCCC-----CC----CccCCHHHHHHHHHHcCcChhHCc
Confidence                      9998 99999743211      1233333333221     11    2223345678888999999 9999


Q ss_pred             CCC
Q 048710          206 TMR  208 (208)
Q Consensus       206 sm~  208 (208)
                      ||+
T Consensus       334 t~~  336 (353)
T 4ase_A          334 TFS  336 (353)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            973

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.80  E-value=1.8e-19  Score=140.03  Aligned_cols=146  Identities=14%  Similarity=0.250  Sum_probs=101.1

Q ss_pred             chhhHHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .+...+.|.+|+++|++++               ...+.+|||||||++|+|.++|.+..   .+++.....++.+|   
T Consensus        65 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~a  141 (290)
T 3fpq_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKG  141 (290)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHH
Confidence            4445678999999999999               12456899999999999999998643   58888887777766   


Q ss_pred             -----------------------C---------------CCCccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 -----------------------L---------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 -----------------------~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                             .               ..........+||+.|||||++.+ .++.++          
T Consensus       142 L~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvily  220 (290)
T 3fpq_A          142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCML  220 (290)
T ss_dssp             HHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHH
Confidence                                   0               001122346789999999999865 688888          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||....     . ...+......+..+..+++    ..+    ..+.+++.+||+.+ ++|||+
T Consensus       221 elltg~~Pf~~~~-----~-~~~~~~~i~~~~~~~~~~~----~~~----~~~~~li~~~L~~dP~~R~s~  277 (290)
T 3fpq_A          221 EMATSEYPYSECQ-----N-AAQIYRRVTSGVKPASFDK----VAI----PEVKEIIEGCIRQNKDERYSI  277 (290)
T ss_dssp             HHHHSSCTTTTCS-----S-HHHHHHHHTTTCCCGGGGG----CCC----HHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHCCCCCCCCC-----c-HHHHHHHHHcCCCCCCCCc----cCC----HHHHHHHHHHccCChhHCcCH
Confidence            9999999997321     1 1223333333322222221    122    24567777999999 999986

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.78  E-value=1.4e-19  Score=143.84  Aligned_cols=147  Identities=18%  Similarity=0.243  Sum_probs=104.6

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....+.|.+|+++|.+++           .+.+.+|||||||+||+|.++|...... .+++.+...++.+|       
T Consensus        63 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~-~~~e~~~~~~~~qi~~aL~yl  141 (350)
T 4b9d_A           63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGV-LFQEDQILDWFVQICLALKHV  141 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            4445678999999999999           7788999999999999999999765433 57777777777666       


Q ss_pred             --------------------------C------CCC-ccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 --------------------------L------ADQ-TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------------------~------~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                                +      .+. .......+||+.|||||++.+..|+.++          ||+||
T Consensus       142 H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG  221 (350)
T 4b9d_A          142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL  221 (350)
T ss_dssp             HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHC
Confidence                                      0      000 1112356799999999999999999988          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....      ..+.+.... .+..+.     +....+    ..+.++..+||+.| ++|||+
T Consensus       222 ~~PF~~~~------~~~~~~~i~-~~~~~~-----~~~~~s----~~~~~li~~~L~~dP~~R~s~  271 (350)
T 4b9d_A          222 KHAFEAGS------MKNLVLKII-SGSFPP-----VSLHYS----YDLRSLVSQLFKRNPRDRPSV  271 (350)
T ss_dssp             SCSCCCSS------HHHHHHHHH-HTCCCC-----CCTTSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCcC------HHHHHHHHH-cCCCCC-----CCccCC----HHHHHHHHHHccCChhHCcCH
Confidence            99997431      222222222 333211     111222    34567777999999 999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.77  E-value=1.8e-18  Score=136.24  Aligned_cols=162  Identities=25%  Similarity=0.446  Sum_probs=131.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-CCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-EFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~l~~~~r~~i~~~i--------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..++||||+++|+|.+++..... ...++|..+..++.++        
T Consensus        77 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  156 (321)
T 2qkw_B           77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH  156 (321)
T ss_dssp             SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence            44678999999999988           667889999999999999999986542 2258999999988887        


Q ss_pred             -------------------------C---------CCCccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 -------------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 -------------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                               +         ...........||+.|+|||.+.+..++.++          |++|
T Consensus       157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  236 (321)
T 2qkw_B          157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC  236 (321)
T ss_dssp             HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHh
Confidence                                     0         0011112234589999999999888888888          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....+........|.......+.+...+++.+....+.+....+.+++.+||+.+ ++|||+
T Consensus       237 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  303 (321)
T 2qkw_B          237 ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM  303 (321)
T ss_dssp             CCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCH
Confidence            999998766666667777877777777888888888877778888999999999999999 999996

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.76  E-value=5e-19  Score=138.73  Aligned_cols=134  Identities=13%  Similarity=0.187  Sum_probs=86.1

Q ss_pred             CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------------------------------------
Q 048710           66 EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------------------------------------  105 (208)
Q Consensus        66 ~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------------------------------------  105 (208)
                      ..+|||||||+||||.++|++.    .++|..+++++.++                                        
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki  149 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             eEEEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEE
Confidence            3689999999999999999864    58999999988877                                        


Q ss_pred             -CCC--------C---ccccccccCCcCccCccccccC------CCCcce----------eEecCCCCCCCCCccCC---
Q 048710          106 -LAD--------Q---TYMTTQVQGTFGYLDLQYFQSS------PFTEKS----------NLLTKEKPICLTTYEEN---  154 (208)
Q Consensus       106 -~~~--------~---~~~~~~~~gt~~y~aPE~~~~~------~~~~ks----------E~~tg~~p~~~~~~~~~---  154 (208)
                       +-+        .   ........||++|||||++.+.      .++.++          |++||..|+........   
T Consensus       150 ~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~  229 (303)
T 3hmm_A          150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY  229 (303)
T ss_dssp             CCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred             EeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccch
Confidence             000        0   0112245799999999999754      356666          99999877643221110   


Q ss_pred             -----ccHHHHHHHHHhcCcccccccccccccC-cHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          155 -----KSLTTYFLRAMKEDRLFEIFDGLVLKEG-GKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       155 -----~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           ......+......+    .++|.++... +.+.+..+.+|+.+||+.+ ++||||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~  285 (303)
T 3hmm_A          230 DLVPSDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA  285 (303)
T ss_dssp             TTSCSSCCHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCH
T ss_pred             hcccccchHHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCH
Confidence                 01122222232222    2334443322 2366778889999999999 999997

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.76  E-value=3.7e-19  Score=139.26  Aligned_cols=141  Identities=14%  Similarity=0.142  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+++|.+++           .+.+..|||||||+||+|.++|.+..   .++......++.++          
T Consensus        75 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~  151 (311)
T 4aw0_A           75 KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK  151 (311)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999998           77889999999999999999998654   47777777777766          


Q ss_pred             -------------------------------C-CCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------------------------L-ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------------------------~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                                     . ..........+||+.|||||++.+..++.++          ||+||+
T Consensus       152 ~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~  231 (311)
T 4aw0_A          152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL  231 (311)
T ss_dssp             TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                           0 0111223467899999999999999999888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +.....++.+      .++...+    ..+.++..+|++.| .+|||.
T Consensus       232 ~PF~~~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~dli~~lL~~dp~~R~t~  279 (311)
T 4aw0_A          232 PPFRAGN------EGL-IFAKIIKLEY------DFPEKFF----PKARDLVEKLLVLDATKRLGC  279 (311)
T ss_dssp             CSSCCSS------HHH-HHHHHHHTCC------CCCTTCC----HHHHHHHHHHSCSSGGGSTTS
T ss_pred             CCCCCCC------HHH-HHHHHHcCCC------CCCcccC----HHHHHHHHHHccCCHhHCcCh
Confidence            9997421      112 2222223322      1111222    23456777999999 999985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.73  E-value=2e-18  Score=137.08  Aligned_cols=142  Identities=15%  Similarity=0.209  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.+|.+++           .+.+.+|||||||++|+|.+++.+.    .+++.+...++.++           
T Consensus       115 ~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~~  190 (346)
T 4fih_A          115 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQG  190 (346)
T ss_dssp             GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456899999999998           7788999999999999999999763    48888888888777           


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                                   ...........+||+.|||||++.+..|+.++          ||+||+.||
T Consensus       191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF  270 (346)
T 4fih_A          191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  270 (346)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                                         11112223567899999999999999999988          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ....+ ..+..+..     +.+.  ........+.++..+||+.| ++|||+
T Consensus       271 ~~~~------~~~~~-~~i~~~~~-----~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta  318 (346)
T 4fih_A          271 FNEP------PLKAM-KMIRDNLP-----PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATA  318 (346)
T ss_dssp             TTSC------HHHHH-HHHHHSSC-----CCCS--CGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCcC------HHHHH-HHHHcCCC-----CCCC--ccccCCHHHHHHHHHHcCCChhHCcCH
Confidence            7421      11111 22222211     1111  11112234566777999999 999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.73  E-value=5.1e-19  Score=138.31  Aligned_cols=139  Identities=14%  Similarity=0.131  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+++|.+++           .+.+..|||||||+||+|.++|.+..   .+++.+...++.++           
T Consensus        70 ~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~  146 (304)
T 3ubd_A           70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLG  146 (304)
T ss_dssp             CC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            346899999999998           77889999999999999999998654   58888877777777           


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                                   ..+.........||+.|||||++.+..++.++          ||+||+.||
T Consensus       147 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF  226 (304)
T 3ubd_A          147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF  226 (304)
T ss_dssp             CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence                                         01112223467899999999999999999988          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      ....      ..+.... ..++..      .++...+    ..+.++..+||+.| ++|||
T Consensus       227 ~~~~------~~~~~~~-i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~t  270 (304)
T 3ubd_A          227 QGKD------RKETMTM-ILKAKL------GMPQFLS----PEAQSLLRMLFKRNPANRLG  270 (304)
T ss_dssp             CCSS------HHHHHHH-HHHCCC------CCCTTSC----HHHHHHHHHHTCSSGGGSTT
T ss_pred             CCcC------HHHHHHH-HHcCCC------CCCCcCC----HHHHHHHHHHcccCHHHCCC
Confidence            7432      1222222 222221      1111222    34567777999999 99998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.73  E-value=4.9e-18  Score=134.35  Aligned_cols=140  Identities=13%  Similarity=0.110  Sum_probs=98.3

Q ss_pred             HHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------
Q 048710           51 LINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------  105 (208)
Q Consensus        51 f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------  105 (208)
                      +.+|+.+|.+++           .+.+.+|||||||+||+|.++|++..   .+++.+...++.++              
T Consensus        97 ~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiH  173 (336)
T 4g3f_A           97 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTRRILH  173 (336)
T ss_dssp             CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            357999999998           67788999999999999999998654   58999888888887              


Q ss_pred             ----------CCCC----------c------------cccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ----------LADQ----------T------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------~~~~----------~------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                ..+.          +            ......+||+.|||||++.+..++.++          ||+||+
T Consensus       174 RDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~  253 (336)
T 4g3f_A          174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC  253 (336)
T ss_dssp             SCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc
Confidence                      0000          0            011235799999999999999999988          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||......   .+...+   . .+..+ .  ..+..    .....+.++..+||+.| ++|||+
T Consensus       254 ~Pf~~~~~~---~~~~~i---~-~~~~~-~--~~~~~----~~s~~~~~li~~~L~~dP~~R~sa  304 (336)
T 4g3f_A          254 HPWTQYFRG---PLCLKI---A-SEPPP-I--REIPP----SCAPLTAQAIQEGLRKEPVHRASA  304 (336)
T ss_dssp             CSSTTTCCS---CCHHHH---H-HSCCG-G--GGSCT----TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCHH---HHHHHH---H-cCCCC-c--hhcCc----cCCHHHHHHHHHHccCCHhHCcCH
Confidence            999743221   222111   1 12110 0  11112    22334567777999999 999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.70  E-value=2.4e-17  Score=133.92  Aligned_cols=143  Identities=15%  Similarity=0.215  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.+|.+++           .+.+.+|||||||++|+|.+++...    .+++.+...++.+|          
T Consensus       191 ~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~  266 (423)
T 4fie_A          191 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ  266 (423)
T ss_dssp             SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999998           6778999999999999999999754    48888888787777          


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    ...........+||+.|||||++.+..|+.++          ||+||+.|
T Consensus       267 ~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  346 (423)
T 4fie_A          267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  346 (423)
T ss_dssp             TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                                          01112223467899999999999999999988          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ....+ ..+..+..     +.+..  .......+.++..+||+.| ++|||+
T Consensus       347 F~~~~------~~~~~-~~i~~~~~-----~~~~~--~~~~s~~~~dli~~~L~~dP~~R~ta  395 (423)
T 4fie_A          347 YFNEP------PLKAM-KMIRDNLP-----PRLKN--LHKVSPSLKGFLDRLLVRDPAQRATA  395 (423)
T ss_dssp             TTTSC------HHHHH-HHHHHSCC-----CCCSC--TTSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCcC------HHHHH-HHHHcCCC-----CCCcc--cccCCHHHHHHHHHHcCCChhHCcCH
Confidence            97431      11112 22222211     11111  0111234556777999999 999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.67  E-value=7.2e-17  Score=124.46  Aligned_cols=139  Identities=12%  Similarity=0.203  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.+|.+++           .+.+..|+||||+ +|+|.++|.+..   .++..+...++.++           
T Consensus        57 ~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~  132 (275)
T 3hyh_A           57 QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRHK  132 (275)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999998           7788999999999 689999998654   58888888888777           


Q ss_pred             ----------------------------CCCCccccccccCCcCccCccccccCCCC-cce----------eEecCCCCC
Q 048710          106 ----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFT-EKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ks----------E~~tg~~p~  146 (208)
                                                  ............||+.|||||++.+..+. .++          |++||+.||
T Consensus       133 IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF  212 (275)
T 3hyh_A          133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF  212 (275)
T ss_dssp             CCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCC
Confidence                                        00111223456899999999999988765 566          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ... +.....++..      .+....+    ..+.++..+|++.| ++|||.
T Consensus       213 ~~~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~s~  257 (275)
T 3hyh_A          213 DDES------IPV-LFKNISNGVY------TLPKFLS----PGAAGLIKRMLIVNPLNRISI  257 (275)
T ss_dssp             CCSS------HHH-HHHHHHHTCC------CCCTTSC----HHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCC------HHH-HHHHHHcCCC------CCCCCCC----HHHHHHHHHHccCChhHCcCH
Confidence            7421      222 2222333321      1111222    24456777999999 999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.67  E-value=7.9e-17  Score=126.99  Aligned_cols=158  Identities=23%  Similarity=0.398  Sum_probs=124.3

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i------------  105 (208)
                      .|.+|+.++.+++           .+.+..++||||+++|+|.++++... ....++|..+..++.++            
T Consensus        73 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  152 (326)
T 3uim_A           73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD  152 (326)
T ss_dssp             HHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            6899999999988           66778899999999999999998753 23358999988888766            


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                                      ............||+.|+|||.+.+..++.++          |++||+
T Consensus       153 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  232 (326)
T 3uim_A          153 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ  232 (326)
T ss_dssp             SCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCC
T ss_pred             CCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCC
Confidence                                            00011112334589999999999888888888          999999


Q ss_pred             CCCCCCC--ccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTT--YEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....  ......+..|+........+..+.+..+....+.+....+.+++.+||+.+ .+|||+
T Consensus       233 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  299 (326)
T 3uim_A          233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM  299 (326)
T ss_dssp             CSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred             CcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence            9996321  223445667777666667778888888888888889999999999999999 999996

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.63  E-value=7.3e-16  Score=120.41  Aligned_cols=144  Identities=15%  Similarity=0.158  Sum_probs=90.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------c------------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-----------L------------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIV  102 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~  102 (208)
                      ...+.|.+|+++|.+++           .            ....+|+|||||++|+|.+++.+.......++.....++
T Consensus        45 ~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~  124 (299)
T 4g31_A           45 LAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF  124 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHH
Confidence            34568999999999998           1            122479999999999999999876543346666666666


Q ss_pred             HhC---------------------------------CCCC-------------------ccccccccCCcCccCcccccc
Q 048710          103 VDS---------------------------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQS  130 (208)
Q Consensus       103 ~~i---------------------------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~  130 (208)
                      .++                                 +-+.                   ....+..+||+.|||||++.+
T Consensus       125 ~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~  204 (299)
T 4g31_A          125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG  204 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTT
T ss_pred             HHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC
Confidence            665                                 0000                   011234579999999999999


Q ss_pred             CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcC
Q 048710          131 SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL  200 (208)
Q Consensus       131 ~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~  200 (208)
                      ..++.++          |+++   ||...     ..... ..........+..         ..........+..+||+.
T Consensus       205 ~~y~~~~DiwSlGvilyell~---Pf~~~-----~~~~~-~~~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~  266 (299)
T 4g31_A          205 NSYSHKVDIFSLGLILFELLY---PFSTQ-----MERVR-TLTDVRNLKFPPL---------FTQKYPCEYVMVQDMLSP  266 (299)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHHHH-HHHHHHTTCCCHH---------HHHHCHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHHHHHHHHHcc---CCCCc-----cHHHH-HHHHHhcCCCCCC---------CcccCHHHHHHHHHHcCC
Confidence            9999998          9886   66521     11111 1111222222111         112223445678899999


Q ss_pred             C-CCCCCC
Q 048710          201 N-EKKPTM  207 (208)
Q Consensus       201 ~-~~RPsm  207 (208)
                      + .+|||.
T Consensus       267 dP~~Rps~  274 (299)
T 4g31_A          267 SPMERPEA  274 (299)
T ss_dssp             SGGGSCCH
T ss_pred             ChhHCcCH
Confidence            9 999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.61  E-value=1.5e-16  Score=127.99  Aligned_cols=145  Identities=14%  Similarity=0.275  Sum_probs=98.3

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....++|.+|+.++.+++           .+.+..++||||+++|+|.++++....  .++|.++..++.++        
T Consensus        87 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH  164 (373)
T 2qol_A           87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLS  164 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            445678999999999998           567789999999999999999987543  58999999888887        


Q ss_pred             ----------------CCC-----------------C--ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------LAD-----------------Q--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~~~-----------------~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      ..+                 .  ........+|++|+|||.+.+..++.++          |++
T Consensus       165 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ell  244 (373)
T 2qol_A          165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM  244 (373)
T ss_dssp             HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHH
Confidence                            000                 0  0011122346789999999998899888          988


Q ss_pred             c-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 T-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      | |+.||....      ... +......+.         ....+......+.+++.+||+.+ .+||+|
T Consensus       245 t~g~~P~~~~~------~~~-~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~  297 (373)
T 2qol_A          245 SYGERPYWEMS------NQD-VIKAVDEGY---------RLPPPMDCPAALYQLMLDCWQKDRNNRPKF  297 (373)
T ss_dssp             TTC-CTTTTCC------HHH-HHHHHHTTE---------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hCCCCCCCCCC------HHH-HHHHHHcCC---------CCCCCccccHHHHHHHHHHhCcChhhCcCH
Confidence            8 999987432      111 122222221         11112233446778888999999 999996

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.60  E-value=4.3e-15  Score=115.99  Aligned_cols=158  Identities=18%  Similarity=0.330  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..++||||+++|+|.+++........++|..+..++.++         
T Consensus        72 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  151 (307)
T 2nru_A           72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE  151 (307)
T ss_dssp             THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            34678999999999988           5677899999999999999999864433368999998888877         


Q ss_pred             ------------------------CCC---------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                              +-+         .........||+.|+|||.+.+ .++.++          |++||
T Consensus       152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g  230 (307)
T 2nru_A          152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG  230 (307)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC
Confidence                                    000         0111234568999999998865 466666          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHh-cCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMK-EDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||.......  .+..+...... ...+.+.+++.+ ...+......+.+++..||+.+ .+|||+
T Consensus       231 ~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~  294 (307)
T 2nru_A          231 LPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDI  294 (307)
T ss_dssp             CCSBCTTBSSS--BTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCcccCcchH--HHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCH
Confidence            99998543221  22222222222 123445555554 3455677788899999999999 999996

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.58  E-value=5.2e-16  Score=129.28  Aligned_cols=144  Identities=15%  Similarity=0.260  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|+.+|.+++           ...+..+|||||+++|+|.++|+..... .+++..++.++.++          
T Consensus       259 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~  337 (495)
T 1opk_A          259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKK  337 (495)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4678999999999998           5677899999999999999999865433 58899888888777          


Q ss_pred             -----------------------C--------CCCccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -----------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -----------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                             +        .+.........+|+.|+|||.+.+..++.++          |++| |.
T Consensus       338 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~  417 (495)
T 1opk_A          338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM  417 (495)
T ss_dssp             TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCC
Confidence                                   0        0011112234457899999999988888888          9999 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....   ..+    ......+.         +...+......+.+++.+||+.+ ++||||
T Consensus       418 ~p~~~~~~---~~~----~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  466 (495)
T 1opk_A          418 SPYPGIDL---SQV----YELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDRPSF  466 (495)
T ss_dssp             CSSTTCCG---GGH----HHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCH---HHH----HHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCcChhHCcCH
Confidence            99874321   112    12222221         11112223346678888999999 999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.58  E-value=3.8e-16  Score=123.33  Aligned_cols=146  Identities=14%  Similarity=0.232  Sum_probs=100.8

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....+.|.+|+.++.+++           .+.+..++||||+++|+|.++++....  .+++..+..++.++       
T Consensus        90 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~L  167 (325)
T 3kul_A           90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYL  167 (325)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999998           566788999999999999999976544  58999998888877       


Q ss_pred             --------------------------CCC----------CccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 --------------------------LAD----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 --------------------------~~~----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                +-+          .........+|+.|+|||.+.+..++.++          |+
T Consensus       168 H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  247 (325)
T 3kul_A          168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV  247 (325)
T ss_dssp             HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred             HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHH
Confidence                                      000          01111233457789999999988888888          99


Q ss_pred             ec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +| |..||....      ... +......+..         ...+......+.+++..||+.+ .+|||+
T Consensus       248 l~~g~~p~~~~~------~~~-~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  301 (325)
T 3kul_A          248 LAYGERPYWNMT------NRD-VISSVEEGYR---------LPAPMGCPHALHQLMLDCWHKDRAQRPRF  301 (325)
T ss_dssp             HTTSCCTTTTSC------HHH-HHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HcCCCCCcccCC------HHH-HHHHHHcCCC---------CCCCCCcCHHHHHHHHHHccCChhhCcCH
Confidence            99 999987432      111 1122222211         1111223345678888999999 999996

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.58  E-value=7.2e-16  Score=126.98  Aligned_cols=144  Identities=15%  Similarity=0.272  Sum_probs=99.8

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..+.|.+|+.+|.+++            ...+..++||||+++|+|.++|+..... .+++...+.++.++         
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~  307 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG  307 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTT-TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            4578999999999998            3344799999999999999999875432 47888888888877         


Q ss_pred             ---------------CC---------CC----ccccccccCCcCccCccccccCCCCcce----------eEec-CCCCC
Q 048710          106 ---------------LA---------DQ----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPI  146 (208)
Q Consensus       106 ---------------~~---------~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~  146 (208)
                                     ..         +.    ........+|+.|+|||.+.+..++.++          |++| |+.||
T Consensus       308 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~  387 (450)
T 1k9a_A          308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  387 (450)
T ss_dssp             TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                           00         00    0111233568899999999999999988          9998 99999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....   ....    .....+..         ...+..+...+.+++..||+.+ .+|||+
T Consensus       388 ~~~~~---~~~~----~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~  433 (450)
T 1k9a_A          388 PRIPL---KDVV----PRVEKGYK---------MDAPDGCPPAVYDVMKNCWHLDAATRPTF  433 (450)
T ss_dssp             TTSCT---TTHH----HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCH---HHHH----HHHHcCCC---------CCCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence            74422   1121    22222211         1112223346678888999999 999996

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.57  E-value=3.7e-15  Score=126.03  Aligned_cols=146  Identities=12%  Similarity=0.179  Sum_probs=101.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.+|.+++           .+.+.+|||||||++|+|.++|.+...  .+++.+...++.+|          
T Consensus       197 ~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~  274 (573)
T 3uto_A          197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHEN  274 (573)
T ss_dssp             HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567899999999988           778899999999999999999976543  58888777777766          


Q ss_pred             --------------CC-----------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------LA-----------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------~~-----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                    ..                 +........+||+.|||||++.+..++.++          ||++|..
T Consensus       275 ~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~  354 (573)
T 3uto_A          275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS  354 (573)
T ss_dssp             TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence                          00                 011122356799999999999999999887          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ...... .+..+...  +++......+    ..+.+++..||+.| .+|||.
T Consensus       355 Pf~~~~------~~~~~~-~i~~~~~~--~~~~~~~~~s----~~~~dli~~~L~~dp~~R~t~  405 (573)
T 3uto_A          355 PFGGEN------DDETLR-NVKSCDWN--MDDSAFSGIS----EDGKDFIRKLLLADPNTRMTI  405 (573)
T ss_dssp             SSCCSS------HHHHHH-HHHTTCCC--CCSGGGTTSC----HHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCcC------HHHHHH-HHHhCCCC--CCcccccCCC----HHHHHHHHHHccCChhHCcCH
Confidence            997432      112222 22222110  1111111122    24456777999999 999984

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.57  E-value=7.3e-16  Score=120.69  Aligned_cols=148  Identities=15%  Similarity=0.231  Sum_probs=102.6

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      +....+.|.+|++++.+++           .+.+..++||||+++|+|.+++.....  .++|.++..++.++       
T Consensus        47 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~l  124 (310)
T 3s95_A           47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYL  124 (310)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHH
Confidence            3455678999999999998           667889999999999999999987543  58999999888887       


Q ss_pred             -----------------CCC---------Ccc---------------------ccccccCCcCccCccccccCCCCcce-
Q 048710          106 -----------------LAD---------QTY---------------------MTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       106 -----------------~~~---------~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                                       ..+         ...                     ......||+.|+|||.+.+..++.++ 
T Consensus       125 H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  204 (310)
T 3s95_A          125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD  204 (310)
T ss_dssp             HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHH
T ss_pred             HhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHH
Confidence                             000         000                     00145699999999999999999888 


Q ss_pred             ---------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                               |++||..|+.......... ......         ..+.....    .....+.+++.+||+.+ ++|||+
T Consensus       205 i~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~  270 (310)
T 3s95_A          205 VFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRG---------FLDRYCPP----NCPPSFFPITVRCCDLDPEKRPSF  270 (310)
T ss_dssp             HHHHHHHHHHHHHTCCSSTTTSCBCTTS-SBCHHH---------HHHHTCCT----TCCTTHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHHHHhcCCCCCcchhhhHHHH-hhhhhc---------cccccCCC----CCCHHHHHHHHHHccCChhhCcCH
Confidence                     9999999886432221110 000000         11111111    12234567888999999 999996

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.57  E-value=1.7e-15  Score=121.80  Aligned_cols=146  Identities=14%  Similarity=0.229  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~~  100 (208)
                      .....|.+|+.+|.++ +           ...+..|+||||+++|+|.++|.....             ...++|.....
T Consensus       128 ~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (370)
T 2psq_A          128 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS  207 (370)
T ss_dssp             HHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHH
Confidence            3457899999999999 4           667789999999999999999986431             12478888888


Q ss_pred             HHHhC---------------------------------CCC---------CccccccccCCcCccCccccccCCCCcce-
Q 048710          101 IVVDS---------------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS-  137 (208)
Q Consensus       101 i~~~i---------------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-  137 (208)
                      ++.++                                 +-+         .........||+.|+|||++.+..++.++ 
T Consensus       208 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  287 (370)
T 2psq_A          208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  287 (370)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHH
Confidence            88877                                 000         00112334567899999999998899888 


Q ss_pred             ---------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 ---------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 ---------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                               |++| |..||.....   ..+    ......+..     +    ..+......+.+++..||+.+ ++||+
T Consensus       288 vwslG~il~ellt~g~~p~~~~~~---~~~----~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dP~~Rpt  351 (370)
T 2psq_A          288 VWSFGVLMWEIFTLGGSPYPGIPV---EEL----FKLLKEGHR-----M----DKPANCTNELYMMMRDCWHAVPSQRPT  351 (370)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCG---GGH----HHHHHTTCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH---HHH----HHHHhcCCC-----C----CCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence                     9999 9999874321   111    122222211     1    111223345678888999999 99998


Q ss_pred             C
Q 048710          207 M  207 (208)
Q Consensus       207 m  207 (208)
                      +
T Consensus       352 ~  352 (370)
T 2psq_A          352 F  352 (370)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.57  E-value=8.2e-16  Score=131.14  Aligned_cols=144  Identities=15%  Similarity=0.247  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++|.+|+++|.+++          ...+..++||||+++|+|.++|.....  .+++..+..++.++          
T Consensus       378 ~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~  455 (613)
T 2ozo_A          378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK  455 (613)
T ss_dssp             TTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            35678999999999998          444679999999999999999986543  58999999888887          


Q ss_pred             -----------------------CCC--------Cc--cccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 -----------------------LAD--------QT--YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 -----------------------~~~--------~~--~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                             +-+        ..  .......+|+.|+|||++.+..++.++          |++| 
T Consensus       456 ~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~  535 (613)
T 2ozo_A          456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY  535 (613)
T ss_dssp             TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence                                   000        00  001123356899999999989999988          9998 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||.....   ..    +...+..+...         ..+......+.+++..||+.+ ++||++
T Consensus       536 G~~Pf~~~~~---~~----~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~RPs~  586 (613)
T 2ozo_A          536 GQKPYKKMKG---PE----VMAFIEQGKRM---------ECPPECPPELYALMSDCWIYKWEDRPDF  586 (613)
T ss_dssp             SCCTTTTCCS---HH----HHHHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSTTTSCCH
T ss_pred             CCCCCCCCCH---HH----HHHHHHcCCCC---------CCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence            9999984321   11    22223333211         122233456778889999999 999996

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.56  E-value=1.8e-15  Score=118.68  Aligned_cols=149  Identities=17%  Similarity=0.247  Sum_probs=99.2

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....+.|.+|++++.+++           .+.+..++||||+++|+|.+++........+++..+..++.++       
T Consensus        74 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (309)
T 3p86_A           74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL  153 (309)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999998           6677899999999999999999875432248888888877766       


Q ss_pred             -CCC----------------------------------CccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -LAD----------------------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -~~~----------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                       ..+                                  .........||+.|+|||.+.+..++.++          |++
T Consensus       154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  233 (309)
T 3p86_A          154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA  233 (309)
T ss_dssp             HTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHH
Confidence             000                                  00112345689999999999998888888          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||+.||....      ..............     ..+....    ...+.+++..||+.+ .+|||+
T Consensus       234 tg~~Pf~~~~------~~~~~~~~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dP~~Rps~  286 (309)
T 3p86_A          234 TLQQPWGNLN------PAQVVAAVGFKCKR-----LEIPRNL----NPQVAAIIEGCWTNEPWKRPSF  286 (309)
T ss_dssp             HCCCTTTTSC------HHHHHHHHHHSCCC-----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hCCCCCCCCC------HHHHHHHHHhcCCC-----CCCCccC----CHHHHHHHHHHccCChhhCcCH
Confidence            9999997432      11111111111111     1111122    234667888999999 999986

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.55  E-value=1.4e-15  Score=120.08  Aligned_cols=144  Identities=13%  Similarity=0.265  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++          
T Consensus        59 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~  136 (327)
T 3poz_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             -CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC
Confidence            34568999999999998          334568899999999999999987544  58899888888877          


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                      ............||++|+|||.+.+..++.++          |++| |
T Consensus       137 ~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  216 (327)
T 3poz_A          137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcC
Confidence                                            00111112344568899999999999999888          9999 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....   ..+    ......+..         ...+......+.+++.+||+.+ .+||+|
T Consensus       217 ~~p~~~~~~---~~~----~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  266 (327)
T 3poz_A          217 SKPYDGIPA---SEI----SSILEKGER---------LPQPPICTIDVYMIMVKCWMIDADSRPKF  266 (327)
T ss_dssp             CCTTTTCCG---GGH----HHHHHTTCC---------CCCCTTBCHHHHHHHHHHTCSCGGGSCCH
T ss_pred             CCCccCCCH---HHH----HHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCCCH
Confidence            999974321   112    122222211         1111223345678888999999 999997

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.55  E-value=2.8e-16  Score=129.53  Aligned_cols=144  Identities=13%  Similarity=0.224  Sum_probs=100.5

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+.+|.+++          ...+..++||||+++|+|.++|+..... .+++.....++.++           
T Consensus       226 ~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          226 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4678999999999998          4567789999999999999999864322 47888888777777           


Q ss_pred             ----------------------CCCCc--------cccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ----------------------LADQT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ----------------------~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                            +-+.+        .......+|+.|+|||.+.+..++.++          |++| |+.
T Consensus       305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~  384 (454)
T 1qcf_A          305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI  384 (454)
T ss_dssp             CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCC
Confidence                                  00000        011233457889999999988899888          9999 999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ..+ +......+..         ...+......+.+++.+||+.+ ++||||
T Consensus       385 P~~~~~------~~~-~~~~i~~~~~---------~~~~~~~~~~l~~li~~cl~~dp~~RPt~  432 (454)
T 1qcf_A          385 PYPGMS------NPE-VIRALERGYR---------MPRPENCPEELYNIMMRCWKNRPEERPTF  432 (454)
T ss_dssp             SSTTCC------HHH-HHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCC------HHH-HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCChhHCcCH
Confidence            997432      111 1122222211         1112223346778888999999 999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.54  E-value=6.1e-16  Score=127.48  Aligned_cols=144  Identities=13%  Similarity=0.184  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+.+|.+++          ...+..++||||+++|+|.++|...... .+++.....++.++           
T Consensus       222 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~  300 (452)
T 1fmk_A          222 SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMN  300 (452)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3568999999999998          4447789999999999999999753222 58898888888887           


Q ss_pred             ----------------------CC--------CCccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ----------------------LA--------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ----------------------~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                            +-        +.........+|+.|+|||.+.+..++.++          |++| |+.
T Consensus       301 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~  380 (452)
T 1fmk_A          301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  380 (452)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCC
Confidence                                  00        000111234467899999999988899888          9999 899


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ..+ +......+..         ...+......+.+++.+||+.+ ++|||+
T Consensus       381 P~~~~~------~~~-~~~~i~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~  428 (452)
T 1fmk_A          381 PYPGMV------NRE-VLDQVERGYR---------MPCPPECPESLHDLMCQCWRKEPEERPTF  428 (452)
T ss_dssp             SSTTCC------HHH-HHHHHHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCC------HHH-HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            987432      111 2222222211         1112233446678888999999 999996

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.54  E-value=1.8e-14  Score=113.78  Aligned_cols=155  Identities=14%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ......+.+|+.++.+++            .+.+..|+||||+++|+|.+++....   .+++.....++.++       
T Consensus        46 ~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~L  122 (325)
T 3kn6_A           46 KRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHM  122 (325)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Confidence            344567889999999885            67788999999999999999998753   58898888888877       


Q ss_pred             ------------------CCC------------------CccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ------------------LAD------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ------------------~~~------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                        ..+                  .........||+.|+|||.+.+..++.++          |+
T Consensus       123 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~l  202 (325)
T 3kn6_A          123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM  202 (325)
T ss_dssp             HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence                              000                  01112345579999999999998888888          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +||..||..............+......+...  +++    .........+.+++..||+.+ .+|||++
T Consensus       203 l~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~--~~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~  266 (325)
T 3kn6_A          203 LSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS--FEG----EAWKNVSQEAKDLIQGLLTVDPNKRLKMS  266 (325)
T ss_dssp             HHSSCTTC-------CCCHHHHHHHHTTTCCC--CCS----HHHHTSCHHHHHHHHHHHCCCTTTCCCTT
T ss_pred             HhCCCCCCCCccccccccHHHHHHHHHcCCCC--CCc----ccccCCCHHHHHHHHHHCCCChhHCCCHH
Confidence            99999997532221111122233333333221  000    000122345667888999999 9999974

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.54  E-value=2.5e-15  Score=115.06  Aligned_cols=147  Identities=15%  Similarity=0.175  Sum_probs=100.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cC--CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LE--TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~--~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+.|.+|+.++.+++           .+  .+..++||||+++|+|.+++...... .+++..+..++.++      
T Consensus        48 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~  126 (271)
T 3kmu_A           48 TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAF  126 (271)
T ss_dssp             HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHH
Confidence            445578999999999988           23  37889999999999999999875433 58999988888877      


Q ss_pred             --------------------C-----------CCCccccccccCCcCccCccccccCCCCc---ce----------eEec
Q 048710          106 --------------------L-----------ADQTYMTTQVQGTFGYLDLQYFQSSPFTE---KS----------NLLT  141 (208)
Q Consensus       106 --------------------~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---ks----------E~~t  141 (208)
                                          .           ...........||+.|+|||.+.+...+.   ++          |++|
T Consensus       127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  206 (271)
T 3kmu_A          127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT  206 (271)
T ss_dssp             HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHh
Confidence                                0           00111123456799999999998766555   44          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....      ...........+..     +.+....    ...+.+++..||+.+ ++|||+
T Consensus       207 g~~p~~~~~------~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~li~~~l~~~p~~Rps~  258 (271)
T 3kmu_A          207 REVPFADLS------NMEIGMKVALEGLR-----PTIPPGI----SPHVSKLMKICMNEDPAKRPKF  258 (271)
T ss_dssp             CSCTTTTSC------HHHHHHHHHHSCCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCccccC------hHHHHHHHHhcCCC-----CCCCCCC----CHHHHHHHHHHcCCChhhCcCH
Confidence            999997432      11222222222211     1122222    235667888999999 999986

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.53  E-value=1.6e-15  Score=129.74  Aligned_cols=142  Identities=16%  Similarity=0.222  Sum_probs=99.1

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+.+|.+++          ...+..+|||||+++|+|.++|....   .+++..+..|+.+|           
T Consensus       413 ~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             GHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3578999999999998          45567899999999999999997643   58899988888887           


Q ss_pred             ------------------------------CCCC--ccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 ------------------------------LADQ--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 ------------------------------~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                    ..+.  ........||+.|+|||++.+..++.++          |++| |
T Consensus       490 iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G  569 (635)
T 4fl3_A          490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  569 (635)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                          0000  1112234467889999999998999888          9998 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....       ..+......+...         ..+......+.+++..||+.+ ++||++
T Consensus       570 ~~Pf~~~~~-------~~~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~RPs~  619 (635)
T 4fl3_A          570 QKPYRGMKG-------SEVTAMLEKGERM---------GCPAGCPREMYDLMNLCWTYDVENRPGF  619 (635)
T ss_dssp             CCSSTTCCH-------HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCCCH-------HHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCHhHCcCH
Confidence            999974321       1122233333211         112223356778888999999 999996

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.52  E-value=3.5e-16  Score=125.98  Aligned_cols=144  Identities=13%  Similarity=0.221  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+|.+|+++|.+++           ...+..++||||+++|+|.++++....  .+++.....++.++         
T Consensus       154 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~  231 (377)
T 3cbl_A          154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLES  231 (377)
T ss_dssp             HHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34467999999999998           566789999999999999999986433  48888888888777         


Q ss_pred             ---------------CCCC----------------cccc--ccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 ---------------LADQ----------------TYMT--TQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 ---------------~~~~----------------~~~~--~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                     ..+.                ....  ....+|+.|+|||.+.++.++.++          |++| 
T Consensus       232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~  311 (377)
T 3cbl_A          232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL  311 (377)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhC
Confidence                           0000                0000  112246789999999988888888          9998 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||.....       ..+......+...         ..+...+..+.+++.+||+.+ ++|||+
T Consensus       312 g~~p~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~  362 (377)
T 3cbl_A          312 GASPYPNLSN-------QQTREFVEKGGRL---------PCPELCPDAVFRLMEQCWAYEPGQRPSF  362 (377)
T ss_dssp             SCCSSTTSCH-------HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCCCH-------HHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            9999874321       1122222222111         112223345678888999999 999996

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.52  E-value=2.9e-14  Score=111.11  Aligned_cols=143  Identities=14%  Similarity=0.245  Sum_probs=100.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           ...+..++||||+++|+|.+++.+.    .+++.....++.++          
T Consensus        60 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~  135 (297)
T 3fxz_A           60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN  135 (297)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3567899999999988           5678899999999999999999864    47888888887777          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||.+.+..++.++          |++||..|
T Consensus       136 ~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  215 (297)
T 3fxz_A          136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (297)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                                   0       0011122345789999999999999898888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ...........+.. ..       ..+......+.+++.+||+.+ .+|||+
T Consensus       216 f~~~~------~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~  264 (297)
T 3fxz_A          216 YLNEN------PLRALYLIATNGTP-EL-------QNPEKLSAIFRDFLNRCLEMDVEKRGSA  264 (297)
T ss_dssp             TTTSC------HHHHHHHHHHHCSC-CC-------SCGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCC------HHHHHHHHHhCCCC-CC-------CCccccCHHHHHHHHHHccCChhHCcCH
Confidence            97431      11112222212111 11       111122334667888999999 999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.52  E-value=1.6e-14  Score=112.36  Aligned_cols=147  Identities=19%  Similarity=0.248  Sum_probs=98.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++        
T Consensus        52 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH  128 (294)
T 4eqm_A           52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAH  128 (294)
T ss_dssp             HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            344578999999999988           67788999999999999999998653   58899888888877        


Q ss_pred             -------------------------CCC--------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 -------------------------LAD--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------------~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                               +-+        .........||+.|+|||.+.+..++.++          |++||
T Consensus       129 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g  208 (294)
T 4eqm_A          129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG  208 (294)
T ss_dssp             HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence                                     000        00112235689999999999998888887          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +.||....      ........... ..+.. ...+..    ..+..+.++..+||+.+ .+||+
T Consensus       209 ~~pf~~~~------~~~~~~~~~~~-~~~~~-~~~~~~----~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          209 EPPFNGET------AVSIAIKHIQD-SVPNV-TTDVRK----DIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             SCSSCSSC------HHHHHHHHHSS-CCCCH-HHHSCT----TSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             CCCCCCCC------hHHHHHHHhhc-cCCCc-chhccc----CCCHHHHHHHHHHhcCCHhHccc
Confidence            99997432      11112222221 11111 111112    22345667888999999 99994

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=4.7e-15  Score=117.44  Aligned_cols=145  Identities=14%  Similarity=0.271  Sum_probs=99.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ......|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .+++.....++.++        
T Consensus        87 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH  164 (333)
T 1mqb_A           87 EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLA  164 (333)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999988           567789999999999999999986543  58899988888877        


Q ss_pred             ----------------CCC---------C----------ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 ----------------LAD---------Q----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 ----------------~~~---------~----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                      ..+         .          ........+|+.|+|||.+.+..++.++          |++
T Consensus       165 ~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  244 (333)
T 1mqb_A          165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM  244 (333)
T ss_dssp             HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHH
T ss_pred             hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHH
Confidence                            000         0          0011223457789999999988888888          999


Q ss_pred             c-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 T-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      | |+.||....      ... +......+...         ..+......+.+++.+||+.+ ++||++
T Consensus       245 t~g~~pf~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~  297 (333)
T 1mqb_A          245 TYGERPYWELS------NHE-VMKAINDGFRL---------PTPMDCPSAIYQLMMQCWQQERARRPKF  297 (333)
T ss_dssp             TTSCCTTTTCC------HHH-HHHHHHTTCCC---------CCCTTCBHHHHHHHHHHTCSSTTTSCCH
T ss_pred             cCCCCCcccCC------HHH-HHHHHHCCCcC---------CCcccCCHHHHHHHHHHcCCChhhCcCH
Confidence            8 999987432      111 22222222110         111122345678888999999 999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.51  E-value=5.2e-15  Score=117.21  Aligned_cols=146  Identities=10%  Similarity=0.197  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC---------------------CCCC
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE---------------------EFPI   93 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~---------------------~~~l   93 (208)
                      .....|.+|+.++.+++           .+.+..++||||+++|+|.+++.....                     ...+
T Consensus        92 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  171 (343)
T 1luf_A           92 DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL  171 (343)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence            34578999999999988           567889999999999999999986421                     1368


Q ss_pred             CHHHHHHHHHhC---------------------------------CCC---------CccccccccCCcCccCccccccC
Q 048710           94 AWEMQLHIVVDS---------------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSS  131 (208)
Q Consensus        94 ~~~~r~~i~~~i---------------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~  131 (208)
                      ++.++..++.++                                 +-+         .........||+.|+|||.+.+.
T Consensus       172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  251 (343)
T 1luf_A          172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  251 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccC
Confidence            999998888887                                 000         00112244578899999999988


Q ss_pred             CCCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcC
Q 048710          132 PFTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL  200 (208)
Q Consensus       132 ~~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~  200 (208)
                      .++.++          |++| |..||....      . ..+......+....     +    +......+.+++.+||+.
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~------~-~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~  315 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMA------H-EEVIYYVRDGNILA-----C----PENCPLELYNLMRLCWSK  315 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------H-HHHHHHHHTTCCCC-----C----CTTCCHHHHHHHHHHTCS
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCC------h-HHHHHHHhCCCcCC-----C----CCCCCHHHHHHHHHHccc
Confidence            888888          9999 999987432      1 11222233332211     1    112233567788899999


Q ss_pred             C-CCCCCC
Q 048710          201 N-EKKPTM  207 (208)
Q Consensus       201 ~-~~RPsm  207 (208)
                      + ++|||+
T Consensus       316 ~p~~Rps~  323 (343)
T 1luf_A          316 LPADRPSF  323 (343)
T ss_dssp             SGGGSCCH
T ss_pred             CcccCCCH
Confidence            9 999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.51  E-value=2.6e-14  Score=111.85  Aligned_cols=148  Identities=19%  Similarity=0.275  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHhhcc---------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           46 GKVNKLINEVVILSQIN---------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~---------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.|.+|++++.+++         ...+..++||||+++|+|.+++........+++...+.++.++           
T Consensus        43 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  122 (307)
T 2eva_A           43 SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ  122 (307)
T ss_dssp             THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34578999999999988         3335689999999999999999876543346777777666554           


Q ss_pred             ----------------CCCCc--------------cccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ----------------LADQT--------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                      ..+..              .......||..|+|||.+.+..++.++          |++||+.|
T Consensus       123 ~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  202 (307)
T 2eva_A          123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP  202 (307)
T ss_dssp             SSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCT
T ss_pred             CCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                            00000              011234589999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....    ....... ....+...     .+....    ...+.+++.+||+.+ .+|||+
T Consensus       203 ~~~~~~----~~~~~~~-~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~  251 (307)
T 2eva_A          203 FDEIGG----PAFRIMW-AVHNGTRP-----PLIKNL----PKPIESLMTRCWSKDPSQRPSM  251 (307)
T ss_dssp             TTTTCS----SHHHHHH-HHHTTCCC-----CCBTTC----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             chhhCc----cHHHHHH-HHhcCCCC-----Cccccc----CHHHHHHHHHHhcCChhhCcCH
Confidence            974321    1111111 11122111     111122    234667888999999 999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.51  E-value=1.3e-13  Score=111.59  Aligned_cols=99  Identities=16%  Similarity=0.219  Sum_probs=75.5

Q ss_pred             hhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+.+.+|+++|.+++                 .+.+.+|||||||+ |+|.++|.+..   .+++.+...++.++   
T Consensus        95 ~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~a  170 (398)
T 4b99_A           95 TNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRG  170 (398)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHH
Confidence            44567899999999998                 13467899999996 78999998654   58888887777777   


Q ss_pred             ------------------------------CCC-----------CccccccccCCcCccCccccccC-CCCcce------
Q 048710          106 ------------------------------LAD-----------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS------  137 (208)
Q Consensus       106 ------------------------------~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks------  137 (208)
                                                    +-+           ........+||+.|||||++.+. .++.++      
T Consensus       171 l~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG  250 (398)
T 4b99_A          171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG  250 (398)
T ss_dssp             HHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             HHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence                                          000           01123456899999999998875 457776      


Q ss_pred             ----eEecCCCCCCC
Q 048710          138 ----NLLTKEKPICL  148 (208)
Q Consensus       138 ----E~~tg~~p~~~  148 (208)
                          ||+||+.||..
T Consensus       251 ~il~ell~G~~pF~g  265 (398)
T 4b99_A          251 CIFGEMLARRQLFPG  265 (398)
T ss_dssp             HHHHHHHHTSCSSCC
T ss_pred             HHHHHHHHCCCCCCC
Confidence                99999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.51  E-value=6e-15  Score=114.07  Aligned_cols=146  Identities=15%  Similarity=0.255  Sum_probs=101.0

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+.++.+++           .+.+..++||||+++|+|.+++...... .+++..+..++.++        
T Consensus        50 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH  128 (288)
T 3kfa_A           50 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE  128 (288)
T ss_dssp             STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTT-TSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccC-CccHhHHHHHHHHHHHHHHHHH
Confidence            345678999999999998           6677899999999999999999875433 68899888887777        


Q ss_pred             ---------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 ---------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 ---------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                                       ..+.........||+.|+|||.+.+..++.++          |++| 
T Consensus       129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~  208 (288)
T 3kfa_A          129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY  208 (288)
T ss_dssp             HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence                                             00011112234467789999999988888888          9999 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||.....   ....    .....+.     .    ...+......+.+++..||+.+ .+|||+
T Consensus       209 g~~p~~~~~~---~~~~----~~~~~~~-----~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~  259 (288)
T 3kfa_A          209 GMSPYPGIDL---SQVY----ELLEKDY-----R----MERPEGCPEKVYELMRACWQWNPSDRPSF  259 (288)
T ss_dssp             SCCSSTTCCG---GGHH----HHHHTTC-----C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCCCH---HHHH----HHHhccC-----C----CCCCCCCCHHHHHHHHHHhCCChhhCcCH
Confidence            9999874321   1111    1121111     0    1111122345677888999999 999986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.50  E-value=4.1e-15  Score=114.09  Aligned_cols=143  Identities=17%  Similarity=0.260  Sum_probs=99.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|++++.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        48 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~  125 (269)
T 4hcu_A           48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA  125 (269)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467999999999998           667789999999999999999986544  58888888888777          


Q ss_pred             -----------------------CCCC--------ccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -----------------------LADQ--------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -----------------------~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                             +-+.        ........||+.|+|||.+.+..++.++          |++| |+
T Consensus       126 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~  205 (269)
T 4hcu_A          126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK  205 (269)
T ss_dssp             TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCC
Confidence                                   0000        0112234467789999999988888888          9999 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+..     +..    +......+.+++..||+.+ .+|||+
T Consensus       206 ~p~~~~~------~~~-~~~~~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~  254 (269)
T 4hcu_A          206 IPYENRS------NSE-VVEDISTGFR-----LYK----PRLASTHVYQIMNHCWRERPEDRPAF  254 (269)
T ss_dssp             CTTTTCC------HHH-HHHHHHTTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCC------HHH-HHHHHhcCcc-----CCC----CCcCCHHHHHHHHHHccCCcccCcCH
Confidence            9987432      111 1222222210     111    1111234667888999999 999986

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.50  E-value=5.6e-15  Score=114.77  Aligned_cols=152  Identities=16%  Similarity=0.209  Sum_probs=99.1

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+.|.+|+.++.+++             .+....++||||+++|+|.+++.....  .+++.....++.++      
T Consensus        52 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~  129 (295)
T 3ugc_A           52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEY  129 (295)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHH
Confidence            344578999999999998             223558999999999999999987543  48888888888877      


Q ss_pred             ---------------------------CCCCc----------cccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 ---------------------------LADQT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 ---------------------------~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                 +-+.+          .......||..|+|||.+.+..++.++          |
T Consensus       130 lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  209 (295)
T 3ugc_A          130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  209 (295)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHH
Confidence                                       00000          111233467789999999988898888          9


Q ss_pred             EecCCCCCCCCCcc---------CCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYE---------ENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||..|+......         ........+......+.         ....+......+.+++..||+.+ ++|||+
T Consensus       210 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  279 (295)
T 3ugc_A          210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSF  279 (295)
T ss_dssp             HHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCH
Confidence            99999987632100         00000111111121111         11112233456778888999999 999996

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.50  E-value=4.9e-14  Score=111.04  Aligned_cols=143  Identities=15%  Similarity=0.206  Sum_probs=100.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           ...+..++||||+++|+|.+++.+.    .++|..+..++.++          
T Consensus        85 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~  160 (321)
T 2c30_A           85 RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ  160 (321)
T ss_dssp             SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567999999999988           5678899999999999999999753    58899998888887          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       161 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  240 (321)
T 2c30_A          161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP  240 (321)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                                   0       0011112345789999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ...... .......     +.+..  +......+.+++.+||+.+ .+|||+
T Consensus       241 f~~~~------~~~~~~-~~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~  289 (321)
T 2c30_A          241 YFSDS------PVQAMK-RLRDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATA  289 (321)
T ss_dssp             TTTSC------HHHHHH-HHHHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCC------HHHHHH-HHhcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCH
Confidence            97431      111111 2222211     11110  1112234567777999999 999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.50  E-value=2e-14  Score=113.18  Aligned_cols=153  Identities=12%  Similarity=0.114  Sum_probs=97.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------c----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           47 KVNKLINEVVILSQIN-----------L----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+..|+.++.+++           .    .....++||||+++|+|.+++...    .++|..+..++.++      
T Consensus        61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~  136 (322)
T 3soc_A           61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAY  136 (322)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHH
Confidence            3456677999999887           1    134579999999999999999764    48899888887766      


Q ss_pred             --CC--------------------------------------------CCccccccccCCcCccCccccccC-----CCC
Q 048710          106 --LA--------------------------------------------DQTYMTTQVQGTFGYLDLQYFQSS-----PFT  134 (208)
Q Consensus       106 --~~--------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~-----~~~  134 (208)
                        ..                                            ..........||+.|+|||.+.+.     .++
T Consensus       137 LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  216 (322)
T 3soc_A          137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF  216 (322)
T ss_dssp             HTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHH
T ss_pred             HHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCC
Confidence              00                                            001112235689999999999763     444


Q ss_pred             cce----------eEecCCCCCCCCCccCCccHHH---------HHHHHHhcCcccccccccccccC-cHHHHHHHHHHH
Q 048710          135 EKS----------NLLTKEKPICLTTYEENKSLTT---------YFLRAMKEDRLFEIFDGLVLKEG-GKDEIVVVVKLK  194 (208)
Q Consensus       135 ~ks----------E~~tg~~p~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~l~  194 (208)
                      .++          |++||+.||..........+..         .+........    ..+.+.... +......+.+++
T Consensus       217 ~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li  292 (322)
T 3soc_A          217 LRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKK----KRPVLRDYWQKHAGMAMLCETI  292 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhccc----CCCCccccccccchHHHHHHHH
Confidence            444          9999999997543222211111         1111111111    122222111 134566788899


Q ss_pred             HHhhcCC-CCCCCC
Q 048710          195 KRCLNLN-EKKPTM  207 (208)
Q Consensus       195 ~~C~~~~-~~RPsm  207 (208)
                      .+||+.+ ++|||+
T Consensus       293 ~~cl~~dP~~Rps~  306 (322)
T 3soc_A          293 EECWDHDAEARLSA  306 (322)
T ss_dssp             HHHTCSSGGGSCCH
T ss_pred             HHHccCChhhCcCH
Confidence            9999999 999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.50  E-value=8.3e-15  Score=118.11  Aligned_cols=147  Identities=15%  Similarity=0.211  Sum_probs=102.4

Q ss_pred             hhhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHH
Q 048710           45 EGKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQL   99 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~   99 (208)
                      ......|.+|++++.++ +           ...+..++||||+++|+|.+++.....             ...+++..+.
T Consensus       115 ~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  194 (382)
T 3tt0_A          115 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV  194 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHH
Confidence            34457899999999998 4           667789999999999999999986431             1258999999


Q ss_pred             HHHHhC---------------------------------CCC---------CccccccccCCcCccCccccccCCCCcce
Q 048710          100 HIVVDS---------------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       100 ~i~~~i---------------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .++.++                                 +-+         .........||+.|+|||.+.+..++.++
T Consensus       195 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  274 (382)
T 3tt0_A          195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS  274 (382)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchh
Confidence            888887                                 000         01122344568899999999998889888


Q ss_pred             ----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          138 ----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       138 ----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                                |++| |..||....      . ..+......+...     .....    ....+.+++..||+.+ ++||
T Consensus       275 DiwslG~il~ellt~g~~p~~~~~------~-~~~~~~~~~~~~~-----~~~~~----~~~~l~~li~~~l~~dP~~Rp  338 (382)
T 3tt0_A          275 DVWSFGVLLWEIFTLGGSPYPGVP------V-EELFKLLKEGHRM-----DKPSN----CTNELYMMMRDCWHAVPSQRP  338 (382)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCC------H-HHHHHHHHTTCCC-----CCCSS----CCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCC------H-HHHHHHHHcCCCC-----CCCcc----CCHHHHHHHHHHcCCChhhCc
Confidence                      9999 999987432      1 1122233232211     11112    2335677888999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       339 s~  340 (382)
T 3tt0_A          339 TF  340 (382)
T ss_dssp             CH
T ss_pred             CH
Confidence            96

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=5e-15  Score=114.66  Aligned_cols=145  Identities=14%  Similarity=0.248  Sum_probs=101.0

Q ss_pred             hhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           45 EGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.|.+|++++.+++          ...+..++|+||+++|+|.+++.+...  .+++.....++.++         
T Consensus        51 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~  128 (287)
T 1u59_A           51 KADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE  128 (287)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999998          455678999999999999999976443  58999998888887         


Q ss_pred             ------------------------CC--------CCc--cccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ------------------------LA--------DQT--YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ------------------------~~--------~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                              +-        ...  .......||+.|+|||.+.+..++.++          |++|
T Consensus       129 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  208 (287)
T 1u59_A          129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS  208 (287)
T ss_dssp             TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHc
Confidence                                    00        000  011233467899999999888888887          9999


Q ss_pred             -CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 -KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 -g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |+.||.....   ..    +......+...     .+    +......+.+++..||+.+ .+||++
T Consensus       209 ~g~~p~~~~~~---~~----~~~~i~~~~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~  260 (287)
T 1u59_A          209 YGQKPYKKMKG---PE----VMAFIEQGKRM-----EC----PPECPPELYALMSDCWIYKWEDRPDF  260 (287)
T ss_dssp             TSCCTTTTCCT---HH----HHHHHHTTCCC-----CC----CTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             CCCCCcccCCH---HH----HHHHHhcCCcC-----CC----CCCcCHHHHHHHHHHcCCChhhCcCH
Confidence             9999974321   11    11222222211     11    1222345677888999999 999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=5.7e-15  Score=117.14  Aligned_cols=146  Identities=13%  Similarity=0.252  Sum_probs=99.4

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCC--------------------CCCC
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEE--------------------FPIA   94 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~--------------------~~l~   94 (208)
                      ....|.+|+.++.++ +           ...+..++||||+++|+|.+++......                    ..++
T Consensus        91 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  170 (344)
T 1rjb_A           91 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT  170 (344)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CC
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCC
Confidence            346799999999999 4           6677899999999999999999865321                    1378


Q ss_pred             HHHHHHHHHhC---------------------------------CC--------C-CccccccccCCcCccCccccccCC
Q 048710           95 WEMQLHIVVDS---------------------------------LA--------D-QTYMTTQVQGTFGYLDLQYFQSSP  132 (208)
Q Consensus        95 ~~~r~~i~~~i---------------------------------~~--------~-~~~~~~~~~gt~~y~aPE~~~~~~  132 (208)
                      |..+..++.++                                 +-        + .........||+.|+|||.+.+..
T Consensus       171 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  250 (344)
T 1rjb_A          171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  250 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC
Confidence            88888888887                                 00        0 001122345678999999998888


Q ss_pred             CCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC
Q 048710          133 FTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN  201 (208)
Q Consensus       133 ~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~  201 (208)
                      ++.++          |++| |..||......      ..+......+..     +    ..+......+.+++.+||+.+
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVD------ANFYKLIQNGFK-----M----DQPFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHTTCC-----C----CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCCcH------HHHHHHHhcCCC-----C----CCCCCCCHHHHHHHHHHcCCC
Confidence            88888          9998 99999743211      112222222211     1    111122345677888999999


Q ss_pred             -CCCCCC
Q 048710          202 -EKKPTM  207 (208)
Q Consensus       202 -~~RPsm  207 (208)
                       .+|||+
T Consensus       316 p~~Rps~  322 (344)
T 1rjb_A          316 SRKRPSF  322 (344)
T ss_dssp             GGGSCCH
T ss_pred             chhCcCH
Confidence             999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.50  E-value=4.1e-15  Score=119.34  Aligned_cols=148  Identities=16%  Similarity=0.230  Sum_probs=102.0

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC----CCCCCCHHHHHHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN----EEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~----~~~~l~~~~r~~i~~~i---  105 (208)
                      ......+|.+|+.++.+++           ...+..++||||+++|+|.+++....    ....+++...+.++.++   
T Consensus       114 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  193 (367)
T 3l9p_A          114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  193 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHH
Confidence            3445568999999999988           56777899999999999999998643    11258898888888877   


Q ss_pred             ---------------------CC-CC--------------------ccccccccCCcCccCccccccCCCCcce------
Q 048710          106 ---------------------LA-DQ--------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       106 ---------------------~~-~~--------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                                           .. +.                    ........||+.|+|||.+.+..++.++      
T Consensus       194 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG  273 (367)
T 3l9p_A          194 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG  273 (367)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHH
Confidence                                 10 00                    0111234568899999999988899888      


Q ss_pred             ----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |++| |..||....      ... +......+...         ..+......+.+++..||+.+ .+|||+
T Consensus       274 ~il~ellt~g~~pf~~~~------~~~-~~~~i~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~  333 (367)
T 3l9p_A          274 VLLWEIFSLGYMPYPSKS------NQE-VLEFVTSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNF  333 (367)
T ss_dssp             HHHHHHHTTSCCSSTTCC------HHH-HHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHhCCCCCCCCCC------HHH-HHHHHHcCCCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCH
Confidence                9998 999987432      111 22222222211         111122335678888999999 999996

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.49  E-value=2.3e-14  Score=111.09  Aligned_cols=151  Identities=15%  Similarity=0.245  Sum_probs=98.4

Q ss_pred             chhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           44 YEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....+.|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++        
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH  137 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLH  137 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999998          566778999999999999999976543  58899888888877        


Q ss_pred             -------------------------CC---------CCccccccccCCcCccCccccc---cCCCCcce----------e
Q 048710          106 -------------------------LA---------DQTYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------~~---------~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E  138 (208)
                                               +-         ..........||+.|+|||.+.   +..++.++          |
T Consensus       138 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  217 (289)
T 3og7_A          138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE  217 (289)
T ss_dssp             HTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHH
T ss_pred             hCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHH
Confidence                                     00         0011123456899999999986   55666666          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||.....      ...+......+....... .+.    ......+.+++..||+.+ ++|||+
T Consensus       218 l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~-~~~----~~~~~~l~~li~~~l~~~p~~Rps~  276 (289)
T 3og7_A          218 LMTGQLPYSNINN------RDQIIEMVGRGSLSPDLS-KVR----SNCPKRMKRLMAECLKKKRDERPSF  276 (289)
T ss_dssp             HHHSSCTTSSCCC------HHHHHHHHHHTSCCCCTT-SSC----TTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHCCCCccccch------HHHHHHHhcccccCcchh-hcc----ccCCHHHHHHHHHHccCChhhCCCH
Confidence            9999999974321      122222333332211111 111    122346678888999999 999986

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.49  E-value=8.5e-15  Score=116.74  Aligned_cols=147  Identities=14%  Similarity=0.189  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCC-----------------------
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNE-----------------------   89 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-----------------------   89 (208)
                      ...+.|.+|++++.++.             ...+..++||||+++|+|.++++....                       
T Consensus        67 ~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (359)
T 3vhe_A           67 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP  146 (359)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------
T ss_pred             HHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccc
Confidence            34567999999999994             334558999999999999999986532                       


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHhC------------------------
Q 048710           90 ----------------------------------------EFPIAWEMQLHIVVDS------------------------  105 (208)
Q Consensus        90 ----------------------------------------~~~l~~~~r~~i~~~i------------------------  105 (208)
                                                              ...+++.....++.++                        
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll  226 (359)
T 3vhe_A          147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  226 (359)
T ss_dssp             -------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             hhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE
Confidence                                                    1127888888888877                        


Q ss_pred             ---------C---------CCCccccccccCCcCccCccccccCCCCcce----------eEec-CCCCCCCCCccCCcc
Q 048710          106 ---------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPICLTTYEENKS  156 (208)
Q Consensus       106 ---------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~~~~~~~~~~~  156 (208)
                               +         ...........||+.|+|||.+.+..++.++          |++| |..||......    
T Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----  302 (359)
T 3vhe_A          227 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----  302 (359)
T ss_dssp             CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----
T ss_pred             cCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh----
Confidence                     0         0011122345678899999999988888888          9998 99998743211    


Q ss_pred             HHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          157 LTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       157 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        ..+......+...     ......    ...+.+++..||+.+ .+|||+
T Consensus       303 --~~~~~~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dP~~Rps~  343 (359)
T 3vhe_A          303 --EEFCRRLKEGTRM-----RAPDYT----TPEMYQTMLDCWHGEPSQRPTF  343 (359)
T ss_dssp             --HHHHHHHHHTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             --HHHHHHHHcCCCC-----CCCCCC----CHHHHHHHHHHccCChhhCCCH
Confidence              1122222222111     111112    234677888999999 999996

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.49  E-value=3.8e-14  Score=120.75  Aligned_cols=128  Identities=11%  Similarity=0.109  Sum_probs=85.3

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------------------------------CCC-
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------------------------------LAD-  108 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------------------------------~~~-  108 (208)
                      .+.+.+|||||||+||+|.++|.+..   .++......++.+|                                 +-+ 
T Consensus       262 ~~~~~lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          262 HTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EECCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccce
Confidence            78889999999999999999998654   47777766666666                                 000 


Q ss_pred             ----CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccc
Q 048710          109 ----QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI  173 (208)
Q Consensus       109 ----~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  173 (208)
                          ......+.+||+.|||||++.+ ..|+.++          ||+||..||.....   ..... +........+   
T Consensus       339 A~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~---~~~~~-i~~~i~~~~~---  411 (689)
T 3v5w_A          339 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHE-IDRMTLTMAV---  411 (689)
T ss_dssp             CEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC---CCHHH-HHHHHHHCCC---
T ss_pred             eeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHH-HHHhhcCCCC---
Confidence                1112345789999999999975 5788887          99999999974221   11211 2222222211   


Q ss_pred             ccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          174 FDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       174 ~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         .++...+    ..+.++...|++.| .+|++.
T Consensus       412 ---~~p~~~S----~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          412 ---ELPDSFS----PELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             ---CCCTTSC----HHHHHHHHHHTCSCGGGCTTC
T ss_pred             ---CCCccCC----HHHHHHHHHHccCCHhHCCCC
Confidence               1111222    23456777999999 999973

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.49  E-value=7.9e-15  Score=113.20  Aligned_cols=144  Identities=10%  Similarity=0.214  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.|.+|+.++.+++          ...+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~  135 (281)
T 1mp8_A           58 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESK  135 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34568999999999988          456778999999999999999986543  58898888888777          


Q ss_pred             -----------------------C--------CCCccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -----------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -----------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                             +        ...........+|+.|+|||.+.+..++.++          |++| |.
T Consensus       136 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~  215 (281)
T 1mp8_A          136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV  215 (281)
T ss_dssp             TCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             CeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCC
Confidence                                   0        0001111234467889999999888888887          8986 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....   .....    ....+...     .+    +......+.+++..||+.+ ++|||+
T Consensus       216 ~pf~~~~~---~~~~~----~i~~~~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~  264 (281)
T 1mp8_A          216 KPFQGVKN---NDVIG----RIENGERL-----PM----PPNCPPTLYSLMTKCWAYDPSRRPRF  264 (281)
T ss_dssp             CTTTTCCG---GGHHH----HHHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCcCCH---HHHHH----HHHcCCCC-----CC----CCCCCHHHHHHHHHHccCChhhCcCH
Confidence            99874321   11211    12222111     11    1122345667888999999 999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.49  E-value=1.5e-15  Score=127.56  Aligned_cols=144  Identities=13%  Similarity=0.177  Sum_probs=100.4

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+++|.+++          ...+..+|||||+++|+|.++|+..... .+++...+.|+.++           
T Consensus       305 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~  383 (535)
T 2h8h_A          305 SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMN  383 (535)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3568999999999998          4457789999999999999999753222 58899888888887           


Q ss_pred             ----------------------CCCCc--------cccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ----------------------LADQT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ----------------------~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                            +-+..        .......+|..|+|||.+.+..++.++          |++| |+.
T Consensus       384 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~  463 (535)
T 2h8h_A          384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  463 (535)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCC
T ss_pred             eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                                  00000        011234467899999999988899888          9999 899


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ..+ +......+..         ...+......+.+++.+||+.+ ++|||+
T Consensus       464 P~~~~~------~~~-~~~~i~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~  511 (535)
T 2h8h_A          464 PYPGMV------NRE-VLDQVERGYR---------MPCPPECPESLHDLMCQCWRKEPEERPTF  511 (535)
T ss_dssp             SSTTCC------HHH-HHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCC------HHH-HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            987432      111 2222222211         1112223345678888999999 999996

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.49  E-value=8.7e-14  Score=116.83  Aligned_cols=147  Identities=13%  Similarity=0.102  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-CCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE-EFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.+|++++.+++           .+.+..|+||||+++|+|.++|.+... ...+++.....++.++          
T Consensus       229 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~  308 (543)
T 3c4z_A          229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR  308 (543)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence            467899999999988           677889999999999999999986431 2258888887777766          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||++.+..++.++          |++||+.|
T Consensus       309 gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~P  388 (543)
T 3c4z_A          309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP  388 (543)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCC
Confidence                                   0       0011112345899999999999998888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....  ...... +......+..          ..+......+.+++..||+.+ .+||++
T Consensus       389 F~~~~~--~~~~~~-~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          389 FRARGE--KVENKE-LKQRVLEQAV----------TYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             SCCTTC--CCCHHH-HHHHHHHCCC----------CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CCCCcc--chhHHH-HHHHHhhccc----------CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            974321  111222 2222222211          111112234567777999999 999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.49  E-value=9.2e-15  Score=114.33  Aligned_cols=147  Identities=16%  Similarity=0.247  Sum_probs=101.4

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC---------------------CCC
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE---------------------EFP   92 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~---------------------~~~   92 (208)
                      ....+.|.+|+.++.+++           ...+..++||||+++|+|.+++.....                     ...
T Consensus        67 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (314)
T 2ivs_A           67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA  146 (314)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CE
T ss_pred             HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccC
Confidence            345578999999999998           667789999999999999999986432                     113


Q ss_pred             CCHHHHHHHHHhC---------------------------------CC---------CCccccccccCCcCccCcccccc
Q 048710           93 IAWEMQLHIVVDS---------------------------------LA---------DQTYMTTQVQGTFGYLDLQYFQS  130 (208)
Q Consensus        93 l~~~~r~~i~~~i---------------------------------~~---------~~~~~~~~~~gt~~y~aPE~~~~  130 (208)
                      +++.....++.++                                 +-         ..........||+.|+|||.+.+
T Consensus       147 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  226 (314)
T 2ivs_A          147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD  226 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC
Confidence            7888888888877                                 00         00111223456788999999988


Q ss_pred             CCCCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhc
Q 048710          131 SPFTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLN  199 (208)
Q Consensus       131 ~~~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~  199 (208)
                      ..++.++          |++| |..||.....   ..+    ......+...     ..    +......+.+++.+||+
T Consensus       227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~----~~~~~~~~~~-----~~----~~~~~~~~~~li~~~l~  290 (314)
T 2ivs_A          227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP---ERL----FNLLKTGHRM-----ER----PDNCSEEMYRLMLQCWK  290 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---GGH----HHHHHTTCCC-----CC----CTTCCHHHHHHHHHHTC
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHH----HHHhhcCCcC-----CC----CccCCHHHHHHHHHHcc
Confidence            8888888          9999 9999874321   112    2222222111     11    11223456778889999


Q ss_pred             CC-CCCCCC
Q 048710          200 LN-EKKPTM  207 (208)
Q Consensus       200 ~~-~~RPsm  207 (208)
                      .+ ++|||+
T Consensus       291 ~dp~~Rps~  299 (314)
T 2ivs_A          291 QEPDKRPVF  299 (314)
T ss_dssp             SSGGGSCCH
T ss_pred             CChhhCcCH
Confidence            99 999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=6.4e-15  Score=118.55  Aligned_cols=144  Identities=17%  Similarity=0.266  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+|.+|+.++.+++            ...+..++||||+++|+|.+++.+...  .+++.....++.++        
T Consensus       132 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH  209 (373)
T 3c1x_A          132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLA  209 (373)
T ss_dssp             HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999988            345678999999999999999986544  57888888777776        


Q ss_pred             ----------------CC---------C-----------CccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ----------------LA---------D-----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ----------------~~---------~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                      ..         +           .........||+.|+|||.+.+..++.++          |+
T Consensus       210 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el  289 (373)
T 3c1x_A          210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL  289 (373)
T ss_dssp             HTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             HCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                            00         0           00111234567889999999998999888          99


Q ss_pred             ec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +| |..||....   ......    ....+...  ..       +......+.+++.+||+.+ ++|||+
T Consensus       290 lt~~~~p~~~~~---~~~~~~----~~~~~~~~--~~-------p~~~~~~l~~li~~cl~~dp~~RPs~  343 (373)
T 3c1x_A          290 MTRGAPPYPDVN---TFDITV----YLLQGRRL--LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSF  343 (373)
T ss_dssp             HTTSCCSCTTSC---SSCHHH----HHHTTCCC--CC-------CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HhCcCCCCCCCC---HHHHHH----HHHcCCCC--CC-------CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            99 677776332   112222    12222110  01       1122345678888999999 999986

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.48  E-value=6.3e-14  Score=110.83  Aligned_cols=143  Identities=20%  Similarity=0.200  Sum_probs=99.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.+.+|+++|.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++        
T Consensus        55 ~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH  131 (328)
T 3fe3_A           55 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCH  131 (328)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            345667999999999998           67788999999999999999997653   47788777777776        


Q ss_pred             -------------------------CC------CCccccccccCCcCccCccccccCCCC-cce----------eEecCC
Q 048710          106 -------------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPFT-EKS----------NLLTKE  143 (208)
Q Consensus       106 -------------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ks----------E~~tg~  143 (208)
                                               +-      ..........||+.|+|||.+.+..++ .++          |++||+
T Consensus       132 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  211 (328)
T 3fe3_A          132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS  211 (328)
T ss_dssp             HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSS
T ss_pred             HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCC
Confidence                                     00      011122456799999999999987776 555          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+..      .++...    ...+.++...||+.+ .+|||+
T Consensus       212 ~pf~~~~------~~~-~~~~i~~~~~------~~p~~~----s~~~~~li~~~L~~dP~~R~t~  259 (328)
T 3fe3_A          212 LPFDGQN------LKE-LRERVLRGKY------RIPFYM----STDCENLLKRFLVLNPIKRGTL  259 (328)
T ss_dssp             CSSCCSS------HHH-HHHHHHHCCC------CCCTTS----CHHHHHHHHHHCCSSTTTSCCH
T ss_pred             CCCCCCC------HHH-HHHHHHhCCC------CCCCCC----CHHHHHHHHHHCCCChhHCcCH
Confidence            9997432      222 2222222221      111111    224557777999999 999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.48  E-value=7.4e-14  Score=108.26  Aligned_cols=147  Identities=12%  Similarity=0.085  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..|.+|+.++.+++            ...+..++||||+ +|+|.+++.....  .+++.....++.++           
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~  125 (296)
T 3uzp_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46899999999887            5667889999999 9999999985443  58999998888887           


Q ss_pred             -------------C---CC---------Cc--------------cccccccCCcCccCccccccCCCCcce---------
Q 048710          106 -------------L---AD---------QT--------------YMTTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 -------------~---~~---------~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                   .   .+         ..              .......||+.|+|||.+.+..++.++         
T Consensus       126 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  205 (296)
T 3uzp_A          126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  205 (296)
T ss_dssp             EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHH
Confidence                         0   00         00              011345689999999999998888888         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |++||+.||..............+.........     +.+...++    ..+.+++.+||+.+ ++|||+
T Consensus       206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~  268 (296)
T 3uzp_A          206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----EVLCKGYP----SEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----HHHTTTSC----HHHHHHHHHHHTSCTTCCCCH
T ss_pred             HHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----HHHHhhCC----HHHHHHHHHHHhcCcCcCCCH
Confidence             999999999854333333333222222111110     01111222    35677888999999 999986

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.48  E-value=4.6e-14  Score=109.52  Aligned_cols=147  Identities=12%  Similarity=0.049  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.+|+.++.++.            .+.+..++|+||+ +|+|.+++.....  .+++.....++.++           
T Consensus        50 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~  126 (298)
T 1csn_A           50 PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKS  126 (298)
T ss_dssp             CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46888999998884            5678899999999 9999999986543  58999999888888           


Q ss_pred             -------------CCCCc----------------------------cccccccCCcCccCccccccCCCCcce-------
Q 048710          106 -------------LADQT----------------------------YMTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -------------~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                   ..+..                            .......||+.|+|||.+.+..++.++       
T Consensus       127 ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  206 (298)
T 1csn_A          127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH  206 (298)
T ss_dssp             EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence                         00000                            011244589999999999998888888       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++||+.||..............+.........     +.+...    ....+.+++..||+.+ ++||++
T Consensus       207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~RP~~  271 (298)
T 1csn_A          207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-----RELCAG----FPEEFYKYMHYARNLAFDATPDY  271 (298)
T ss_dssp             HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-----HHHTTT----SCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH-----HHHHhh----CcHHHHHHHHHHhcCCcccCCCH
Confidence               999999999854322211111111111111111     111111    2345678888999999 999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.47  E-value=1.1e-14  Score=112.30  Aligned_cols=144  Identities=15%  Similarity=0.274  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++          
T Consensus        55 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~  132 (281)
T 3cc6_A           55 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESI  132 (281)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34578999999999988          455677999999999999999986543  48888888887776          


Q ss_pred             -----------------------CCC--------CccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -----------------------LAD--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -----------------------~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                             +-+        .........||+.|+|||.+.+..++.++          |++| |+
T Consensus       133 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~  212 (281)
T 3cc6_A          133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK  212 (281)
T ss_dssp             TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCC
Confidence                                   000        00112234567899999999888888887          9998 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....   .....    ....+....     ....    ....+.+++..||+.+ ++|||+
T Consensus       213 ~p~~~~~~---~~~~~----~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rps~  261 (281)
T 3cc6_A          213 QPFFWLEN---KDVIG----VLEKGDRLP-----KPDL----CPPVLYTLMTRCWDYDPSDRPRF  261 (281)
T ss_dssp             CTTTTSCG---GGHHH----HHHHTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCcccCCh---HHHHH----HHhcCCCCC-----CCCC----CCHHHHHHHHHHccCCchhCcCH
Confidence            99874321   12221    122221110     1111    2234667888999999 999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.47  E-value=1.3e-13  Score=111.35  Aligned_cols=104  Identities=16%  Similarity=0.150  Sum_probs=79.6

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ......|.+|+.++.+++           .+.+..++||||+++|+|.+++...... .+++.....++.++        
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH  145 (389)
T 3gni_B           67 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIH  145 (389)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHH
Confidence            344567899999999988           6778899999999999999999875333 58888888888877        


Q ss_pred             ----------------CCCC-----------------------ccccccccCCcCccCcccccc--CCCCcce-------
Q 048710          106 ----------------LADQ-----------------------TYMTTQVQGTFGYLDLQYFQS--SPFTEKS-------  137 (208)
Q Consensus       106 ----------------~~~~-----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~ks-------  137 (208)
                                      ..+.                       ........||+.|+|||.+.+  ..++.++       
T Consensus       146 ~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  225 (389)
T 3gni_B          146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI  225 (389)
T ss_dssp             HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHH
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHH
Confidence                            0000                       000122468899999999987  5788877       


Q ss_pred             ---eEecCCCCCCCC
Q 048710          138 ---NLLTKEKPICLT  149 (208)
Q Consensus       138 ---E~~tg~~p~~~~  149 (208)
                         |++||+.||...
T Consensus       226 il~el~~g~~pf~~~  240 (389)
T 3gni_B          226 TACELANGHVPFKDM  240 (389)
T ss_dssp             HHHHHHHSSCTTTTC
T ss_pred             HHHHHHHCCCCCCCC
Confidence               999999999743

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.47  E-value=7e-15  Score=112.65  Aligned_cols=143  Identities=17%  Similarity=0.290  Sum_probs=98.8

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+|.+|+.++.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        46 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~  123 (268)
T 3sxs_A           46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESH  123 (268)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467999999999988           667789999999999999999986533  48899888888887          


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                                     ..+.........||+.|+|||.+.+..++.++          |++| |+
T Consensus       124 ~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  203 (268)
T 3sxs_A          124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK  203 (268)
T ss_dssp             TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTC
T ss_pred             CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCC
Confidence                                           00011112234456789999999888888888          9999 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ...... ....+..  ...+   ...    ...+.+++..||+.+ ++|||+
T Consensus       204 ~p~~~~~------~~~~~~-~~~~~~~--~~~~---~~~----~~~l~~li~~~l~~~p~~Rps~  252 (268)
T 3sxs_A          204 MPYDLYT------NSEVVL-KVSQGHR--LYRP---HLA----SDTIYQIMYSCWHELPEKRPTF  252 (268)
T ss_dssp             CTTTTSC------HHHHHH-HHHTTCC--CCCC---TTS----CHHHHHHHHHTTCSSGGGSCCH
T ss_pred             CCccccC------hHHHHH-HHHcCCC--CCCC---CcC----hHHHHHHHHHHcCCChhhCcCH
Confidence            9987432      111111 1222211  0111   111    234667888999999 999996

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.47  E-value=3.1e-13  Score=106.09  Aligned_cols=159  Identities=14%  Similarity=0.189  Sum_probs=104.9

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ..+.+.+|++++.+++             ......++||||+++|+|.+++........+++.....++.++        
T Consensus        50 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  129 (319)
T 4euu_A           50 PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (319)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999998             2344789999999999999999876543358999988888877        


Q ss_pred             ---------------C----CC----------------CccccccccCCcCccCccccc--------cCCCCcce-----
Q 048710          106 ---------------L----AD----------------QTYMTTQVQGTFGYLDLQYFQ--------SSPFTEKS-----  137 (208)
Q Consensus       106 ---------------~----~~----------------~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ks-----  137 (208)
                                     .    .+                .........||..|+|||.+.        +..++.++     
T Consensus       130 ~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diwsl  209 (319)
T 4euu_A          130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI  209 (319)
T ss_dssp             HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHH
T ss_pred             HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHH
Confidence                           0    00                011112456899999999986        46677777     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcC---ccccc---------cccccc--ccCcHHHHHHHHHHHHHhh
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKED---RLFEI---------FDGLVL--KEGGKDEIVVVVKLKKRCL  198 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~~~---------~d~~l~--~~~~~~~~~~~~~l~~~C~  198 (208)
                           |++||+.||.......  .....+.......   .+..+         .++.+.  ...+......+.++...||
T Consensus       210 G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  287 (319)
T 4euu_A          210 GVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL  287 (319)
T ss_dssp             HHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhc
Confidence                 9999999997432211  1222222222211   00000         011111  1233566677888899999


Q ss_pred             cCC-CCCCCC
Q 048710          199 NLN-EKKPTM  207 (208)
Q Consensus       199 ~~~-~~RPsm  207 (208)
                      +.| .+|||+
T Consensus       288 ~~dP~~R~s~  297 (319)
T 4euu_A          288 EADQEKCWGF  297 (319)
T ss_dssp             CCCTTTSCCH
T ss_pred             cCChhhhccH
Confidence            999 999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.47  E-value=8.2e-15  Score=113.12  Aligned_cols=143  Identities=13%  Similarity=0.199  Sum_probs=99.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|++++.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        62 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~  139 (283)
T 3gen_A           62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK  139 (283)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467999999999998           667789999999999999999987433  58899888888877          


Q ss_pred             --------------CC---------CCc--------cccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 --------------LA---------DQT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 --------------~~---------~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                    ..         +..        .......||+.|+|||.+.+..++.++          |++| |+
T Consensus       140 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~  219 (283)
T 3gen_A          140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK  219 (283)
T ss_dssp             TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred             CccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence                          00         000        011233457789999999988888888          9998 99


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....      .. .......+..     ...    +......+.+++.+||+.+ ++|||+
T Consensus       220 ~p~~~~~~------~~-~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~  268 (283)
T 3gen_A          220 MPYERFTN------SE-TAEHIAQGLR-----LYR----PHLASEKVYTIMYSCWHEKADERPTF  268 (283)
T ss_dssp             CTTTTSCH------HH-HHHHHHTTCC-----CCC----CTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             CCccccCh------hH-HHHHHhcccC-----CCC----CCcCCHHHHHHHHHHccCChhHCcCH
Confidence            99874321      11 1112222210     111    1111235667888999999 999986

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.47  E-value=1.7e-13  Score=109.10  Aligned_cols=149  Identities=14%  Similarity=0.222  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      .....+.+|..++.++ +           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++        
T Consensus        51 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH  127 (345)
T 3a8x_A           51 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH  127 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999887 3           67789999999999999999998643   47888877777766        


Q ss_pred             -------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                               +       ...........||+.|+|||.+.+..++.++          |++||+
T Consensus       128 ~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  207 (345)
T 3a8x_A          128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR  207 (345)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC
Confidence                                     0       0111123456799999999999988888888          999999


Q ss_pred             CCCCCCCccCC--ccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEEN--KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||........  ......+......+..      .+....    ...+.++..+||+.+ .+||+.
T Consensus       208 ~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~~~----s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          208 SPFDIVGSSDNPDQNTEDYLFQVILEKQI------RIPRSL----SVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CTTTTTTC-------CHHHHHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCcCCcccccccccccHHHHHHHHHcCCC------CCCCCC----CHHHHHHHHHHhcCCHhHCCCC
Confidence            99974221111  1112233333333221      111112    234567778999999 999984

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.46  E-value=1.9e-13  Score=107.81  Aligned_cols=145  Identities=15%  Similarity=0.243  Sum_probs=100.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~  133 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL  133 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC
Confidence            3568999999999998           67788999999999999999997643   58898888888877          


Q ss_pred             --------------CCCC-------------------ccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 --------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                    ..+.                   ........||+.|+|||.+.+..++.++          |++||
T Consensus       134 ~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  213 (326)
T 2y0a_A          134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  213 (326)
T ss_dssp             TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHC
Confidence                          0000                   0112245689999999999988888888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||....      ......... .....  +.+....    .....+.+++.+||+.+ .+|||+
T Consensus       214 ~~pf~~~~------~~~~~~~~~-~~~~~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~  266 (326)
T 2y0a_A          214 ASPFLGDT------KQETLANVS-AVNYE--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTI  266 (326)
T ss_dssp             CCSSCCSS------HHHHHHHHH-HTCCC--CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cCCCCCCC------HHHHHHHHH-hcCCC--cCccccc----cCCHHHHHHHHHHccCChhhCCCH
Confidence            99997421      111111111 11110  0111111    11234567778999999 999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.46  E-value=2.6e-13  Score=108.69  Aligned_cols=147  Identities=17%  Similarity=0.196  Sum_probs=101.3

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+.++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++        
T Consensus        69 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH  145 (362)
T 2bdw_A           69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH  145 (362)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            345578999999999998           67788999999999999999998643   58888888888777        


Q ss_pred             ----------------CC-C-----------------CccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------LA-D-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------~~-~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                      .. +                 .........||+.|+|||++.+..++.++          |++|
T Consensus       146 ~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  225 (362)
T 2bdw_A          146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  225 (362)
T ss_dssp             HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH
Confidence                            00 0                 01112245789999999999988888888          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||....      ... +......+... ...+ ....    ....+.+++..||+.+ ++|||+
T Consensus       226 g~~Pf~~~~------~~~-~~~~i~~~~~~-~~~~-~~~~----~~~~~~~li~~~L~~dP~~R~t~  279 (362)
T 2bdw_A          226 GYPPFWDED------QHR-LYAQIKAGAYD-YPSP-EWDT----VTPEAKSLIDSMLTVNPKKRITA  279 (362)
T ss_dssp             SSCSSCCSS------HHH-HHHHHHHTCCC-CCTT-GGGG----SCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCCC------HHH-HHHHHHhCCCC-CCcc-cccC----CCHHHHHHHHHHcCCChhhCcCH
Confidence            999997431      111 22222222211 0000 0011    1234567777999999 999985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.46  E-value=4.6e-15  Score=116.68  Aligned_cols=157  Identities=18%  Similarity=0.148  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....|.+|++++.+++             ...+..++||||+++|+|.+++.+.    .+++.....++.++       
T Consensus        75 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~L  150 (318)
T 3lxp_A           75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYL  150 (318)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHH
Confidence            44577999999999998             2357789999999999999999764    48888888888877       


Q ss_pred             -----------------CCC-----------------C--ccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 -----------------LAD-----------------Q--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 -----------------~~~-----------------~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                       ..+                 .  ........||..|+|||.+.+..++.++          |+
T Consensus       151 H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  230 (318)
T 3lxp_A          151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL  230 (318)
T ss_dssp             HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             HhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                             000                 0  0112234577889999999888888777          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||..|+....... ..+..+.........+.+.++.......+......+.+++.+||+.+ .+|||+
T Consensus       231 l~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  298 (318)
T 3lxp_A          231 LTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF  298 (318)
T ss_dssp             HTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HhCCCcccccchhh-hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCH
Confidence            99999987321000 00000000000000011111111111222233456778888999999 999996

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.46  E-value=1.6e-13  Score=112.83  Aligned_cols=146  Identities=16%  Similarity=0.182  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++         
T Consensus        52 ~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~  128 (444)
T 3soa_A           52 RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQ  128 (444)
T ss_dssp             HHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34567999999999998           77888999999999999999998653   58888888887777         


Q ss_pred             ---------------C---CC----------------CccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ---------------L---AD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------~---~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                     .   .+                .........||++|+|||.+.+..++.++          |+++
T Consensus       129 ~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~  208 (444)
T 3soa_A          129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV  208 (444)
T ss_dssp             TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh
Confidence                           0   00                01112345789999999999988898888          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||....      ... +......+... ...+. ...    ....+.++...||+.+ ++|||+
T Consensus       209 G~~Pf~~~~------~~~-~~~~i~~~~~~-~~~~~-~~~----~s~~~~~li~~~L~~dP~~Rpta  262 (444)
T 3soa_A          209 GYPPFWDED------QHR-LYQQIKAGAYD-FPSPE-WDT----VTPEAKDLINKMLTINPSKRITA  262 (444)
T ss_dssp             SSCSCCCSS------HHH-HHHHHHHTCCC-CCTTT-TTT----SCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCCcc------HHH-HHHHHHhCCCC-CCccc-ccc----CCHHHHHHHHHHcCCChhHCCCH
Confidence            999997421      111 22222233211 11111 011    1234567777999999 999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.46  E-value=9.6e-14  Score=112.47  Aligned_cols=147  Identities=14%  Similarity=0.219  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++.++.            .+.+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        96 ~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~  172 (396)
T 4dc2_A           96 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER  172 (396)
T ss_dssp             CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            346889999998763            67888999999999999999998653   58888887777766          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||++.+..++.++          |++||+.|
T Consensus       173 givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~P  252 (396)
T 4dc2_A          173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  252 (396)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                                   0       1111223456799999999999998888888          99999999


Q ss_pred             CCCCCccCC--ccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEEN--KSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |........  ......+......+.+      .++...    ...+.+++..||+.+ .+||+.
T Consensus       253 f~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~~~----s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          253 FDIVGSSDNPDQNTEDYLFQVILEKQI------RIPRSL----SVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             STTTTC------CCHHHHHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CcccccccccchhhHHHHHHHHhcccc------CCCCcC----CHHHHHHHHHHhcCCHhHcCCC
Confidence            964321111  1122333333333321      111112    234567777999999 999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.45  E-value=1.2e-13  Score=110.41  Aligned_cols=141  Identities=14%  Similarity=0.147  Sum_probs=98.7

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|..++..+.            .+.+..|+||||+++|+|.+++....   .+++.....++.++         
T Consensus        63 ~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~  139 (353)
T 2i0e_A           63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQS  139 (353)
T ss_dssp             CHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467889999998773            67789999999999999999998643   47888887777776         


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +       ...........||+.|+|||.+.+..++.++          |++||+.
T Consensus       140 ~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~  219 (353)
T 2i0e_A          140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA  219 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCC
Confidence                                    0       0011123456799999999999988888887          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +...+..+.+      .+....    ...+.+++..||+.+ .+||+.
T Consensus       220 Pf~~~~------~~~-~~~~i~~~~~------~~p~~~----s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          220 PFEGED------EDE-LFQSIMEHNV------AYPKSM----SKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             SSCCSS------HHH-HHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSCTTSCTTC
T ss_pred             CCCCCC------HHH-HHHHHHhCCC------CCCCCC----CHHHHHHHHHHhhcCHHHcCCC
Confidence            997431      111 2222222221      111112    234567777999999 999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.45  E-value=2.2e-13  Score=109.94  Aligned_cols=143  Identities=15%  Similarity=0.210  Sum_probs=98.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.+|.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        58 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~  134 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ  134 (384)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467899999999988           67788999999999999999998643   58888877777766          


Q ss_pred             -----------------------C------CCCccccccccCCcCccCcccccc---CCCCcce----------eEecCC
Q 048710          106 -----------------------L------ADQTYMTTQVQGTFGYLDLQYFQS---SPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -----------------------~------~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ks----------E~~tg~  143 (208)
                                             +      ...........||+.|+|||++.+   ..++.++          |++||+
T Consensus       135 givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~  214 (384)
T 4fr4_A          135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR  214 (384)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC
Confidence                                   0      011122345679999999999974   3467676          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .||.....   ........ .......          ..+......+..++..||+.+ .+||+
T Consensus       215 ~Pf~~~~~---~~~~~~~~-~~~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          215 RPYHIRSS---TSSKEIVH-TFETTVV----------TYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             CSSCCCTT---SCHHHHHH-HHHHCCC----------CCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCCCCC---ccHHHHHH-HHhhccc----------CCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            99974322   12222222 2211111          111122235667788999999 99997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.45  E-value=2.3e-13  Score=108.02  Aligned_cols=140  Identities=11%  Similarity=0.134  Sum_probs=97.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        48 ~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  124 (337)
T 1o6l_A           48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567899999999888           67788999999999999999998643   47787777776666          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       125 ~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  204 (337)
T 1o6l_A          125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCC
Confidence                                   0       0111123456789999999999998888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |....      ... +......+.+      .+....    ...+.++...||+.+ .+||+
T Consensus       205 f~~~~------~~~-~~~~i~~~~~------~~p~~~----s~~~~~li~~lL~~dP~~R~g  249 (337)
T 1o6l_A          205 FYNQD------HER-LFELILMEEI------RFPRTL----SPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             SCCSS------HHH-HHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCCC------HHH-HHHHHHcCCC------CCCCCC----CHHHHHHHHHHhhcCHHHhcC
Confidence            97421      111 1222222211      111112    234567777999999 99993

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.45  E-value=1.6e-13  Score=115.82  Aligned_cols=146  Identities=14%  Similarity=0.112  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.+|.+++           .+.+..|+||||+++|+|.+++...... .+++.....++.+|           
T Consensus       228 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH~~g  306 (576)
T 2acx_A          228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRER  306 (576)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456899999999988           6778999999999999999999875432 58888888877776           


Q ss_pred             ----------------------CC------CCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCC
Q 048710          106 ----------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 ----------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~  147 (208)
                                            +-      ..........||+.|+|||++.+..++.++          |++||..||.
T Consensus       307 IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~  386 (576)
T 2acx_A          307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ  386 (576)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSS
T ss_pred             EeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence                                  00      011112346799999999999988888887          9999999998


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....   .....+.........      ......    ...+.+++..||+.+ .+||++
T Consensus       387 ~~~~~---~~~~~i~~~i~~~~~------~~p~~~----s~~~~dLI~~lL~~dP~~R~g~  434 (576)
T 2acx_A          387 QRKKK---IKREEVERLVKEVPE------EYSERF----SPQARSLCSQLLCKDPAERLGC  434 (576)
T ss_dssp             CSSSC---CCHHHHHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSSGGGSTTC
T ss_pred             ccccc---hhHHHHHHHhhcccc------cCCccC----CHHHHHHHHHhccCCHHHcCCC
Confidence            43211   111222222222211      111112    234567777999999 999953

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.45  E-value=2.3e-14  Score=112.03  Aligned_cols=147  Identities=17%  Similarity=0.264  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC---------------CCCCCHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE---------------EFPIAWEMQ   98 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~---------------~~~l~~~~r   98 (208)
                      ...+.|.+|+.++.++ +           ...+..++||||+++|+|.+++.....               ...+++...
T Consensus        68 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (313)
T 1t46_A           68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL  147 (313)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred             HHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence            3457899999999999 4           667789999999999999999986432               114889988


Q ss_pred             HHHHHhC-----------------------------------------CCC-CccccccccCCcCccCccccccCCCCcc
Q 048710           99 LHIVVDS-----------------------------------------LAD-QTYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus        99 ~~i~~~i-----------------------------------------~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                      ..++.++                                         ... .........||+.|+|||.+.+..++.+
T Consensus       148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  227 (313)
T 1t46_A          148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE  227 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChH
Confidence            8888877                                         000 0011123446788999999988888888


Q ss_pred             e----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCC
Q 048710          137 S----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKK  204 (208)
Q Consensus       137 s----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~R  204 (208)
                      +          |++| |..||......      .........+..     +..    +......+.+++.+||+.+ .+|
T Consensus       228 ~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~R  292 (313)
T 1t46_A          228 SDVWSYGIFLWELFSLGSSPYPGMPVD------SKFYKMIKEGFR-----MLS----PEHAPAEMYDIMKTCWDADPLKR  292 (313)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCSS------HHHHHHHHHTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcccch------hHHHHHhccCCC-----CCC----cccCCHHHHHHHHHHcCCCchhC
Confidence            8          9999 99998743211      112222222210     111    1122345667888999999 999


Q ss_pred             CCC
Q 048710          205 PTM  207 (208)
Q Consensus       205 Psm  207 (208)
                      ||+
T Consensus       293 ps~  295 (313)
T 1t46_A          293 PTF  295 (313)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.45  E-value=2.8e-14  Score=112.51  Aligned_cols=152  Identities=16%  Similarity=0.219  Sum_probs=101.0

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+.|.+|++++.+++             .+.+..++||||+++|+|.+++.....  .+++..+..++.++      
T Consensus        65 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~  142 (327)
T 3lxl_A           65 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEY  142 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHH
Confidence            344567999999999998             256779999999999999999986433  48899988888877      


Q ss_pred             ---------------------------C--------CCC--ccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 ---------------------------L--------ADQ--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 ---------------------------~--------~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                 +        ...  ........||..|+|||.+.+..++.++          |
T Consensus       143 lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  222 (327)
T 3lxl_A          143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE  222 (327)
T ss_dssp             HHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             HHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHH
Confidence                                       0        000  0112234578889999999888888877          9


Q ss_pred             EecCCCCCCCCCcc--------CCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYE--------ENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||..|+......        ........+......+         .....+......+.+++..||+.+ .+|||+
T Consensus       223 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  291 (327)
T 3lxl_A          223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSF  291 (327)
T ss_dssp             HHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCH
Confidence            99999998632110        0000111111112111         111222233445678888999999 999996

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.45  E-value=1.3e-14  Score=112.53  Aligned_cols=142  Identities=15%  Similarity=0.198  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.|.+|+.++.+++          ...+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        61 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           61 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3568999999999988          55677899999999999999998643   48888888888877           


Q ss_pred             ----------------------CCC--------Cc--cccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 ----------------------LAD--------QT--YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 ----------------------~~~--------~~--~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                            +-+        ..  .......||+.|+|||.+.+..++.++          |++| |
T Consensus       138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  217 (291)
T 1xbb_A          138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  217 (291)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcC
Confidence                                  000        00  011223456889999999888888777          9999 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....       ..+......+...     .+    +......+.+++..||+.+ ++|||+
T Consensus       218 ~~p~~~~~~-------~~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~  267 (291)
T 1xbb_A          218 QKPYRGMKG-------SEVTAMLEKGERM-----GC----PAGCPREMYDLMNLCWTYDVENRPGF  267 (291)
T ss_dssp             CCSSTTCCH-------HHHHHHHHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCCCH-------HHHHHHHHcCCCC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            999874321       1122223222211     11    1122345677888999999 999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.45  E-value=3.1e-13  Score=104.84  Aligned_cols=143  Identities=15%  Similarity=0.208  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++         
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~  133 (294)
T 2rku_A           57 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR  133 (294)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            44568999999999988           67788999999999999999987643   58898888888877         


Q ss_pred             ------------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +-+       .........||+.|+|||.+.+..++.++          |++||+.
T Consensus       134 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  213 (294)
T 2rku_A          134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  213 (294)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence                                    000       01112335689999999999888888777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||....      ....... ...+..      .+....+    ..+.+++.+||+.+ ++|||+.
T Consensus       214 p~~~~~------~~~~~~~-~~~~~~------~~~~~~~----~~~~~li~~~l~~~p~~Rps~~  261 (294)
T 2rku_A          214 PFETSC------LKETYLR-IKKNEY------SIPKHIN----PVAASLIQKMLQTDPTARPTIN  261 (294)
T ss_dssp             TTCCSS------HHHHHHH-HHTTCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCGG
T ss_pred             CCCCCC------HHHHHHH-HhhccC------CCccccC----HHHHHHHHHHcccChhhCcCHH
Confidence            987432      1111111 212211      1111222    34567788999999 9999973

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.45  E-value=9.7e-15  Score=115.31  Aligned_cols=147  Identities=12%  Similarity=0.198  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-----------CCCCCHHHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-----------EFPIAWEMQLHIV  102 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-----------~~~l~~~~r~~i~  102 (208)
                      .....|.+|+.++.++ +           ...+..++||||+++|+|.+++.....           ...+++.....++
T Consensus        91 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (333)
T 2i1m_A           91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS  170 (333)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence            3456899999999999 4           667789999999999999999975321           1257888888888


Q ss_pred             HhC---------------------------------CCC---------CccccccccCCcCccCccccccCCCCcce---
Q 048710          103 VDS---------------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS---  137 (208)
Q Consensus       103 ~~i---------------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks---  137 (208)
                      .++                                 +-+         .........||+.|+|||.+.+..++.++   
T Consensus       171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  250 (333)
T 2i1m_A          171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW  250 (333)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHH
Confidence            877                                 000         00011234467889999999888888888   


Q ss_pred             -------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                             |++| |..||......      ..+......+..     +    ..+......+.+++..||+.+ ++|||+
T Consensus       251 slG~il~el~t~g~~p~~~~~~~------~~~~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~  314 (333)
T 2i1m_A          251 SYGILLWEIFSLGLNPYPGILVN------SKFYKLVKDGYQ-----M----AQPAFAPKNIYSIMQACWALEPTHRPTF  314 (333)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCCSS------HHHHHHHHHTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHHHcCCCCCCcccchh------HHHHHHHhcCCC-----C----CCCCCCCHHHHHHHHHHhccChhhCcCH
Confidence                   9998 89998743211      111222222211     0    111112235667888999999 999996

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.45  E-value=2.5e-14  Score=113.18  Aligned_cols=147  Identities=14%  Similarity=0.228  Sum_probs=100.0

Q ss_pred             hhhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHH
Q 048710           45 EGKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQL   99 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~   99 (208)
                      ......|.+|+.++.++ +           ...+..++||||+++|+|.+++.....             ...+++..+.
T Consensus        81 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (334)
T 2pvf_A           81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV  160 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHH
Confidence            34457899999999998 4           667789999999999999999986532             1248888888


Q ss_pred             HHHHhC---------------------------------CCCC---------ccccccccCCcCccCccccccCCCCcce
Q 048710          100 HIVVDS---------------------------------LADQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       100 ~i~~~i---------------------------------~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .++.++                                 +-+.         ........||+.|+|||.+.+..++.++
T Consensus       161 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  240 (334)
T 2pvf_A          161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS  240 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHH
Confidence            888877                                 0000         0112234567889999999888888888


Q ss_pred             ----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          138 ----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       138 ----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                                |++| |..||....      ... +......+...     ....    .....+.+++..||+.+ .+||
T Consensus       241 Di~slG~il~ellt~g~~p~~~~~------~~~-~~~~~~~~~~~-----~~~~----~~~~~l~~li~~~l~~dp~~Rp  304 (334)
T 2pvf_A          241 DVWSFGVLMWEIFTLGGSPYPGIP------VEE-LFKLLKEGHRM-----DKPA----NCTNELYMMMRDCWHAVPSQRP  304 (334)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCC------HHH-HHHHHHHTCCC-----CCCT----TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcCC------HHH-HHHHHhcCCCC-----CCCc----cCCHHHHHHHHHHccCChhhCc
Confidence                      9999 999987432      111 22222222111     1111    22235677888999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       305 s~  306 (334)
T 2pvf_A          305 TF  306 (334)
T ss_dssp             CH
T ss_pred             CH
Confidence            86

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.45  E-value=5.3e-14  Score=109.35  Aligned_cols=145  Identities=17%  Similarity=0.268  Sum_probs=95.8

Q ss_pred             hhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           45 EGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ....+.|.+|+.++.+++            ...+..++||||+++|+|.+++.+...  .+++.....++.++       
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~l  144 (298)
T 3f66_A           67 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL  144 (298)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHH
Confidence            344578999999999988            456678999999999999999986543  57888888887777       


Q ss_pred             -----------------CCC--------------------CccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 -----------------LAD--------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 -----------------~~~--------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                       ..+                    .........||+.|+|||.+.+..++.++          |
T Consensus       145 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  224 (298)
T 3f66_A          145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  224 (298)
T ss_dssp             HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHH
Confidence                             000                    00112344567889999999988888888          9


Q ss_pred             EecC-CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTK-EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++|| ..|+....   ......    ....+...  ..   ....    ...+.+++..||+.+ ++|||+
T Consensus       225 l~~~~~~~~~~~~---~~~~~~----~~~~~~~~--~~---~~~~----~~~l~~li~~~l~~~p~~Rps~  279 (298)
T 3f66_A          225 LMTRGAPPYPDVN---TFDITV----YLLQGRRL--LQ---PEYC----PDPLYEVMLKCWHPKAEMRPSF  279 (298)
T ss_dssp             HHTTSCCSSTTSC---TTTHHH----HHHTTCCC--CC---CTTC----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHhCCCCCCccCC---HHHHHH----HHhcCCCC--CC---CccC----CHHHHHHHHHHcCCChhhCcCH
Confidence            9994 55554321   111211    11112110  00   1112    235677888999999 999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.45  E-value=9.1e-14  Score=106.95  Aligned_cols=141  Identities=20%  Similarity=0.202  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..++|+||+++|+|.+++.+...  .+++.....++.++           
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  132 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSHG  132 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999988           677889999999999999999986543  58899888888887           


Q ss_pred             ----------------------CCCC-------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LADQ-------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-+.       ........||+.|+|||.+.+..++.++          |++||+.||
T Consensus       133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  212 (278)
T 3cok_A          133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF  212 (278)
T ss_dssp             EECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSS
T ss_pred             eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                                  0000       0111235689999999999888888877          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .......   .   .. .....      +..+...    ....+.+++.+||+.+ ++|||+
T Consensus       213 ~~~~~~~---~---~~-~~~~~------~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~  257 (278)
T 3cok_A          213 DTDTVKN---T---LN-KVVLA------DYEMPSF----LSIEAKDLIHQLLRRNPADRLSL  257 (278)
T ss_dssp             CCCSCC------------CCSS------CCCCCTT----SCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CChhHHH---H---HH-HHhhc------ccCCccc----cCHHHHHHHHHHcccCHhhCCCH
Confidence            7432111   0   00 00000      1111111    2235567888999999 999986

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.44  E-value=2.2e-13  Score=110.13  Aligned_cols=146  Identities=14%  Similarity=0.161  Sum_probs=101.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+.+|.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        91 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A           91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4457999999999998           677889999999999999999986543  58898888888877          


Q ss_pred             --------------CCC-----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------LAD-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------~~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                    ..+                 .........||+.|+|||++.+..++.++          |++||..
T Consensus       169 givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  248 (387)
T 1kob_A          169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS  248 (387)
T ss_dssp             TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             CeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCC
Confidence                          000                 00111234689999999999988888888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ....+.... ....  .+++......    ...+.+++..||+.+ .+|||+
T Consensus       249 Pf~~~~------~~~~~~~i~-~~~~--~~~~~~~~~~----s~~~~~li~~~L~~dP~~Rpt~  299 (387)
T 1kob_A          249 PFAGED------DLETLQNVK-RCDW--EFDEDAFSSV----SPEAKDFIKNLLQKEPRKRLTV  299 (387)
T ss_dssp             SSCCSS------HHHHHHHHH-HCCC--CCCSSTTTTS----CHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCC------HHHHHHHHH-hCCC--CCCccccccC----CHHHHHHHHHHcCCChhHCcCH
Confidence            997431      111122221 2211  0111111122    234567778999999 999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.44  E-value=1.4e-13  Score=110.64  Aligned_cols=147  Identities=11%  Similarity=0.103  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|++++.+++           .+.+..+|||||+++|+|.+++.+...  .+++..+..++.++         
T Consensus       128 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  205 (373)
T 2x4f_A          128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQ  205 (373)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34578999999999998           667889999999999999999976433  48888888777777         


Q ss_pred             --------------C--CC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------L--AD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~--~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                    .  .+                .........||++|+|||.+.+..++.++          |++||+
T Consensus       206 ~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  285 (373)
T 2x4f_A          206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL  285 (373)
T ss_dssp             TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC
Confidence                          0  00                01112234589999999999888888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ....+....... . . +.+......    ...+.++...||+.+ .+|||+
T Consensus       286 ~pf~~~~------~~~~~~~i~~~~-~-~-~~~~~~~~~----~~~~~~li~~~L~~dp~~Rps~  337 (373)
T 2x4f_A          286 SPFLGDN------DAETLNNILACR-W-D-LEDEEFQDI----SEEAKEFISKLLIKEKSWRISA  337 (373)
T ss_dssp             CTTCCSS------HHHHHHHHHHTC-C-C-SCSGGGTTS----CHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCCC------HHHHHHHHHhcc-C-C-CChhhhccC----CHHHHHHHHHHcCCChhhCCCH
Confidence            9997432      112222222111 1 0 011111112    235567778999999 999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.44  E-value=9.4e-14  Score=110.81  Aligned_cols=140  Identities=13%  Similarity=0.138  Sum_probs=99.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  160 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3467899999999988           66788999999999999999998643   47888877777776          


Q ss_pred             --------------CC---------CC----ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 --------------LA---------DQ----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 --------------~~---------~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                    ..         +.    ........||+.|+|||.+.+..++.++          |++||..||..
T Consensus       161 ~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  240 (350)
T 1rdq_E          161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence                          00         00    1112345789999999999988888888          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      ..      ... +...+..+.+      .+....    ...+.++...||+.+ .+||+
T Consensus       241 ~~------~~~-~~~~i~~~~~------~~p~~~----~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          241 DQ------PIQ-IYEKIVSGKV------RFPSHF----SSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             SS------HHH-HHHHHHHCCC------CCCTTC----CHHHHHHHHHHSCSCTTTCTT
T ss_pred             CC------HHH-HHHHHHcCCC------CCCCCC----CHHHHHHHHHHhhcCHHhccC
Confidence            31      111 2222223321      111122    234567777999999 99997

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.44  E-value=1.7e-13  Score=105.88  Aligned_cols=143  Identities=10%  Similarity=0.193  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           ...+..++||||+++|+|.+++.....  .+++..+..++.++         
T Consensus        54 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~  131 (289)
T 4fvq_A           54 NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEE  131 (289)
T ss_dssp             GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhh
Confidence            34578999999999998           567788999999999999999987543  38888888888777         


Q ss_pred             ---------------CCCCc--------------------cccccccCCcCccCcccccc-CCCCcce----------eE
Q 048710          106 ---------------LADQT--------------------YMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NL  139 (208)
Q Consensus       106 ---------------~~~~~--------------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~  139 (208)
                                     ..+..                    .......||+.|+|||.+.+ ..++.++          |+
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el  211 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEI  211 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHH
Confidence                           00000                    00112347889999999987 6678777          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||..|+...     ................+...            ...+.+++..||+.+ ++|||+
T Consensus       212 ~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------------~~~l~~li~~~l~~dp~~Rps~  263 (289)
T 4fvq_A          212 CSGGDKPLSA-----LDSQRKLQFYEDRHQLPAPK------------AAELANLINNCMDYEPDHRPSF  263 (289)
T ss_dssp             HTTTCCTTTT-----SCHHHHHHHHHTTCCCCCCS------------SCTTHHHHHHHSCSSGGGSCCH
T ss_pred             HcCCCCCccc-----cchHHHHHHhhccCCCCCCC------------CHHHHHHHHHHcCCChhHCcCH
Confidence            9965544311     11111111111111111111            123467888999999 999986

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.44  E-value=1.7e-13  Score=106.11  Aligned_cols=147  Identities=12%  Similarity=0.100  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.+|+.++.+++            ...+..++||||+ +|+|.+++.....  .+++.....++.++           
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            46888999998887            5677889999999 9999999985443  58999998888887           


Q ss_pred             ------------C---CC----------Cc--------------cccccccCCcCccCccccccCCCCcce---------
Q 048710          106 ------------L---AD----------QT--------------YMTTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 ------------~---~~----------~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                  .   .+          ..              .......||..|+|||.+.+..++.++         
T Consensus       126 ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  205 (296)
T 4hgt_A          126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  205 (296)
T ss_dssp             EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH
Confidence                        0   00          00              011245689999999999998888888         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |++||+.||..............+.........     +.+...+    ...+.+++..||+.+ ++|||+
T Consensus       206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~  268 (296)
T 4hgt_A          206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCH
T ss_pred             HHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----hhhhccC----CHHHHHHHHHHHhcCCCCCCCH
Confidence             999999999864433333332222222111111     0011112    235678888999999 999986

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.44  E-value=1.7e-14  Score=110.22  Aligned_cols=143  Identities=18%  Similarity=0.247  Sum_probs=98.6

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|++++.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++          
T Consensus        46 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~  123 (267)
T 3t9t_A           46 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA  123 (267)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467999999999988           567789999999999999999987543  58888888888777          


Q ss_pred             -----------------------CCCCc--------cccccccCCcCccCccccccCCCCcce----------eEec-CC
Q 048710          106 -----------------------LADQT--------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KE  143 (208)
Q Consensus       106 -----------------------~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~  143 (208)
                                             +-+..        .......||..|+|||.+.+..++.++          |++| |+
T Consensus       124 ~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  203 (267)
T 3t9t_A          124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK  203 (267)
T ss_dssp             TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCC
Confidence                                   00000        011234467789999999888888887          9999 89


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ..... .....+..     +..    +......+.+++.+||+.+ ++|||+
T Consensus       204 ~p~~~~~------~~~~~-~~i~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~  252 (267)
T 3t9t_A          204 IPYENRS------NSEVV-EDISTGFR-----LYK----PRLASTHVYQIMNHCWRERPEDRPAF  252 (267)
T ss_dssp             CTTTTCC------HHHHH-HHHHTTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCC------HHHHH-HHHhcCCc-----CCC----CccCcHHHHHHHHHHccCChhhCcCH
Confidence            9987431      11112 22222211     011    1112235667888999999 999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.44  E-value=2.7e-14  Score=112.76  Aligned_cols=144  Identities=13%  Similarity=0.278  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .....|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++          
T Consensus        59 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~  136 (327)
T 3lzb_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC
Confidence            34678999999999998          334558899999999999999987544  58888888888877          


Q ss_pred             -----------------------C---------CCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 -----------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 -----------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                             +         ...........||+.|+|||.+.+..++.++          |++| |
T Consensus       137 ~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g  216 (327)
T 3lzb_A          137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCC
Confidence                                   0         0011112234467889999999998899888          9999 9


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||.....   ..+    ......+...         ..+......+.+++..||+.+ .+|||+
T Consensus       217 ~~p~~~~~~---~~~----~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~  266 (327)
T 3lzb_A          217 SKPYDGIPA---SEI----SSILEKGERL---------PQPPICTIDVYMIMRKCWMIDADSRPKF  266 (327)
T ss_dssp             CCTTTTCCG---GGH----HHHHHTTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCCH---HHH----HHHHHcCCCC---------CCCccCCHHHHHHHHHHcCCChhHCcCH
Confidence            999974321   112    1222222110         111122335677888999999 999996

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.44  E-value=3.5e-13  Score=106.65  Aligned_cols=143  Identities=15%  Similarity=0.216  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++         
T Consensus        83 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~  159 (335)
T 2owb_A           83 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR  159 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999988           67788999999999999999987643   58899888888877         


Q ss_pred             ---------------CC---------C-------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ---------------LA---------D-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~~---------~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                     ..         +       .........||..|+|||.+.+..++.++          |++||+.
T Consensus       160 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  239 (335)
T 2owb_A          160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP  239 (335)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcC
Confidence                           00         0       01112345689999999999888888777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      ||....      ....... ...+..      .+....+    ..+.+++.+||+.+ ++|||+.
T Consensus       240 pf~~~~------~~~~~~~-~~~~~~------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~  287 (335)
T 2owb_A          240 PFETSC------LKETYLR-IKKNEY------SIPKHIN----PVAASLIQKMLQTDPTARPTIN  287 (335)
T ss_dssp             TTCCSS------HHHHHHH-HHHTCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCGG
T ss_pred             CCCCCC------HHHHHHH-HhcCCC------CCCccCC----HHHHHHHHHHccCChhHCcCHH
Confidence            987431      1111111 112211      1111222    24567788999999 9999973

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.44  E-value=1.1e-13  Score=110.69  Aligned_cols=133  Identities=8%  Similarity=0.075  Sum_probs=88.6

Q ss_pred             CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------C--CCC---------c
Q 048710           66 EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------L--ADQ---------T  110 (208)
Q Consensus        66 ~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~--~~~---------~  110 (208)
                      ...+|||||+ +|+|.+++.....  .++|..+..++.++                        .  .+.         +
T Consensus       125 ~~~~lv~e~~-g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a  201 (364)
T 3op5_A          125 SYRFMIMDRF-GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA  201 (364)
T ss_dssp             EEEEEEEECE-EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTC
T ss_pred             ceEEEEEeCC-CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcc
Confidence            5589999999 9999999987533  59999999998888                        0  000         0


Q ss_pred             --------------cccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHh
Q 048710          111 --------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMK  166 (208)
Q Consensus       111 --------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~  166 (208)
                                    .......||+.|+|||.+.+..++.++          |++||+.||.....  ............ 
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~--~~~~~~~~~~~~-  278 (364)
T 3op5_A          202 YRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK--DPKYVRDSKIRY-  278 (364)
T ss_dssp             EESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT--CHHHHHHHHHHH-
T ss_pred             eecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc--CHHHHHHHHHHh-
Confidence                          000223499999999999998898888          99999999984221  111222222222 


Q ss_pred             cCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          167 EDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       167 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...+..++++.+...   ..+..+.+++..||+.+ .+||++
T Consensus       279 ~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~  317 (364)
T 3op5_A          279 RENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLY  317 (364)
T ss_dssp             HHCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             hhhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCH
Confidence            123444444433211   12345667778999999 999996

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.44  E-value=1.1e-14  Score=112.19  Aligned_cols=144  Identities=13%  Similarity=0.229  Sum_probs=98.3

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.|.+|++++.+++          ...+..++|+||+++|+|.+++...... .+++.....++.++           
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           51 SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3568999999999988          4566789999999999999999764321 48888888888877           


Q ss_pred             -------------C-----------------CCCccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 -------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 -------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                   .                 ...........+|..|+|||.+.+..++.++          |++| |+.
T Consensus       130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  209 (279)
T 1qpc_A          130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (279)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence                         0                 0001111234467889999999888888877          9999 899


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +......+..     +..    +......+.+++..||+.+ ++|||+
T Consensus       210 p~~~~~------~~~-~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~  257 (279)
T 1qpc_A          210 PYPGMT------NPE-VIQNLERGYR-----MVR----PDNCPEELYQLMRLCWKERPEDRPTF  257 (279)
T ss_dssp             SSTTCC------HHH-HHHHHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCcccC------HHH-HHHHHhcccC-----CCC----cccccHHHHHHHHHHhccChhhCCCH
Confidence            987431      111 1122222211     111    1122345667888999999 999996

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.44  E-value=1.4e-13  Score=110.18  Aligned_cols=144  Identities=16%  Similarity=0.236  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.+|.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++           
T Consensus        59 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~g  135 (361)
T 2yab_A           59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKK  135 (361)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999988           67788999999999999999997643   58888888888877           


Q ss_pred             -------------CCCC-------------------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   ..+.                   ........||+.|+|||.+.+..++.++          |+++|.
T Consensus       136 ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~  215 (361)
T 2yab_A          136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  215 (361)
T ss_dssp             EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence                         0000                   0112345689999999999988888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ...... ....+..  -+++......    ...+.++...||+.+ .+|||+
T Consensus       216 ~Pf~~~~------~~~~~~-~i~~~~~--~~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~  267 (361)
T 2yab_A          216 SPFLGDT------KQETLA-NITAVSY--DFDEEFFSQT----SELAKDFIRKLLVKETRKRLTI  267 (361)
T ss_dssp             CSSCCSS------HHHHHH-HHHTTCC--CCCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCC------HHHHHH-HHHhcCC--CCCchhccCC----CHHHHHHHHHHCCCChhHCcCH
Confidence            9997431      111111 2222211  0111111111    234557777999999 999985

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.44  E-value=3.1e-14  Score=112.27  Aligned_cols=148  Identities=16%  Similarity=0.204  Sum_probs=100.6

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC----CCCCCHHHHHHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE----EFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~----~~~l~~~~r~~i~~~i---  105 (208)
                      ......+|.+|+.++.+++           ...+..++||||+++|+|.+++.....    ...+++.....++.++   
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  152 (327)
T 2yfx_A           73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  152 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence            3445668999999999988           666778999999999999999986532    1258888888888877   


Q ss_pred             ---------------------CC-CC--------------------ccccccccCCcCccCccccccCCCCcce------
Q 048710          106 ---------------------LA-DQ--------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       106 ---------------------~~-~~--------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                                           .. +.                    ........||+.|+|||.+.+..++.++      
T Consensus       153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  232 (327)
T 2yfx_A          153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG  232 (327)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHH
Confidence                                 10 00                    0011234568899999999888888888      


Q ss_pred             ----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |++| |..||....      ... +......+...     .....    ....+.+++..||+.+ .+||++
T Consensus       233 ~il~ellt~g~~p~~~~~------~~~-~~~~~~~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~  292 (327)
T 2yfx_A          233 VLLWEIFSLGYMPYPSKS------NQE-VLEFVTSGGRM-----DPPKN----CPGPVYRIMTQCWQHQPEDRPNF  292 (327)
T ss_dssp             HHHHHHHTTSCCSSTTCC------HHH-HHHHHHTTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHcCCCCCCCCcC------HHH-HHHHHhcCCCC-----CCCCC----CCHHHHHHHHHHhcCChhhCcCH
Confidence                9998 899987431      111 12222222111     11112    2235667888999999 999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.44  E-value=3.4e-14  Score=110.71  Aligned_cols=142  Identities=17%  Similarity=0.263  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           .+.+..++||||+++|+|.+++...    .+++.....++.++         
T Consensus        62 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~  137 (303)
T 3a7i_A           62 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHS  137 (303)
T ss_dssp             TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34678999999999987           5678899999999999999999753    58899888888877         


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +       ...........||..|+|||.+.+..++.++          |++||+.
T Consensus       138 ~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  217 (303)
T 3a7i_A          138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP  217 (303)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCC
Confidence                                    0       0011112345689999999999988888888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+....      ... .......+..     +.+...++    ..+.+++..||+.+ .+|||+
T Consensus       218 p~~~~~------~~~-~~~~~~~~~~-----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~  265 (303)
T 3a7i_A          218 PHSELH------PMK-VLFLIPKNNP-----PTLEGNYS----KPLKEFVEACLNKEPSFRPTA  265 (303)
T ss_dssp             TTTTSC------HHH-HHHHHHHSCC-----CCCCSSCC----HHHHHHHHHHCCSSGGGSCCH
T ss_pred             CCCCcC------HHH-HHHHhhcCCC-----CCCccccC----HHHHHHHHHHcCCChhhCcCH
Confidence            987431      111 1111212211     11222222    34667888999999 999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.43  E-value=3.2e-14  Score=122.19  Aligned_cols=143  Identities=10%  Similarity=0.182  Sum_probs=97.0

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.|.+|+.++.+++          ...+..++||||+++|+|.+++.....  .+++..+..++.++           
T Consensus       434 ~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g  511 (656)
T 2j0j_A          434 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESKR  511 (656)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3578999999999988          455678999999999999999986543  58898888887777           


Q ss_pred             ----------------------CCC--------CccccccccCCcCccCccccccCCCCcce----------eEec-CCC
Q 048710          106 ----------------------LAD--------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEK  144 (208)
Q Consensus       106 ----------------------~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~  144 (208)
                                            +-+        .........||+.|+|||.+.+..++.++          |++| |..
T Consensus       512 ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~  591 (656)
T 2j0j_A          512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  591 (656)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCC
Confidence                                  000        01111234567899999999988888888          9987 999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ....+. ....+...         ..+......+.+++.+||+.+ ++|||+
T Consensus       592 Pf~~~~------~~~~~~-~i~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~RPs~  639 (656)
T 2j0j_A          592 PFQGVK------NNDVIG-RIENGERL---------PMPPNCPPTLYSLMTKCWAYDPSRRPRF  639 (656)
T ss_dssp             TTTTCC------HHHHHH-HHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCC------HHHHHH-HHHcCCCC---------CCCccccHHHHHHHHHHcCCChhHCcCH
Confidence            987432      111121 22222111         111122345678888999999 999996

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=5.7e-14  Score=110.72  Aligned_cols=147  Identities=17%  Similarity=0.158  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....+.+|+.++.+++           .+.+..++||||+++|+|.+++.....  .+++.....++.++         
T Consensus        43 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~  120 (321)
T 1tki_A           43 TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHS  120 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34567899999999988           677889999999999999999986543  58888888888877         


Q ss_pred             ---------------CC--C---------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ---------------LA--D---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ---------------~~--~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                     ..  +               .........||+.|+|||.+.+..++.++          |++||.
T Consensus       121 ~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  200 (321)
T 1tki_A          121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                           10  0               00111235589999999999888888887          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ....+.... .+...  .++....    .....+.++..+||+.+ .+|||+
T Consensus       201 ~pf~~~~------~~~~~~~i~-~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dp~~Rpt~  252 (321)
T 1tki_A          201 NPFLAET------NQQIIENIM-NAEYT--FDEEAFK----EISIEAMDFVDRLLVKERKSRMTA  252 (321)
T ss_dssp             CTTCCSS------HHHHHHHHH-HTCCC--CCHHHHT----TSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCcCCC------HHHHHHHHH-cCCCC--CChhhhc----cCCHHHHHHHHHHcCCChhHCcCH
Confidence            9997432      112222222 22110  0111111    12235667888999999 999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.43  E-value=9.1e-14  Score=111.02  Aligned_cols=141  Identities=16%  Similarity=0.137  Sum_probs=95.3

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|..++..+.            .+.+..|+||||+++|+|.+++....   .+++.....++.++         
T Consensus        66 ~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~  142 (353)
T 3txo_A           66 DVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHD  142 (353)
T ss_dssp             THHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467889999999874            67788999999999999999998653   47888877777766         


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +       ...........||+.|+|||++.+..++.++          |++||+.
T Consensus       143 ~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~  222 (353)
T 3txo_A          143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA  222 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCC
Confidence                                    0       0011122356799999999999988888888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +...+..+..      ..    +......+.++...|++.+ .+||+.
T Consensus       223 Pf~~~~------~~~-~~~~i~~~~~------~~----p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          223 PFEAEN------EDD-LFEAILNDEV------VY----PTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             SSCCSS------HHH-HHHHHHHCCC------CC----CTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCCC------HHH-HHHHHHcCCC------CC----CCCCCHHHHHHHHHHhhhCHHHccCC
Confidence            997432      111 2222222221      01    1111234556777999999 999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.43  E-value=3.1e-13  Score=107.58  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=98.4

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|..++..+ +           .+.+..|+||||+++|+|.+++....   .+++.....++.++         
T Consensus        60 ~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~  136 (345)
T 1xjd_A           60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHS  136 (345)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            345688899998876 3           67788999999999999999998643   47888887777776         


Q ss_pred             ------------------------CC-------CCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------LA-------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +-       ..........||+.|+|||.+.+..++.++          |++||..
T Consensus       137 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  216 (345)
T 1xjd_A          137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS  216 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCC
Confidence                                    00       011123456799999999999998888888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +......+..      .+....    ...+.++...||+.+ .+||+.
T Consensus       217 Pf~~~~------~~~-~~~~i~~~~~------~~p~~~----s~~~~~li~~lL~~dp~~R~~~  263 (345)
T 1xjd_A          217 PFHGQD------EEE-LFHSIRMDNP------FYPRWL----EKEAKDLLVKLFVREPEKRLGV  263 (345)
T ss_dssp             SSCCSS------HHH-HHHHHHHCCC------CCCTTS----CHHHHHHHHHHSCSSGGGSBTT
T ss_pred             CCCCCC------HHH-HHHHHHhCCC------CCCccc----CHHHHHHHHHHhcCCHhHcCCC
Confidence            997432      111 1222222211      111112    234567777999999 999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.43  E-value=8.5e-15  Score=115.47  Aligned_cols=141  Identities=12%  Similarity=0.260  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           49 NKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      ..|.+|+.++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++             
T Consensus        60 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~iv  137 (325)
T 3kex_A           60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEHGMV  137 (325)
T ss_dssp             CSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            46789999999887          556779999999999999999987533  47788887777776             


Q ss_pred             --------------------C---------CCCccccccccCCcCccCccccccCCCCcce----------eEec-CCCC
Q 048710          106 --------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKP  145 (208)
Q Consensus       106 --------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p  145 (208)
                                          +         ...........||.+|+|||.+.+..++.++          |++| |..|
T Consensus       138 H~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             CSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence                                0         0011112345578899999999988899888          9999 9999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....   ..+    ......+....  .       +......+.+++..||+.+ .+|||+
T Consensus       218 ~~~~~~---~~~----~~~~~~~~~~~--~-------~~~~~~~~~~li~~~l~~dp~~Rps~  264 (325)
T 3kex_A          218 YAGLRL---AEV----PDLLEKGERLA--Q-------PQICTIDVYMVMVKCWMIDENIRPTF  264 (325)
T ss_dssp             TTTSCT---THH----HHHHHTTCBCC--C-------CTTBCTTTTHHHHHHTCSCTTTSCCH
T ss_pred             ccccCH---HHH----HHHHHcCCCCC--C-------CCcCcHHHHHHHHHHcCCChhhCcCH
Confidence            974321   112    22222221110  0       0111123457888999999 999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.43  E-value=2.2e-13  Score=117.38  Aligned_cols=141  Identities=14%  Similarity=0.149  Sum_probs=100.6

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|..++..+.            .+.+.+||||||+++|+|.++|+...   .+++.....++.++         
T Consensus       384 ~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~  460 (674)
T 3pfq_A          384 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQS  460 (674)
T ss_dssp             TTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3467889999999874            66788999999999999999998654   48888888777777         


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +       ...........||+.|+|||++.+..++.++          |++||+.
T Consensus       461 ~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~  540 (674)
T 3pfq_A          461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA  540 (674)
T ss_dssp             TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCC
Confidence                                    0       0111223456799999999999999999888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +...+..+.+          ..+......+.+++..||+.+ .+||+.
T Consensus       541 Pf~~~~------~~~-~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          541 PFEGED------EDE-LFQSIMEHNV----------AYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             SSCCSS------HHH-HHHHHHSSCC----------CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CCCCCC------HHH-HHHHHHhCCC----------CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence            997432      112 2222222221          111112234567777999999 999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.42  E-value=4.4e-13  Score=105.79  Aligned_cols=146  Identities=11%  Similarity=0.091  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..|.+|+.++.++ +           ...+..++||||+ +|+|.+++.....  .+++.....++.++           
T Consensus        49 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~  125 (330)
T 2izr_A           49 PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSKN  125 (330)
T ss_dssp             CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4689999999999 4           5677889999999 9999999986533  58999999888888           


Q ss_pred             -------------CCCC--------------cc--------------ccccccCCcCccCccccccCCCCcce-------
Q 048710          106 -------------LADQ--------------TY--------------MTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -------------~~~~--------------~~--------------~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                   ..+.              ..              ......||+.|+|||.+.+..++.++       
T Consensus       126 iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  205 (330)
T 2izr_A          126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGH  205 (330)
T ss_dssp             EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHH
Confidence                         0000              00              01345689999999999998888888       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++||+.||......   .+........ ...... ..+.+...    .+ .+.+++..||+.+ .+||++
T Consensus       206 il~ell~g~~Pf~~~~~~---~~~~~~~~i~-~~~~~~-~~~~~~~~----~p-~~~~li~~~l~~~p~~RP~~  269 (330)
T 2izr_A          206 MFMYFLRGSLPWQGLKAD---TLKERYQKIG-DTKRAT-PIEVLCEN----FP-EMATYLRYVRRLDFFEKPDY  269 (330)
T ss_dssp             HHHHHHHSSCTTTTCCCS---SHHHHHHHHH-HHHHHS-CHHHHTTT----CH-HHHHHHHHHHHCCTTCCCCH
T ss_pred             HHHHHhcCCCCccccccc---cHHHHHHHHH-hhhccC-CHHHHhcc----Ch-HHHHHHHHHHhCCCCCCCCH
Confidence               999999999854222   2222222111 111000 00001111    12 6778888999999 999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.42  E-value=8.4e-13  Score=105.68  Aligned_cols=96  Identities=10%  Similarity=0.185  Sum_probs=72.0

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.+|+++|..+.            .+.+..||||||+++|+|.+++.      .+++.+...++.++         
T Consensus        62 ~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~  135 (361)
T 4f9c_A           62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ  135 (361)
T ss_dssp             CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999874            67889999999999999999995      37777777777766         


Q ss_pred             ---------------CCC----------Cc-----------------------------------cccccccCCcCccCc
Q 048710          106 ---------------LAD----------QT-----------------------------------YMTTQVQGTFGYLDL  125 (208)
Q Consensus       106 ---------------~~~----------~~-----------------------------------~~~~~~~gt~~y~aP  125 (208)
                                     ..+          .+                                   ......+||+.||||
T Consensus       136 ~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP  215 (361)
T 4f9c_A          136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAP  215 (361)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCH
T ss_pred             CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCH
Confidence                           000          00                                   011234699999999


Q ss_pred             cccccC-CCCcce----------eEecCCCCCCC
Q 048710          126 QYFQSS-PFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       126 E~~~~~-~~~~ks----------E~~tg~~p~~~  148 (208)
                      |++.+. .++.++          |++||+.||..
T Consensus       216 E~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          216 EVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             HHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             HHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            999875 477776          99999999963

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.42  E-value=4.8e-14  Score=112.02  Aligned_cols=145  Identities=12%  Similarity=0.134  Sum_probs=94.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ......|.+|+.++.+++             .+.+..++||| +.+|+|.+++....   .+++..+..++.++      
T Consensus        48 ~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~  123 (343)
T 3dbq_A           48 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHT  123 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHH
Confidence            344578999999999885             67788999999 57899999998753   58888888888877      


Q ss_pred             --------------------------CCC---------CccccccccCCcCccCcccccc-----------CCCCcce--
Q 048710          106 --------------------------LAD---------QTYMTTQVQGTFGYLDLQYFQS-----------SPFTEKS--  137 (208)
Q Consensus       106 --------------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~ks--  137 (208)
                                                +-+         .........||+.|+|||++.+           ..++.++  
T Consensus       124 lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di  203 (343)
T 3dbq_A          124 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV  203 (343)
T ss_dssp             HHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHH
T ss_pred             HHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhH
Confidence                                      000         0011234579999999999865           5667677  


Q ss_pred             --------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |++||+.||....     ...........         +......+......+.+++..||+.+ .+|||+
T Consensus       204 wslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~  268 (343)
T 3dbq_A          204 WSLGCILYYMTYGKTPFQQII-----NQISKLHAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI  268 (343)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhc---------CCcccCCcccCCHHHHHHHHHHcCCChhHCCCH
Confidence                    9999999997321     11121222221         11111111111234567788999999 999996

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.42  E-value=9.6e-13  Score=101.85  Aligned_cols=146  Identities=15%  Similarity=0.271  Sum_probs=97.6

Q ss_pred             chhhHHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+.|.+|+.++.+++               ...+..++||||+++|+|.+++....   .+++.....++.++   
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~  141 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKG  141 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHH
Confidence            3445678999999999998               23566899999999999999998643   47888887777766   


Q ss_pred             -----------------------C-CC--------------CccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 -----------------------L-AD--------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 -----------------------~-~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                             . .+              .........||+.|+|||.+.+ .++.++          
T Consensus       142 l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~  220 (290)
T 1t4h_A          142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCML  220 (290)
T ss_dssp             HHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHH
Confidence                                   0 00              0011124568999999998864 577777          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||....     .... .......+.....++.    ..    ...+.+++..||+.+ ++|||+
T Consensus       221 ~l~~g~~pf~~~~-----~~~~-~~~~~~~~~~~~~~~~----~~----~~~l~~li~~~l~~dp~~Rps~  277 (290)
T 1t4h_A          221 EMATSEYPYSECQ-----NAAQ-IYRRVTSGVKPASFDK----VA----IPEVKEIIEGCIRQNKDERYSI  277 (290)
T ss_dssp             HHHHSSCTTTTCS-----SHHH-HHHHHTTTCCCGGGGG----CC----CHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHhCCCCCCCcC-----cHHH-HHHHHhccCCccccCC----CC----CHHHHHHHHHHccCChhhCCCH
Confidence            9999999997421     1111 2222222221111111    11    134667888999999 999986

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.41  E-value=6.1e-14  Score=113.41  Aligned_cols=145  Identities=12%  Similarity=0.125  Sum_probs=95.1

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ......|.+|+.+|.+++             ...+..|+||| +.+|+|.+++....   .+++..+..++.++      
T Consensus        95 ~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~  170 (390)
T 2zmd_A           95 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHT  170 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHH
Confidence            445678999999999884             56778999999 67899999998654   57888887777777      


Q ss_pred             --------------------------CCCC---------ccccccccCCcCccCcccccc-----------CCCCcce--
Q 048710          106 --------------------------LADQ---------TYMTTQVQGTFGYLDLQYFQS-----------SPFTEKS--  137 (208)
Q Consensus       106 --------------------------~~~~---------~~~~~~~~gt~~y~aPE~~~~-----------~~~~~ks--  137 (208)
                                                +-+.         ........||+.|+|||++.+           ..++.++  
T Consensus       171 lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di  250 (390)
T 2zmd_A          171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDV  250 (390)
T ss_dssp             HHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHH
T ss_pred             HHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhH
Confidence                                      0000         011234569999999999865           3566666  


Q ss_pred             --------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |++||+.||....     .....+.....         +......+......+.+++..||+.+ .+|||+
T Consensus       251 wSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~  315 (390)
T 2zmd_A          251 WSLGCILYYMTYGKTPFQQII-----NQISKLHAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI  315 (390)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhC---------ccccCCCCccchHHHHHHHHHHcccChhhCCCH
Confidence                    9999999997321     11122222221         11111111111234567788999999 999986

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.41  E-value=4.4e-14  Score=111.34  Aligned_cols=145  Identities=14%  Similarity=0.219  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHHH
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLHI  101 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~i  101 (208)
                      ..+.|.+|+.++.++ +           .+.+..++||||+++|+|.+++....             ....+++.....+
T Consensus        68 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (327)
T 1fvr_A           68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF  147 (327)
T ss_dssp             --CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHH
Confidence            446799999999999 4           66788999999999999999998653             1225889988888


Q ss_pred             HHhC---------------------------------CCCC------ccccccccCCcCccCccccccCCCCcce-----
Q 048710          102 VVDS---------------------------------LADQ------TYMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       102 ~~~i---------------------------------~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +.++                                 +-+.      ........+|+.|+|||.+.+..++.++     
T Consensus       148 ~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHH
Confidence            8887                                 0000      0111233467899999999888888887     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++| |..||....      ... +......+..     ...    +......+.+++.+||+.+ .+|||+
T Consensus       228 G~il~ellt~g~~pf~~~~------~~~-~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~  288 (327)
T 1fvr_A          228 GVLLWEIVSLGGTPYCGMT------CAE-LYEKLPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSF  288 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTCC------HHH-HHHHGGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHcCCCCCCCCCc------HHH-HHHHhhcCCC-----CCC----CCCCCHHHHHHHHHHccCChhhCcCH
Confidence                 9998 999987432      111 2222222211     111    1122245667888999999 999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.41  E-value=6e-14  Score=110.66  Aligned_cols=143  Identities=15%  Similarity=0.167  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.+.+|+.++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        49 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           49 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356899999999988           67788999999999999999997643   48888888888877           


Q ss_pred             ----------------------CCCC---------ccccccccCCcCccCccccccCCC-Ccce----------eEecCC
Q 048710          106 ----------------------LADQ---------TYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------------~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~  143 (208)
                                            +-+.         ........||+.|+|||.+.+..+ +.++          |++||+
T Consensus       126 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  205 (323)
T 3tki_A          126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  205 (323)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence                                  0000         111234578999999999987765 5555          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.......    .. ..........   .++      .......+.+++.+||+.+ ++|||+
T Consensus       206 ~pf~~~~~~~----~~-~~~~~~~~~~---~~~------~~~~~~~~~~li~~~L~~dP~~R~t~  256 (323)
T 3tki_A          206 LPWDQPSDSC----QE-YSDWKEKKTY---LNP------WKKIDSAPLALLHKILVENPSARITI  256 (323)
T ss_dssp             CSCSSSCTTS----HH-HHHHHTTCTT---STT------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCchHH----HH-HHHHhccccc---CCc------cccCCHHHHHHHHHHccCChhhCcCH
Confidence            9997432111    11 1111111111   010      0112234567788999999 999986

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.41  E-value=5.5e-13  Score=105.20  Aligned_cols=147  Identities=17%  Similarity=0.262  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.+|+.++.+++            .+.+..++||||+++|+|.+++...... .+++.....++.++         
T Consensus        71 ~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~ql~~~L~~LH~  149 (327)
T 3lm5_A           71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQ  149 (327)
T ss_dssp             CHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-C-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999886            6778899999999999999999764333 68999888888877         


Q ss_pred             ---------------CC---C---------------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ---------------LA---D---------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------~~---~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                     ..   +               .........||+.|+|||.+.+..++.++          |++||
T Consensus       150 ~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  229 (327)
T 3lm5_A          150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH  229 (327)
T ss_dssp             TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhC
Confidence                           00   0               00111234689999999999988888888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....      ......... .... . ..+    .........+.+++..||+.+ .+|||+
T Consensus       230 ~~pf~~~~------~~~~~~~i~-~~~~-~-~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~  282 (327)
T 3lm5_A          230 TSPFVGED------NQETYLNIS-QVNV-D-YSE----ETFSSVSQLATDFIQSLLVKNPEKRPTA  282 (327)
T ss_dssp             SCSSCCSS------HHHHHHHHH-HTCC-C-CCT----TTTTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCCCC------chHHHHHHH-hccc-c-cCc----hhhcccCHHHHHHHHHHcCCChhhCcCH
Confidence            99997432      111111111 1111 0 011    111122334667888999999 999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.41  E-value=1.1e-13  Score=109.16  Aligned_cols=152  Identities=15%  Similarity=0.204  Sum_probs=97.3

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....+.|.+|++++.+++             .+.+..++|+||+++|+|.+++.....  .+++.....++.++      
T Consensus        83 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~  160 (326)
T 2w1i_A           83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEY  160 (326)
T ss_dssp             SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHH
Confidence            344578999999999988             223478999999999999999987543  58899888888877      


Q ss_pred             ---------------------------CCCCc----------cccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 ---------------------------LADQT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 ---------------------------~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                 +-+..          .......+|..|+|||.+.+..++.++          |
T Consensus       161 LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  240 (326)
T 2w1i_A          161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  240 (326)
T ss_dssp             HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             HHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHH
Confidence                                       00000          011233467789999999888888777          9


Q ss_pred             EecCCCCCCCCCc---------cCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTY---------EENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~---------~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||..|+.....         .........+......+.         ....+......+.+++.+||+.+ ++|||+
T Consensus       241 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  310 (326)
T 2w1i_A          241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSF  310 (326)
T ss_dssp             HHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCH
Confidence            9999988763200         000000111111121111         11112223346778888999999 999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.41  E-value=2.1e-13  Score=108.69  Aligned_cols=146  Identities=15%  Similarity=0.201  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..|+||||+++|+|.+++.... ....+++.....++.++          
T Consensus        70 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (351)
T 3c0i_A           70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN  149 (351)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            567999999999988           66788999999999999999886532 22257888887777776          


Q ss_pred             --------------CC-C------------------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 --------------LA-D------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~~-~------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                    .. +                  .........||+.|+|||.+.+..++.++          |++||
T Consensus       150 ~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  229 (351)
T 3c0i_A          150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG  229 (351)
T ss_dssp             TEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHC
Confidence                          00 0                  00112345689999999999988888888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||....        ..+......+...  .++.....    ....+.+++.+||+.+ ++|||+
T Consensus       230 ~~pf~~~~--------~~~~~~i~~~~~~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~  281 (351)
T 3c0i_A          230 CLPFYGTK--------ERLFEGIIKGKYK--MNPRQWSH----ISESAKDLVRRMLMLDPAERITV  281 (351)
T ss_dssp             SCSSCSSH--------HHHHHHHHHTCCC--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCcH--------HHHHHHHHcCCCC--CCcccccc----CCHHHHHHHHHHCCCChhHCcCH
Confidence            99997421        1122222222211  01111111    1235567788999999 999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.41  E-value=8.3e-14  Score=109.07  Aligned_cols=146  Identities=16%  Similarity=0.179  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           46 GKVNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      .....|.+|+.++.+++               ......|+||||+++|+|.++++...   .+++.....++.++     
T Consensus        54 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~  130 (311)
T 3ork_A           54 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALN  130 (311)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHH
Confidence            34567999999999888               11123599999999999999998643   58888888888877     


Q ss_pred             ----------------------------CCCC----------ccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 ----------------------------LADQ----------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 ----------------------------~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                  +-+.          ........||+.|+|||.+.+..++.++          
T Consensus       131 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  210 (311)
T 3ork_A          131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY  210 (311)
T ss_dssp             HHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHH
Confidence                                        0000          0111234589999999999998888888          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||....      ................   .....    .....+.+++..||+.+ .+||+.
T Consensus       211 ~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~---~~~~~----~~~~~l~~li~~~l~~dP~~R~~~  268 (311)
T 3ork_A          211 EVLTGEPPFTGDS------PVSVAYQHVREDPIPP---SARHE----GLSADLDAVVLKALAKNPENRYQT  268 (311)
T ss_dssp             HHHHSSCSCCCSS------HHHHHHHHHHCCCCCH---HHHST----TCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred             HHHhCCCCCCCCC------hHHHHHHHhcCCCCCc---ccccC----CCCHHHHHHHHHHHhcCHhhChhh
Confidence            9999999997432      1222223332221110   00001    12235667888999999 999975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.40  E-value=6.7e-14  Score=107.23  Aligned_cols=141  Identities=18%  Similarity=0.289  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|++++.+++           ...+..++||||+++|+|.+++.+.    .+++.....++.++           
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           50 IENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467999999999988           6677899999999999999999643    57888888877776           


Q ss_pred             ----------------CC--------CC--------------ccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 ----------------LA--------DQ--------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 ----------------~~--------~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                      ..        +.              ........||+.|+|||.+.+..++.++          
T Consensus       126 ~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  205 (271)
T 3dtc_A          126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLW  205 (271)
T ss_dssp             SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             CCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHH
Confidence                            00        00              0001134589999999999988888888          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||....      ......... .+...    ..+    +......+.+++.+||+.+ ++|||+
T Consensus       206 ~l~~g~~p~~~~~------~~~~~~~~~-~~~~~----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~  261 (271)
T 3dtc_A          206 ELLTGEVPFRGID------GLAVAYGVA-MNKLA----LPI----PSTCPEPFAKLMEDCWNPDPHSRPSF  261 (271)
T ss_dssp             HHHHCCCTTTTSC------HHHHHHHHH-TSCCC----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHhCCCCCCCCC------HHHHHHhhh-cCCCC----CCC----CcccCHHHHHHHHHHhcCCcccCcCH
Confidence            9999999997432      111111111 11111    111    1222345677888999999 999996

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.40  E-value=5.9e-14  Score=109.83  Aligned_cols=147  Identities=15%  Similarity=0.192  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCC-------------CCCCHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEE-------------FPIAWEMQL   99 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~-------------~~l~~~~r~   99 (208)
                      ...+.|.+|+.++.+++             ...+..++|+||+++|+|.+++......             ..+++....
T Consensus        72 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (316)
T 2xir_A           72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI  151 (316)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHH
Confidence            34568999999999984             3345689999999999999999875421             127888888


Q ss_pred             HHHHhC---------------------------------CC---------CCccccccccCCcCccCccccccCCCCcce
Q 048710          100 HIVVDS---------------------------------LA---------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       100 ~i~~~i---------------------------------~~---------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .++.++                                 +-         ..........||+.|+|||.+.+..++.++
T Consensus       152 ~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  231 (316)
T 2xir_A          152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  231 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchh
Confidence            888777                                 00         000112234568899999999988888888


Q ss_pred             ----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          138 ----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       138 ----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                                |++| |..||......      ..+......+...     .....    ....+.+++.+||+.+ .+||
T Consensus       232 Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rp  296 (316)
T 2xir_A          232 DVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRM-----RAPDY----TTPEMYQTMLDCWHGEPSQRP  296 (316)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCCS------HHHHHHHHHTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHHhCCCCCCcccchh------HHHHHHhccCccC-----CCCCC----CCHHHHHHHHHHcCCChhhCc
Confidence                      9998 99998743211      1122222222111     11111    2235667888999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       297 s~  298 (316)
T 2xir_A          297 TF  298 (316)
T ss_dssp             CH
T ss_pred             CH
Confidence            86

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.40  E-value=2.8e-14  Score=112.11  Aligned_cols=146  Identities=16%  Similarity=0.242  Sum_probs=99.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------CCCCCCHHHHHHHHHhC--
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-------EEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------~~~~l~~~~r~~i~~~i--  105 (208)
                      .....|.+|+.++.+++           .+.+..++||||+++|+|.+++....       ....+++....+++.++  
T Consensus        70 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  149 (322)
T 1p4o_A           70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD  149 (322)
T ss_dssp             HHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence            34567999999999988           56778999999999999999997532       11257888888888777  


Q ss_pred             -------------------------------CCCCc---------cccccccCCcCccCccccccCCCCcce--------
Q 048710          106 -------------------------------LADQT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 -------------------------------~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                                                     +-+..         .......||+.|+|||.+.+..++.++        
T Consensus       150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  229 (322)
T 1p4o_A          150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  229 (322)
T ss_dssp             HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHH
Confidence                                           00000         011223457889999999888888888        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++| |..|+....      ... +......+....         .+......+.+++.+||+.+ .+|||+
T Consensus       230 l~el~~~g~~p~~~~~------~~~-~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~  287 (322)
T 1p4o_A          230 LWEIATLAEQPYQGLS------NEQ-VLRFVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSF  287 (322)
T ss_dssp             HHHHHHTSCCTTTTSC------HHH-HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHhcCCCccccCC------HHH-HHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence              9999 888887431      111 222222332211         11122345667888999999 999986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.40  E-value=6.5e-13  Score=102.60  Aligned_cols=144  Identities=22%  Similarity=0.403  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHhhcc---------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------
Q 048710           49 NKLINEVVILSQIN---------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~---------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------  105 (208)
                      +.|.+|+.++.+++         ...+..++||||+++|+|.+++.+...  .+++..+..++.++              
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~i  145 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQNPPI  145 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCCeEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            67999999999998         222333799999999999999987544  58999888888776              


Q ss_pred             ------------CCCC------------------ccccccccCCcCccCccccc--cCCCCcce----------eEecCC
Q 048710          106 ------------LADQ------------------TYMTTQVQGTFGYLDLQYFQ--SSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ------------~~~~------------------~~~~~~~~gt~~y~aPE~~~--~~~~~~ks----------E~~tg~  143 (208)
                                  ..+.                  ........||+.|+|||.+.  ...++.++          |++||+
T Consensus       146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~  225 (287)
T 4f0f_A          146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE  225 (287)
T ss_dssp             BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             ecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence                        0000                  00112356899999999984  45566666          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....    .-..........+ .    .+.+....    ...+.+++..||+.+ .+|||+
T Consensus       226 ~pf~~~~~----~~~~~~~~~~~~~-~----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~  277 (287)
T 4f0f_A          226 GPFDEYSY----GKIKFINMIREEG-L----RPTIPEDC----PPRLRNVIELCWSGDPKKRPHF  277 (287)
T ss_dssp             CTTTTCCC----CHHHHHHHHHHSC-C----CCCCCTTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCccccc----cHHHHHHHHhccC-C----CCCCCccc----CHHHHHHHHHHhcCChhhCcCH
Confidence            99974321    1111122222221 1    11122222    345677888999999 999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.40  E-value=1.3e-14  Score=111.69  Aligned_cols=144  Identities=15%  Similarity=0.266  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..+.|.+|++++.+++            ...+..++|+||+++|+|.+++...... .+++.....++.++         
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~  135 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG  135 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHh
Confidence            4568999999999988            3445789999999999999999764321 37788887777776         


Q ss_pred             ---------------CCC---------C----ccccccccCCcCccCccccccCCCCcce----------eEec-CCCCC
Q 048710          106 ---------------LAD---------Q----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPI  146 (208)
Q Consensus       106 ---------------~~~---------~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~  146 (208)
                                     ..+         .    ........+|..|+|||.+.+..++.++          |++| |+.||
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~  215 (278)
T 1byg_A          136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  215 (278)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             CCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCC
Confidence                           000         0    0011234568899999999888888888          9998 99998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....   ..+    ......+.     .+....    .....+.+++..||+.+ ++|||+
T Consensus       216 ~~~~~---~~~----~~~~~~~~-----~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~  261 (278)
T 1byg_A          216 PRIPL---KDV----VPRVEKGY-----KMDAPD----GCPPAVYEVMKNCWHLDAAMRPSF  261 (278)
T ss_dssp             TTSCG---GGH----HHHHTTTC-----CCCCCT----TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCH---HHH----HHHHhcCC-----CCCCcc----cCCHHHHHHHHHHhcCChhhCCCH
Confidence            74321   111    11222221     111111    22345667888999999 999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.40  E-value=7e-13  Score=102.19  Aligned_cols=147  Identities=17%  Similarity=0.191  Sum_probs=100.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.+.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++        
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH  122 (284)
T 3kk8_A           46 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH  122 (284)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            344577999999999998           67788899999999999999987643   58888888887777        


Q ss_pred             ----------------CC-C-----------------CccccccccCCcCccCccccccCCCCcce----------eEec
Q 048710          106 ----------------LA-D-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT  141 (208)
Q Consensus       106 ----------------~~-~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t  141 (208)
                                      .. +                 .........||+.|+|||.+.+..++.++          |++|
T Consensus       123 ~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  202 (284)
T 3kk8_A          123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  202 (284)
T ss_dssp             HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH
Confidence                            00 0                 01111235689999999999988888888          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |..||....      ... .......+... ...+. ....    ...+.+++..||+.+ ++|||+
T Consensus       203 g~~pf~~~~------~~~-~~~~~~~~~~~-~~~~~-~~~~----~~~~~~li~~~l~~dp~~Rps~  256 (284)
T 3kk8_A          203 GYPPFWDED------QHR-LYAQIKAGAYD-YPSPE-WDTV----TPEAKSLIDSMLTVNPKKRITA  256 (284)
T ss_dssp             SSCSSCCSS------HHH-HHHHHHHTCCC-CCTTT-TTTS----CHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCCCc------hhH-HHHHHHhcccc-CCchh-hccc----CHHHHHHHHHHcccChhhCCCH
Confidence            999997431      111 11222222111 01110 0112    234567788999999 999986

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.40  E-value=6e-13  Score=104.60  Aligned_cols=144  Identities=16%  Similarity=0.235  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++           
T Consensus        59 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~  135 (321)
T 2a2a_A           59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKK  135 (321)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567999999999988           66788999999999999999998643   58888888888877           


Q ss_pred             -------------CCCC-------------------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   ..+.                   ........||+.|+|||.+.+..++.++          |++||.
T Consensus       136 ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  215 (321)
T 2a2a_A          136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  215 (321)
T ss_dssp             EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred             eecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCC
Confidence                         1010                   0011234589999999999988888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ....... ......  -.++.+....    ...+.++...||+.+ ++|||+
T Consensus       216 ~pf~~~~------~~~~~~~-i~~~~~--~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~  267 (321)
T 2a2a_A          216 SPFLGDT------KQETLAN-ITSVSY--DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTI  267 (321)
T ss_dssp             CSSCCSS------HHHHHHH-HHTTCC--CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCH
T ss_pred             CCCCCCC------HHHHHHH-HHhccc--ccChhhhccc----CHHHHHHHHHHcCCChhhCcCH
Confidence            9997431      1111221 211111  0111111112    234567788999999 999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.40  E-value=9.8e-13  Score=102.90  Aligned_cols=140  Identities=16%  Similarity=0.112  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           ...+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        78 ~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~  154 (309)
T 2h34_A           78 RTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAAG  154 (309)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            478999999999988           56788999999999999999998643   58888888888877           


Q ss_pred             -------------CCC-----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -------------LAD-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                   ..+                 .........||+.|+|||.+.+..++.++          |++||+.|
T Consensus       155 i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  234 (309)
T 2h34_A          155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP  234 (309)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCS
T ss_pred             CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCC
Confidence                         000                 00111244689999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCc-ccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDR-LFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      |....       ...+........ .....        +......+.+++..||+.+ ++||
T Consensus       235 f~~~~-------~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dP~~Rp  281 (309)
T 2h34_A          235 YQGDQ-------LSVMGAHINQAIPRPSTV--------RPGIPVAFDAVIARGMAKNPEDRY  281 (309)
T ss_dssp             SCSCH-------HHHHHHHHHSCCCCGGGT--------STTCCTHHHHHHHHHTCSSGGGSC
T ss_pred             CCCch-------HHHHHHHhccCCCCcccc--------CCCCCHHHHHHHHHhccCCHHHHH
Confidence            97421       112222222211 11111        1122235667888999999 9999

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.40  E-value=7.9e-13  Score=103.29  Aligned_cols=150  Identities=19%  Similarity=0.232  Sum_probs=97.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-------  105 (208)
                      ......|.+|+.++.+++           ...+..++||||+++|+|.+++.... ....+++.....++.++       
T Consensus        73 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  152 (310)
T 2wqm_A           73 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM  152 (310)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            345678999999999988           56788999999999999999997521 11258888888887777       


Q ss_pred             -----------------CCC----------------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 -----------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -----------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                       ..+                .........||..|+|||.+.+..++.++          |++||
T Consensus       153 H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g  232 (310)
T 2wqm_A          153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  232 (310)
T ss_dssp             HHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence                             000                01111234689999999999988888888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||...    ......... ............    ...    ...+.+++.+||+.+ ++|||+
T Consensus       233 ~~p~~~~----~~~~~~~~~-~~~~~~~~~~~~----~~~----~~~l~~li~~~l~~dp~~Rps~  285 (310)
T 2wqm_A          233 QSPFYGD----KMNLYSLCK-KIEQCDYPPLPS----DHY----SEELRQLVNMCINPDPEKRPDV  285 (310)
T ss_dssp             SCTTC-------CCHHHHHH-HHHTTCSCCCCT----TTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCccc----chhHHHHHH-HhhcccCCCCcc----ccc----CHHHHHHHHHHcCCChhhCCCH
Confidence            9998632    112222222 222222221111    112    235667888999999 999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.40  E-value=1.4e-13  Score=107.00  Aligned_cols=141  Identities=14%  Similarity=0.196  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           48 VNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .+.|.+|+.++.+++             ...+..++||||+++|+|.+++...    .+++.....++.++         
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~  155 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHY  155 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999998             2367899999999999999876532    58888888888877         


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCC---Ccce----------eEec
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPF---TEKS----------NLLT  141 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~ks----------E~~t  141 (208)
                                              +       ...........||+.|+|||.+.+...   +.++          |++|
T Consensus       156 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~  235 (298)
T 2zv2_A          156 QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF  235 (298)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHH
Confidence                                    0       001111234578999999999976542   4454          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....      ... +......+....   +. ...    ....+.+++.+||+.+ ++|||+
T Consensus       236 g~~pf~~~~------~~~-~~~~~~~~~~~~---~~-~~~----~~~~l~~li~~~l~~dp~~R~s~  287 (298)
T 2zv2_A          236 GQCPFMDER------IMC-LHSKIKSQALEF---PD-QPD----IAEDLKDLITRMLDKNPESRIVV  287 (298)
T ss_dssp             SSCSSCCSS------HHH-HHHHHHHCCCCC---CS-SSC----CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             CCCCCCCcc------HHH-HHHHHhcccCCC---CC-ccc----cCHHHHHHHHHHhhcChhhCCCH
Confidence            999997421      111 112222221110   00 011    2234667788999999 999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.39  E-value=2.5e-14  Score=110.09  Aligned_cols=147  Identities=20%  Similarity=0.269  Sum_probs=99.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC-----
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i-----  105 (208)
                      ....+.|.+|+.++.+++             ...+..++||||+++|+|.+++.... ....+++.....++.++     
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~  125 (279)
T 2w5a_A           46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK  125 (279)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHH
Confidence            445678999999999988             34578999999999999999997532 12248888888877765     


Q ss_pred             -----C-------------------CCC----------------ccccccccCCcCccCccccccCCCCcce--------
Q 048710          106 -----L-------------------ADQ----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 -----~-------------------~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                           .                   .+.                ........||..|+|||.+.+..++.++        
T Consensus       126 ~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  205 (279)
T 2w5a_A          126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL  205 (279)
T ss_dssp             HHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHH
T ss_pred             HHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHH
Confidence                 0                   000                0001234588999999999988888887        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++||+.||....      . ..+......+...     .+...+    ...+.+++.+||+.+ .+|||+
T Consensus       206 l~~l~~g~~p~~~~~------~-~~~~~~i~~~~~~-----~~~~~~----~~~l~~li~~~l~~~p~~Rps~  262 (279)
T 2w5a_A          206 LYELCALMPPFTAFS------Q-KELAGKIREGKFR-----RIPYRY----SDELNEIITRMLNLKDYHRPSV  262 (279)
T ss_dssp             HHHHHHSSCSSCCSS------H-HHHHHHHHHTCCC-----CCCTTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHCCCCCcccC------H-HHHHHHHhhcccc-----cCCccc----CHHHHHHHHHHcCCCcccCCCH
Confidence              9999999987432      1 1122223333221     111122    235667888999999 999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.39  E-value=4.9e-13  Score=114.33  Aligned_cols=160  Identities=13%  Similarity=0.161  Sum_probs=100.8

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-
Q 048710           44 YEGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-  105 (208)
                      .......|.+|+.++.+++                 ...+..++||||+++|+|.+++........+++.....++.++ 
T Consensus        52 ~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl  131 (676)
T 3qa8_A           52 SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS  131 (676)
T ss_dssp             CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence            3445678999999999998                 1267789999999999999999875543357777777777766 


Q ss_pred             -----------------------C-CC-----------------CccccccccCCcCccCccccccCCCCcce-------
Q 048710          106 -----------------------L-AD-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -----------------------~-~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                             . .+                 .........||.+|+|||.+.+..++.++       
T Consensus       132 ~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGv  211 (676)
T 3qa8_A          132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT  211 (676)
T ss_dssp             HHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHH
T ss_pred             HHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHH
Confidence                                   0 00                 01112345689999999999999999888       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcC----cccccc------cccc--cccCcHHHHHHHHHHHHHhhcCC-
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKED----RLFEIF------DGLV--LKEGGKDEIVVVVKLKKRCLNLN-  201 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~------d~~l--~~~~~~~~~~~~~~l~~~C~~~~-  201 (208)
                         |++||..||....     ....|.......+    ...+..      ...+  ....+......+.++...||+.+ 
T Consensus       212 iLyeLltG~~Pf~~~~-----~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP  286 (676)
T 3qa8_A          212 LAFECITGFRPFLPNW-----QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQ  286 (676)
T ss_dssp             HHHHHHSSCSSCCSSC-----HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSC
T ss_pred             HHHHHHHCCCCCCccc-----chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCH
Confidence               9999999986321     1111110000000    000000      0111  11122345567778888999999 


Q ss_pred             CCCCCCC
Q 048710          202 EKKPTMR  208 (208)
Q Consensus       202 ~~RPsm~  208 (208)
                      .+|||..
T Consensus       287 ~kRPTa~  293 (676)
T 3qa8_A          287 RQRGTDP  293 (676)
T ss_dssp             C---CCT
T ss_pred             hhCcCHH
Confidence            9999973

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.39  E-value=1.5e-12  Score=102.53  Aligned_cols=139  Identities=12%  Similarity=0.212  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.+.+|..++..++           .+.+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        50 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~  126 (318)
T 1fot_A           50 VEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSKD  126 (318)
T ss_dssp             HHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467889999999887           67788999999999999999998643   47787777776666           


Q ss_pred             ----------------------CCCC----ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          106 ----------------------LADQ----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       106 ----------------------~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                                            +-+.    ........||+.|+|||.+.+..++.++          |++||..||...
T Consensus       127 ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  206 (318)
T 1fot_A          127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS  206 (318)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence                                  0000    1112346799999999999998888888          999999999743


Q ss_pred             CccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          150 TYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       150 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      .      ......... .+.+      .+....+    ..+.++..+|++.+ .+||+
T Consensus       207 ~------~~~~~~~i~-~~~~------~~p~~~~----~~~~~li~~lL~~dp~~R~~  247 (318)
T 1fot_A          207 N------TMKTYEKIL-NAEL------RFPPFFN----EDVKDLLSRLITRDLSQRLG  247 (318)
T ss_dssp             S------HHHHHHHHH-HCCC------CCCTTSC----HHHHHHHHHHTCSCTTTCTT
T ss_pred             C------HHHHHHHHH-hCCC------CCCCCCC----HHHHHHHHHHhccCHHHcCC
Confidence            1      112222222 2211      1111122    34567777999999 99993

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.39  E-value=1.9e-13  Score=106.34  Aligned_cols=150  Identities=17%  Similarity=0.230  Sum_probs=97.8

Q ss_pred             hHHHHHHHHHHHhhcc-----------c--CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-----------L--ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~--~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|+.++.+++           .  ..+..++||||+++|+|.+++.....  .+++..+..++.++        
T Consensus        66 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH  143 (302)
T 4e5w_A           66 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLG  143 (302)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhh
Confidence            3468999999999988           2  23668999999999999999965443  58899888888877        


Q ss_pred             -------------------------CCCCc----------cccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -------------------------LADQT----------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------------------~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                               +-+.+          .......||..|+|||.+.+..++.++          |++
T Consensus       144 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  223 (302)
T 4e5w_A          144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL  223 (302)
T ss_dssp             HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             cCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHH
Confidence                                     00000          112345578889999999888888777          999


Q ss_pred             cCCCCCCCCC--------ccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTT--------YEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..|+....        +.........+......+.         ....+......+.+++..||+.+ .+|||+
T Consensus       224 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  290 (302)
T 4e5w_A          224 TYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSF  290 (302)
T ss_dssp             TTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             HccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCH
Confidence            9998864210        0000011111111221211         11122223346678888999999 999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.39  E-value=4.5e-13  Score=110.96  Aligned_cols=140  Identities=16%  Similarity=0.235  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++..++           ...+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        60 ~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~g  136 (476)
T 2y94_A           60 VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHM  136 (476)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457899999999988           66788999999999999999998643   58888888888777           


Q ss_pred             ----------------------CC------CCccccccccCCcCccCccccccCCC-Ccce----------eEecCCCCC
Q 048710          106 ----------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~p~  146 (208)
                                            +-      ..........||+.|+|||.+.+..+ +.++          |++||..||
T Consensus       137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf  216 (476)
T 2y94_A          137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF  216 (476)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCC
Confidence                                  00      01111234578999999999988765 4555          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ... +......+...      .....+    ..+.+++..||+.+ .+|||+
T Consensus       217 ~~~~------~~~-~~~~i~~~~~~------~p~~~s----~~~~~Li~~~L~~dP~~Rpt~  261 (476)
T 2y94_A          217 DDDH------VPT-LFKKICDGIFY------TPQYLN----PSVISLLKHMLQVDPMKRATI  261 (476)
T ss_dssp             CCSS------SHH-HHHHHHTTCCC------CCTTCC----HHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCC------HHH-HHHHHhcCCcC------CCccCC----HHHHHHHHHHcCCCchhCcCH
Confidence            7421      111 11222222110      111112    24567778999999 999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.39  E-value=4.6e-13  Score=105.73  Aligned_cols=140  Identities=15%  Similarity=0.159  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           ...+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        65 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~  141 (327)
T 3a62_A           65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQKG  141 (327)
T ss_dssp             ------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999988           66788999999999999999998643   47777777776666           


Q ss_pred             ----------------------CCC-------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCC
Q 048710          106 ----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~  146 (208)
                                            +-+       .........||+.|+|||.+.+..++.++          |++||+.||
T Consensus       142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  221 (327)
T 3a62_A          142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF  221 (327)
T ss_dssp             CCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCC
Confidence                                  000       01112345689999999999988888887          999999999


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ....+.... .+..      .+....    ...+.+++.+||+.+ .+||++
T Consensus       222 ~~~~------~~~~~~~i~-~~~~------~~p~~~----~~~~~~li~~~L~~dp~~R~~~  266 (327)
T 3a62_A          222 TGEN------RKKTIDKIL-KCKL------NLPPYL----TQEARDLLKKLLKRNAASRLGA  266 (327)
T ss_dssp             CCSS------HHHHHHHHH-HTCC------CCCTTS----CHHHHHHHHHHSCSCGGGSTTS
T ss_pred             CCCC------HHHHHHHHH-hCCC------CCCCCC----CHHHHHHHHHHHhcCHhhccCC
Confidence            7431      111122222 2211      111111    234567778999999 999964

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.39  E-value=4.4e-13  Score=109.39  Aligned_cols=143  Identities=16%  Similarity=0.189  Sum_probs=91.2

Q ss_pred             HHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------------
Q 048710           50 KLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------------  105 (208)
                      .|.+|+.+|.+++          ...+..++||||+++|+|.+++....   .+++.....++.++              
T Consensus       186 ~~~~E~~~l~~l~hpniv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivH  262 (419)
T 3i6u_A          186 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIH  262 (419)
T ss_dssp             CHHHHHHHHHHCCCTTBCCCCEEEESSEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhCCCCCEeeEEEEEecCceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            5899999999998          45667899999999999999998654   58888888877777              


Q ss_pred             ----------C-CC-----------------CccccccccCCcCccCcccccc---CCCCcce----------eEecCCC
Q 048710          106 ----------L-AD-----------------QTYMTTQVQGTFGYLDLQYFQS---SPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ----------~-~~-----------------~~~~~~~~~gt~~y~aPE~~~~---~~~~~ks----------E~~tg~~  144 (208)
                                . .+                 .........||++|+|||++.+   ..++.++          |++||..
T Consensus       263 rDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~  342 (419)
T 3i6u_A          263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP  342 (419)
T ss_dssp             SCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence                      0 00                 0111234568999999999853   5666666          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||.....  ...+..    ....+....  .+....    .....+.+++.+||+.+ .+|||+
T Consensus       343 pf~~~~~--~~~~~~----~i~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~  394 (419)
T 3i6u_A          343 PFSEHRT--QVSLKD----QITSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTT  394 (419)
T ss_dssp             SSCCCSS--SCCHHH----HHHTTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCcc--hHHHHH----HHhcCCCCC--Cchhhc----ccCHHHHHHHHHHccCChhHCcCH
Confidence            9974321  112222    222221110  011111    12235667888999999 999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.39  E-value=8.5e-13  Score=109.51  Aligned_cols=147  Identities=12%  Similarity=0.141  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+|..|++++..++            ...+..+|||||+ +|+|.+++.....  .++|..++.|+.++           
T Consensus        47 ~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~g  123 (483)
T 3sv0_A           47 PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSKS  123 (483)
T ss_dssp             CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45889999999887            5677889999999 9999999986443  58999999888888           


Q ss_pred             ------------C----C---------CCc--------------cccccccCCcCccCccccccCCCCcce---------
Q 048710          106 ------------L----A---------DQT--------------YMTTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 ------------~----~---------~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                  .    .         +..              .......||..|+|||.+.+..++.++         
T Consensus       124 IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil  203 (483)
T 3sv0_A          124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL  203 (483)
T ss_dssp             EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence                        0    0         000              011255689999999999998898888         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |++||+.||..............+........+    + .+...+    ...+.+++..||+.+ ++||++
T Consensus       204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~----~-~l~~~~----p~~l~~li~~cl~~dP~~RPs~  266 (483)
T 3sv0_A          204 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI----E-ALCRGY----PTEFASYFHYCRSLRFDDKPDY  266 (483)
T ss_dssp             HHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH----H-HHHTTS----CHHHHHHHHHHHTCCTTCCCCH
T ss_pred             HHHHhCCCCCccccchhHHHHHHHHhhccccccH----H-HHhcCC----cHHHHHHHHHHhcCChhhCcCH
Confidence             999999999854322211111111111111111    1 111122    245678888999999 999986

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.38  E-value=4.8e-13  Score=108.29  Aligned_cols=158  Identities=15%  Similarity=0.179  Sum_probs=103.7

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ..+.+.+|++++.+++             ......++||||+++|+|.+++........+++.....++.++        
T Consensus        50 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  129 (396)
T 4eut_A           50 PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (396)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999998             2344789999999999999999875543358999888888877        


Q ss_pred             ---------------C----CC----------------CccccccccCCcCccCcccccc--------CCCCcce-----
Q 048710          106 ---------------L----AD----------------QTYMTTQVQGTFGYLDLQYFQS--------SPFTEKS-----  137 (208)
Q Consensus       106 ---------------~----~~----------------~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ks-----  137 (208)
                                     .    .+                .........||..|+|||.+.+        ..++.++     
T Consensus       130 ~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSl  209 (396)
T 4eut_A          130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI  209 (396)
T ss_dssp             HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHH
T ss_pred             HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHH
Confidence                           0    00                0111124568999999999865        4455555     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccc-------------cccccc--ccCcHHHHHHHHHHHHHh
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI-------------FDGLVL--KEGGKDEIVVVVKLKKRC  197 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------~d~~l~--~~~~~~~~~~~~~l~~~C  197 (208)
                           |++||+.||.......  .....+..... +.....             .+..+.  ...+......+.++...|
T Consensus       210 G~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~  286 (396)
T 4eut_A          210 GVTFYHAATGSLPFRPFEGPR--RNKEVMYKIIT-GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANI  286 (396)
T ss_dssp             HHHHHHHHHSSCSEECTTCTT--TCHHHHHHHHH-SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCccc--chHHHHHHHhc-CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHh
Confidence                 9999999997432211  12222333322 211100             011111  122356667788899999


Q ss_pred             hcCC-CCCCCC
Q 048710          198 LNLN-EKKPTM  207 (208)
Q Consensus       198 ~~~~-~~RPsm  207 (208)
                      |+.| .+||++
T Consensus       287 L~~dP~~R~s~  297 (396)
T 4eut_A          287 LEADQEKCWGF  297 (396)
T ss_dssp             SCCCTTTSCCH
T ss_pred             hccChhhhccH
Confidence            9999 999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.38  E-value=6.5e-13  Score=105.84  Aligned_cols=144  Identities=14%  Similarity=0.188  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...++|.+|++++.+++           ...+..++||||++ |+|.+++.....  .+++.....++.++         
T Consensus        96 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  172 (348)
T 1u5q_A           96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS  172 (348)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34568999999999998           56788999999998 789888865433  58899888888777         


Q ss_pred             ------------------------CCCC---ccccccccCCcCccCccccc---cCCCCcce----------eEecCCCC
Q 048710          106 ------------------------LADQ---TYMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------~~~~---~~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~~p  145 (208)
                                              +-+.   ........||+.|+|||.+.   .+.++.++          |++||+.|
T Consensus       173 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  252 (348)
T 1u5q_A          173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP  252 (348)
T ss_dssp             TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                                    0000   11123457899999999984   56677777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ....+..... +..+....    ...+    ..+.+++..||+.+ ++|||+
T Consensus       253 ~~~~~------~~~~~~~~~~-~~~~~~~~----~~~~----~~l~~li~~~l~~dP~~Rps~  300 (348)
T 1u5q_A          253 LFNMN------AMSALYHIAQ-NESPALQS----GHWS----EYFRNFVDSCLQKIPQDRPTS  300 (348)
T ss_dssp             TTTSC------HHHHHHHHHH-SCCCCCCC----TTSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCC------hHHHHHHHHh-cCCCCCCC----CCCC----HHHHHHHHHHcccChhhCcCH
Confidence            87431      1222222222 21111111    1122    34567777999999 999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.38  E-value=4.4e-13  Score=106.79  Aligned_cols=146  Identities=15%  Similarity=0.208  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        91 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~  167 (349)
T 2w4o_A           91 DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN  167 (349)
T ss_dssp             --------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999988           66788999999999999999998653   48888888888877          


Q ss_pred             --------------CC---CC---------------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------LA---DQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~~---~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                    ..   +.               ........||+.|+|||.+.+..++.++          |++||.
T Consensus       168 ~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  247 (349)
T 2w4o_A          168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF  247 (349)
T ss_dssp             TCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence                          10   00               0111245689999999999988888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....     . ............. ...+ ..    ......+.+++.+||+.+ ++|||+
T Consensus       248 ~pf~~~~~-----~-~~~~~~i~~~~~~-~~~~-~~----~~~~~~~~~li~~~L~~dP~~Rpt~  300 (349)
T 2w4o_A          248 EPFYDERG-----D-QFMFRRILNCEYY-FISP-WW----DEVSLNAKDLVRKLIVLDPKKRLTT  300 (349)
T ss_dssp             CTTCCTTC-----H-HHHHHHHHTTCCC-CCTT-TT----TTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCCcc-----c-HHHHHHHHhCCCc-cCCc-hh----hhCCHHHHHHHHHHccCChhhCcCH
Confidence            99874321     1 1122222222111 1111 11    122235567778999999 999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.38  E-value=8.9e-14  Score=109.31  Aligned_cols=147  Identities=12%  Similarity=0.277  Sum_probs=94.9

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCe------EEEEEeeCCCCChhhHhhcCC---CCCCCCHHHHHHHHHh
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEV------LLLVYEFISNGTVYQYINNQN---EEFPIAWEMQLHIVVD  104 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~------~~lv~ey~~~GsL~~~l~~~~---~~~~l~~~~r~~i~~~  104 (208)
                      ....+.|.+|+.++.+++           ...+.      .++|+||+++|+|.+++....   ....+++..+..++.+
T Consensus        66 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q  145 (323)
T 3qup_A           66 SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD  145 (323)
T ss_dssp             CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHH
Confidence            344678999999999988           22222      399999999999999996532   2225889988888888


Q ss_pred             C------------------------CC---------CC---------ccccccccCCcCccCccccccCCCCcce-----
Q 048710          105 S------------------------LA---------DQ---------TYMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       105 i------------------------~~---------~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +                        ..         +.         ........+|+.|+|||.+.+..++.++     
T Consensus       146 i~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  225 (323)
T 3qup_A          146 IACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF  225 (323)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhH
Confidence            7                        00         00         0111234467789999999988888888     


Q ss_pred             -----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++| |..||.....   ..+.    .....+...         ..+......+.+++.+||+.+ .+|||+
T Consensus       226 G~il~ell~~g~~p~~~~~~---~~~~----~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~  286 (323)
T 3qup_A          226 GVTMWEIMTRGQTPYAGIEN---AEIY----NYLIGGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSF  286 (323)
T ss_dssp             HHHHHHHHTTSCCTTTTCCG---GGHH----HHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             HHHHHHHHhCCCCCccccCh---HHHH----HHHhcCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCH
Confidence                 9999 8999874321   1121    112122111         111122345678888999999 999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.38  E-value=1.3e-13  Score=106.30  Aligned_cols=144  Identities=15%  Similarity=0.248  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..++||||+++|+|.+++.+..   .+++.....++.++           
T Consensus        52 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~  128 (283)
T 3bhy_A           52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSKR  128 (283)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            578999999999988           66788999999999999999997643   58899888888887           


Q ss_pred             -------------CCCC-------------------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------LADQ-------------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~~~~-------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   ..+.                   ........||+.|+|||.+.+..++.++          |++||.
T Consensus       129 i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  208 (283)
T 3bhy_A          129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA  208 (283)
T ss_dssp             EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC
Confidence                         1000                   0011234589999999999988888888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ...... .......  ..++....    .....+.+++.+||+.+ ++|||+
T Consensus       209 ~p~~~~~------~~~~~~-~~~~~~~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~  260 (283)
T 3bhy_A          209 SPFLGET------KQETLT-NISAVNY--DFDEEYFS----NTSELAKDFIRRLLVKDPKRRMTI  260 (283)
T ss_dssp             CTTCCSS------HHHHHH-HHHTTCC--CCCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCcc------hHHHHH-HhHhccc--CCcchhcc----cCCHHHHHHHHHHccCCHhHCcCH
Confidence            9987432      111111 1111111  01111111    12234667888999999 999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.38  E-value=7.7e-13  Score=101.66  Aligned_cols=144  Identities=16%  Similarity=0.198  Sum_probs=98.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|++++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~  125 (277)
T 3f3z_A           49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL  125 (277)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4578999999999998           67788999999999999999997643   48888888888877          


Q ss_pred             -------------C---CC----------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------L---AD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~---~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   .   ..                .........||+.|+|||.+.+. ++.++          |++||+
T Consensus       126 ~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~  204 (277)
T 3f3z_A          126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGY  204 (277)
T ss_dssp             TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSS
T ss_pred             CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCC
Confidence                         0   00                01112345689999999998654 77777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... .......+....  ......    .....+.++...||+.+ .+|||+
T Consensus       205 ~p~~~~~------~~~-~~~~~~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dp~~R~s~  256 (277)
T 3f3z_A          205 PPFSAPT------DSE-VMLKIREGTFTF--PEKDWL----NVSPQAESLIRRLLTKSPKQRITS  256 (277)
T ss_dssp             CSSCCSS------HHH-HHHHHHHCCCCC--CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCC------HHH-HHHHHHhCCCCC--Cchhhh----cCCHHHHHHHHHHccCChhhCcCH
Confidence            9997432      111 122222221110  000000    12245667888999999 999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.38  E-value=2e-13  Score=110.83  Aligned_cols=148  Identities=14%  Similarity=0.117  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           49 NKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ..+.+|+.++.++.                .+.+..||||||+++|+|.++|...... .+++.....++.++       
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~L  177 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYL  177 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            45778888875542                1256789999999999999999875432 58999988888877       


Q ss_pred             -----------------CC---CC---------------ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------LA---DQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------~~---~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                       ..   +.               ........||+.|+|||++.+..++.++          |++
T Consensus       178 H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  257 (400)
T 1nxk_A          178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_dssp             HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred             HHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence                             10   00               0112345679999999999988899888          999


Q ss_pred             cCCCCCCCCCccCCc-cHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENK-SLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..||......... ...    .....+... ...+. ..    .....+.+++..||+.+ .+|||+
T Consensus       258 ~g~~pf~~~~~~~~~~~~~----~~i~~~~~~-~~~~~-~~----~~s~~~~~li~~~L~~dP~~Rpt~  316 (400)
T 1nxk_A          258 CGYPPFYSNHGLAISPGMK----TRIRMGQYE-FPNPE-WS----EVSEEVKMLIRNLLKTEPTQRMTI  316 (400)
T ss_dssp             HSSCSCCCCTTCSSCCSHH----HHHHHTCCC-CCTTT-TT----TSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             hCCCCCCCCccccccHHHH----HHHHcCccc-CCCcc-cc----cCCHHHHHHHHHHCCCChhHCcCH
Confidence            999999743222111 111    112222110 00000 01    12234567788999999 999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.38  E-value=2.6e-13  Score=104.54  Aligned_cols=137  Identities=20%  Similarity=0.269  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHhhcc-----------c----------------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHH
Q 048710           49 NKLINEVVILSQIN-----------L----------------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHI  101 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~----------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i  101 (208)
                      ..+.+|++++.+++           .                ..+..++||||+++|+|.+++...... .+++.....+
T Consensus        49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i  127 (284)
T 2a19_B           49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALEL  127 (284)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGS-CCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCC-CCCHHHHHHH
Confidence            46789999999988           1                134578999999999999999764322 6889888888


Q ss_pred             HHhC---------------------------------CC------CCccccccccCCcCccCccccccCCCCcce-----
Q 048710          102 VVDS---------------------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-----  137 (208)
Q Consensus       102 ~~~i---------------------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-----  137 (208)
                      +.++                                 +-      ..........||+.|+|||.+.+..++.++     
T Consensus       128 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  207 (284)
T 2a19_B          128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL  207 (284)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHH
Confidence            8877                                 00      011112345689999999999988888888     


Q ss_pred             -----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           |++||..|+...         .........+.+.        ...+    ..+.+++.+||+.+ .+|||+
T Consensus       208 G~il~~l~~~~~~~~~~---------~~~~~~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~  262 (284)
T 2a19_B          208 GLILAELLHVCDTAFET---------SKFFTDLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNT  262 (284)
T ss_dssp             HHHHHHHHSCCSSHHHH---------HHHHHHHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHhcCCcchhH---------HHHHHHhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCH
Confidence                 999998876411         1111222222221        1222    23557778999999 999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.38  E-value=4.9e-13  Score=103.57  Aligned_cols=148  Identities=9%  Similarity=0.135  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.++.+++           ...+..++|+||+++|+|.+++........+++.....++.++         
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  140 (295)
T 2clq_A           61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD  140 (295)
T ss_dssp             ---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            34567999999999988           5678899999999999999999876443356777777666666         


Q ss_pred             ---------------CC-CC----------------ccccccccCCcCccCccccccCC--CCcce----------eEec
Q 048710          106 ---------------LA-DQ----------------TYMTTQVQGTFGYLDLQYFQSSP--FTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------~~-~~----------------~~~~~~~~gt~~y~aPE~~~~~~--~~~ks----------E~~t  141 (208)
                                     .. +.                ........||+.|+|||.+.+..  ++.++          |++|
T Consensus       141 ~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~  220 (295)
T 2clq_A          141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT  220 (295)
T ss_dssp             TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHH
Confidence                           00 00                00122346899999999987643  66666          9999


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....   .  ............     ..+.+....    ...+.+++.+||+.+ ++|||+
T Consensus       221 g~~pf~~~~---~--~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~  273 (295)
T 2clq_A          221 GKPPFYELG---E--PQAAMFKVGMFK-----VHPEIPESM----SAEAKAFILKCFEPDPDKRACA  273 (295)
T ss_dssp             TSCTTGGGS---S--HHHHHHHHHHHC-----CCCCCCTTS----CHHHHHHHHHTTCSSTTTSCCH
T ss_pred             CCCCccCCC---c--hhHHHHhhcccc-----ccccccccC----CHHHHHHHHHHccCChhhCCCH
Confidence            999987321   1  111111111111     111222222    235567888999999 999986

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.38  E-value=7.3e-13  Score=101.96  Aligned_cols=140  Identities=19%  Similarity=0.243  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++           
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T 3fdn_A           53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSKR  129 (279)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457899999999988           66788999999999999999998643   47888888888777           


Q ss_pred             -------------CCC--------------CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 -------------LAD--------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 -------------~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                   ..+              .........||..|+|||.+.+..++.++          |++||..||..
T Consensus       130 i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             CEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             EecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence                         000              01112345689999999999988888887          99999999874


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..      ...... .......      .....    ....+.+++..||+.+ .+|||+
T Consensus       210 ~~------~~~~~~-~~~~~~~------~~~~~----~~~~~~~li~~~l~~~p~~Rps~  252 (279)
T 3fdn_A          210 NT------YQETYK-RISRVEF------TFPDF----VTEGARDLISRLLKHNPSQRPML  252 (279)
T ss_dssp             SS------HHHHHH-HHHHTCC------CCCTT----SCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             Cc------HHHHHH-HHHhCCC------CCCCc----CCHHHHHHHHHHhccChhhCCCH
Confidence            21      111111 1211111      11111    2234567788999999 999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.37  E-value=4e-13  Score=103.07  Aligned_cols=144  Identities=17%  Similarity=0.180  Sum_probs=96.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++          
T Consensus        48 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~  124 (276)
T 2yex_A           48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI  124 (276)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3568999999999988           56788999999999999999997543   48888888888877          


Q ss_pred             -----------------------CCCCc---------cccccccCCcCccCccccccCCC-Ccce----------eEecC
Q 048710          106 -----------------------LADQT---------YMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTK  142 (208)
Q Consensus       106 -----------------------~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg  142 (208)
                                             +-+..         .......||..|+|||.+.+..+ +.++          |++||
T Consensus       125 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  204 (276)
T 2yex_A          125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG  204 (276)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhC
Confidence                                   00000         11234568999999999987665 5555          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....... ...     ........  ...+      .......+.++...||+.+ ++|||+
T Consensus       205 ~~p~~~~~~~~-~~~-----~~~~~~~~--~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~  256 (276)
T 2yex_A          205 ELPWDQPSDSC-QEY-----SDWKEKKT--YLNP------WKKIDSAPLALLHKILVENPSARITI  256 (276)
T ss_dssp             SCCCSCSCTTS-HHH-----HHHHTTCT--TSTT------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCCchHH-HHH-----HHhhhccc--ccCc------hhhcCHHHHHHHHHHCCCCchhCCCH
Confidence            99997432111 111     11111110  0000      0112234567888999999 999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.37  E-value=5.5e-13  Score=105.78  Aligned_cols=138  Identities=12%  Similarity=0.133  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..+.+|+.++..++           .+.+..++||||+ +|+|.+++....   .+++.....++.++            
T Consensus        54 ~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~gi  129 (336)
T 3h4j_B           54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRHKI  129 (336)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            47899999999988           6778899999999 799999997643   58888888888777            


Q ss_pred             ---------------------CC------CCccccccccCCcCccCccccccCCC-Ccce----------eEecCCCCCC
Q 048710          106 ---------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 ---------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~p~~  147 (208)
                                           +-      ..........||+.|+|||.+.+..+ +.++          |++||..||.
T Consensus       130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  209 (336)
T 3h4j_B          130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD  209 (336)
T ss_dssp             CCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred             EecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence                                 00      01111234568999999999988776 4555          9999999997


Q ss_pred             CCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          148 LTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ......                +...+.... ...+......+.+++.+||+.+ .+|||+
T Consensus       210 ~~~~~~----------------~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~Rpt~  253 (336)
T 3h4j_B          210 DEFIPN----------------LFKKVNSCV-YVMPDFLSPGAQSLIRRMIVADPMQRITI  253 (336)
T ss_dssp             CSSSTT----------------CBCCCCSSC-CCCCTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CccHHH----------------HHHHHHcCC-CCCcccCCHHHHHHHHHHcCCChhHCcCH
Confidence            432111                000000000 0111112234567777999999 999986

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.37  E-value=1.2e-12  Score=104.84  Aligned_cols=146  Identities=13%  Similarity=0.170  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++           
T Consensus        60 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~~  136 (361)
T 3uc3_A           60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSMQ  136 (361)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356889999999988           67788999999999999999997643   48888888887777           


Q ss_pred             -------------CCCC-----------------ccccccccCCcCccCccccccCCCCcc-e----------eEecCCC
Q 048710          106 -------------LADQ-----------------TYMTTQVQGTFGYLDLQYFQSSPFTEK-S----------NLLTKEK  144 (208)
Q Consensus       106 -------------~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~k-s----------E~~tg~~  144 (208)
                                   ..+.                 ........||+.|+|||.+.+..++.+ +          |++||+.
T Consensus       137 ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  216 (361)
T 3uc3_A          137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAY  216 (361)
T ss_dssp             CCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCC
Confidence                         0000                 011134568999999999988877766 4          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....  ........+....... .      .+...  ......+.+++.+||+.+ .+|||+
T Consensus       217 Pf~~~~--~~~~~~~~~~~~~~~~-~------~~~~~--~~~s~~~~~li~~~L~~dP~~Rps~  269 (361)
T 3uc3_A          217 PFEDPE--EPRDYRKTIQRILSVK-Y------SIPDD--IRISPECCHLISRIFVADPATRISI  269 (361)
T ss_dssp             SCC------CCCHHHHHHHHHTTC-C------CCCTT--SCCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCc--cHHHHHHHHHHHhcCC-C------CCCCc--CCCCHHHHHHHHHHccCChhHCcCH
Confidence            997432  1122323233222111 1      00000  011234567778999999 999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.37  E-value=8e-13  Score=101.99  Aligned_cols=140  Identities=15%  Similarity=0.169  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  134 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHERK  134 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999988           66788999999999999999998653   47888888887777           


Q ss_pred             ----------------------CCC-----CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ----------------------LAD-----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ----------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                            +-+     .........||..|+|||.+.+..++.++          |++||..||..
T Consensus       135 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence                                  000     01112345689999999999988888888          99999999874


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..      ...... .......      .+....    ...+.++...||+.+ ++|||+
T Consensus       215 ~~------~~~~~~-~~~~~~~------~~~~~~----~~~~~~li~~~l~~~p~~Rps~  257 (284)
T 2vgo_A          215 PS------HTETHR-RIVNVDL------KFPPFL----SDGSKDLISKLLRYHPPQRLPL  257 (284)
T ss_dssp             SS------HHHHHH-HHHTTCC------CCCTTS----CHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CC------HhHHHH-HHhcccc------CCCCcC----CHHHHHHHHHHhhcCHhhCCCH
Confidence            32      111111 1212111      111112    234567788999999 999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.37  E-value=2.4e-12  Score=100.66  Aligned_cols=145  Identities=16%  Similarity=0.175  Sum_probs=99.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           ...+..++|+||+++|+|.+++.....  .+++.....++.++          
T Consensus        67 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~  144 (314)
T 3com_A           67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFM  144 (314)
T ss_dssp             CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467999999999988           567889999999999999999974333  58888888888877          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       .+.........||..|+|||.+.+..++.++          |++||+.|
T Consensus       145 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (314)
T 3com_A          145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP  224 (314)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence                                   0       0011112345689999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ......... .........       +......+.+++..||+.+ .+|||+
T Consensus       225 ~~~~~------~~~~~~~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rpt~  273 (314)
T 3com_A          225 YADIH------PMRAIFMIP-TNPPPTFRK-------PELWSDNFTDFVKQCLVKSPEQRATA  273 (314)
T ss_dssp             TTTSC------HHHHHHHHH-HSCCCCCSS-------GGGSCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             CCCCC------hHHHHHHHh-cCCCcccCC-------cccCCHHHHHHHHHHccCChhhCcCH
Confidence            87431      111111111 111111111       1112235667888999999 999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.36  E-value=1.2e-12  Score=101.59  Aligned_cols=152  Identities=14%  Similarity=0.193  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHhh--cc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQ--IN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~--l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+..|.+++..  ++               ...+..++||||+++|+|.++++..    .+++..+..++.++   
T Consensus        42 ~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~  117 (301)
T 3q4u_A           42 RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASG  117 (301)
T ss_dssp             GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHH
Confidence            345567778887776  34               2245688999999999999999653    58888888877765   


Q ss_pred             ----C-------------------------CC---------Cc-------c----ccccccCCcCccCccccccC-----
Q 048710          106 ----L-------------------------AD---------QT-------Y----MTTQVQGTFGYLDLQYFQSS-----  131 (208)
Q Consensus       106 ----~-------------------------~~---------~~-------~----~~~~~~gt~~y~aPE~~~~~-----  131 (208)
                          .                         .+         .+       .    ......||+.|+|||.+.+.     
T Consensus       118 l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  197 (301)
T 3q4u_A          118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDC  197 (301)
T ss_dssp             HHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTC
T ss_pred             HHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCc
Confidence                0                         00         00       0    01123789999999999876     


Q ss_pred             -CCCcce----------eEecC----------CCCCCCCCccCCccHHHHHHHHHhcCccccccccccccc-CcHHHHHH
Q 048710          132 -PFTEKS----------NLLTK----------EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKE-GGKDEIVV  189 (208)
Q Consensus       132 -~~~~ks----------E~~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~  189 (208)
                       .++.++          |++||          ..||........ .. ..+.........    .+.+... .+......
T Consensus       198 ~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  271 (301)
T 3q4u_A          198 FDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP-SF-EDMRKVVCVDQQ----RPNIPNRWFSDPTLTS  271 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHH
T ss_pred             ccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc-ch-hhhhHHHhccCC----CCCCChhhccCccHHH
Confidence             344555          99999          777764322221 12 222222211111    1112111 22356677


Q ss_pred             HHHHHHHhhcCC-CCCCCC
Q 048710          190 VVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       190 ~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.+++.+||+.+ .+|||+
T Consensus       272 l~~li~~cl~~dP~~Rps~  290 (301)
T 3q4u_A          272 LAKLMKECWYQNPSARLTA  290 (301)
T ss_dssp             HHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHHHHhhcChhhCCCH
Confidence            889999999999 999996

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.36  E-value=4.5e-13  Score=110.07  Aligned_cols=139  Identities=11%  Similarity=0.125  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++.+++           ...+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus       191 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  267 (446)
T 4ejn_A          191 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSE  267 (446)
T ss_dssp             ----------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhc
Confidence            3467889999999887           66788999999999999999997643   57888777776665          


Q ss_pred             ------------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 ------------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                              +       ...........||++|+|||++.+..++.++          |++||+.
T Consensus       268 ~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  347 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL  347 (446)
T ss_dssp             TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCC
Confidence                                    0       0111123456799999999999999999888          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      ||....      ...... ....+..      .+....    ...+.++...||+.+ .+||
T Consensus       348 Pf~~~~------~~~~~~-~i~~~~~------~~p~~~----~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          348 PFYNQD------HEKLFE-LILMEEI------RFPRTL----GPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             SSCCSS------HHHHHH-HHHHCCC------CCCTTS----CHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCC------HHHHHH-HHHhCCC------CCCccC----CHHHHHHHHHHcccCHHHhC
Confidence            997431      111112 2212211      111112    234567778999999 9999

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.36  E-value=1.4e-12  Score=103.91  Aligned_cols=151  Identities=11%  Similarity=0.102  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHhhcc---------------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHH
Q 048710           49 NKLINEVVILSQIN---------------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHI  101 (208)
Q Consensus        49 ~~f~~E~~~l~~l~---------------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i  101 (208)
                      ..|.+|++++.+++                           ...+..++||||+ +|+|.+++...... .+++..+..+
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~-~l~~~~~~~i  164 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKH-VLSERSVLQV  164 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGG-CCCHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcC-CCCHHHHHHH
Confidence            35788888888776                           1368899999999 99999999865222 6899999999


Q ss_pred             HHhC------------------------CCCC-----------c--------------cccccccCCcCccCccccccCC
Q 048710          102 VVDS------------------------LADQ-----------T--------------YMTTQVQGTFGYLDLQYFQSSP  132 (208)
Q Consensus       102 ~~~i------------------------~~~~-----------~--------------~~~~~~~gt~~y~aPE~~~~~~  132 (208)
                      +.++                        ..+.           .              .......||+.|+|||.+.+..
T Consensus       165 ~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  244 (352)
T 2jii_A          165 ACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG  244 (352)
T ss_dssp             HHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCC
Confidence            8888                        0000           0              0012347899999999999988


Q ss_pred             CCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-
Q 048710          133 FTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-  201 (208)
Q Consensus       133 ~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-  201 (208)
                      ++.++          |++||+.||....... ..+...... .. .......++.....   .....+.+++..||+.+ 
T Consensus       245 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp  318 (352)
T 2jii_A          245 PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-EDIMKQKQK-FV-DKPGPFVGPCGHWI---RPSETLQKYLKVVMALTY  318 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHHH-HH-HSCCCEECTTSCEE---CCCHHHHHHHHHHHTCCT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCcCH-HHHHHHHHh-cc-CChhhhhhhccccC---CCcHHHHHHHHHHHhCCh
Confidence            88888          9999999998432111 111111111 11 12222222111100   11235667778999999 


Q ss_pred             CCCCCC
Q 048710          202 EKKPTM  207 (208)
Q Consensus       202 ~~RPsm  207 (208)
                      ++|||+
T Consensus       319 ~~Rps~  324 (352)
T 2jii_A          319 EEKPPY  324 (352)
T ss_dssp             TCCCCH
T ss_pred             hhCCCH
Confidence            999996

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.36  E-value=1e-12  Score=107.79  Aligned_cols=97  Identities=18%  Similarity=0.293  Sum_probs=75.8

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      .|.+|..++.+++           .+.+..||||||+++|+|.++|.+...  .+++.....++.++             
T Consensus       120 ~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~~gii  197 (437)
T 4aw2_A          120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQLHYV  197 (437)
T ss_dssp             CHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            3899999999887           678889999999999999999987433  58888777777766             


Q ss_pred             ----------------------------CCCCccccccccCCcCccCccccc-----cCCCCcce----------eEecC
Q 048710          106 ----------------------------LADQTYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ----------------------------~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E~~tg  142 (208)
                                                  ..+.........||+.|+|||++.     ...++.++          |++||
T Consensus       198 HrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG  277 (437)
T 4aw2_A          198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG  277 (437)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHS
T ss_pred             ecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhC
Confidence                                        001111223467999999999997     45677777          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       278 ~~Pf~~  283 (437)
T 4aw2_A          278 ETPFYA  283 (437)
T ss_dssp             SCTTCC
T ss_pred             CCCCCC
Confidence            999974

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=4.2e-13  Score=104.07  Aligned_cols=145  Identities=15%  Similarity=0.230  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ...+.|.+|+.++.+++            ...+..++|+||+.+|+|.+++.....  .+++.....++.++        
T Consensus        64 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH  141 (298)
T 3pls_A           64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLA  141 (298)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            34578999999999988            334445999999999999999987543  58888888888777        


Q ss_pred             -------------------------CCC-----------CccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 -------------------------LAD-----------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 -------------------------~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                               +-+           .........||..|+|||.+.+..++.++          |+
T Consensus       142 ~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  221 (298)
T 3pls_A          142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL  221 (298)
T ss_dssp             HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHH
Confidence                                     000           01112234568899999999998888888          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||..|+....  ....+..    ....+...         ..+......+.+++.+||+.+ .+|||+
T Consensus       222 ~~g~~~~~~~~--~~~~~~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~  275 (298)
T 3pls_A          222 LTRGAPPYRHI--DPFDLTH----FLAQGRRL---------PQPEYCPDSLYQVMQQCWEADPAVRPTF  275 (298)
T ss_dssp             HHTSCCTTTTS--CGGGHHH----HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhCCCCCCccC--CHHHHHH----HhhcCCCC---------CCCccchHHHHHHHHHHccCChhhCcCH
Confidence            99666543211  1111211    22122110         111112235667888999999 999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.36  E-value=6.8e-13  Score=105.48  Aligned_cols=145  Identities=12%  Similarity=0.121  Sum_probs=97.0

Q ss_pred             HHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           50 KLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      .+.+|++++.++.            .+.+..|+||||+++|+|.+++....   .+++.....++.++            
T Consensus        61 ~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~gi  137 (342)
T 2qr7_A           61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQGV  137 (342)
T ss_dssp             CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4567888888773            67788999999999999999998653   58888888888777            


Q ss_pred             -------------CC-C------------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -------------LA-D------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -------------~~-~------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                   .. +                  .........||+.|+|||.+.+..++.++          |++||.
T Consensus       138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  217 (342)
T 2qr7_A          138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY  217 (342)
T ss_dssp             ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC
Confidence                         00 0                  00112245679999999999887777777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||......   .. ..+......+...  +..    .........+.++...||+.+ ++|||+
T Consensus       218 ~Pf~~~~~~---~~-~~~~~~i~~~~~~--~~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~  272 (342)
T 2qr7_A          218 TPFANGPDD---TP-EEILARIGSGKFS--LSG----GYWNSVSDTAKDLVSKMLHVDPHQRLTA  272 (342)
T ss_dssp             CSSCSSTTS---CH-HHHHHHHHHCCCC--CCS----TTTTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCCcC---CH-HHHHHHHccCCcc--cCc----cccccCCHHHHHHHHHHCCCChhHCcCH
Confidence            999743211   12 2222333333221  011    111112234567777999999 999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.36  E-value=6.2e-13  Score=105.33  Aligned_cols=150  Identities=15%  Similarity=0.167  Sum_probs=92.7

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCC------------------------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNE------------------------   89 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~------------------------   89 (208)
                      ....+.|.+|+.++.+++           .+.+..++||||+++|+|.+++.....                        
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            344578999999999998           677889999999999999999852100                        


Q ss_pred             -------------CCCCCHHHHHHHHHhC------------------------CCCC-----------c-----------
Q 048710           90 -------------EFPIAWEMQLHIVVDS------------------------LADQ-----------T-----------  110 (208)
Q Consensus        90 -------------~~~l~~~~r~~i~~~i------------------------~~~~-----------~-----------  110 (208)
                                   ...+++.....++.++                        ..+.           .           
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~  228 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY  228 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccc
Confidence                         0012344445555555                        1010           0           


Q ss_pred             cccccccCCcCccCcccccc--CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccc
Q 048710          111 YMTTQVQGTFGYLDLQYFQS--SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLV  178 (208)
Q Consensus       111 ~~~~~~~gt~~y~aPE~~~~--~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  178 (208)
                      .......||+.|+|||.+.+  ..++.++          |++||+.||....      ..............  ...+..
T Consensus       229 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~--~~~~~~  300 (345)
T 3hko_A          229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN------DADTISQVLNKKLC--FENPNY  300 (345)
T ss_dssp             ------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC--TTSGGG
T ss_pred             ccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcccc--cCCccc
Confidence            01234568999999999875  6777777          9999999997432      12222222222111  001110


Q ss_pred             cccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          179 LKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                           ......+.++...||+.+ .+||++
T Consensus       301 -----~~~~~~~~~li~~~l~~~p~~Rps~  325 (345)
T 3hko_A          301 -----NVLSPLARDLLSNLLNRNVDERFDA  325 (345)
T ss_dssp             -----GGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             -----ccCCHHHHHHHHHHcCCChhHCCCH
Confidence                 112235667788999999 999985

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.36  E-value=2.2e-12  Score=100.54  Aligned_cols=144  Identities=18%  Similarity=0.247  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  126 (304)
T 2jam_A           50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHENG  126 (304)
T ss_dssp             --HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            356899999999988           67788999999999999999997643   47888887777776           


Q ss_pred             ------------C---CCC---------------ccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------L---ADQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------~---~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                  .   .+.               ........||+.|+|||.+.+..++.++          |++||..|
T Consensus       127 i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  206 (304)
T 2jam_A          127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP  206 (304)
T ss_dssp             CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                        0   000               0011223489999999999988888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ... +......+...  .+.....    .....+.++...||+.+ ++|||+
T Consensus       207 f~~~~------~~~-~~~~i~~~~~~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~  256 (304)
T 2jam_A          207 FYEET------ESK-LFEKIKEGYYE--FESPFWD----DISESAKDFICHLLEKDPNERYTC  256 (304)
T ss_dssp             TTTSC------HHH-HHHHHHHCCCC--CCTTTTT----TSCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             CCCCC------HHH-HHHHHHcCCCC--CCccccc----cCCHHHHHHHHHHcCCChhHCcCH
Confidence            87431      111 12222222211  0111111    12235667888999999 999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.36  E-value=1.1e-12  Score=100.64  Aligned_cols=140  Identities=16%  Similarity=0.210  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.++.+++           ...+..++|+||+++|+|.+++....   .+++.....++.++           
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~  131 (276)
T 2h6d_A           55 VGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRHM  131 (276)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457899999999988           66788999999999999999997643   47888888888777           


Q ss_pred             -------------CCC---------------CccccccccCCcCccCccccccCCC-Ccce----------eEecCCCCC
Q 048710          106 -------------LAD---------------QTYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 -------------~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~p~  146 (208)
                                   ..+               .........||+.|+|||.+.+..+ +.++          |++||+.||
T Consensus       132 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                         000               0011123457899999999987665 4555          999999998


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....      ... +......+..      .+....    ...+.+++.+||+.+ ++|||+
T Consensus       212 ~~~~------~~~-~~~~~~~~~~------~~~~~~----~~~l~~li~~~l~~~p~~Rps~  256 (276)
T 2h6d_A          212 DDEH------VPT-LFKKIRGGVF------YIPEYL----NRSVATLLMHMLQVDPLKRATI  256 (276)
T ss_dssp             CCSS------HHH-HHHHHHHCCC------CCCTTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCc------HHH-HHHHhhcCcc------cCchhc----CHHHHHHHHHHccCChhhCCCH
Confidence            7421      111 2222222211      011112    234567888999999 999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.36  E-value=1.1e-13  Score=107.05  Aligned_cols=145  Identities=14%  Similarity=0.207  Sum_probs=96.7

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.|.+|++++.+++          ...+..++|+||+++|+|.+++.....  .+++.....++.++          
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~  140 (291)
T 1u46_A           63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESK  140 (291)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHhC
Confidence            34578999999999988          344558999999999999999986433  48888888888877          


Q ss_pred             -----------------------CCCC--------c--cccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 -----------------------LADQ--------T--YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 -----------------------~~~~--------~--~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                             +-+.        .  .......||+.|+|||.+.+..++.++          |++| 
T Consensus       141 ~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  220 (291)
T 1u46_A          141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY  220 (291)
T ss_dssp             TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhC
Confidence                                   0000        0  011234567889999999888888777          9999 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....      ....+......+...         ..+......+.+++.+||+.+ .+|||+
T Consensus       221 g~~p~~~~~------~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~  272 (291)
T 1u46_A          221 GQEPWIGLN------GSQILHKIDKEGERL---------PRPEDCPQDIYNVMVQCWAHKPEDRPTF  272 (291)
T ss_dssp             SCCTTTTCC------HHHHHHHHHTSCCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCcccCC------HHHHHHHHHccCCCC---------CCCcCcCHHHHHHHHHHccCCcccCcCH
Confidence            999987432      112222222221110         111122345677888999999 999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.35  E-value=4.2e-13  Score=105.02  Aligned_cols=147  Identities=12%  Similarity=0.226  Sum_probs=95.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCC-----CeEEEEEeeCCCCChhhHhhcC---CCCCCCCHHHHHHHHHhC
Q 048710           45 EGKVNKLINEVVILSQIN-----------LET-----EVLLLVYEFISNGTVYQYINNQ---NEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~-----~~~~lv~ey~~~GsL~~~l~~~---~~~~~l~~~~r~~i~~~i  105 (208)
                      ....+.|.+|+.++.+++           .+.     ...++|+||+++|+|.+++...   .....+++.....++.++
T Consensus        77 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi  156 (313)
T 3brb_A           77 QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI  156 (313)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHH
Confidence            344578999999999988           111     2469999999999999999532   122368999998888887


Q ss_pred             ------------------------CC---------CCc---------cccccccCCcCccCccccccCCCCcce------
Q 048710          106 ------------------------LA---------DQT---------YMTTQVQGTFGYLDLQYFQSSPFTEKS------  137 (208)
Q Consensus       106 ------------------------~~---------~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~ks------  137 (208)
                                              ..         +..         .......+|+.|+|||.+.+..++.++      
T Consensus       157 ~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  236 (313)
T 3brb_A          157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG  236 (313)
T ss_dssp             HHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHH
Confidence                                    00         000         111234467899999999998888888      


Q ss_pred             ----eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |++| |..||.....   ..+.    .....+...         ..+......+.+++.+||+.+ .+|||+
T Consensus       237 ~il~el~~~g~~p~~~~~~---~~~~----~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~  296 (313)
T 3brb_A          237 VTMWEIATRGMTPYPGVQN---HEMY----DYLLHGHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTF  296 (313)
T ss_dssp             HHHHHHHTTSCCSSTTCCG---GGHH----HHHHTTCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             HHHHHHHhcCCCCCccCCH---HHHH----HHHHcCCCC---------CCCccccHHHHHHHHHHcCCChhhCcCH
Confidence                9999 8888874321   1121    112222111         111122345678888999999 999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.35  E-value=7.5e-13  Score=105.18  Aligned_cols=149  Identities=11%  Similarity=0.102  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHhhcc-----------cC----CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           49 NKLINEVVILSQIN-----------LE----TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~----~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ..+.+|+..+..++           ..    .+..|+||||+ +|+|.+++....   .+++..+..++.++        
T Consensus        93 ~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH  168 (345)
T 2v62_A           93 KDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIH  168 (345)
T ss_dssp             HHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            35778888888777           22    67899999999 999999998654   58899998888887        


Q ss_pred             ----------------CCCC-----------c--------------cccccccCCcCccCccccccCCCCcce-------
Q 048710          106 ----------------LADQ-----------T--------------YMTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 ----------------~~~~-----------~--------------~~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                      ..+.           +              .......||+.|+|||.+.+..++.++       
T Consensus       169 ~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  248 (345)
T 2v62_A          169 ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGY  248 (345)
T ss_dssp             HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHH
T ss_pred             hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHH
Confidence                            0000           0              001344689999999999998888888       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++||+.||....  .............. ..++..+......   ......+.+++..||+.+ ++||++
T Consensus       249 il~ell~g~~pf~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~  316 (345)
T 2v62_A          249 CMLRWLCGKLPWEQNL--KDPVAVQTAKTNLL-DELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNY  316 (345)
T ss_dssp             HHHHHHHSSCTTGGGT--TCHHHHHHHHHHHH-HTTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             HHHHHHhCCCCccccc--cccHHHHHHHHhhc-ccccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCH
Confidence               9999999996321  11111111111111 1111111111100   022335677888999999 999996

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.35  E-value=2.5e-13  Score=105.57  Aligned_cols=151  Identities=21%  Similarity=0.294  Sum_probs=87.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcC-----CCCCCCCHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQ-----NEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~-----~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+|.+|+.++.+++           ...+..++||||+++|+|.+++...     .....+++.....++.++     
T Consensus        56 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  135 (303)
T 2vwi_A           56 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE  135 (303)
T ss_dssp             ----------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence            3467899999999887           6667899999999999999998741     112258899888888877     


Q ss_pred             -------------------CCCC---------------------ccccccccCCcCccCcccccc-CCCCcce-------
Q 048710          106 -------------------LADQ---------------------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS-------  137 (208)
Q Consensus       106 -------------------~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks-------  137 (208)
                                         ..+.                     ........||+.|+|||.+.+ ..++.++       
T Consensus       136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  215 (303)
T 2vwi_A          136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI  215 (303)
T ss_dssp             HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHH
T ss_pred             HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHH
Confidence                               0000                     001123468999999999875 5577777       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcC--cc-cccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKED--RL-FEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~--~~-~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++||+.||......   ..   ........  .. ....++.+...++    ..+.+++.+||+.+ .+|||+
T Consensus       216 il~~l~~g~~pf~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~  282 (303)
T 2vwi_A          216 TAIELATGAAPYHKYPPM---KV---LMLTLQNDPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTA  282 (303)
T ss_dssp             HHHHHHHSSCTTTTSCGG---GH---HHHHHTSSCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHHhCCCCCccCchh---hH---HHHHhccCCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCH
Confidence               999999999743211   11   11111111  01 1111122222222    35667888999999 999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.34  E-value=5.5e-13  Score=106.41  Aligned_cols=102  Identities=17%  Similarity=0.261  Sum_probs=77.7

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      .....+.|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++       
T Consensus        71 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~l  147 (360)
T 3eqc_A           71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYL  147 (360)
T ss_dssp             CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999988           66788999999999999999998653   47787777776655       


Q ss_pred             ------------------CC---------CCc-----cccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ------------------LA---------DQT-----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ------------------~~---------~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                        ..         +.+     .......||+.|+|||.+.+..++.++          |++||+
T Consensus       148 h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  227 (360)
T 3eqc_A          148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR  227 (360)
T ss_dssp             HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTS
T ss_pred             HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                              00         000     012345789999999999998888888          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||..
T Consensus       228 ~pf~~  232 (360)
T 3eqc_A          228 YPIPP  232 (360)
T ss_dssp             CCSSC
T ss_pred             CCCCC
Confidence            99974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=4.5e-13  Score=106.96  Aligned_cols=143  Identities=17%  Similarity=0.204  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+.+|+.++.+++            ...+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus       102 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  178 (355)
T 1vzo_A          102 TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL  178 (355)
T ss_dssp             GGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            356788999998884            56778999999999999999998643   47888887777766          


Q ss_pred             -----------------------C--------CCCccccccccCCcCccCcccccc--CCCCcce----------eEecC
Q 048710          106 -----------------------L--------ADQTYMTTQVQGTFGYLDLQYFQS--SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -----------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ks----------E~~tg  142 (208)
                                             +        ...........||+.|+|||.+.+  ..++.++          |++||
T Consensus       179 ~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g  258 (355)
T 1vzo_A          179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG  258 (355)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHS
T ss_pred             CcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHC
Confidence                                   0        001111234569999999999985  3456666          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      +.||.....  ............ ...      +..    +......+.+++.+||+.+ .+||+
T Consensus       259 ~~pf~~~~~--~~~~~~~~~~~~-~~~------~~~----~~~~~~~~~~li~~~L~~dP~~R~~  310 (355)
T 1vzo_A          259 ASPFTVDGE--KNSQAEISRRIL-KSE------PPY----PQEMSALAKDLIQRLLMKDPKKRLG  310 (355)
T ss_dssp             SCTTSCTTS--CCCHHHHHHHHH-HCC------CCC----CTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             CCCCccCCc--cchHHHHHHHHh-ccC------CCC----CcccCHHHHHHHHHHhhhCHHHhcC
Confidence            999974321  112222222222 111      111    1122234567888999999 99994

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.34  E-value=1.4e-12  Score=102.54  Aligned_cols=122  Identities=11%  Similarity=0.074  Sum_probs=78.9

Q ss_pred             EEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------------------------------CCCC-----
Q 048710           68 LLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------------------------------LADQ-----  109 (208)
Q Consensus        68 ~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------------------------------~~~~-----  109 (208)
                      .++||||+++|+|.+++.........++.....++.++                                 +-+.     
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  215 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD  215 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence            89999999999999999876544456776677777666                                 0000     


Q ss_pred             --------------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHH
Q 048710          110 --------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAM  165 (208)
Q Consensus       110 --------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~  165 (208)
                                    ........||+.|+|||.+.+..++.++          |++||..|+..        . .......
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~-~~~~~~~  286 (332)
T 3qd2_B          216 QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------R-VRIITDV  286 (332)
T ss_dssp             CC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------H-HHHHHHH
T ss_pred             cchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------H-HHHHHHh
Confidence                          0112334699999999999998888888          99998766431        0 1111112


Q ss_pred             hcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          166 KEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       166 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....+.         ........+.+++.+||+.+ .+|||+
T Consensus       287 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~  320 (332)
T 3qd2_B          287 RNLKFPL---------LFTQKYPQEHMMVQDMLSPSPTERPEA  320 (332)
T ss_dssp             HTTCCCH---------HHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred             hccCCCc---------ccccCChhHHHHHHHHccCCCCcCCCH
Confidence            1221111         11223345577888999999 999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.34  E-value=7.9e-13  Score=105.94  Aligned_cols=144  Identities=19%  Similarity=0.280  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.|.+|+.++.++ +           ...+..++||||+++|+|.+++.+..   .+++.....++.++          
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~  219 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN  219 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            45789999999988 3           66788999999999999999998643   58888888888777          


Q ss_pred             -----------------------CC------CCccccccccCCcCccCccccccC------CCCcce----------eEe
Q 048710          106 -----------------------LA------DQTYMTTQVQGTFGYLDLQYFQSS------PFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~------~~~~ks----------E~~  140 (208)
                                             +-      ..........||+.|+|||++.+.      .++.++          |++
T Consensus       220 gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell  299 (365)
T 2y7j_A          220 NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL  299 (365)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH
Confidence                                   00      011112345789999999998643      466666          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..||....      ... .......+... ...+. ...    ....+.+++..||+.+ .+|||+
T Consensus       300 ~g~~pf~~~~------~~~-~~~~i~~~~~~-~~~~~-~~~----~~~~~~~li~~~L~~dP~~Rps~  354 (365)
T 2y7j_A          300 AGSPPFWHRR------QIL-MLRMIMEGQYQ-FSSPE-WDD----RSSTVKDLISRLLQVDPEARLTA  354 (365)
T ss_dssp             HSSCSSCCSS------HHH-HHHHHHHTCCC-CCHHH-HSS----SCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HCCCCCCCCC------HHH-HHHHHHhCCCC-CCCcc-ccc----CCHHHHHHHHHHcCCChhHCcCH
Confidence            9999997421      111 11122222111 00000 011    1234667888999999 999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.33  E-value=4e-12  Score=101.66  Aligned_cols=102  Identities=15%  Similarity=0.111  Sum_probs=79.4

Q ss_pred             hhHHHHHHHHHHHhhcc--------------cCCCeEEEEEeeCCCCChhhHhhcCC--CCCCCCHHHHHHHHHhC----
Q 048710           46 GKVNKLINEVVILSQIN--------------LETEVLLLVYEFISNGTVYQYINNQN--EEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~--------------~~~~~~~lv~ey~~~GsL~~~l~~~~--~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+|..|++++.+++              ...+..+|||||+++|+|.+++....  ....++|..+..++.++    
T Consensus       106 ~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L  185 (365)
T 3e7e_A          106 ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI  185 (365)
T ss_dssp             CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            34567888999888877              56788999999999999999997421  12269999999998888    


Q ss_pred             --------------------CC-----------CC------------------ccccccccCCcCccCccccccCCCCcc
Q 048710          106 --------------------LA-----------DQ------------------TYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus       106 --------------------~~-----------~~------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                                          ..           +.                  ........||++|+|||++.+..++.+
T Consensus       186 ~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  265 (365)
T 3e7e_A          186 EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ  265 (365)
T ss_dssp             HHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTH
T ss_pred             HHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcc
Confidence                                11           00                  111234568999999999999889988


Q ss_pred             e----------eEecCCCCCC
Q 048710          137 S----------NLLTKEKPIC  147 (208)
Q Consensus       137 s----------E~~tg~~p~~  147 (208)
                      +          |++||+.|+.
T Consensus       266 ~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCE
T ss_pred             ccHHHHHHHHHHHHhCCCccc
Confidence            8          9999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.33  E-value=1e-12  Score=103.77  Aligned_cols=99  Identities=11%  Similarity=0.094  Sum_probs=75.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           .+.+..++||||+++++|.+++....   .+++.....++.++          
T Consensus        67 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~  143 (331)
T 4aaa_A           67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH  143 (331)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567889999999998           66788999999999999999887544   48888888888877          


Q ss_pred             -----------------------CCCC-------ccccccccCCcCccCccccccC-CCCcce----------eEecCCC
Q 048710          106 -----------------------LADQ-------TYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -----------------------~~~~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~  144 (208)
                                             +-+.       ........||..|+|||.+.+. .++.++          |++||+.
T Consensus       144 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  223 (331)
T 4aaa_A          144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP  223 (331)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCC
Confidence                                   0000       1112345689999999999775 677776          9999999


Q ss_pred             CCCC
Q 048710          145 PICL  148 (208)
Q Consensus       145 p~~~  148 (208)
                      ||..
T Consensus       224 pf~~  227 (331)
T 4aaa_A          224 LFPG  227 (331)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.33  E-value=2.6e-12  Score=99.29  Aligned_cols=146  Identities=17%  Similarity=0.186  Sum_probs=94.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..+.|.+|++++.+++           .+.+..++||||+++|+|.+++.... ....+++.....++.++         
T Consensus        63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~  142 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS  142 (285)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3578999999999998           66788999999999999999996531 11258888888888777         


Q ss_pred             ---------------CC-C-----------------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ---------------LA-D-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------~~-~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                     .. +                 .........||..|+|||.+. +.++.++          |++||
T Consensus       143 ~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g  221 (285)
T 3is5_A          143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG  221 (285)
T ss_dssp             TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhC
Confidence                           00 0                 011123456899999999885 4567777          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....      ... +..............   ....    ...+.+++..||+.+ ++|||+
T Consensus       222 ~~pf~~~~------~~~-~~~~~~~~~~~~~~~---~~~~----~~~~~~li~~~L~~dP~~Rps~  273 (285)
T 3is5_A          222 CLPFTGTS------LEE-VQQKATYKEPNYAVE---CRPL----TPQAVDLLKQMLTKDPERRPSA  273 (285)
T ss_dssp             SCSSCCSS------HHH-HHHHHHHCCCCCCC-----CCC----CHHHHHHHHHHTCSCTTTSCCH
T ss_pred             CCCCCCCC------HHH-HHhhhccCCcccccc---cCcC----CHHHHHHHHHHccCChhhCcCH
Confidence            99997432      111 111111111100000   0011    234567788999999 999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.33  E-value=1.3e-12  Score=109.05  Aligned_cols=144  Identities=19%  Similarity=0.221  Sum_probs=99.1

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~  165 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH  165 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999998           67788999999999999999997643   58899888888877          


Q ss_pred             --------------CCC------------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------LAD------------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~~~------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                    ..+                  .........||+.|+|||.+. +.++.++          |++||.
T Consensus       166 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~  244 (504)
T 3q5i_A          166 NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY  244 (504)
T ss_dssp             TEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCC
Confidence                          000                  011123456899999999986 4577777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+....  +......    ....+.++...||+.+ .+|||+
T Consensus       245 ~pf~~~~------~~~-~~~~i~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~  296 (504)
T 3q5i_A          245 PPFGGQN------DQD-IIKKVEKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTA  296 (504)
T ss_dssp             CSSCCSS------HHH-HHHHHHHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCC------HHH-HHHHHHcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCH
Confidence            9997432      111 222222332210  0000011    1234567778999999 999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.33  E-value=1.4e-12  Score=101.37  Aligned_cols=146  Identities=15%  Similarity=0.173  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....|.+|+.++.+++           ...+..++|+||+++|+|.+++.....  .+++.....++.++         
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~  135 (302)
T 2j7t_A           58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHS  135 (302)
T ss_dssp             CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhc
Confidence            34578999999999988           567789999999999999999976433  58888888888877         


Q ss_pred             ---------------CCCCc----------------cccccccCCcCccCccccc-----cCCCCcce----------eE
Q 048710          106 ---------------LADQT----------------YMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------NL  139 (208)
Q Consensus       106 ---------------~~~~~----------------~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E~  139 (208)
                                     ..+..                .......||..|+|||.+.     +..++.++          |+
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l  215 (302)
T 2j7t_A          136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM  215 (302)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHH
Confidence                           00000                0112346899999999983     56677777          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||+.|+....      ......... .+.......       +......+.+++.+||+.+ ++|||+
T Consensus       216 ~~g~~p~~~~~------~~~~~~~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~  270 (302)
T 2j7t_A          216 AQIEPPHHELN------PMRVLLKIA-KSDPPTLLT-------PSKWSVEFRDFLKIALDKNPETRPSA  270 (302)
T ss_dssp             HHSSCTTTTSC------HHHHHHHHH-HSCCCCCSS-------GGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             hcCCCCCccCC------HHHHHHHHh-ccCCcccCC-------ccccCHHHHHHHHHHcccChhhCCCH
Confidence            99999987432      112222222 222111111       1112235667888999999 999986

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.33  E-value=3.2e-12  Score=100.12  Aligned_cols=154  Identities=12%  Similarity=0.070  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|++++.+++           .+.+..++||||++ |+|.+++.....  .+++.....++.++           
T Consensus        63 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~  139 (311)
T 3niz_A           63 PSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQHR  139 (311)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999998           66778999999998 588888876543  48888887777777           


Q ss_pred             ----------------------CCC-------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 ----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                            +-+       .........||+.|+|||.+.+ ..++.++          |++||+.|
T Consensus       140 ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p  219 (311)
T 3niz_A          140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL  219 (311)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCC
Confidence                                  000       1111234568999999999876 5577777          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCccccc----------------ccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEI----------------FDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....   ......+...........+                .+..-.....+.....+.++..+|++.| ++|||+
T Consensus       220 f~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  295 (311)
T 3niz_A          220 FPGVTD---DDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA  295 (311)
T ss_dssp             CCCSST---TTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCh---HHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence            974322   2222223322211110000                0000000000112235667888999999 999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.32  E-value=3.2e-12  Score=106.08  Aligned_cols=144  Identities=15%  Similarity=0.201  Sum_probs=97.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++          
T Consensus        64 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~  140 (486)
T 3mwu_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH  140 (486)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999998           67788999999999999999997643   58888888888877          


Q ss_pred             --------------C-CC-----------------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------L-AD-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~-~~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                    . .+                 .........||+.|+|||++.+ .++.++          |++||.
T Consensus       141 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~  219 (486)
T 3mwu_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGT  219 (486)
T ss_dssp             TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCC
Confidence                          0 00                 0111234568999999999875 477777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+....-. +. .    ......+.+++..||+.+ .+|||.
T Consensus       220 ~pf~~~~------~~~-~~~~i~~~~~~~~~-~~-~----~~~s~~~~~li~~~L~~dp~~R~t~  271 (486)
T 3mwu_A          220 PPFYGKN------EYD-ILKRVETGKYAFDL-PQ-W----RTISDDAKDLIRKMLTFHPSLRITA  271 (486)
T ss_dssp             CSSCCSS------HHH-HHHHHHHTCCCSCS-GG-G----GGSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCC------HHH-HHHHHHhCCCCCCC-cc-c----CCCCHHHHHHHHHHcCCChhhCcCH
Confidence            9997432      111 12222223221100 00 0    112234567778999999 999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.31  E-value=8e-13  Score=106.29  Aligned_cols=140  Identities=13%  Similarity=0.191  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHH-hhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVIL-SQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l-~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...+..|..++ ..++           .+.+..|+||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        82 ~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  158 (373)
T 2r5t_A           82 EKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL  158 (373)
T ss_dssp             ---------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45667777763 4444           67789999999999999999998643   46777666666665          


Q ss_pred             -----------------------C-------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -----------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                             +       ...........||+.|+|||++.+..++.++          |++||..|
T Consensus       159 givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  238 (373)
T 2r5t_A          159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP  238 (373)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence                                   0       0011123456799999999999998888888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ... +...+..+.+      .+....+    ..+.++...||+.+ .+||+.
T Consensus       239 f~~~~------~~~-~~~~i~~~~~------~~~~~~~----~~~~~li~~lL~~dp~~R~~~  284 (373)
T 2r5t_A          239 FYSRN------TAE-MYDNILNKPL------QLKPNIT----NSARHLLEGLLQKDRTKRLGA  284 (373)
T ss_dssp             TCCSB------HHH-HHHHHHHSCC------CCCSSSC----HHHHHHHHHHTCSSGGGSTTT
T ss_pred             CCCCC------HHH-HHHHHHhccc------CCCCCCC----HHHHHHHHHHcccCHHhCCCC
Confidence            97431      111 1222222211      1111222    24567777999999 999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.31  E-value=1.9e-12  Score=107.73  Aligned_cols=143  Identities=18%  Similarity=0.198  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..|+||||+++|+|.+++....   .+++.....++.++           
T Consensus        80 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~  156 (494)
T 3lij_A           80 NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKHN  156 (494)
T ss_dssp             THHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999988           67788999999999999999987643   57888888887777           


Q ss_pred             -------------CC-C-----------------CccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 -------------LA-D-----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------~~-~-----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                   .. +                 .........||+.|+|||.+. +.++.++          |++||..
T Consensus       157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~  235 (494)
T 3lij_A          157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP  235 (494)
T ss_dssp             EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCC
Confidence                         00 0                 011123456899999999986 4678777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +......+... ...+. ....    ...+.++...||+.+ .+|||+
T Consensus       236 pf~~~~------~~~-~~~~i~~~~~~-~~~~~-~~~~----s~~~~~li~~~L~~dp~~R~s~  286 (494)
T 3lij_A          236 PFGGQT------DQE-ILRKVEKGKYT-FDSPE-WKNV----SEGAKDLIKQMLQFDSQRRISA  286 (494)
T ss_dssp             SSCCSS------HHH-HHHHHHHTCCC-CCSGG-GTTS----CHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCC------HHH-HHHHHHhCCCC-CCchh-cccC----CHHHHHHHHHHCCCChhhCccH
Confidence            997432      111 22222222211 00111 1112    234567777999999 999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.31  E-value=3.6e-12  Score=98.87  Aligned_cols=144  Identities=19%  Similarity=0.244  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.+.+|+.++.+++            ...+..++||||+++|+|.+++.+..   .+++.....++.++          
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~  143 (298)
T 1phk_A           67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL  143 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            467899999999884            66788999999999999999998643   58888888888877          


Q ss_pred             -----------------------CC------CCccccccccCCcCccCccccc------cCCCCcce----------eEe
Q 048710          106 -----------------------LA------DQTYMTTQVQGTFGYLDLQYFQ------SSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------~~------~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ks----------E~~  140 (208)
                                             +-      ..........||..|+|||.+.      ...++.++          |++
T Consensus       144 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~  223 (298)
T 1phk_A          144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  223 (298)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHH
Confidence                                   00      0111123456899999999985      34566666          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..||....      ... .......+... ...+.     .......+.++..+||+.+ .+|||+
T Consensus       224 ~g~~p~~~~~------~~~-~~~~~~~~~~~-~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~  278 (298)
T 1phk_A          224 AGSPPFWHRK------QML-MLRMIMSGNYQ-FGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTA  278 (298)
T ss_dssp             HSSCSSCCSS------HHH-HHHHHHHTCCC-CCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HCCCCCcCcc------HHH-HHHHHhcCCcc-cCccc-----ccccCHHHHHHHHHHccCCcccCCCH
Confidence            9999987431      111 11222222211 00111     1122345667888999999 999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.31  E-value=7.1e-13  Score=103.73  Aligned_cols=145  Identities=12%  Similarity=0.142  Sum_probs=93.4

Q ss_pred             hhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           45 EGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ......|.+|+.++.+++             .+.+..++||| +.+|+|.+++....   .+++..+..++.++      
T Consensus        67 ~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~  142 (313)
T 3cek_A           67 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHT  142 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHH
Confidence            345678999999999885             56778999999 67899999998653   57888888888777      


Q ss_pred             --------------------------CCCCc---------cccccccCCcCccCcccccc-----------CCCCcce--
Q 048710          106 --------------------------LADQT---------YMTTQVQGTFGYLDLQYFQS-----------SPFTEKS--  137 (208)
Q Consensus       106 --------------------------~~~~~---------~~~~~~~gt~~y~aPE~~~~-----------~~~~~ks--  137 (208)
                                                +-+..         .......||+.|+|||.+.+           ..++.++  
T Consensus       143 LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di  222 (313)
T 3cek_A          143 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV  222 (313)
T ss_dssp             HHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHH
T ss_pred             HHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHH
Confidence                                      00000         01123468999999999875           3566666  


Q ss_pred             --------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                              |++||+.||....     .-...+.......         .....+......+.+++.+||+.+ .+|||+
T Consensus       223 ~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  287 (313)
T 3cek_A          223 WSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISI  287 (313)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHHHHHHhCCCchhhHH-----HHHHHHHHHHhcc---------cccCCcccchHHHHHHHHHHccCCcccCcCH
Confidence                    9999999987321     1111222222111         111111111235667778999999 999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.31  E-value=4e-13  Score=104.94  Aligned_cols=100  Identities=13%  Similarity=0.077  Sum_probs=72.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.++.+++           .+.+..++||||+++|+|.+++....   .+++.....++.++          
T Consensus        45 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~  121 (311)
T 4agu_A           45 IKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH  121 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567899999999988           66788999999999999999987653   48888888887777          


Q ss_pred             -----------------------CCC-------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCC
Q 048710          106 -----------------------LAD-------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -----------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~  144 (208)
                                             +-+       .........||..|+|||.+.+ ..++.++          |++||+.
T Consensus       122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  201 (311)
T 4agu_A          122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP  201 (311)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence                                   000       1111234568999999999976 5667777          9999999


Q ss_pred             CCCCC
Q 048710          145 PICLT  149 (208)
Q Consensus       145 p~~~~  149 (208)
                      ||...
T Consensus       202 p~~~~  206 (311)
T 4agu_A          202 LWPGK  206 (311)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99743

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.31  E-value=2.9e-12  Score=101.62  Aligned_cols=152  Identities=14%  Similarity=0.254  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhH------hhcCCCCCCCCHHHHHHHHHhC------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQY------INNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~------l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ..|.+|+.++.+++           .+.+..++||||+++|+|.++      +...... .+++..+..++.++      
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~  166 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC-FIPIQVIKCIIKSVLNSFSY  166 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcccc-CCCHHHHHHHHHHHHHHHHH
Confidence            78999999999998           667899999999999999999      6543222 68999888887766      


Q ss_pred             --C-----------------C---------CC-----ccccccccCCcCccCccccccC-CCCc-ce----------eEe
Q 048710          106 --L-----------------A---------DQ-----TYMTTQVQGTFGYLDLQYFQSS-PFTE-KS----------NLL  140 (208)
Q Consensus       106 --~-----------------~---------~~-----~~~~~~~~gt~~y~aPE~~~~~-~~~~-ks----------E~~  140 (208)
                        .                 .         +.     ........||..|+|||.+.+. .++. ++          |++
T Consensus       167 lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~  246 (348)
T 2pml_X          167 IHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF  246 (348)
T ss_dssp             HHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred             HhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH
Confidence              0                 0         00     1112345689999999999876 5655 55          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCccccc------ccccccc---cCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI------FDGLVLK---EGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~d~~l~~---~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||..||.....     ... .......+....-      ..+....   .........+.+++.+||+.+ .+|||+
T Consensus       247 ~g~~pf~~~~~-----~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~  317 (348)
T 2pml_X          247 YNVVPFSLKIS-----LVE-LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS  317 (348)
T ss_dssp             HSSCSSCCSSC-----SHH-HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hCCCCCCCCCc-----HHH-HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCH
Confidence            99999974321     111 1222222211100      0000000   000122345677888999999 999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.31  E-value=3.4e-13  Score=105.61  Aligned_cols=152  Identities=14%  Similarity=0.145  Sum_probs=96.3

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+.+|+.++.++.            .+.+..++||||+++|+|.+++....   .+++.....++.++         
T Consensus        53 ~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~  129 (316)
T 2ac3_A           53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHN  129 (316)
T ss_dssp             CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3568999999998853            66788999999999999999998643   57888888887777         


Q ss_pred             ---------------CCCCc--------------------------cccccccCCcCccCcccccc-----CCCCcce--
Q 048710          106 ---------------LADQT--------------------------YMTTQVQGTFGYLDLQYFQS-----SPFTEKS--  137 (208)
Q Consensus       106 ---------------~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~-----~~~~~ks--  137 (208)
                                     ..+..                          .......||+.|+|||.+.+     ..++.++  
T Consensus       130 ~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di  209 (316)
T 2ac3_A          130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL  209 (316)
T ss_dssp             TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHH
T ss_pred             CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCccccc
Confidence                           00000                          00112348999999999875     4566676  


Q ss_pred             --------eEecCCCCCCCCCccCCcc--------HHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC
Q 048710          138 --------NLLTKEKPICLTTYEENKS--------LTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN  201 (208)
Q Consensus       138 --------E~~tg~~p~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~  201 (208)
                              |++||+.||..........        ....+......+... ..++ ...    .....+.++..+||+.+
T Consensus       210 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-~~~----~~~~~~~~li~~~L~~d  283 (316)
T 2ac3_A          210 WSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE-FPDK-DWA----HISCAAKDLISKLLVRD  283 (316)
T ss_dssp             HHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCC-CCHH-HHT----TSCHHHHHHHHHHSCSS
T ss_pred             HhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcc-cCch-hcc----cCCHHHHHHHHHHhhCC
Confidence                    9999999997543211000        011122222222110 0000 000    12235667888999999


Q ss_pred             -CCCCCC
Q 048710          202 -EKKPTM  207 (208)
Q Consensus       202 -~~RPsm  207 (208)
                       ++|||+
T Consensus       284 P~~Rps~  290 (316)
T 2ac3_A          284 AKQRLSA  290 (316)
T ss_dssp             TTTSCCH
T ss_pred             hhhCCCH
Confidence             999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.30  E-value=1.9e-12  Score=107.31  Aligned_cols=145  Identities=16%  Similarity=0.176  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....+.+|+.++.+++           .+.+..++|+||+++|+|.+++....   .+++.....++.++         
T Consensus        68 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~  144 (484)
T 3nyv_A           68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHK  144 (484)
T ss_dssp             SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            34678999999999998           67788999999999999999998654   58888888888877         


Q ss_pred             ---------------C--CC----------------CccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 ---------------L--AD----------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 ---------------~--~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                     .  ..                .........||+.|+|||.+.+ .++.++          |++||
T Consensus       145 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g  223 (484)
T 3nyv_A          145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG  223 (484)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHC
Confidence                           0  00                0111234568999999999865 578777          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||....      ... +......+....-. +. .    ......+.++...||+.+ .+|||+
T Consensus       224 ~~pf~~~~------~~~-~~~~i~~~~~~~~~-~~-~----~~~s~~~~~li~~~L~~dp~~R~s~  276 (484)
T 3nyv_A          224 CPPFNGAN------EYD-ILKKVEKGKYTFEL-PQ-W----KKVSESAKDLIRKMLTYVPSMRISA  276 (484)
T ss_dssp             SCSSCCSS------HHH-HHHHHHHCCCCCCS-GG-G----GGSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCC------HHH-HHHHHHcCCCCCCC-cc-c----ccCCHHHHHHHHHHCCCChhHCcCH
Confidence            99997432      111 22222233221000 00 0    112234567777999999 999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.30  E-value=8.4e-12  Score=98.21  Aligned_cols=100  Identities=10%  Similarity=0.150  Sum_probs=76.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ....+.+|+.++.+++                 ...+..++||||+ +|+|.+++...... .+++.....++.++    
T Consensus        54 ~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~~l  131 (339)
T 1z57_A           54 YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFL-PFRLDHIRKMAYQICKSV  131 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCC-CCcHHHHHHHHHHHHHHH
Confidence            3567889999988876                 4567899999999 89999999875432 58888888888777    


Q ss_pred             --------------------CC-------------------CC-------------ccccccccCCcCccCccccccCCC
Q 048710          106 --------------------LA-------------------DQ-------------TYMTTQVQGTFGYLDLQYFQSSPF  133 (208)
Q Consensus       106 --------------------~~-------------------~~-------------~~~~~~~~gt~~y~aPE~~~~~~~  133 (208)
                                          ..                   +.             ........||+.|+|||.+.+..+
T Consensus       132 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  211 (339)
T 1z57_A          132 NFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGW  211 (339)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCC
T ss_pred             HHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCC
Confidence                                11                   00             000123568999999999998888


Q ss_pred             Ccce----------eEecCCCCCCC
Q 048710          134 TEKS----------NLLTKEKPICL  148 (208)
Q Consensus       134 ~~ks----------E~~tg~~p~~~  148 (208)
                      +.++          |++||..||..
T Consensus       212 ~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          212 SQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCC
Confidence            8888          99999999974

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.30  E-value=1.2e-12  Score=102.44  Aligned_cols=139  Identities=10%  Similarity=0.018  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|+..+.++.            .+.+..++||||+ +|+|.+++.....  .++|..+..++.++         
T Consensus        99 ~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  175 (311)
T 3p1a_A           99 DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHS  175 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3456677777776652            6778899999999 7899999986543  59999999888887         


Q ss_pred             ------------------------C------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------L------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------~------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                              +      .+.........||++|+|||++.+ .++.++          |++||..|
T Consensus       176 ~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~  254 (311)
T 3p1a_A          176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL  254 (311)
T ss_dssp             TTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred             CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence                                    0      001111234568999999999875 678777          99999766


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +...         . .......+...    +.+..    .....+.+++..||+.+ ++|||+
T Consensus       255 ~~~~---------~-~~~~~~~~~~~----~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~  299 (311)
T 3p1a_A          255 PHGG---------E-GWQQLRQGYLP----PEFTA----GLSSELRSVLVMMLEPDPKLRATA  299 (311)
T ss_dssp             CSSH---------H-HHHHHTTTCCC----HHHHT----TSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCc---------c-HHHHHhccCCC----ccccc----CCCHHHHHHHHHHcCCChhhCcCH
Confidence            5421         0 11122222211    11111    12345677888999999 999986

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=103.39  Aligned_cols=134  Identities=17%  Similarity=0.246  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCC-ChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNG-TVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~G-sL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...|.+|+.++.+++           .+.+..++||||+.+| +|.+++....   .+++..+..++.++          
T Consensus        73 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~  149 (335)
T 3dls_A           73 LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK  149 (335)
T ss_dssp             TEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            446888999999998           6778899999999887 9999998654   58898888888877          


Q ss_pred             -----------------------C------CCCccccccccCCcCccCccccccCCC-Ccce----------eEecCCCC
Q 048710          106 -----------------------L------ADQTYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------~------~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~p  145 (208)
                                             +      ...........||+.|+|||.+.+..+ +.++          |++||..|
T Consensus       150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  229 (335)
T 3dls_A          150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP  229 (335)
T ss_dssp             TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCc
Confidence                                   0      001111234568999999999988776 5665          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |.....                 .    ....+..  +......+.+++..||+.+ .+|||+
T Consensus       230 f~~~~~-----------------~----~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~  269 (335)
T 3dls_A          230 FCELEE-----------------T----VEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTL  269 (335)
T ss_dssp             CSSGGG-----------------G----TTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhhHHH-----------------H----HhhccCC--CcccCHHHHHHHHHHccCChhhCcCH
Confidence            873210                 0    0000000  1111234567788999999 999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.29  E-value=6.6e-12  Score=99.23  Aligned_cols=154  Identities=14%  Similarity=0.242  Sum_probs=98.1

Q ss_pred             chhhHHHHHHHHHHHhhc--c-----------cCC----CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-
Q 048710           44 YEGKVNKLINEVVILSQI--N-----------LET----EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l--~-----------~~~----~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-  105 (208)
                      .......+.+|.+++..+  +           ...    ...++|+||+++|+|.+++.+.    .+++..+..++.++ 
T Consensus        74 ~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~  149 (342)
T 1b6c_B           74 SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTA  149 (342)
T ss_dssp             CGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHH
Confidence            334556789999999873  3           222    2789999999999999999763    48888888777766 


Q ss_pred             ------C-------------------------CC---------Cc------c-----ccccccCCcCccCccccccCC--
Q 048710          106 ------L-------------------------AD---------QT------Y-----MTTQVQGTFGYLDLQYFQSSP--  132 (208)
Q Consensus       106 ------~-------------------------~~---------~~------~-----~~~~~~gt~~y~aPE~~~~~~--  132 (208)
                            .                         .+         ..      .     ......||+.|+|||.+.+..  
T Consensus       150 ~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  229 (342)
T 1b6c_B          150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM  229 (342)
T ss_dssp             HHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCT
T ss_pred             HHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccc
Confidence                  0                         00         00      0     112346899999999997652  


Q ss_pred             ----CCcce----------eEecC----------CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccC-cHHHH
Q 048710          133 ----FTEKS----------NLLTK----------EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEG-GKDEI  187 (208)
Q Consensus       133 ----~~~ks----------E~~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~  187 (208)
                          ++.++          |++||          ..||...... ...... +......+..    .+.+.... +.+..
T Consensus       230 ~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~-~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~  303 (342)
T 1b6c_B          230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS-DPSVEE-MRKVVCEQKL----RPNIPNRWQSCEAL  303 (342)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS-SCCHHH-HHHHHTTSCC----CCCCCGGGGTSHHH
T ss_pred             cccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC-cccHHH-HHHHHHHHHh----CCCCcccccchhHH
Confidence                22444          99999          6777643221 112222 2222222222    22222211 23666


Q ss_pred             HHHHHHHHHhhcCC-CCCCCC
Q 048710          188 VVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       188 ~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..+.+++.+||+.+ ++|||+
T Consensus       304 ~~l~~li~~cl~~dp~~Rps~  324 (342)
T 1b6c_B          304 RVMAKIMRECWYANGAARLTA  324 (342)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHHHHHHhccChhhCCCH
Confidence            77889999999999 999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.29  E-value=6.3e-12  Score=98.12  Aligned_cols=98  Identities=14%  Similarity=0.208  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHhhcc---------------cCCC----eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN---------------LETE----VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~---------------~~~~----~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++.+++               ....    ..++||||+. |+|.+++...... .+++.....++.++    
T Consensus        56 ~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al  133 (308)
T 3g33_A           56 ISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPP-GLPAETIKDLMRQFLRGL  133 (308)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCC-CCCHHHHHHHHHHHHHHH
Confidence            45677887777664               1111    5799999998 6999999876543 58999998888887    


Q ss_pred             -----------------------------C------CCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------------------L------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------~------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                   +      ...........||+.|+|||.+.+..++.++          |++
T Consensus       134 ~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  213 (308)
T 3g33_A          134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF  213 (308)
T ss_dssp             HHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT
T ss_pred             HHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH
Confidence                                         0      0111122456789999999999998898888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       214 ~g~~pf~~  221 (308)
T 3g33_A          214 RRKPLFCG  221 (308)
T ss_dssp             TSSCSCCC
T ss_pred             hCCCCCCC
Confidence            99999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.29  E-value=2.4e-12  Score=104.72  Aligned_cols=95  Identities=15%  Similarity=0.251  Sum_probs=73.1

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      .|.+|..++..++           .+.+..|+||||+++|+|.+++++.    .+++.....++.++             
T Consensus       115 ~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~giv  190 (410)
T 3v8s_A          115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFI  190 (410)
T ss_dssp             THHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            4889999999988           6788899999999999999999764    36777666666665             


Q ss_pred             --------------------C--------CCCccccccccCCcCccCccccccCC----CCcce----------eEecCC
Q 048710          106 --------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSSP----FTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ks----------E~~tg~  143 (208)
                                          +        ...........||+.|+|||++.+..    ++.++          |++||+
T Consensus       191 HrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~  270 (410)
T 3v8s_A          191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD  270 (410)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSS
T ss_pred             eccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCC
Confidence                                0        00111223567999999999998655    56666          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||..
T Consensus       271 ~Pf~~  275 (410)
T 3v8s_A          271 TPFYA  275 (410)
T ss_dssp             CTTCC
T ss_pred             CCCCC
Confidence            99974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.28  E-value=4.4e-12  Score=99.29  Aligned_cols=149  Identities=13%  Similarity=0.190  Sum_probs=95.1

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------c----CCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC---
Q 048710           45 EGKVNKLINEVVILSQIN-----------L----ETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~----~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i---  105 (208)
                      ....+.|.+|+.++.+++           .    ..+..++|+||+++|+|.+++.... ....+++.....++.++   
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  146 (317)
T 2buj_A           67 QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG  146 (317)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            345678999999999988           1    3457889999999999999997521 12268999998888887   


Q ss_pred             ---------------------CCCC---------cc----------------ccccccCCcCccCccccccCC---CCcc
Q 048710          106 ---------------------LADQ---------TY----------------MTTQVQGTFGYLDLQYFQSSP---FTEK  136 (208)
Q Consensus       106 ---------------------~~~~---------~~----------------~~~~~~gt~~y~aPE~~~~~~---~~~k  136 (208)
                                           ..+.         ..                ......||+.|+|||.+.+..   ++.+
T Consensus       147 L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  226 (317)
T 2buj_A          147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER  226 (317)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTH
T ss_pred             HHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCch
Confidence                                 0000         00                001234689999999987543   5666


Q ss_pred             e----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          137 S----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       137 s----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      +          |++||+.||....... ..+..    ..... .        ....+......+.+++..||+.+ .+||
T Consensus       227 ~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~----~~~~~-~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rp  292 (317)
T 2buj_A          227 TDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVAL----AVQNQ-L--------SIPQSPRHSSALWQLLNSMMTVDPHQRP  292 (317)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHH----HHHCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhHHHHHHHHHHHHhCCCChhhhhccc-chhhH----Hhhcc-C--------CCCccccCCHHHHHHHHHHhhcChhhCC
Confidence            6          9999999986311001 11111    11111 0        00111122345677888999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       293 s~  294 (317)
T 2buj_A          293 HI  294 (317)
T ss_dssp             CH
T ss_pred             CH
Confidence            86

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.28  E-value=1.6e-12  Score=105.84  Aligned_cols=98  Identities=20%  Similarity=0.285  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ..|.+|..++.+++           .+.+..||||||+++|+|.++|.+...  .+++.....++.++            
T Consensus       106 ~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~gi  183 (412)
T 2vd5_A          106 SCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRLGY  183 (412)
T ss_dssp             CCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45889999999887           677889999999999999999986432  47887777666666            


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccc-------cCCCCcce----------eE
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQ-------SSPFTEKS----------NL  139 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~ks----------E~  139 (208)
                                                   ..+.........||+.|+|||++.       +..++.++          |+
T Consensus       184 iHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyel  263 (412)
T 2vd5_A          184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM  263 (412)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHH
T ss_pred             eecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHH
Confidence                                         001111123457999999999997       35667777          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      +||+.||..
T Consensus       264 ltG~~Pf~~  272 (412)
T 2vd5_A          264 FYGQTPFYA  272 (412)
T ss_dssp             HHSSCTTCC
T ss_pred             HhCCCCCCC
Confidence            999999974

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=2.5e-11  Score=95.60  Aligned_cols=152  Identities=14%  Similarity=0.183  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHhhc--c-----------cCC----CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQI--N-----------LET----EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l--~-----------~~~----~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+..|.+++..+  +           ...    +..++||||+++|+|.+++...    .+++.....++.++   
T Consensus        71 ~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~  146 (337)
T 3mdy_A           71 TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSG  146 (337)
T ss_dssp             GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHH
T ss_pred             cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHH
Confidence            3445667777777665  3           222    6889999999999999999764    48888887777655   


Q ss_pred             -----CC------------------------C---------Cc-------c----ccccccCCcCccCccccccCCCCcc
Q 048710          106 -----LA------------------------D---------QT-------Y----MTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus       106 -----~~------------------------~---------~~-------~----~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                           ..                        +         ..       .    ......||+.|+|||.+.+...+.+
T Consensus       147 l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  226 (337)
T 3mdy_A          147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH  226 (337)
T ss_dssp             HHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTC
T ss_pred             HHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcc
Confidence                 00                        0         00       0    0113468999999999987766655


Q ss_pred             ------e----------eEecC----------CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccC-cHHHHHH
Q 048710          137 ------S----------NLLTK----------EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEG-GKDEIVV  189 (208)
Q Consensus       137 ------s----------E~~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~  189 (208)
                            +          |++||          ..||........  ..............    .+.+.... +.+....
T Consensus       227 ~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  300 (337)
T 3mdy_A          227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMREIVCIKKL----RPSFPNRWSSDECLRQ  300 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--CHHHHHHHHTTSCC----CCCCCGGGGGSHHHHH
T ss_pred             ccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC--chhhhHHHHhhhcc----CccccccchhhHHHHH
Confidence                  4          99999          666653322111  11222222222211    22221111 2366777


Q ss_pred             HHHHHHHhhcCC-CCCCCC
Q 048710          190 VVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       190 ~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.+++.+||+.+ .+|||+
T Consensus       301 l~~li~~~l~~dP~~Rps~  319 (337)
T 3mdy_A          301 MGKLMTECWAHNPASRLTA  319 (337)
T ss_dssp             HHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHHHHhhhhChhhCCCH
Confidence            889999999999 999986

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.27  E-value=2e-11  Score=95.83  Aligned_cols=100  Identities=11%  Similarity=0.154  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC---CCCCCCHHHHHHHHHhC--------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN---EEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~---~~~~l~~~~r~~i~~~i--------  105 (208)
                      ...+.+|+.++.+++           ...+..++||||++ |+|.+++....   ....+++.....++.++        
T Consensus        47 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH  125 (317)
T 2pmi_A           47 PSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH  125 (317)
T ss_dssp             CHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            467899999999998           66788999999999 69999986531   12257888777666666        


Q ss_pred             -------------------------CCC-------CccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 -------------------------LAD-------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------------~~~-------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                               +-+       .........||+.|+|||.+.+ ..++.++          |++||
T Consensus       126 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  205 (317)
T 2pmi_A          126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG  205 (317)
T ss_dssp             HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                                     000       0111234568999999999876 4577777          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       206 ~~pf~~  211 (317)
T 2pmi_A          206 KPLFPG  211 (317)
T ss_dssp             SCSCCC
T ss_pred             CCCCCC
Confidence            999974

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.27  E-value=6.1e-12  Score=97.30  Aligned_cols=98  Identities=11%  Similarity=0.129  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++||||+++ +|.+++.....  .+++.....++.++           
T Consensus        44 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           44 PSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             CHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999998           667889999999985 99999986543  58888888887777           


Q ss_pred             -------------CCC----------------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCC
Q 048710          106 -------------LAD----------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p  145 (208)
                                   ..+                .........||+.|+|||.+.+ ..++.++          |++||+.|
T Consensus       121 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  200 (288)
T 1ob3_A          121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL  200 (288)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                         000                0111233468999999999876 4577777          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       201 f~~  203 (288)
T 1ob3_A          201 FPG  203 (288)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.26  E-value=2e-11  Score=97.24  Aligned_cols=102  Identities=15%  Similarity=0.109  Sum_probs=78.3

Q ss_pred             hhhHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           45 EGKVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ....+.+..|+.++.+++                ...+..++||||+ +|+|.+++...... .+++.....++.++   
T Consensus        72 ~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~a  149 (360)
T 3llt_A           72 KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKA  149 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHH
Confidence            344567888999998874                5668899999999 99999999875433 58888888887777   


Q ss_pred             ---------------------CC-------------------------CC-------------ccccccccCCcCccCcc
Q 048710          106 ---------------------LA-------------------------DQ-------------TYMTTQVQGTFGYLDLQ  126 (208)
Q Consensus       106 ---------------------~~-------------------------~~-------------~~~~~~~~gt~~y~aPE  126 (208)
                                           ..                         +.             ........||+.|+|||
T Consensus       150 L~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE  229 (360)
T 3llt_A          150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPE  229 (360)
T ss_dssp             HHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHH
T ss_pred             HHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcH
Confidence                                 10                         00             00112456899999999


Q ss_pred             ccccCCCCcce----------eEecCCCCCCC
Q 048710          127 YFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       127 ~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                      .+.+..++.++          |++||+.||..
T Consensus       230 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          230 VILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             HHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            99999999888          99999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.26  E-value=2.2e-11  Score=96.48  Aligned_cols=101  Identities=10%  Similarity=0.122  Sum_probs=75.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+.+|+.++.+++                 ...+..++||||+ +|+|.+++...... .+++.....++.++   
T Consensus        58 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~-~~~~~~~~~i~~qi~~~  135 (355)
T 2eu9_A           58 KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQ-PYPLPHVRHMAYQLCHA  135 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCC-CCCHHHHHHHHHHHHHH
Confidence            34567888999998876                 4467889999999 67777877664432 58899888888887   


Q ss_pred             --------------------C-C------------------CC--------------ccccccccCCcCccCccccccCC
Q 048710          106 --------------------L-A------------------DQ--------------TYMTTQVQGTFGYLDLQYFQSSP  132 (208)
Q Consensus       106 --------------------~-~------------------~~--------------~~~~~~~~gt~~y~aPE~~~~~~  132 (208)
                                          . .                  ..              ........||+.|+|||.+.+..
T Consensus       136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (355)
T 2eu9_A          136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELG  215 (355)
T ss_dssp             HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCC
Confidence                                0 0                  00              00112456899999999999888


Q ss_pred             CCcce----------eEecCCCCCCC
Q 048710          133 FTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       133 ~~~ks----------E~~tg~~p~~~  148 (208)
                      ++.++          |++||..||..
T Consensus       216 ~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          216 WAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCccchHHHHHHHHHHHhCCCCCCC
Confidence            88888          99999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.26  E-value=9.1e-12  Score=96.88  Aligned_cols=142  Identities=13%  Similarity=0.136  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           47 KVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....|.+|+.++.+++             .+.+..++||||+++| |.+++...... .+++.....++.++        
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHHH
Confidence            3567999999999998             2345789999999987 77777654332 68898888888777        


Q ss_pred             ----------------CC------------------CCccccccccCCcCccCccccccCCC--Ccce----------eE
Q 048710          106 ----------------LA------------------DQTYMTTQVQGTFGYLDLQYFQSSPF--TEKS----------NL  139 (208)
Q Consensus       106 ----------------~~------------------~~~~~~~~~~gt~~y~aPE~~~~~~~--~~ks----------E~  139 (208)
                                      ..                  ..........||..|+|||.+.+...  +.++          |+
T Consensus       127 ~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l  206 (305)
T 2wtk_C          127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI  206 (305)
T ss_dssp             HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHH
T ss_pred             HCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHH
Confidence                            00                  00111224458999999999876433  4455          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +||+.||....      ... .......+..      .+...++    ..+.+++.+||+.+ .+|||+
T Consensus       207 ~~g~~p~~~~~------~~~-~~~~i~~~~~------~~~~~~~----~~l~~li~~~l~~dp~~Rps~  258 (305)
T 2wtk_C          207 TTGLYPFEGDN------IYK-LFENIGKGSY------AIPGDCG----PPLSDLLKGMLEYEPAKRFSI  258 (305)
T ss_dssp             HHSSCSCCCSS------HHH-HHHHHHHCCC------CCCSSSC----HHHHHHHHHHTCSSTTTSCCH
T ss_pred             HhCCCCCCCch------HHH-HHHHHhcCCC------CCCCccC----HHHHHHHHHHccCChhhCCCH
Confidence            99999987421      112 2222222211      1112222    34567788999999 999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.25  E-value=1.8e-12  Score=101.52  Aligned_cols=143  Identities=14%  Similarity=0.148  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.++.+++           .+.+..++|+||+++|+|.+++.+...  .+++.....++.++           
T Consensus        73 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~  150 (319)
T 2y4i_B           73 LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKG  150 (319)
T ss_dssp             CCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356888999999888           667789999999999999999987543  58888888888877           


Q ss_pred             ---------------------CCCC------------ccccccccCCcCccCcccccc---------CCCCcce------
Q 048710          106 ---------------------LADQ------------TYMTTQVQGTFGYLDLQYFQS---------SPFTEKS------  137 (208)
Q Consensus       106 ---------------------~~~~------------~~~~~~~~gt~~y~aPE~~~~---------~~~~~ks------  137 (208)
                                           +-+.            ........||..|+|||.+.+         ..++.++      
T Consensus       151 i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG  230 (319)
T 2y4i_B          151 ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG  230 (319)
T ss_dssp             CCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred             ccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence                                 0000            011123348899999999875         3356666      


Q ss_pred             ----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |++||+.||....      ... +......+.........    .    ...+.+++..||+.+ .+|||+
T Consensus       231 ~il~el~~g~~p~~~~~------~~~-~~~~~~~~~~~~~~~~~----~----~~~l~~li~~~l~~~p~~Rpt~  290 (319)
T 2y4i_B          231 TIWYELHAREWPFKTQP------AEA-IIWQMGTGMKPNLSQIG----M----GKEISDILLFCWAFEQEERPTF  290 (319)
T ss_dssp             HHHHHHHHSSCSSSSCC------HHH-HHHHHHTTCCCCCCCSS----C----CTTHHHHHHHHHCSSTTTSCCH
T ss_pred             HHHHHHHhCCCCCCCCC------HHH-HHHHhccCCCCCCCcCC----C----CHHHHHHHHHHhcCChhhCcCH
Confidence                9999999987432      111 11222222222111111    1    124567888999999 999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.25  E-value=2.3e-12  Score=101.28  Aligned_cols=144  Identities=16%  Similarity=0.200  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           49 NKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      ..|.+|++++.+++          ...+..++||||+++|+|.+++....   .+++.....++.++             
T Consensus        60 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~iv  136 (322)
T 2ycf_A           60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGII  136 (322)
T ss_dssp             -CHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhHHHHHHHHHhCCCCCCceEeeEEcCCceEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            46899999999998          33455899999999999999997643   57888887777776             


Q ss_pred             -----------CC-CC-----------c------cccccccCCcCccCccccc---cCCCCcce----------eEecCC
Q 048710          106 -----------LA-DQ-----------T------YMTTQVQGTFGYLDLQYFQ---SSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -----------~~-~~-----------~------~~~~~~~gt~~y~aPE~~~---~~~~~~ks----------E~~tg~  143 (208)
                                 .. +.           .      .......||..|+|||.+.   +..++.++          |++||.
T Consensus       137 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~  216 (322)
T 2ycf_A          137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY  216 (322)
T ss_dssp             CCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence                       10 00           0      0012345899999999974   45667777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||.....  ...+...+    ..+...  ..+.+...    ....+.+++.+||+.+ ++|||+
T Consensus       217 ~pf~~~~~--~~~~~~~~----~~~~~~--~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~  269 (322)
T 2ycf_A          217 PPFSEHRT--QVSLKDQI----TSGKYN--FIPEVWAE----VSEKALDLVKKLLVVDPKARFTT  269 (322)
T ss_dssp             CSSCSTTC--SSCHHHHH----HHTCCC--CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCcccch--HHHHHHHH----HhCccc--cCchhhhh----cCHHHHHHHHHHcccCHhhCCCH
Confidence            99974321  11222222    222111  01111111    2245667888999999 999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.24  E-value=3.1e-12  Score=98.43  Aligned_cols=143  Identities=13%  Similarity=0.112  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC-CCCCCHHHHHHHHHhC-------
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE-EFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~l~~~~r~~i~~~i-------  105 (208)
                      ....++.+|+..+.++ +           .+.+..++||||+++|+|.+++..... ...+++.....++.++       
T Consensus        52 ~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  131 (289)
T 1x8b_A           52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI  131 (289)
T ss_dssp             HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999988 4           667899999999999999999976421 1258899888888887       


Q ss_pred             -----------------CCCC-------------------c------------cccccccCCcCccCccccccC-CCCcc
Q 048710          106 -----------------LADQ-------------------T------------YMTTQVQGTFGYLDLQYFQSS-PFTEK  136 (208)
Q Consensus       106 -----------------~~~~-------------------~------------~~~~~~~gt~~y~aPE~~~~~-~~~~k  136 (208)
                                       ..+.                   .            .......||..|+|||.+.+. .++.+
T Consensus       132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  211 (289)
T 1x8b_A          132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPK  211 (289)
T ss_dssp             HHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHH
T ss_pred             HhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCch
Confidence                             1000                   0            001234589999999999765 55566


Q ss_pred             e----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          137 S----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       137 s----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      +          |+++|..|+...      ..    ......+...     .+....+    ..+.+++..||+.+ ++||
T Consensus       212 ~Di~slG~il~~l~~~~~~~~~~------~~----~~~~~~~~~~-----~~~~~~~----~~~~~li~~~l~~dp~~Rp  272 (289)
T 1x8b_A          212 ADIFALALTVVCAAGAEPLPRNG------DQ----WHEIRQGRLP-----RIPQVLS----QEFTELLKVMIHPDPERRP  272 (289)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCSSS------HH----HHHHHTTCCC-----CCSSCCC----HHHHHHHHHHTCSSGGGSC
T ss_pred             hhHHHHHHHHHHHhcCCCCCcch------hH----HHHHHcCCCC-----CCCcccC----HHHHHHHHHHhCCCcccCC
Confidence            6          999888765421      11    1122222221     1222222    34567788999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       273 s~  274 (289)
T 1x8b_A          273 SA  274 (289)
T ss_dssp             CH
T ss_pred             CH
Confidence            86

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.24  E-value=8.1e-12  Score=98.13  Aligned_cols=145  Identities=16%  Similarity=0.203  Sum_probs=91.1

Q ss_pred             hHHHHHHHHHHHhhcc------------cC------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           47 KVNKLINEVVILSQIN------------LE------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ....+.+|+.++.++.            ..      .+..++||||+++|+|.+++...... .+++.....++.++   
T Consensus        63 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~  141 (326)
T 2x7f_A           63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRG  141 (326)
T ss_dssp             TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccC-CCCHHHHHHHHHHHHHH
Confidence            4567999999999883            11      57899999999999999999865322 57888777777766   


Q ss_pred             ------------------------------CCCC-------ccccccccCCcCccCccccc-----cCCCCcce------
Q 048710          106 ------------------------------LADQ-------TYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS------  137 (208)
Q Consensus       106 ------------------------------~~~~-------~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks------  137 (208)
                                                    +-+.       ........||..|+|||.+.     +..++.++      
T Consensus       142 l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  221 (326)
T 2x7f_A          142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  221 (326)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHH
T ss_pred             HHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHH
Confidence                                          0000       01112346899999999986     45667777      


Q ss_pred             ----eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ----NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ----E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                          |++||..||....      ......... .+.......+    .++    ..+.++..+||+.+ .+||++
T Consensus       222 ~il~~l~~g~~p~~~~~------~~~~~~~~~-~~~~~~~~~~----~~~----~~l~~li~~~l~~dp~~Rps~  281 (326)
T 2x7f_A          222 ITAIEMAEGAPPLCDMH------PMRALFLIP-RNPAPRLKSK----KWS----KKFQSFIESCLVKNHSQRPAT  281 (326)
T ss_dssp             HHHHHHHHSSCTTTTSC------HHHHHHHHH-HSCCCCCSCS----CSC----HHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHHHhCCCCCCCCc------HHHHHHHhh-cCccccCCcc----ccC----HHHHHHHHHHhccChhhCCCH
Confidence                9999999987432      111111111 2211111111    122    34567777999999 999985

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.23  E-value=5.9e-11  Score=95.52  Aligned_cols=100  Identities=18%  Similarity=0.171  Sum_probs=75.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           47 KVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ...++..|+.++..++                 ...+..++||||++ |+|.+++...... .+++.....++.++    
T Consensus        93 ~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al  170 (382)
T 2vx3_A           93 FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFR-GVSLNLTRKFAQQMCTAL  170 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcC-CCCHHHHHHHHHHHHHHH
Confidence            3567888888888765                 44678999999996 6999999875432 58888888877776    


Q ss_pred             ----------------------CCC-C--------------ccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 ----------------------LAD-Q--------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 ----------------------~~~-~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                            ..+ .              ........||+.|+|||++.+..++.++          |
T Consensus       171 ~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  250 (382)
T 2vx3_A          171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVE  250 (382)
T ss_dssp             HHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHH
Confidence                                  000 0              0011345689999999999998899888          9


Q ss_pred             EecCCCCCCC
Q 048710          139 LLTKEKPICL  148 (208)
Q Consensus       139 ~~tg~~p~~~  148 (208)
                      ++||+.||..
T Consensus       251 lltg~~pf~~  260 (382)
T 2vx3_A          251 MHTGEPLFSG  260 (382)
T ss_dssp             HHHSSCSSCC
T ss_pred             HHhCCCCCCC
Confidence            9999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.23  E-value=6.2e-12  Score=97.17  Aligned_cols=144  Identities=14%  Similarity=0.203  Sum_probs=96.7

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|++++.+++           ...+..++|+||+++|+|.+++....   .+++.....++.++          
T Consensus        64 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~  140 (287)
T 2wei_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH  140 (287)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4678999999999988           66788999999999999999987643   58888888888877          


Q ss_pred             --------------CC-CC-----------------ccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------LA-DQ-----------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------~~-~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                    .. +.                 ........||..|+|||.+.+. ++.++          |++||.
T Consensus       141 ~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~  219 (287)
T 2wei_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGT  219 (287)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSS
T ss_pred             CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCC
Confidence                          00 00                 0001123478899999998654 77777          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+.......  .....    ...+.+++.+||+.+ ++|||+
T Consensus       220 ~p~~~~~------~~~-~~~~~~~~~~~~~~~--~~~~~----~~~~~~li~~~l~~dp~~Rps~  271 (287)
T 2wei_A          220 PPFYGKN------EYD-ILKRVETGKYAFDLP--QWRTI----SDDAKDLIRKMLTFHPSLRITA  271 (287)
T ss_dssp             CSSCCSS------HHH-HHHHHHHCCCCCCSG--GGTTS----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCC------HHH-HHHHHHcCCCCCCch--hhhhc----CHHHHHHHHHHcccChhhCcCH
Confidence            9987432      111 122222332211000  00112    234667888999999 999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.23  E-value=2.8e-11  Score=99.03  Aligned_cols=101  Identities=11%  Similarity=0.066  Sum_probs=77.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+.+.+|+.++..++                 ...+..++||||++ |+|.+++...... .+++.....++.++   
T Consensus       135 ~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~a  212 (429)
T 3kvw_A          135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQC  212 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHH
Confidence            33567889999998874                 45688999999996 7999999875433 58999888888877   


Q ss_pred             ---------------------CCCC---------------ccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ---------------------LADQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ---------------------~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                           ..+.               ........||+.|+|||++.+..++.++          |+
T Consensus       213 L~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  292 (429)
T 3kvw_A          213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAEL  292 (429)
T ss_dssp             HHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHH
Confidence                                 1110               0112345689999999999998899888          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      +||..||..
T Consensus       293 ltG~~pf~~  301 (429)
T 3kvw_A          293 LTGYPLLPG  301 (429)
T ss_dssp             HHSSCSSCC
T ss_pred             HhCCCCCCC
Confidence            999999874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=97.51  Aligned_cols=135  Identities=10%  Similarity=0.161  Sum_probs=80.1

Q ss_pred             CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------CC---------C-------------------
Q 048710           65 TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------LA---------D-------------------  108 (208)
Q Consensus        65 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------~~---------~-------------------  108 (208)
                      ....++||||+++|+|.+++...    ..+|.....++.++        ..         +                   
T Consensus        84 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           84 RMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             CEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             CceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence            44678999999999999999764    35788777777655        00         0                   


Q ss_pred             ------C---------------ccccccccCCcCccCcccccc-------CCCCcce----------eEecCCCCCCCCC
Q 048710          109 ------Q---------------TYMTTQVQGTFGYLDLQYFQS-------SPFTEKS----------NLLTKEKPICLTT  150 (208)
Q Consensus       109 ------~---------------~~~~~~~~gt~~y~aPE~~~~-------~~~~~ks----------E~~tg~~p~~~~~  150 (208)
                            .               ........||+.|+|||.+.+       ..++.++          |++||..|+....
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  239 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE  239 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence                  0               001123458999999999976       3444555          9999977764322


Q ss_pred             ccCCc--cH---------HHHHHHHHhcCcccccccccccccC--cHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          151 YEENK--SL---------TTYFLRAMKEDRLFEIFDGLVLKEG--GKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       151 ~~~~~--~l---------~~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .....  .+         .............    .+.+....  .......+.+++.+||+.+ ++|||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  306 (336)
T 3g2f_A          240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA  306 (336)
T ss_dssp             CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred             chhHHHHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcch
Confidence            11110  00         0111111111111    11121111  2345667888999999999 999986

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.22  E-value=3.4e-12  Score=100.71  Aligned_cols=97  Identities=14%  Similarity=0.210  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+.++.+++           .+.+..++||||++ |+|.+++....   .+++.....++.++           
T Consensus        77 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A           77 PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             ---CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457889999999998           67788999999998 59999998654   48888888888777           


Q ss_pred             --------------CC--C------------------CccccccccCCcCccCccccccC-CCCcce----------eEe
Q 048710          106 --------------LA--D------------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLL  140 (208)
Q Consensus       106 --------------~~--~------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~  140 (208)
                                    ..  +                  .........||..|+|||.+.+. .++.++          |++
T Consensus       153 ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  232 (329)
T 3gbz_A          153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML  232 (329)
T ss_dssp             CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence                          00  0                  00111234579999999999874 477777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||..||..
T Consensus       233 ~g~~pf~~  240 (329)
T 3gbz_A          233 MKTPLFPG  240 (329)
T ss_dssp             HSSCSSCC
T ss_pred             HCCCCcCC
Confidence            99999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.22  E-value=1.1e-11  Score=98.92  Aligned_cols=98  Identities=14%  Similarity=0.111  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           48 VNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      .+.|.+|+.++.+++                ......|+||||++ |+|.+++.....  .+++.....++.++      
T Consensus        73 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~  149 (362)
T 3pg1_A           73 CKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHV  149 (362)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHH
Confidence            478999999999988                12336899999998 799999886543  58899888888877      


Q ss_pred             ---------------------------CC------CCccccccccCCcCccCcccccc-CCCCcce----------eEec
Q 048710          106 ---------------------------LA------DQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------------------~~------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~t  141 (208)
                                                 +-      ..........||..|+|||.+.+ ..++.++          |++|
T Consensus       150 lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  229 (362)
T 3pg1_A          150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN  229 (362)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred             HHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh
Confidence                                       00      01111234568899999999876 6677777          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       230 g~~pf~~  236 (362)
T 3pg1_A          230 RKALFRG  236 (362)
T ss_dssp             SSCSCCC
T ss_pred             CCCCCCC
Confidence            9999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.21  E-value=3.1e-12  Score=101.34  Aligned_cols=133  Identities=13%  Similarity=0.146  Sum_probs=66.2

Q ss_pred             CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------------------CC-CC----------
Q 048710           65 TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------------------LA-DQ----------  109 (208)
Q Consensus        65 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------------------~~-~~----------  109 (208)
                      .+..++||||+++|+|.+++...... .+++.+...++.++                        .. +.          
T Consensus        98 ~~~~~lv~e~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A           98 KRCLLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             EEEEEEEEECCTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CceEEEEEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence            45589999999999999999875432 68999998888887                        10 00          


Q ss_pred             ------ccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCccccc
Q 048710          110 ------TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEI  173 (208)
Q Consensus       110 ------~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  173 (208)
                            ........||+.|+|||.+.+..++.++          |++||..||.......   ...........+..   
T Consensus       177 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~---  250 (336)
T 3fhr_A          177 FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA---ISPGMKRRIRLGQY---  250 (336)
T ss_dssp             TCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------
T ss_pred             cceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh---hhhhHHHhhhcccc---
Confidence                  0011244579999999999888888877          9999999997432111   10001111111100   


Q ss_pred             ccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          174 FDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       174 ~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         .............+.+++..||+.+ .+|||+
T Consensus       251 ---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  282 (336)
T 3fhr_A          251 ---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI  282 (336)
T ss_dssp             ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             ---ccCchhhccCCHHHHHHHHHHCCCChhHCcCH
Confidence               0000001122335667888999999 999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.20  E-value=3.4e-11  Score=96.23  Aligned_cols=159  Identities=13%  Similarity=0.120  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHhhcc----------------------c----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHH
Q 048710           47 KVNKLINEVVILSQIN----------------------L----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLH  100 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------------------~----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~  100 (208)
                      ....+.+|+.++.+++                      .    +....++||||+ +|+|.+++...... .+++.....
T Consensus        58 ~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~  135 (373)
T 1q8y_A           58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQ  135 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHH
T ss_pred             chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHH
Confidence            3456788888887763                      1    223789999999 99999999864433 588888887


Q ss_pred             HHHhC--------CC---------------------CC---------------ccccccccCCcCccCccccccCCCCcc
Q 048710          101 IVVDS--------LA---------------------DQ---------------TYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus       101 i~~~i--------~~---------------------~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                      ++.++        ..                     +.               ........||+.|+|||.+.+..++.+
T Consensus       136 i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  215 (373)
T 1q8y_A          136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCG  215 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTH
T ss_pred             HHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCch
Confidence            77766        00                     00               001124568999999999999888888


Q ss_pred             e----------eEecCCCCCCCCCccCCccHHHHHHHHHh-cCccccc--------------------c-c-------cc
Q 048710          137 S----------NLLTKEKPICLTTYEENKSLTTYFLRAMK-EDRLFEI--------------------F-D-------GL  177 (208)
Q Consensus       137 s----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~-~~~~~~~--------------------~-d-------~~  177 (208)
                      +          |++||+.||..............+..... -+.++..                    + .       ..
T Consensus       216 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (373)
T 1q8y_A          216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDV  295 (373)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhh
Confidence            8          99999999974332211111111111110 0111000                    0 0       00


Q ss_pred             c--cccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          178 V--LKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       178 l--~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +  ....+......+.+++..||+.+ ++|||+
T Consensus       296 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          296 LTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             hhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            0  01234566778889999999999 999986

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.20  E-value=3e-11  Score=93.51  Aligned_cols=99  Identities=15%  Similarity=0.228  Sum_probs=72.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .....+.+|+.++.+++           .+.+..++||||+++ +|.+++.....  .+++.....++.++         
T Consensus        43 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~  119 (292)
T 3o0g_A           43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHS  119 (292)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34578899999999998           677889999999985 56555554333  58888888888777         


Q ss_pred             ------------------------CC-------CCccccccccCCcCccCccccccCC-CCcce----------eEecCC
Q 048710          106 ------------------------LA-------DQTYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLTKE  143 (208)
Q Consensus       106 ------------------------~~-------~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~tg~  143 (208)
                                              +-       ..........||..|+|||.+.+.. ++.++          |++||.
T Consensus       120 ~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~  199 (292)
T 3o0g_A          120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG  199 (292)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcC
Confidence                                    00       0111123456899999999997765 67777          999998


Q ss_pred             CCCC
Q 048710          144 KPIC  147 (208)
Q Consensus       144 ~p~~  147 (208)
                      .|+.
T Consensus       200 ~p~~  203 (292)
T 3o0g_A          200 RPLF  203 (292)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            8864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.19  E-value=5.5e-12  Score=99.26  Aligned_cols=142  Identities=16%  Similarity=0.210  Sum_probs=76.6

Q ss_pred             hhHHHHHHHHHHHhhcc--------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           46 GKVNKLINEVVILSQIN--------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~--------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.|.+|+.++.++.                    ......++|+||+. |+|.+++........+++.....++.++
T Consensus        67 ~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi  145 (337)
T 3ll6_A           67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQT  145 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence            34567899999999885                    22344789999996 8999998753222258999988888776


Q ss_pred             --------CCC---------------------------Ccc-------------------ccccccCCcCccCcccc---
Q 048710          106 --------LAD---------------------------QTY-------------------MTTQVQGTFGYLDLQYF---  128 (208)
Q Consensus       106 --------~~~---------------------------~~~-------------------~~~~~~gt~~y~aPE~~---  128 (208)
                              ..+                           ...                   ......||+.|+|||.+   
T Consensus       146 ~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  225 (337)
T 3ll6_A          146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY  225 (337)
T ss_dssp             HHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CC
T ss_pred             HHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc
Confidence                    000                           000                   00133489999999998   


Q ss_pred             ccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhh
Q 048710          129 QSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCL  198 (208)
Q Consensus       129 ~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~  198 (208)
                      .+..++.++          |++||+.||......      .    .. .+....    ......    ...+.+++..||
T Consensus       226 ~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~----~~-~~~~~~----~~~~~~----~~~~~~li~~~l  286 (337)
T 3ll6_A          226 SNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL------R----IV-NGKYSI----PPHDTQ----YTVFHSLIRAML  286 (337)
T ss_dssp             TTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------CCC----CTTCCS----SGGGHHHHHHHS
T ss_pred             ccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH------H----hh-cCcccC----Cccccc----chHHHHHHHHHc
Confidence            466677777          999999998732110      0    01 111100    000111    123557788999


Q ss_pred             cCC-CCCCCC
Q 048710          199 NLN-EKKPTM  207 (208)
Q Consensus       199 ~~~-~~RPsm  207 (208)
                      +.+ .+|||+
T Consensus       287 ~~~p~~Rps~  296 (337)
T 3ll6_A          287 QVNPEERLSI  296 (337)
T ss_dssp             CSSGGGSCCH
T ss_pred             cCChhhCcCH
Confidence            999 999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.19  E-value=3.2e-11  Score=94.65  Aligned_cols=98  Identities=16%  Similarity=0.190  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHhhcc--------------c-----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN--------------L-----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~--------------~-----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.++..+.              .     ..+..++|+||++ |+|.+++...... .+++.....++.++    
T Consensus        56 ~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l  133 (326)
T 1blx_A           56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGL  133 (326)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHH
Confidence            35778888877762              1     5567899999998 7999999865433 58898888888877    


Q ss_pred             -----------------------------CC------CCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------------------LA------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                   +-      ..........||..|+|||.+.+..++.++          |++
T Consensus       134 ~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  213 (326)
T 1blx_A          134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  213 (326)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence                                         00      001112345689999999999988888888          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       214 ~g~~pf~~  221 (326)
T 1blx_A          214 RRKPLFRG  221 (326)
T ss_dssp             HSSCSCCC
T ss_pred             cCCCCCCC
Confidence            99999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.19  E-value=6.9e-11  Score=95.06  Aligned_cols=160  Identities=16%  Similarity=0.163  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-----------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIV  102 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~  102 (208)
                      .....+.+|+.++.+++                       .+....++||||+ +|+|.+++...... .+++.....++
T Consensus        75 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~-~~~~~~~~~i~  152 (397)
T 1wak_A           75 HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQ-GLPLPCVKKII  152 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTS-CCCHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccC-CCCHHHHHHHH
Confidence            34567899999999874                       1556799999999 66777776554322 58888888887


Q ss_pred             HhC-------------------------CCCC------------------------------------------------
Q 048710          103 VDS-------------------------LADQ------------------------------------------------  109 (208)
Q Consensus       103 ~~i-------------------------~~~~------------------------------------------------  109 (208)
                      .++                         ..+.                                                
T Consensus       153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (397)
T 1wak_A          153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEK  232 (397)
T ss_dssp             HHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGG
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccc
Confidence            777                         1000                                                


Q ss_pred             -c-------------cccccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHH
Q 048710          110 -T-------------YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAM  165 (208)
Q Consensus       110 -~-------------~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~  165 (208)
                       .             .......||..|+|||.+.+..++.++          |++||+.||..............+....
T Consensus       233 ~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~  312 (397)
T 1wak_A          233 LKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII  312 (397)
T ss_dssp             CCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHH
T ss_pred             cceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHH
Confidence             0             001234589999999999998899888          9999999997543332221111111111


Q ss_pred             h-cCccc-----------cccccc-----------------c--cccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          166 K-EDRLF-----------EIFDGL-----------------V--LKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       166 ~-~~~~~-----------~~~d~~-----------------l--~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      . .+..+           ..++..                 +  ....+.+....+.+++.+||+.+ .+|||+
T Consensus       313 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  386 (397)
T 1wak_A          313 ELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATA  386 (397)
T ss_dssp             HHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCH
T ss_pred             HhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCH
Confidence            0 01110           000000                 0  01234566778889999999999 999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.19  E-value=1e-10  Score=96.67  Aligned_cols=99  Identities=16%  Similarity=0.172  Sum_probs=70.9

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-
Q 048710           44 YEGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-  105 (208)
                      .....+.+.+|+.+|..++                 .+.+..||||||++++ |.+.+..     .+++.....++.++ 
T Consensus       101 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil  174 (464)
T 3ttj_A          101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQML  174 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHH
Confidence            3445678999999999988                 1225679999999865 6666653     37788777777766 


Q ss_pred             --------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                            ..+.........||..|+|||.+.+..++.++          
T Consensus       175 ~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  254 (464)
T 3ttj_A          175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG  254 (464)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHH
Confidence                                                  00011123456789999999999999999888          


Q ss_pred             eEecCCCCCCC
Q 048710          138 NLLTKEKPICL  148 (208)
Q Consensus       138 E~~tg~~p~~~  148 (208)
                      |+++|+.||..
T Consensus       255 ell~g~~pF~g  265 (464)
T 3ttj_A          255 EMVRHKILFPG  265 (464)
T ss_dssp             HHHHSSCSSCC
T ss_pred             HHHhCCCCCCC
Confidence            99999999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.18  E-value=2.8e-12  Score=102.79  Aligned_cols=131  Identities=14%  Similarity=0.033  Sum_probs=77.1

Q ss_pred             CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHH------HHHHHhC------------------------CCC-------
Q 048710           66 EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQ------LHIVVDS------------------------LAD-------  108 (208)
Q Consensus        66 ~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r------~~i~~~i------------------------~~~-------  108 (208)
                      +..||||||++ |+|.+++.....  .+.+..+      ..++.++                        ..+       
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D  237 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD  237 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEe
Confidence            44799999999 999999986432  2344444      4444444                        000       


Q ss_pred             --C----ccccccccCCcCccCcccccc--CCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcc
Q 048710          109 --Q----TYMTTQVQGTFGYLDLQYFQS--SPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRL  170 (208)
Q Consensus       109 --~----~~~~~~~~gt~~y~aPE~~~~--~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~  170 (208)
                        .    ........||+.|+|||.+.+  ..++.++          |++||+.||..........        ......
T Consensus       238 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--------~~~~~~  309 (371)
T 3q60_A          238 VSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--------WKRPSL  309 (371)
T ss_dssp             GGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC--------CCBCCT
T ss_pred             cceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc--------hhhhhh
Confidence              0    001114567899999999987  6788888          9999999998542211100        000000


Q ss_pred             cccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          171 FEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       171 ~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ...................+.+++.+||+.+ ++|||+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  347 (371)
T 3q60_A          310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP  347 (371)
T ss_dssp             TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred             hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence            0001111111111122345667888999999 999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.17  E-value=2.4e-11  Score=95.61  Aligned_cols=97  Identities=11%  Similarity=0.086  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHHHHhhcc------------c--CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           46 GKVNKLINEVVILSQIN------------L--ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~--~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      ...+.+.+|+.++.+++            .  .....++||||+++|+|.+++..      +++.....++.++      
T Consensus        72 ~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~  145 (330)
T 3nsz_A           72 VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDY  145 (330)
T ss_dssp             CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHH
Confidence            34578999999999986            2  26678999999999999999863      6777777777766      


Q ss_pred             ------------------C-CC---------------CccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ------------------L-AD---------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ------------------~-~~---------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                        . .+               .........||..|+|||.+.+ ..++.++          |++
T Consensus       146 lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll  225 (330)
T 3nsz_A          146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI  225 (330)
T ss_dssp             HHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHH
Confidence                              0 00               0111234468899999999876 6677777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       226 ~g~~p~~~  233 (330)
T 3nsz_A          226 FRKEPFFH  233 (330)
T ss_dssp             HTCSSSSC
T ss_pred             hCCCCccc
Confidence            99999863

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.17  E-value=2.9e-12  Score=103.03  Aligned_cols=117  Identities=11%  Similarity=0.009  Sum_probs=74.8

Q ss_pred             EEEEEeeCCCCChhhHhhcCCC----CCCCCHHHHHHHHHhC------------------------CCC-----------
Q 048710           68 LLLVYEFISNGTVYQYINNQNE----EFPIAWEMQLHIVVDS------------------------LAD-----------  108 (208)
Q Consensus        68 ~~lv~ey~~~GsL~~~l~~~~~----~~~l~~~~r~~i~~~i------------------------~~~-----------  108 (208)
                      .|+||||+ +|+|.+++.....    ...++|..+..|+.++                        ..+           
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence            88999999 6999999985321    1134567887787777                        000           


Q ss_pred             --CccccccccCCcCccCccccccC-----------CCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHH
Q 048710          109 --QTYMTTQVQGTFGYLDLQYFQSS-----------PFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAM  165 (208)
Q Consensus       109 --~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~  165 (208)
                        .........| +.|+|||.+.+.           .++.++          |++||+.||.......            
T Consensus       254 ~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~------------  320 (377)
T 3byv_A          254 VRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG------------  320 (377)
T ss_dssp             EETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C------------
T ss_pred             eecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc------------
Confidence              1111234567 999999999887           788888          9999999987322111            


Q ss_pred             hcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          166 KEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       166 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         ....+.. .. ...+    ..+.+++..||+.+ .+|||+
T Consensus       321 ---~~~~~~~-~~-~~~~----~~~~~li~~~L~~dp~~Rpt~  354 (377)
T 3byv_A          321 ---GSEWIFR-SC-KNIP----QPVRALLEGFLRYPKEDRLLP  354 (377)
T ss_dssp             ---CSGGGGS-SC-CCCC----HHHHHHHHHHTCSSGGGCCCH
T ss_pred             ---chhhhhh-hc-cCCC----HHHHHHHHHHcCCCchhCCCH
Confidence               0111111 00 1222    34667888999999 999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.16  E-value=3.4e-11  Score=95.62  Aligned_cols=97  Identities=11%  Similarity=0.080  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      +.+.+|+.++.+++           .+.+..++||||+++ +|.+++.....  .+++.....++.++            
T Consensus        57 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i  133 (346)
T 1ua2_A           57 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWI  133 (346)
T ss_dssp             THHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            46889999999988           567889999999995 89999876543  47777777777666            


Q ss_pred             ---------------------C-------CCCccccccccCCcCccCccccccC-CCCcce----------eEecCCCCC
Q 048710          106 ---------------------L-------ADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ---------------------~-------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~  146 (208)
                                           +       ...........||+.|+|||.+.+. .++.++          |+++|..|+
T Consensus       134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~  213 (346)
T 1ua2_A          134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  213 (346)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence                                 0       0011112345689999999998754 467776          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       214 ~~  215 (346)
T 1ua2_A          214 PG  215 (346)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.15  E-value=3.7e-11  Score=93.03  Aligned_cols=146  Identities=18%  Similarity=0.284  Sum_probs=88.3

Q ss_pred             hhhHHHHHHHHHHHhhcc------------c------------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHH
Q 048710           45 EGKVNKLINEVVILSQIN------------L------------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLH  100 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~------------~------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~  100 (208)
                      ....+.|.+|+.++.+++            .            ..+..++|+||+++|+|.+++.....  .+++.....
T Consensus        43 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~  120 (303)
T 1zy4_A           43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL--NQQRDEYWR  120 (303)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCG--GGCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcccc--ccchHHHHH
Confidence            344578999999999988            0            14678999999999999999986443  477777777


Q ss_pred             HHHhC---------------------------------CCCC---------------------ccccccccCCcCccCcc
Q 048710          101 IVVDS---------------------------------LADQ---------------------TYMTTQVQGTFGYLDLQ  126 (208)
Q Consensus       101 i~~~i---------------------------------~~~~---------------------~~~~~~~~gt~~y~aPE  126 (208)
                      ++.++                                 +-+.                     ........||..|+|||
T Consensus       121 i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (303)
T 1zy4_A          121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE  200 (303)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHH
T ss_pred             HHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence            77766                                 0000                     01112445899999999


Q ss_pred             ccccC-CCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHH
Q 048710          127 YFQSS-PFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKK  195 (208)
Q Consensus       127 ~~~~~-~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~  195 (208)
                      .+.+. .++.++          |++|   |+...     ..... .........      ..+....+......+.+++.
T Consensus       201 ~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~li~  265 (303)
T 1zy4_A          201 VLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----MERVN-ILKKLRSVS------IEFPPDFDDNKMKVEKKIIR  265 (303)
T ss_dssp             HHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHHHH-HHHHHHSTT------CCCCTTCCTTTSHHHHHHHH
T ss_pred             cccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----hhHHH-HHHhccccc------cccCccccccchHHHHHHHH
Confidence            98754 677777          8887   44311     01111 111221111      11112222233345667888


Q ss_pred             HhhcCC-CCCCCC
Q 048710          196 RCLNLN-EKKPTM  207 (208)
Q Consensus       196 ~C~~~~-~~RPsm  207 (208)
                      +||+.+ ++|||+
T Consensus       266 ~~l~~dp~~Rps~  278 (303)
T 1zy4_A          266 LLIDHDPNKRPGA  278 (303)
T ss_dssp             HHTCSSGGGSCCH
T ss_pred             HHHhcCcccCcCH
Confidence            999999 999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.15  E-value=2.4e-10  Score=91.26  Aligned_cols=99  Identities=12%  Similarity=0.131  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           46 GKVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ...+.|.+|++++.+++                ......|+|+||++ |+|.+++...    .+++.....++.++    
T Consensus        67 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL  141 (364)
T 3qyz_A           67 TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGL  141 (364)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHH
Confidence            34578999999999988                11246899999998 6999999764    48888888888777    


Q ss_pred             -----------------------------CCCC----------ccccccccCCcCccCcccccc-CCCCcce--------
Q 048710          106 -----------------------------LADQ----------TYMTTQVQGTFGYLDLQYFQS-SPFTEKS--------  137 (208)
Q Consensus       106 -----------------------------~~~~----------~~~~~~~~gt~~y~aPE~~~~-~~~~~ks--------  137 (208)
                                                   +-+.          ........||+.|+|||.+.+ ..++.++        
T Consensus       142 ~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHH
T ss_pred             HHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHH
Confidence                                         0000          001234478999999998754 4477777        


Q ss_pred             --eEecCCCCCCCC
Q 048710          138 --NLLTKEKPICLT  149 (208)
Q Consensus       138 --E~~tg~~p~~~~  149 (208)
                        |++||+.||...
T Consensus       222 l~ell~g~~pf~~~  235 (364)
T 3qyz_A          222 LAEMLSNRPIFPGK  235 (364)
T ss_dssp             HHHHHHSSCSSCCS
T ss_pred             HHHHHHCCCCCCCC
Confidence              999999999743

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.14  E-value=1.2e-10  Score=93.27  Aligned_cols=97  Identities=14%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cC------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------LE------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+.+|+.++..++           ..      ....|+||||++ |+|.+++..     .+++.....++.++   
T Consensus        66 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~a  139 (371)
T 2xrw_A           66 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCG  139 (371)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHH
Confidence            44567899999999988           11      237899999998 578888863     47788877777776   


Q ss_pred             ---------------------C---------------CCCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 ---------------------L---------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 ---------------------~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                           .               .+.........||..|+|||.+.+..++.++          |+
T Consensus       140 l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  219 (371)
T 2xrw_A          140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  219 (371)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence                                 0               0011112345789999999999998888888          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      +||+.||..
T Consensus       220 ~~g~~pf~~  228 (371)
T 2xrw_A          220 IKGGVLFPG  228 (371)
T ss_dssp             HHSSCSSCC
T ss_pred             HhCCCCCCC
Confidence            999999974

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=1.4e-10  Score=93.00  Aligned_cols=98  Identities=12%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cC------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------LE------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+.+.+|++++.+++           ..      ....|+||||+ +++|.+++...    .+++.....++.++   
T Consensus        66 ~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~  140 (367)
T 1cm8_A           66 LFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKG  140 (367)
T ss_dssp             HHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHH
Confidence            34567899999999987           11      24569999999 89999999863    47888777777766   


Q ss_pred             ---------------------CCC---------C----ccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ---------------------LAD---------Q----TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------------~~~---------~----~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                           ..+         .    ........||..|+|||.+.+ ..++.++          |++
T Consensus       141 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  220 (367)
T 1cm8_A          141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI  220 (367)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHH
Confidence                                 000         0    111234578999999999877 6778777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       221 ~g~~pf~~  228 (367)
T 1cm8_A          221 TGKTLFKG  228 (367)
T ss_dssp             HSSCSSCC
T ss_pred             hCCCCCCC
Confidence            99999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.13  E-value=3.1e-11  Score=95.92  Aligned_cols=98  Identities=12%  Similarity=0.068  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cC--------CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           48 VNKLINEVVILSQIN-----------LE--------TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~--------~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+.+|+.++.+++           ..        .+..++||||++ |+|.+.+.....  .+++.....++.++   
T Consensus        60 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~~  136 (351)
T 3mi9_A           60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLV--KFTLSEIKRVMQMLLNG  136 (351)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhccC--CCCHHHHHHHHHHHHHH
Confidence            457889999999988           11        567899999998 588888876543  58899888888877   


Q ss_pred             ------------------------------CC-----------CCccccccccCCcCccCcccccc-CCCCcce------
Q 048710          106 ------------------------------LA-----------DQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS------  137 (208)
Q Consensus       106 ------------------------------~~-----------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks------  137 (208)
                                                    +-           ..........||+.|+|||.+.+ ..++.++      
T Consensus       137 l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG  216 (351)
T 3mi9_A          137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  216 (351)
T ss_dssp             HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHH
T ss_pred             HHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHH
Confidence                                          00           01111234567999999999876 4567777      


Q ss_pred             ----eEecCCCCCCC
Q 048710          138 ----NLLTKEKPICL  148 (208)
Q Consensus       138 ----E~~tg~~p~~~  148 (208)
                          |++||..||..
T Consensus       217 ~il~ell~g~~pf~~  231 (351)
T 3mi9_A          217 CIMAEMWTRSPIMQG  231 (351)
T ss_dssp             HHHHHHHHSSCSCCC
T ss_pred             HHHHHHHhCCCCCCC
Confidence                99999999874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.11  E-value=3.4e-12  Score=100.53  Aligned_cols=96  Identities=16%  Similarity=0.176  Sum_probs=69.2

Q ss_pred             HHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------
Q 048710           50 KLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------  105 (208)
                      .+.+|+.++.+++           .+.+..++||||++ |+|.+++.....  .+++.....++.++             
T Consensus        46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~iv  122 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVL  122 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            4568999999988           67788999999998 699999987544  58888887777776             


Q ss_pred             -----------CCC----------------CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCC
Q 048710          106 -----------LAD----------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPIC  147 (208)
Q Consensus       106 -----------~~~----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~  147 (208)
                                 ..+                .........||..|+|||.+.+ ..++.++          |++||+.||.
T Consensus       123 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  202 (324)
T 3mtl_A          123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP  202 (324)
T ss_dssp             ESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                       000                0111223467999999999876 5677777          9999999997


Q ss_pred             C
Q 048710          148 L  148 (208)
Q Consensus       148 ~  148 (208)
                      .
T Consensus       203 ~  203 (324)
T 3mtl_A          203 G  203 (324)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.11  E-value=2e-10  Score=92.13  Aligned_cols=97  Identities=14%  Similarity=0.094  Sum_probs=71.0

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCe------EEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEV------LLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~------~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+.+|+.++.+++           ...+.      .++||||+. |+|.+++..     .+++.....++.++   
T Consensus        83 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~a  156 (371)
T 4exu_A           83 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKG  156 (371)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHH
Confidence            34578999999999988           22232      399999998 789888853     48888888888777   


Q ss_pred             ---------------------CCC-------------CccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ---------------------LAD-------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                           ..+             .........||..|+|||.+.+ ..++.++          |++
T Consensus       157 L~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  236 (371)
T 4exu_A          157 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML  236 (371)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHH
Confidence                                 000             0111234568999999999877 6778777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       237 ~g~~pf~~  244 (371)
T 4exu_A          237 TGKTLFKG  244 (371)
T ss_dssp             HSSCSCCC
T ss_pred             hCCCCCCC
Confidence            99999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.09  E-value=1.7e-10  Score=88.90  Aligned_cols=130  Identities=14%  Similarity=0.153  Sum_probs=78.5

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC-------------------------CC---------
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS-------------------------LA---------  107 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i-------------------------~~---------  107 (208)
                      .+.+..++||||++ |+|.+++... .....+++.....++.++                         ..         
T Consensus        76 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Df  154 (290)
T 3fme_A           76 FREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF  154 (290)
T ss_dssp             ECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred             eccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeec
Confidence            66778999999998 6998887641 111268898888888776                         00         


Q ss_pred             ------CCccccccccCCcCccCcccc----ccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhc
Q 048710          108 ------DQTYMTTQVQGTFGYLDLQYF----QSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKE  167 (208)
Q Consensus       108 ------~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~  167 (208)
                            ..........||+.|+|||.+    .+..++.++          |++||+.||....     .....+......
T Consensus       155 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~  229 (290)
T 3fme_A          155 GISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEE  229 (290)
T ss_dssp             ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHS
T ss_pred             CCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----chHHHHHHHhcc
Confidence                  001111234689999999996    456677777          9999999987321     111222222222


Q ss_pred             CcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          168 DRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       168 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      . ......        ......+.+++.+||+.+ .+|||+
T Consensus       230 ~-~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~  261 (290)
T 3fme_A          230 P-SPQLPA--------DKFSAEFVDFTSQCLKKNSKERPTY  261 (290)
T ss_dssp             C-CCCCCT--------TTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             C-CCCccc--------ccCCHHHHHHHHHHhhcChhhCcCH
Confidence            2 111111        112234667888999999 999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.07  E-value=1.3e-10  Score=95.23  Aligned_cols=148  Identities=11%  Similarity=0.091  Sum_probs=85.7

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCC-CC---CHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNEEF-PI---AWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~-~l---~~~~r~~i~~~i-----  105 (208)
                      ..+.+.+|+.++.++ +           .+.+..|+||||++ |+|.+++....... ..   .+.....++.++     
T Consensus        51 ~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  129 (434)
T 2rio_A           51 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA  129 (434)
T ss_dssp             GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHH
Confidence            345688999999876 3           66788999999995 79999998653210 11   222223344444     


Q ss_pred             -------------------CCC----------------------Ccc-----------ccccccCCcCccCcccccc---
Q 048710          106 -------------------LAD----------------------QTY-----------MTTQVQGTFGYLDLQYFQS---  130 (208)
Q Consensus       106 -------------------~~~----------------------~~~-----------~~~~~~gt~~y~aPE~~~~---  130 (208)
                                         ..+                      .+.           ......||++|+|||++.+   
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  209 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN  209 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCT
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccc
Confidence                               000                      000           0113468999999999975   


Q ss_pred             ----CCCCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHH
Q 048710          131 ----SPFTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKK  195 (208)
Q Consensus       131 ----~~~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~  195 (208)
                          ..++.++          |++| |..||.....    ..    . ....+...   .+.+....+......+.+++.
T Consensus       210 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----~~----~-~i~~~~~~---~~~~~~~~~~~~~~~~~~li~  277 (434)
T 2rio_A          210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS----RE----S-NIIRGIFS---LDEMKCLHDRSLIAEATDLIS  277 (434)
T ss_dssp             TSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT----HH----H-HHHHTCCC---CCCCTTCCCHHHHHHHHHHHH
T ss_pred             cccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh----hH----H-HHhcCCCC---cccccccccccchHHHHHHHH
Confidence                5667776          9999 9999873211    01    1 11111110   011111123455567788999


Q ss_pred             HhhcCC-CCCCCC
Q 048710          196 RCLNLN-EKKPTM  207 (208)
Q Consensus       196 ~C~~~~-~~RPsm  207 (208)
                      +||+.+ .+|||+
T Consensus       278 ~~L~~dP~~Rps~  290 (434)
T 2rio_A          278 QMIDHDPLKRPTA  290 (434)
T ss_dssp             HHTCSSGGGSCCH
T ss_pred             HHhhCChhhCCCH
Confidence            999999 999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.07  E-value=1.2e-10  Score=91.50  Aligned_cols=150  Identities=11%  Similarity=0.140  Sum_probs=74.0

Q ss_pred             hhHHHHHHHHH-HHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcC--CCCCCCCHHHHHHHHHhC------
Q 048710           46 GKVNKLINEVV-ILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQ--NEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        46 ~~~~~f~~E~~-~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~--~~~~~l~~~~r~~i~~~i------  105 (208)
                      ....++..|+. ++..++           ...+..++||||+++ +|.+++...  .....+++.....++.++      
T Consensus        62 ~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~  140 (327)
T 3aln_A           62 KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH  140 (327)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHH
Confidence            33456677776 555555           667889999999985 888877631  111257888877777665      


Q ss_pred             ----------------------------CCC------CccccccccCCcCccCcccc----ccCCCCcce----------
Q 048710          106 ----------------------------LAD------QTYMTTQVQGTFGYLDLQYF----QSSPFTEKS----------  137 (208)
Q Consensus       106 ----------------------------~~~------~~~~~~~~~gt~~y~aPE~~----~~~~~~~ks----------  137 (208)
                                                  +-+      .........||..|+|||.+    .+..++.++          
T Consensus       141 lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  220 (327)
T 3aln_A          141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY  220 (327)
T ss_dssp             HHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHH
T ss_pred             HhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence                                        000      00111233689999999998    456677777          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||.....     ....+.. ...+.     .+.+...........+.+++..||+.+ ++|||+
T Consensus       221 ~l~~g~~pf~~~~~-----~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  280 (327)
T 3aln_A          221 ELATGRFPYPKWNS-----VFDQLTQ-VVKGD-----PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY  280 (327)
T ss_dssp             HHHHSCCCSSCC------------CC-CCCSC-----CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHCCCCCCCcch-----HHHHHHH-HhcCC-----CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence            99999999874211     0000000 00111     111111111122345677888999999 999996

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.07  E-value=1.5e-10  Score=90.29  Aligned_cols=100  Identities=16%  Similarity=0.189  Sum_probs=73.0

Q ss_pred             hhhHHHHHHHHHHHhhcc----------c---------------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHH
Q 048710           45 EGKVNKLINEVVILSQIN----------L---------------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQL   99 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~----------~---------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~   99 (208)
                      ....+.|.+|++++.+++          .               +.+..++||||++ |+|.+++.+.    .+++....
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~  123 (320)
T 2i6l_A           49 PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHAR  123 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHH
Confidence            345678999999999987          0               2367899999998 7999999753    47888887


Q ss_pred             HHHHhC------------------------C-CC---------C----------ccccccccCCcCccCcccccc-CCCC
Q 048710          100 HIVVDS------------------------L-AD---------Q----------TYMTTQVQGTFGYLDLQYFQS-SPFT  134 (208)
Q Consensus       100 ~i~~~i------------------------~-~~---------~----------~~~~~~~~gt~~y~aPE~~~~-~~~~  134 (208)
                      .++.++                        . .+         .          ........||..|+|||.+.+ ..++
T Consensus       124 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (320)
T 2i6l_A          124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYT  203 (320)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCC
Confidence            777776                        0 00         0          001123346889999998865 6677


Q ss_pred             cce----------eEecCCCCCCCC
Q 048710          135 EKS----------NLLTKEKPICLT  149 (208)
Q Consensus       135 ~ks----------E~~tg~~p~~~~  149 (208)
                      .++          |++||+.||...
T Consensus       204 ~~~Di~slG~il~el~~g~~pf~~~  228 (320)
T 2i6l_A          204 KAIDMWAAGCIFAEMLTGKTLFAGA  228 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             chhhhHhHHHHHHHHHhCCCCCCCC
Confidence            777          999999999743

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.07  E-value=5.3e-10  Score=90.03  Aligned_cols=99  Identities=12%  Similarity=0.128  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHHHHhhcc--------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           45 EGKVNKLINEVVILSQIN--------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~--------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ......+.+|+.++.+++              .+....|+||||++ |+|.+++...    .+++..+..++.++     
T Consensus        49 ~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~  123 (388)
T 3oz6_A           49 STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIK  123 (388)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHH
Confidence            344567889999999886              23447899999998 7999999863    47787777666666     


Q ss_pred             ----------------------------CCCC----------------------------ccccccccCCcCccCccccc
Q 048710          106 ----------------------------LADQ----------------------------TYMTTQVQGTFGYLDLQYFQ  129 (208)
Q Consensus       106 ----------------------------~~~~----------------------------~~~~~~~~gt~~y~aPE~~~  129 (208)
                                                  +-+.                            ....+...||..|+|||.+.
T Consensus       124 ~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (388)
T 3oz6_A          124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL  203 (388)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT
T ss_pred             HHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc
Confidence                                        0000                            01123457999999999997


Q ss_pred             c-CCCCcce----------eEecCCCCCCC
Q 048710          130 S-SPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       130 ~-~~~~~ks----------E~~tg~~p~~~  148 (208)
                      + ..++.++          |++||+.||..
T Consensus       204 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          204 GSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            6 5677777          99999999974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.06  E-value=5.7e-11  Score=102.51  Aligned_cols=132  Identities=13%  Similarity=0.133  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCC-----eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           46 GKVNKLINEVVILSQIN-----------LETE-----VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~-----~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      .....|.+|++++.+++           ...+     ..||||||+++|+|.+++..     .++|.++..++.++    
T Consensus       121 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL  195 (681)
T 2pzi_A          121 EAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPAL  195 (681)
T ss_dssp             HHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHH
Confidence            44567999999999988           1112     26999999999999998764     48999999998888    


Q ss_pred             --------------------CCC--------Cc---cccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------------LAD--------QT---YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------------~~~--------~~---~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                          ..+        ..   .......||++|+|||.+.++. +.++          |+++|..
T Consensus       196 ~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~  274 (681)
T 2pzi_A          196 SYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLP  274 (681)
T ss_dssp             HHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCC
Confidence                                000        00   0113456999999999987654 6666          8888887


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCc-HHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGG-KDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.....                ..+        ....+ ......+.+++.+||+.+ ++||+.
T Consensus       275 ~~~~~~~----------------~~~--------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~  315 (681)
T 2pzi_A          275 TRNGRYV----------------DGL--------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTT  315 (681)
T ss_dssp             EETTEEC----------------SSC--------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSS
T ss_pred             CCccccc----------------ccc--------cccccccccCHHHHHHHhhhccCChhhCCCH
Confidence            7652110                000        00111 122345678888999999 999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.05  E-value=1.4e-10  Score=92.06  Aligned_cols=97  Identities=9%  Similarity=0.074  Sum_probs=72.0

Q ss_pred             hHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           47 KVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ....+.+|+.++.+++                ...+..++|+||++ |+|.+++...    .+++.....++.++     
T Consensus        52 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~  126 (353)
T 2b9h_A           52 FALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVK  126 (353)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHH
Confidence            4567899999999988                12367899999998 7999999763    58888888888777     


Q ss_pred             ----------------------------CCCCcc-----------------ccccccCCcCccCcccccc-CCCCcce--
Q 048710          106 ----------------------------LADQTY-----------------MTTQVQGTFGYLDLQYFQS-SPFTEKS--  137 (208)
Q Consensus       106 ----------------------------~~~~~~-----------------~~~~~~gt~~y~aPE~~~~-~~~~~ks--  137 (208)
                                                  +-+...                 ......||..|+|||.+.+ ..++.++  
T Consensus       127 ~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  206 (353)
T 2b9h_A          127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV  206 (353)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred             HHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhH
Confidence                                        000000                 0123468999999998764 6677777  


Q ss_pred             --------eEecCCCCCCC
Q 048710          138 --------NLLTKEKPICL  148 (208)
Q Consensus       138 --------E~~tg~~p~~~  148 (208)
                              |+++|+.||..
T Consensus       207 ~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          207 WSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             HHHHHHHHHHHHSSCSCCC
T ss_pred             HHHHHHHHHHHhCCCCCCC
Confidence                    99999999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.05  E-value=2.4e-11  Score=95.52  Aligned_cols=133  Identities=15%  Similarity=0.291  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCC-CChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           49 NKLINEVVILSQIN-------------LETEVLLLVYEFISN-GTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~-GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..|.+|+.++.+++             ...+..++|+||+.+ |+|.+++....   .+++.....++.++         
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~  167 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHN  167 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence            45778999998875             567889999999987 99999998643   57888888877777         


Q ss_pred             ---------------C-CCC--------------ccccccccCCcCccCccccccCCC-Ccce----------eEecCCC
Q 048710          106 ---------------L-ADQ--------------TYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEK  144 (208)
Q Consensus       106 ---------------~-~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~  144 (208)
                                     . .+.              ........||..|+|||.+.+..+ +.++          |++||+.
T Consensus       168 ~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence                           0 100              011224568999999999987665 4554          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....             ....+..  ..    ....+    ..+.+++.+||+.+ ++|||+
T Consensus       248 pf~~~~-------------~~~~~~~--~~----~~~~~----~~~~~li~~~l~~dp~~Rps~  288 (320)
T 3a99_A          248 PFEHDE-------------EIIRGQV--FF----RQRVS----SECQHLIRWCLALRPSDRPTF  288 (320)
T ss_dssp             SCCSHH-------------HHHHCCC--CC----SSCCC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCChh-------------hhhcccc--cc----cccCC----HHHHHHHHHHccCChhhCcCH
Confidence            987310             1111111  01    11222    34567888999999 999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.04  E-value=2.2e-10  Score=93.76  Aligned_cols=142  Identities=13%  Similarity=0.187  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.+|+.+|.++.            .+.+..|+||||++ |+|.+++......  +.+.....++.++           
T Consensus        62 ~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHHHCc
Confidence            34678999999883            66788999999997 6999999875432  2222223333333           


Q ss_pred             -------------CC-C--Cc---------------------cccccccCCcCccCccccc---cCCCCcce--------
Q 048710          106 -------------LA-D--QT---------------------YMTTQVQGTFGYLDLQYFQ---SSPFTEKS--------  137 (208)
Q Consensus       106 -------------~~-~--~~---------------------~~~~~~~gt~~y~aPE~~~---~~~~~~ks--------  137 (208)
                                   .. +  ..                     .......||++|+|||.+.   +..++.++        
T Consensus       139 ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i  218 (432)
T 3p23_A          139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV  218 (432)
T ss_dssp             CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred             CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence                         00 0  00                     1112356899999999997   35556566        


Q ss_pred             --eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++| |..||.....       ............ ....+      +......+.+++.+||+.+ .+|||+
T Consensus       219 l~ellt~g~~pf~~~~~-------~~~~~~~~~~~~-~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~  278 (432)
T 3p23_A          219 FYYVISEGSHPFGKSLQ-------RQANILLGACSL-DCLHP------EKHEDVIARELIEKMIAMDPQKRPSA  278 (432)
T ss_dssp             HHHHHTTSCBTTBSTTT-------HHHHHHTTCCCC-TTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHHcCCCCCcchhhH-------HHHHHHhccCCc-cccCc------cccccHHHHHHHHHHHhCCHhhCCCH
Confidence              9999 8999863211       111111111111 11111      1123334567888999999 999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.03  E-value=5.9e-10  Score=88.60  Aligned_cols=97  Identities=14%  Similarity=0.079  Sum_probs=69.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCC------eEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------LETE------VLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~------~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....|.+|+.++.+++           ...+      ..|+||||++ |+|.+++..     .+++.....++.++   
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~a  138 (353)
T 3coi_A           65 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKG  138 (353)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHH
Confidence            34568999999999988           2222      3599999998 799988853     47888888888777   


Q ss_pred             ---------------------CCC---------C----ccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ---------------------LAD---------Q----TYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------------~~~---------~----~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                           ..+         .    ........||..|+|||.+.+ ..++.++          |++
T Consensus       139 l~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~  218 (353)
T 3coi_A          139 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML  218 (353)
T ss_dssp             HHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHH
Confidence                                 000         0    011234568999999999876 6677777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       219 ~g~~pf~~  226 (353)
T 3coi_A          219 TGKTLFKG  226 (353)
T ss_dssp             HSSCSSBS
T ss_pred             hCCCCCCC
Confidence            99999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.03  E-value=5.4e-10  Score=89.54  Aligned_cols=98  Identities=13%  Similarity=0.109  Sum_probs=66.9

Q ss_pred             hhHHHHHHHHHHHhhcc-----------c------CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           46 GKVNKLINEVVILSQIN-----------L------ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .....+.+|++++.+++           .      ..+..|+|+||+ +++|.+++...    .+++.....++.++   
T Consensus        70 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~a  144 (367)
T 2fst_X           70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRG  144 (367)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHH
Confidence            34568899999999987           1      235689999999 79999999752    58888888887777   


Q ss_pred             ---------------------CCC-------------CccccccccCCcCccCcccccc-CCCCcce----------eEe
Q 048710          106 ---------------------LAD-------------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLL  140 (208)
Q Consensus       106 ---------------------~~~-------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~  140 (208)
                                           ..+             .........||..|+|||.+.+ ..++.++          |++
T Consensus       145 L~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  224 (367)
T 2fst_X          145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL  224 (367)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHH
Confidence                                 000             0111234578999999999876 6777777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       225 ~g~~pf~~  232 (367)
T 2fst_X          225 TGRTLFPG  232 (367)
T ss_dssp             HSSCSCCC
T ss_pred             hCCCCCCC
Confidence            99999974

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.00  E-value=6.6e-11  Score=92.41  Aligned_cols=133  Identities=17%  Similarity=0.224  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHhhc----c-----------cCCCeEEEEEee-CCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           49 NKLINEVVILSQI----N-----------LETEVLLLVYEF-ISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l----~-----------~~~~~~~lv~ey-~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ..+.+|+.++.++    +           ...+..++|+|| +++|+|.+++.+..   .+++.....++.++       
T Consensus        79 ~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~l  155 (312)
T 2iwi_A           79 VTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHC  155 (312)
T ss_dssp             CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Confidence            3567899999887    3           566788999999 89999999998643   58899888888877       


Q ss_pred             -----------------C-CCC--------------ccccccccCCcCccCccccccCCCCc-ce----------eEecC
Q 048710          106 -----------------L-ADQ--------------TYMTTQVQGTFGYLDLQYFQSSPFTE-KS----------NLLTK  142 (208)
Q Consensus       106 -----------------~-~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~-ks----------E~~tg  142 (208)
                                       . .+.              ........||..|+|||.+.+..+.. ++          |++||
T Consensus       156 H~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             HHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             HHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC
Confidence                             0 010              01123456899999999988766644 55          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||...            .... ....      .+....    ...+.+++.+||+.+ ++|||+
T Consensus       236 ~~pf~~~------------~~~~-~~~~------~~~~~~----~~~~~~li~~~l~~~p~~Rps~  278 (312)
T 2iwi_A          236 DIPFERD------------QEIL-EAEL------HFPAHV----SPDCCALIRRCLAPKPSSRPSL  278 (312)
T ss_dssp             SCSCCSH------------HHHH-HTCC------CCCTTS----CHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCh------------HHHh-hhcc------CCcccC----CHHHHHHHHHHccCChhhCcCH
Confidence            9998731            0111 1111      111112    234567888999999 999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.98  E-value=2.4e-10  Score=92.01  Aligned_cols=81  Identities=10%  Similarity=0.074  Sum_probs=56.7

Q ss_pred             eEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC------------------------C-CC------------
Q 048710           67 VLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS------------------------L-AD------------  108 (208)
Q Consensus        67 ~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i------------------------~-~~------------  108 (208)
                      ..++||||++ |+|.+.+... .....+++.....++.++                        . .+            
T Consensus       112 ~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~  190 (383)
T 3eb0_A          112 YLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK  190 (383)
T ss_dssp             EEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCc
Confidence            3789999999 6888877641 111258888888777777                        0 00            


Q ss_pred             ---CccccccccCCcCccCccccccC-CCCcce----------eEecCCCCCCC
Q 048710          109 ---QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       109 ---~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~~p~~~  148 (208)
                         .........||..|+|||.+.+. .++.++          |++||+.||..
T Consensus       191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  244 (383)
T 3eb0_A          191 KLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG  244 (383)
T ss_dssp             ECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCC
Confidence               11112345678999999998764 478777          99999999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.97  E-value=1.6e-09  Score=84.51  Aligned_cols=129  Identities=12%  Similarity=0.153  Sum_probs=73.0

Q ss_pred             cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------------------------CC---------C
Q 048710           63 LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------------------------LA---------D  108 (208)
Q Consensus        63 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------------------------~~---------~  108 (208)
                      .+.+..++||||+ ++.+.........  .+++.....++.++                         ..         +
T Consensus        94 ~~~~~~~lv~e~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg  170 (318)
T 2dyl_A           94 ITNTDVFIAMELM-GTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG  170 (318)
T ss_dssp             ECSSEEEEEECCC-SEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred             ecCCcEEEEEecc-CCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECC
Confidence            6778899999999 4555555543222  57888877777666                         00         0


Q ss_pred             ------CccccccccCCcCccCccccc-----cCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHhc
Q 048710          109 ------QTYMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMKE  167 (208)
Q Consensus       109 ------~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~  167 (208)
                            .........||+.|+|||.+.     +..++.++          |++||+.||....     ........... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-  244 (318)
T 2dyl_A          171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----TDFEVLTKVLQ-  244 (318)
T ss_dssp             TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHH-
T ss_pred             CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----ccHHHHHHHhc-
Confidence                  001112346899999999984     45566666          9999999987421     11222222222 


Q ss_pred             CcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          168 DRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       168 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +...     .+...  ......+.+++.+||+.+ .+||++
T Consensus       245 ~~~~-----~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~  278 (318)
T 2dyl_A          245 EEPP-----LLPGH--MGFSGDFQSFVKDCLTKDHRKRPKY  278 (318)
T ss_dssp             SCCC-----CCCSS--SCCCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             cCCC-----CCCcc--CCCCHHHHHHHHHHccCChhHCcCH
Confidence            2111     11100  011234567788999999 999986

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.97  E-value=1.1e-09  Score=88.70  Aligned_cols=100  Identities=14%  Similarity=0.213  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC------CCCCCCHHHHHHHHHhC---
Q 048710           48 VNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN------EEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~------~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+.+|+.+|.+++             ...+..++||||++ |+|.+++....      ....+++.....++.++   
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  140 (405)
T 3rgf_A           62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG  140 (405)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHH
Confidence            357899999999998             34678999999997 58888876321      11248888888887777   


Q ss_pred             --------------------C----CC----------Cc----------cccccccCCcCccCcccccc-CCCCcce---
Q 048710          106 --------------------L----AD----------QT----------YMTTQVQGTFGYLDLQYFQS-SPFTEKS---  137 (208)
Q Consensus       106 --------------------~----~~----------~~----------~~~~~~~gt~~y~aPE~~~~-~~~~~ks---  137 (208)
                                          .    ..          .+          .......||+.|+|||++.+ ..++.++   
T Consensus       141 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  220 (405)
T 3rgf_A          141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  220 (405)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHH
T ss_pred             HHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhH
Confidence                                0    00          00          11234568999999999987 4577777   


Q ss_pred             -------eEecCCCCCCC
Q 048710          138 -------NLLTKEKPICL  148 (208)
Q Consensus       138 -------E~~tg~~p~~~  148 (208)
                             |++||+.||..
T Consensus       221 SlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          221 AIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             HHHHHHHHHHHSSCTTCC
T ss_pred             HHHHHHHHHHhCCCCCCC
Confidence                   99999999964

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.96  E-value=3.1e-10  Score=91.79  Aligned_cols=97  Identities=9%  Similarity=0.009  Sum_probs=64.4

Q ss_pred             HHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           52 INEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        52 ~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      .+|+++|..++                 .+....++||||++++.+....+.......+++.....++.++         
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~  159 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS  159 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47999999988                 1122377999999976555443321111258888777777666         


Q ss_pred             ---------------C-CC---------------CccccccccCCcCccCccccccC-CCCcce----------eEecCC
Q 048710          106 ---------------L-AD---------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ---------------~-~~---------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~tg~  143 (208)
                                     . .+               .........||..|+|||.+.+. .++.++          |++||+
T Consensus       160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                           0 00               01112345679999999998764 477777          999999


Q ss_pred             CCCCC
Q 048710          144 KPICL  148 (208)
Q Consensus       144 ~p~~~  148 (208)
                      .||..
T Consensus       240 ~pf~~  244 (394)
T 4e7w_A          240 PLFPG  244 (394)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            99974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.94  E-value=3.1e-09  Score=86.92  Aligned_cols=56  Identities=14%  Similarity=0.256  Sum_probs=44.8

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCC-----CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           46 GKVNKLINEVVILSQIN-----------LET-----EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~-----~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.+.+|+.+|.+++           ...     +..|+||||++ |+|.+++....   .+++.....++.++
T Consensus        67 ~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi  138 (432)
T 3n9x_A           67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNL  138 (432)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHH
Confidence            34568999999999998           112     67999999987 69999998643   58888888888777

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.91  E-value=1.7e-09  Score=85.95  Aligned_cols=100  Identities=10%  Similarity=0.040  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHhhcc-----------c-------CCCeEEEEEeeCCCCChhhHhhc-CCCCCCCCHHHHHHHHHhC---
Q 048710           48 VNKLINEVVILSQIN-----------L-------ETEVLLLVYEFISNGTVYQYINN-QNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~-------~~~~~~lv~ey~~~GsL~~~l~~-~~~~~~l~~~~r~~i~~~i---  105 (208)
                      ...+..|++.+..++           .       .....++||||++++ |.+.+.+ ......+++.....++.++   
T Consensus        63 ~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  141 (360)
T 3e3p_A           63 RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRS  141 (360)
T ss_dssp             CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence            345677777777666           1       112378999999964 4444432 1111257777666666555   


Q ss_pred             -----------------------CC-C---------------CccccccccCCcCccCccccccC-CCCcce--------
Q 048710          106 -----------------------LA-D---------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS--------  137 (208)
Q Consensus       106 -----------------------~~-~---------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks--------  137 (208)
                                             .. +               .........||..|+|||.+.+. .++.++        
T Consensus       142 l~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  221 (360)
T 3e3p_A          142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCI  221 (360)
T ss_dssp             HHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHH
Confidence                                   00 0               01112245689999999998654 477777        


Q ss_pred             --eEecCCCCCCC
Q 048710          138 --NLLTKEKPICL  148 (208)
Q Consensus       138 --E~~tg~~p~~~  148 (208)
                        |++||+.||..
T Consensus       222 l~ell~g~~pf~~  234 (360)
T 3e3p_A          222 FAEMMLGEPIFRG  234 (360)
T ss_dssp             HHHHHHSSCSSCC
T ss_pred             HHHHHhCCCCcCC
Confidence              99999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.90  E-value=7.9e-10  Score=90.11  Aligned_cols=98  Identities=13%  Similarity=0.084  Sum_probs=66.0

Q ss_pred             HHHHHHHHHhhcc---------------c--CCCeEEEEEeeCCCCChhhHhhcC-CCCCCCCHHHHHHHHHhC------
Q 048710           50 KLINEVVILSQIN---------------L--ETEVLLLVYEFISNGTVYQYINNQ-NEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~---------------~--~~~~~~lv~ey~~~GsL~~~l~~~-~~~~~l~~~~r~~i~~~i------  105 (208)
                      .+.+|+++|.+++               .  +....++||||+++ +|.+.+... .....+++.....++.++      
T Consensus        93 ~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~  171 (420)
T 1j1b_A           93 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY  171 (420)
T ss_dssp             SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            3457999999988               1  12236799999995 666665431 111258888877777766      


Q ss_pred             ------------------CCC----------------CccccccccCCcCccCccccccC-CCCcce----------eEe
Q 048710          106 ------------------LAD----------------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NLL  140 (208)
Q Consensus       106 ------------------~~~----------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~~  140 (208)
                                        ..+                .........||..|+|||++.+. .++.++          |++
T Consensus       172 LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell  251 (420)
T 1j1b_A          172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL  251 (420)
T ss_dssp             HHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH
Confidence                              000                01112245689999999998764 677777          999


Q ss_pred             cCCCCCCC
Q 048710          141 TKEKPICL  148 (208)
Q Consensus       141 tg~~p~~~  148 (208)
                      ||+.||..
T Consensus       252 ~G~~pf~~  259 (420)
T 1j1b_A          252 LGQPIFPG  259 (420)
T ss_dssp             HSSCSSCC
T ss_pred             hCCCCCCC
Confidence            99999974

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.84  E-value=8.7e-10  Score=93.23  Aligned_cols=80  Identities=18%  Similarity=0.138  Sum_probs=57.1

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ...++|.+|+++|+++.            .+.+..||||||++||+|.+.|.+..   .++..+   |+.+|        
T Consensus       283 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~---~l~~~~---I~~QIl~AL~ylH  356 (569)
T 4azs_A          283 RNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE---EIDREK---ILGSLLRSLAALE  356 (569)
T ss_dssp             HHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC---CCCHHH---HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC---CCCHHH---HHHHHHHHHHHHH
Confidence            34568999999999995            78889999999999999999998754   355442   44555        


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSS  131 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~  131 (208)
                                                      ...........+||++|||||.+.+.
T Consensus       357 ~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~  414 (569)
T 4azs_A          357 KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN  414 (569)
T ss_dssp             HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC---
T ss_pred             HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC
Confidence                                            01111223456799999999999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.81  E-value=2.6e-08  Score=81.92  Aligned_cols=56  Identities=13%  Similarity=0.192  Sum_probs=44.2

Q ss_pred             hhHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           46 GKVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ...+.|.+|+.+|.+++                ...+..|+||||+ +|+|.+++....   .+++.....++.++
T Consensus        94 ~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi  165 (458)
T 3rp9_A           94 IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNL  165 (458)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHH
Confidence            34578999999999988                1225689999997 589999998653   58888887777776

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.70  E-value=8.6e-09  Score=79.69  Aligned_cols=140  Identities=12%  Similarity=0.101  Sum_probs=83.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+.++.+++           ...+..|+||||+++|+|.+++.+.     ....+..+++.++        
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH  146 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH  146 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH
Confidence            344578999999999988           5678899999999999999999642     2334566677666        


Q ss_pred             -----C----CCCccc---cccccCCcCccCccccccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHH
Q 048710          106 -----L----ADQTYM---TTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLR  163 (208)
Q Consensus       106 -----~----~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~  163 (208)
                           .    +++...   .....++.+|++|       ++.++          |++||+.||............   ..
T Consensus       147 ~~givH~Dikp~NIll~~~g~~kl~~~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~  216 (286)
T 3uqc_A          147 RAGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ER  216 (286)
T ss_dssp             HTTCCCCCCSGGGEEEETTSCEEECSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CB
T ss_pred             HCCCccCCCCcccEEEcCCCCEEEEeccccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HH
Confidence                 1    111110   1123356778775       45555          999999999843221110000   00


Q ss_pred             HHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          164 AMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       164 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .. .+....  ...+.    ......+.+++.+||+.| ++| |+
T Consensus       217 ~~-~~~~~~--~~~~~----~~~~~~l~~li~~~l~~dP~~R-s~  253 (286)
T 3uqc_A          217 DT-AGQPIE--PADID----RDIPFQISAVAARSVQGDGGIR-SA  253 (286)
T ss_dssp             CT-TSCBCC--HHHHC----TTSCHHHHHHHHHHHCTTSSCC-CH
T ss_pred             Hh-ccCCCC--hhhcc----cCCCHHHHHHHHHHcccCCccC-CH
Confidence            00 000000  00011    122345677888999999 999 75

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.66  E-value=6.8e-08  Score=76.10  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=29.4

Q ss_pred             CCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           65 TEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        65 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      .+..||||||+++|++.+.+.+.    .+++.....++.++
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~~----~~~~~~~~~i~~qi  170 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRTK----LSSLATAKSILHQL  170 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTTT----CCCHHHHHHHHHHH
T ss_pred             cCeEEEEEEecCCCccHHHHHhc----CCCHHHHHHHHHHH
Confidence            68899999999999877777542    47888777777766

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.54  E-value=6.4e-08  Score=75.02  Aligned_cols=56  Identities=18%  Similarity=0.257  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHhhcc------------c----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC
Q 048710           49 NKLINEVVILSQIN------------L----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i  105 (208)
                      ..+.+|+.++.++.            .    ..+..++||||+++|+|.+++...... .+++.....++.++
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi  126 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSI  126 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTC-CCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCC-CCCHHHHHHHHHHH
Confidence            45778888874442            1    266789999999999999999875432 58899888888887

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.43  E-value=2.8e-08  Score=80.72  Aligned_cols=117  Identities=11%  Similarity=0.022  Sum_probs=72.2

Q ss_pred             EEEEEeeCCCCChhhHhhc----CCCCCCCCHHHHHHHHHhC------------------------CCC-----------
Q 048710           68 LLLVYEFISNGTVYQYINN----QNEEFPIAWEMQLHIVVDS------------------------LAD-----------  108 (208)
Q Consensus        68 ~~lv~ey~~~GsL~~~l~~----~~~~~~l~~~~r~~i~~~i------------------------~~~-----------  108 (208)
                      .+++|++ .+|+|.+++..    ......++|..++.++.++                        ..+           
T Consensus       180 ~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a  258 (413)
T 3dzo_A          180 RFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  258 (413)
T ss_dssp             EEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             eEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence            4566665 56999999851    1112257888888887777                        000           


Q ss_pred             --CccccccccCCcCccCcccc----------ccCCCCcce----------eEecCCCCCCCCCccCCccHHHHHHHHHh
Q 048710          109 --QTYMTTQVQGTFGYLDLQYF----------QSSPFTEKS----------NLLTKEKPICLTTYEENKSLTTYFLRAMK  166 (208)
Q Consensus       109 --~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ks----------E~~tg~~p~~~~~~~~~~~l~~~~~~~~~  166 (208)
                        .........| +.|+|||.+          .+..++.++          |++||+.||.......             
T Consensus       259 ~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~-------------  324 (413)
T 3dzo_A          259 VRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG-------------  324 (413)
T ss_dssp             EETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS-------------
T ss_pred             eecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh-------------
Confidence              0011234567 999999999          445566676          9999999997432111             


Q ss_pred             cCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          167 EDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       167 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        ....++...  ...+    ..+.+++..||+.+ ++||++
T Consensus       325 --~~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~  358 (413)
T 3dzo_A          325 --GSEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLP  358 (413)
T ss_dssp             --CSGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             --hHHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCH
Confidence              111111100  1122    45677888999999 999985

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.61  E-value=5.8e-06  Score=69.44  Aligned_cols=39  Identities=10%  Similarity=0.217  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhc
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINN   86 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~   86 (208)
                      .+.|.+|++++.+++           ...+..||||||+++|+|.+++.+
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED  432 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH
Confidence            456899999999998           455667999999999999999986

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=94.27  E-value=0.0082  Score=31.90  Aligned_cols=23  Identities=22%  Similarity=0.465  Sum_probs=10.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFMERK   25 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~   25 (208)
                      |+++|++++++....+..++||+
T Consensus        16 ~~vVGvll~vi~~l~~~~~~RRR   38 (44)
T 2jwa_A           16 SAVVGILLVVVLGVVFGILIKRR   38 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhheehh
Confidence            44455444444444434444444

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=93.28  E-value=0.0072  Score=32.19  Aligned_cols=19  Identities=32%  Similarity=0.606  Sum_probs=7.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 048710            7 GMLLLVTKVLLLCKFMERK   25 (208)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~   25 (208)
                      |++++++++..++.+++|+
T Consensus        19 Gv~~v~ii~~~~~~~~RRR   37 (44)
T 2l2t_A           19 GLFILVIVGLTFAVYVRRK   37 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhhh
Confidence            3444333333333333333

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=93.01  E-value=0.079  Score=28.18  Aligned_cols=22  Identities=32%  Similarity=0.330  Sum_probs=8.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Q 048710            4 GGLGMLLLVTKVLLLCKFMERK   25 (208)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (208)
                      ++.|++++++++..++.+++|+
T Consensus        17 VVgGv~~~~ii~~~~~~~~RRr   38 (44)
T 2ks1_B           17 MVGALLLLLVVALGIGLFMRRR   38 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHHHHHhhhh
Confidence            3334444333333333334443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=91.92  E-value=0.065  Score=40.82  Aligned_cols=38  Identities=18%  Similarity=0.287  Sum_probs=30.8

Q ss_pred             hHHHHHHHHHHHhhcc-------cCCCeEEEEEeeCCCCChhhHhh
Q 048710           47 KVNKLINEVVILSQIN-------LETEVLLLVYEFISNGTVYQYIN   85 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-------~~~~~~~lv~ey~~~GsL~~~l~   85 (208)
                      ....|.+|+.+|.+++       .+.+..|+||||+++|+|.+ +.
T Consensus       147 ~~~~~~~E~~~l~~l~~~~v~~~~~~~~~~lvmE~~~g~~L~~-l~  191 (282)
T 1zar_A          147 AIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYR-VR  191 (282)
T ss_dssp             HHHHHHHHHHHHHHTTTSSSCCEEEEETTEEEEECCCCEEGGG-CC
T ss_pred             HHHHHHHHHHHHHhccCCCcCeEEeccceEEEEEecCCCcHHH-cc
Confidence            3467999999999875       44456799999999999999 53

>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}

Probab=88.26  E-value=0.8  Score=22.57  Aligned_cols=24  Identities=8%  Similarity=0.073  Sum_probs=14.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFMERKK   26 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~   26 (208)
                      ..++|++++...+...+.+|+.++
T Consensus        11 t~i~gl~vif~~lg~tflywrgrr   34 (40)
T 2l9u_A           11 TVIAGLVVIFMMLGGTFLYWRGRR   34 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCceeEEEcccc
Confidence            345666666555556666666554

>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A

Probab=80.66  E-value=3  Score=21.43  Aligned_cols=22  Identities=14%  Similarity=0.259  Sum_probs=14.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHH
Q 048710            3 TGGLGMLLLVTKVLLLCKFMER   24 (208)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~   24 (208)
                      |.++|.++++++..++|+..++
T Consensus        24 ~~IVGaLvil~VAGLiysm~RK   45 (46)
T 1pfi_A           24 GYIVGALVILAVAGLIYSMLRK   45 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            4566777777777777765543

>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1

Probab=80.40  E-value=0.27  Score=24.63  Aligned_cols=19  Identities=26%  Similarity=0.600  Sum_probs=6.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 048710            6 LGMLLLVTKVLLLCKFMER   24 (208)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~   24 (208)
                      +|+++++++...+..++||
T Consensus        15 vglll~vii~l~~~~~iRR   33 (35)
T 1iij_A           15 VGVLLFLILVVVVGILIKR   33 (35)
T ss_dssp             HHHHHHHHHTTTTTHHHHH
T ss_pred             HHHHHHHHHHHHhheEEee
Confidence            3433333333333333333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.003

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 27/228 (11%), Positives = 67/228 (29%), Gaps = 75/228 (32%)

Query: 45  EGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFP-- 92
             ++    NEV +L +                 L +V ++    ++Y +++    +F   
Sbjct: 45  PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104

Query: 93  --------IAWEMQ-LH-------------IVVDS-----LAD-----------QTYMTT 114
                    A  M  LH             I +       + D            ++   
Sbjct: 105 KLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164

Query: 115 QVQGTFGYLD---LQYFQSSPFTEKSN----------LLTKEKPICLTTYEENKSLTTYF 161
           Q+ G+  ++    ++    +P++ +S+          L+T + P        N +     
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY------SNINNRDQI 218

Query: 162 LRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           +  +    L      +       +    + +L   CL    +++P   
Sbjct: 219 IFMVGRGYLSPDLSKVR-----SNCPKAMKRLMAECLKKKRDERPLFP 261

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 32/248 (12%), Positives = 78/248 (31%), Gaps = 71/248 (28%)

Query: 18  LCKFMERKKEIKLKQKLFKRNGVKLIYEGKVNKLINEVVILSQIN----------LETEV 67
              +  RKK+I +  K+ K+       +    +++ E  I+ Q++           + E 
Sbjct: 27  QGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA 82

Query: 68  LLLVYEFISNGTVYQYINNQNEEFPIAWEMQ-----------LHI--------------- 101
           L+LV E    G +++++  + EE P++   +           L                 
Sbjct: 83  LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL 142

Query: 102 ---------------VVDSLADQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPI 146
                           + +        +  +    +   +      F+ +S++       
Sbjct: 143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW----SY 198

Query: 147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIV-----VVVKLKKRCLNLN 201
            +T +E      +Y  +  K+ +  E+     +++G + E        +  L   C    
Sbjct: 199 GVTMWE----ALSYGQKPYKKMKGPEVMA--FIEQGKRMECPPECPPELYALMSDCWIYK 252

Query: 202 -EKKPTMR 208
            E +P   
Sbjct: 253 WEDRPDFL 260

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 58/222 (26%)

Query: 40  VKLIYEGKVNK--LINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINN 86
           +K+I EG +++   I E  ++  ++            +   + ++ E+++NG +  Y+  
Sbjct: 33  IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 92

Query: 87  QNEEFPIAWEMQL------------------------HIVVDS---------------LA 107
               F     +++                        + +V+                L 
Sbjct: 93  MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152

Query: 108 DQTYMTTQVQGTFGYLDLQYFQSSPFTEKSNLLTKEKPICLTTYEENKSLTTYFLRAMKE 167
           D+   +   +    +   +    S F+ KS++        +  +E        + R    
Sbjct: 153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA----FGVLMWEIYSLGKMPYERFTNS 208

Query: 168 DRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR 208
           +    I  GL L          V  +   C +   +++PT +
Sbjct: 209 ETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFK 249

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.82
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.81
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.81
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.79
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.77
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.77
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.76
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.76
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.75
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.75
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.75
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.75
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.74
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.73
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.72
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.72
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.72
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.71
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.71
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.71
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.7
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.69
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.68
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.68
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.68
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.68
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.67
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.66
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.66
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.66
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.64
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.64
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.64
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.63
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.63
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.63
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.62
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.6
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.59
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.56
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.52
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.51
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.5
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.48
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.4
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.38
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.35
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.3
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.29
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.24
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.23
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.18
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.18
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.16
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.15
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.11
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.03
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.7

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=7.8e-22  Score=151.51  Aligned_cols=146  Identities=15%  Similarity=0.243  Sum_probs=106.2

Q ss_pred             chhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           44 YEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      .+...++|.+|+++|.+++          ...+..||||||+++|+|.+++...+.  .++|..+..++.++        
T Consensus        49 ~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~ylH  126 (285)
T d1u59a_          49 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLE  126 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999999          555678999999999999999876544  58999999999888        


Q ss_pred             -------------------------C--------CCC--ccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -------------------------L--------ADQ--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -------------------------~--------~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                               +        ...  ........||+.|||||++.++.++.++          |++
T Consensus       127 ~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~l  206 (285)
T d1u59a_         127 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  206 (285)
T ss_dssp             HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             hCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHH
Confidence                                     0        001  1112345689999999999999999998          999


Q ss_pred             c-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 T-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      | |+.||.....   ..    +...+..+..+     .+    +...+..+.+|+.+||+.+ ++||||
T Consensus       207 t~G~~Pf~~~~~---~~----~~~~i~~~~~~-----~~----p~~~~~~l~~li~~cl~~~p~~RPs~  259 (285)
T d1u59a_         207 SYGQKPYKKMKG---PE----VMAFIEQGKRM-----EC----PPECPPELYALMSDCWIYKWEDRPDF  259 (285)
T ss_dssp             TTSCCTTTTCCT---HH----HHHHHHTTCCC-----CC----CTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             hCCCCCCCCCCH---HH----HHHHHHcCCCC-----CC----CCcCCHHHHHHHHHHcCCCHhHCcCH
Confidence            8 8999984321   11    22233333321     11    2223346678888999999 999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.3e-21  Score=146.19  Aligned_cols=151  Identities=13%  Similarity=0.193  Sum_probs=104.1

Q ss_pred             chhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           44 YEGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ++...+.|.+|+.+|.+++          ...+..+|||||+++|+|.++|+....  .++|..++.++.++        
T Consensus        44 ~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~gl~yLH  121 (276)
T d1uwha_          44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLH  121 (276)
T ss_dssp             CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHh
Confidence            4556788999999999999          556778999999999999999986544  59999999998888        


Q ss_pred             -------------------------C---------CCCccccccccCCcCccCcccccc---CCCCcce----------e
Q 048710          106 -------------------------L---------ADQTYMTTQVQGTFGYLDLQYFQS---SPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ks----------E  138 (208)
                                               +         ...........||+.|||||++.+   ..++.++          |
T Consensus       122 ~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~e  201 (276)
T d1uwha_         122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE  201 (276)
T ss_dssp             HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHH
T ss_pred             cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHH
Confidence                                     0         011122345679999999999864   3577777          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||.....      ...+......+...    |.+ ...+...+..+.+++.+||+.+ ++||||
T Consensus       202 l~tg~~Pf~~~~~------~~~~~~~~~~~~~~----p~~-~~~~~~~~~~l~~li~~cl~~dp~~RPt~  260 (276)
T d1uwha_         202 LMTGQLPYSNINN------RDQIIFMVGRGYLS----PDL-SKVRSNCPKAMKRLMAECLKKKRDERPLF  260 (276)
T ss_dssp             HHHSSCTTTTCCC------HHHHHHHHHHTSCC----CCG-GGSCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHCCCCCCCCCh------HHHHHHHHhcCCCC----Ccc-hhccccchHHHHHHHHHHcCCCHhHCcCH
Confidence            9999999974321      12222333333211    111 1112223346778888999999 999997

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.5e-22  Score=150.48  Aligned_cols=142  Identities=16%  Similarity=0.218  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+++|.+++          ...+..+|||||+++|+|.+++++..   .++|..++.++.+|           
T Consensus        51 ~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~  127 (277)
T d1xbba_          51 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESN  127 (277)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCC
Confidence            3568999999999999          44567899999999999999998654   58999999998888           


Q ss_pred             ----------------------C--------CCC--ccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 ----------------------L--------ADQ--TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 ----------------------~--------~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                            +        ...  ........||+.|||||.+.+..++.++          |++| |
T Consensus       128 iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g  207 (277)
T d1xbba_         128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  207 (277)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCC
Confidence                                  0        000  1112345689999999999999999888          9998 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....       ..+...+..+...         +.+...+..+.+|+.+||+.+ ++||||
T Consensus       208 ~~Pf~~~~~-------~~~~~~i~~~~~~---------~~p~~~~~~~~~li~~cl~~dp~~RPs~  257 (277)
T d1xbba_         208 QKPYRGMKG-------SEVTAMLEKGERM---------GCPAGCPREMYDLMNLCWTYDVENRPGF  257 (277)
T ss_dssp             CCSSTTCCH-------HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCCCCCH-------HHHHHHHHcCCCC---------CCCcccCHHHHHHHHHHcCCCHhHCcCH
Confidence            999974321       1123333333221         112223345678888999999 999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3.1e-21  Score=149.18  Aligned_cols=146  Identities=15%  Similarity=0.239  Sum_probs=103.0

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ++...+.|.+|+++|++++           .+.+..++|||||++|+|.+++.....  .++|.+++.++.+|       
T Consensus        67 ~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~--~l~~~~~~~i~~qia~gl~yL  144 (299)
T d1jpaa_          67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYL  144 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccC--CCCHHHHHHHHHHHHHHHHHH
Confidence            4455678999999999999           677889999999999999999987544  59999999998888       


Q ss_pred             --------------------------C--------CCC----ccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 --------------------------L--------ADQ----TYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 --------------------------~--------~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                +        .+.    ........||+.|||||.+.++.++.++          
T Consensus       145 H~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~  224 (299)
T d1jpaa_         145 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW  224 (299)
T ss_dssp             HHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             hhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHH
Confidence                                      0        000    0111234578999999999999999998          


Q ss_pred             eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++| |+.||.....      .+ +......+..         .+.+.+.+..+.+|+.+||+.+ ++||||
T Consensus       225 el~t~g~~Pf~~~~~------~~-~~~~i~~~~~---------~~~~~~~~~~l~~li~~cl~~~P~~RPs~  280 (299)
T d1jpaa_         225 EVMSYGERPYWDMTN------QD-VINAIEQDYR---------LPPPMDCPSALHQLMLDCWQKDRNHRPKF  280 (299)
T ss_dssp             HHHTTSCCTTTTCCH------HH-HHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHhCCCCCCCCCCH------HH-HHHHHHcCCC---------CCCCccchHHHHHHHHHHcCCCHhHCcCH
Confidence            9998 8999874321      11 2222222211         1122233456778888999999 999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=6.3e-21  Score=144.84  Aligned_cols=145  Identities=20%  Similarity=0.333  Sum_probs=97.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..++|.+|++++.+++           ...+..++||||+++|+|.+++.....  .++|..++.++.++          
T Consensus        43 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qia~gl~~lH~~  120 (263)
T d1sm2a_          43 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA  120 (263)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHhhhcc
Confidence            4568999999999999           667889999999999999999987544  58999999988888          


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                                     ............||+.|||||.+.+..++.++          |++|+..
T Consensus       121 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~  200 (263)
T d1sm2a_         121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK  200 (263)
T ss_dssp             TCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCC
Confidence                                           01111122346689999999999999999999          9999544


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      |+...     ..... +......+..  ...|       ..+...+.+++.+||+.+ ++||||+
T Consensus       201 ~~~~~-----~~~~~-~~~~i~~~~~--~~~p-------~~~~~~l~~li~~cl~~~p~~Rps~~  250 (263)
T d1sm2a_         201 IPYEN-----RSNSE-VVEDISTGFR--LYKP-------RLASTHVYQIMNHCWKERPEDRPAFS  250 (263)
T ss_dssp             CTTCS-----CCHHH-HHHHHHHTCC--CCCC-------TTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCC-----CCHHH-HHHHHHhcCC--CCCc-------cccCHHHHHHHHHHccCCHhHCcCHH
Confidence            44311     11122 2222222211  1111       122345678888999999 9999973

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.5e-21  Score=145.12  Aligned_cols=146  Identities=12%  Similarity=0.209  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..++|.+|+++|.+++          ...+..++||||+++|+|.+++...... .++|..+++|+.+|           
T Consensus        51 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~-~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          51 SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4568999999999999          5567789999999999999998765433 58999999999988           


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    ............||++|||||++.++.++.++          |++||..|
T Consensus       130 ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~  209 (272)
T d1qpca_         130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (272)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCC
Confidence                                          11112223456789999999999999999988          99997666


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....     .... +......+..     +.....    ....+.+++.+||+.+ ++||||+
T Consensus       210 ~~~~~-----~~~~-~~~~i~~~~~-----~~~p~~----~~~~l~~li~~cl~~~P~~Rpt~~  258 (272)
T d1qpca_         210 PYPGM-----TNPE-VIQNLERGYR-----MVRPDN----CPEELYQLMRLCWKERPEDRPTFD  258 (272)
T ss_dssp             SSTTC-----CHHH-HHHHHHTTCC-----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCC-----CHHH-HHHHHHhcCC-----CCCccc----ChHHHHHHHHHHcCCCHhHCcCHH
Confidence            54221     1111 2222323211     111122    2345678888999999 9999973

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=3.8e-20  Score=142.18  Aligned_cols=146  Identities=15%  Similarity=0.240  Sum_probs=104.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...++|.+|+++|.+++           .+.+..++||||+++|+|.++|.+.... .++|..+..++.++         
T Consensus        55 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~-~~~~~~~~~i~~qi~~gL~yLH~  133 (287)
T d1opja_          55 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEK  133 (287)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhcccc-chHHHHHHHHHHHHHHHHHHHHH
Confidence            34578999999999999           6778899999999999999999865433 69999998888877         


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                                      ..+.........||+.|||||++.++.++.++          |++||.
T Consensus       134 ~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~  213 (287)
T d1opja_         134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG  213 (287)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred             CCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCC
Confidence                                            11112223345689999999999999999998          999977


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .|+....     .. ..+......+..     +    ..+......+.+++..||+.+ ++||||
T Consensus       214 ~p~~~~~-----~~-~~~~~~i~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~Rps~  263 (287)
T d1opja_         214 MSPYPGI-----DL-SQVYELLEKDYR-----M----ERPEGCPEKVYELMRACWQWNPSDRPSF  263 (287)
T ss_dssp             CCSSTTC-----CH-HHHHHHHHTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCcc-----hH-HHHHHHHhcCCC-----C----CCCccchHHHHHHHHHHcCCCHhHCcCH
Confidence            7764221     11 112233333211     1    122223345778888999999 999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=8.7e-20  Score=139.90  Aligned_cols=148  Identities=14%  Similarity=0.213  Sum_probs=103.2

Q ss_pred             chhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           44 YEGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ++....+|.+|+++|.+++           .+.+..++||||+++|++.+++.+...  .++|.+++.++.++       
T Consensus        49 ~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~gl~~l  126 (283)
T d1mqba_          49 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL  126 (283)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccc--cccHHHHHHHHHHHHHhhhhc
Confidence            3444568999999999998           677889999999999999999886554  59999999999988       


Q ss_pred             --------------------------C--------C--CCccccccccCCcCccCccccccCCCCcce----------eE
Q 048710          106 --------------------------L--------A--DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NL  139 (208)
Q Consensus       106 --------------------------~--------~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~  139 (208)
                                                +        .  ..........||+.|||||++.++.++.++          |+
T Consensus       127 H~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el  206 (283)
T d1mqba_         127 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV  206 (283)
T ss_dssp             HHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHH
Confidence                                      0        0  011122345689999999999999999999          99


Q ss_pred             ecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          140 LTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       140 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +||..|+....     ... .+.....++..         .+.+...+..+.+|+.+||+.+ ++||||+
T Consensus       207 ~t~~~~~~~~~-----~~~-~~~~~i~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~  261 (283)
T d1mqba_         207 MTYGERPYWEL-----SNH-EVMKAINDGFR---------LPTPMDCPSAIYQLMMQCWQQERARRPKFA  261 (283)
T ss_dssp             HTTSCCTTTTC-----CHH-HHHHHHHTTCC---------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HhCCCCccccC-----CHH-HHHHHHhccCC---------CCCchhhHHHHHHHHHHHCcCCHhHCcCHH
Confidence            99766654221     111 12223333311         1222233456778889999999 9999973

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7.2e-20  Score=142.99  Aligned_cols=147  Identities=12%  Similarity=0.239  Sum_probs=102.6

Q ss_pred             hHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCCC--------------------CCCCC
Q 048710           47 KVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQNE--------------------EFPIA   94 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~--------------------~~~l~   94 (208)
                      ....|.+|+.+|.++ +           .+.+..|+|||||++|+|.++|++...                    ...++
T Consensus        83 ~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  162 (325)
T d1rjba_          83 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT  162 (325)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CC
T ss_pred             HHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCC
Confidence            346799999999998 4           678889999999999999999986432                    12488


Q ss_pred             HHHHHHHHHhC---------------------------------C---------CCCccccccccCCcCccCccccccCC
Q 048710           95 WEMQLHIVVDS---------------------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSP  132 (208)
Q Consensus        95 ~~~r~~i~~~i---------------------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~  132 (208)
                      |..++.++.+|                                 +         ...........||+.|||||++.++.
T Consensus       163 ~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         163 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            99999888888                                 0         00111123456799999999999999


Q ss_pred             CCcce----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC
Q 048710          133 FTEKS----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN  201 (208)
Q Consensus       133 ~~~ks----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~  201 (208)
                      ++.++          |++| |+.||......      ..+......+..         .+.+......+.+|+.+||+.+
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~------~~~~~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVD------ANFYKLIQNGFK---------MDQPFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHH------HHHHHHHhcCCC---------CCCCCcCCHHHHHHHHHHcCCC
Confidence            99998          9998 89998743211      112222322211         1122223345678888999999


Q ss_pred             -CCCCCCC
Q 048710          202 -EKKPTMR  208 (208)
Q Consensus       202 -~~RPsm~  208 (208)
                       ++||||+
T Consensus       308 P~~RPt~~  315 (325)
T d1rjba_         308 SRKRPSFP  315 (325)
T ss_dssp             GGGSCCHH
T ss_pred             hhHCcCHH
Confidence             9999973

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.5e-20  Score=138.79  Aligned_cols=144  Identities=14%  Similarity=0.223  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...++|.+|+.++++++           .+.+..++||||+++|+|.+++.....  .++|..+..++.++         
T Consensus        41 ~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~~LH~  118 (258)
T d1k2pa_          41 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLES  118 (258)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGG--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhcccc--CCcHHHHHHHHHHHHHHHHHHhh
Confidence            34578999999999999           667889999999999999999876544  58899998888887         


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                      ............||+.|+|||.+.+..++.++          |++| |
T Consensus       119 ~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g  198 (258)
T d1k2pa_         119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG  198 (258)
T ss_dssp             TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcC
Confidence                                            01111122345689999999999999999998          9998 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....       ..+...+.++..  .       ..|......+.+++.+||+.+ ++|||+
T Consensus       199 ~~Pf~~~~~-------~~~~~~i~~~~~--~-------~~p~~~~~~l~~li~~cl~~dP~~RPt~  248 (258)
T d1k2pa_         199 KMPYERFTN-------SETAEHIAQGLR--L-------YRPHLASEKVYTIMYSCWHEKADERPTF  248 (258)
T ss_dssp             CCTTTTSCH-------HHHHHHHHTTCC--C-------CCCTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             CCCCCCCCH-------HHHHHHHHhCCC--C-------CCcccccHHHHHHHHHHccCCHhHCcCH
Confidence            999874421       122233333321  1       111222345678888999999 999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-20  Score=142.53  Aligned_cols=144  Identities=14%  Similarity=0.250  Sum_probs=96.4

Q ss_pred             hHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ..++|.+|++++++++            .+.+.+++||||+++|+|.++|+..... .++|..+++|+.+|         
T Consensus        43 ~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~-~l~~~~~~~i~~~i~~al~ylH~  121 (262)
T d1byga_          43 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG  121 (262)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHhhcccccc
Confidence            3567999999999998            3346689999999999999999764322 58999999999999         


Q ss_pred             ----------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-CCCCC
Q 048710          106 ----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-KEKPI  146 (208)
Q Consensus       106 ----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g~~p~  146 (208)
                                                  ............+|+.|+|||++.++.+++++          |++| |+.|+
T Consensus       122 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~  201 (262)
T d1byga_         122 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY  201 (262)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             CceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCC
Confidence                                        00011222345689999999999999999999          9999 67776


Q ss_pred             CCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          147 CLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ....   ...+...    ...+..     +.+    +......+.+++.+||+.| .+||||
T Consensus       202 ~~~~---~~~~~~~----i~~~~~-----~~~----~~~~~~~~~~li~~cl~~dP~~Rps~  247 (262)
T d1byga_         202 PRIP---LKDVVPR----VEKGYK-----MDA----PDGCPPAVYEVMKNCWHLDAAMRPSF  247 (262)
T ss_dssp             TTSC---GGGHHHH----HTTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCC---HHHHHHH----HHcCCC-----CCC----CccCCHHHHHHHHHHcccCHhHCcCH
Confidence            6332   1222222    222221     112    2222245667888999999 999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.3e-18  Score=130.98  Aligned_cols=146  Identities=14%  Similarity=0.246  Sum_probs=100.5

Q ss_pred             chhhHHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---
Q 048710           44 YEGKVNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---  105 (208)
                      .+...+.|.+|+++|.+++               ...+..|+||||+++|+|.+++.+..   .+++.....++.++   
T Consensus        48 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~g  124 (270)
T d1t4ha_          48 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKG  124 (270)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHH
Confidence            3445678999999999998               22466899999999999999998643   58888877777766   


Q ss_pred             -----------------------C---------------CCCccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 -----------------------L---------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 -----------------------~---------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                             .               ...........||+.|||||.+.+ .++.++          
T Consensus       125 l~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvily  203 (270)
T d1t4ha_         125 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCML  203 (270)
T ss_dssp             HHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHH
Confidence                                   0               001112345679999999999865 588888          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||+.||....     .. ..+......+..+..+++    ..+    ..+.+++.+||+.+ ++|||+
T Consensus       204 el~~g~~Pf~~~~-----~~-~~~~~~i~~~~~~~~~~~----~~~----~~~~~li~~~l~~dp~~R~s~  260 (270)
T d1t4ha_         204 EMATSEYPYSECQ-----NA-AQIYRRVTSGVKPASFDK----VAI----PEVKEIIEGCIRQNKDERYSI  260 (270)
T ss_dssp             HHHHSSCTTTTCS-----SH-HHHHHHHTTTCCCGGGGG----CCC----HHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHCCCCCCCcc-----cH-HHHHHHHHcCCCCcccCc----cCC----HHHHHHHHHHccCCHhHCcCH
Confidence            9999999997321     11 222333333322211111    222    23567778999999 999986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.9e-19  Score=137.02  Aligned_cols=148  Identities=20%  Similarity=0.281  Sum_probs=97.9

Q ss_pred             chhhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCC-CCCCCCHHHHHHHHHhC----
Q 048710           44 YEGKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQN-EEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~l~~~~r~~i~~~i----  105 (208)
                      ++...+.|.+|+++|.+++             ...+.+|+||||+++|+|.+++.+.. ....+++.....++.++    
T Consensus        43 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al  122 (269)
T d2java1          43 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  122 (269)
T ss_dssp             CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            4455678999999999999             23566899999999999999997532 11258888887777766    


Q ss_pred             -----------------------------------------CCCCccccccccCCcCccCccccccCCCCcce-------
Q 048710          106 -----------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS-------  137 (208)
Q Consensus       106 -----------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks-------  137 (208)
                                                               ............||+.|||||++.+..++.++       
T Consensus       123 ~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGv  202 (269)
T d2java1         123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGC  202 (269)
T ss_dssp             HHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCH
Confidence                                                     11112223457799999999999999999998       


Q ss_pred             ---eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 ---NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 ---E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                         |++||+.||....      . ..+.....++....     +...++    ..+.+++.+||+.+ ++|||+
T Consensus       203 ilyel~tg~~Pf~~~~------~-~~~~~~i~~~~~~~-----~~~~~s----~~l~~li~~~L~~dp~~Rps~  260 (269)
T d2java1         203 LLYELCALMPPFTAFS------Q-KELAGKIREGKFRR-----IPYRYS----DELNEIITRMLNLKDYHRPSV  260 (269)
T ss_dssp             HHHHHHHSSCSCCCSS------H-HHHHHHHHHTCCCC-----CCTTSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHhhCCCCCCCCC------H-HHHHHHHHcCCCCC-----CCcccC----HHHHHHHHHHcCCChhHCcCH
Confidence               9999999997432      1 11222333333321     112222    34567777999999 999986

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.9e-19  Score=134.24  Aligned_cols=140  Identities=19%  Similarity=0.245  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+++|.+++           .+.+..|+||||+++|+|.++|.+..   .+++.....++.++           
T Consensus        50 ~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          50 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            467899999999998           78889999999999999999998644   58888888888877           


Q ss_pred             ---------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 ---------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 ---------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                                 ............||+.|||||++.+..++.++          |++||+.||..
T Consensus       127 ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  206 (263)
T d2j4za1         127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  206 (263)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             eeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC
Confidence                                       00111223456799999999999999999888          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..      ... +......+..      .++...+    ..+.++..+||+.+ ++|||+
T Consensus       207 ~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dp~~R~t~  249 (263)
T d2j4za1         207 NT------YQE-TYKRISRVEF------TFPDFVT----EGARDLISRLLKHNPSQRPML  249 (263)
T ss_dssp             SS------HHH-HHHHHHTTCC------CCCTTSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CC------HHH-HHHHHHcCCC------CCCccCC----HHHHHHHHHHccCCHhHCcCH
Confidence            32      111 2222222221      1111222    34567777999999 999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.7e-19  Score=135.66  Aligned_cols=147  Identities=18%  Similarity=0.280  Sum_probs=102.9

Q ss_pred             chhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------
Q 048710           44 YEGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------  105 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------  105 (208)
                      +.....+|.+|+++|++++            ...+..++|||||++|+|.++++....  .++|..+++++.++      
T Consensus        68 ~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~--~~~~~~~~~i~~qia~gL~~  145 (311)
T d1r0pa_          68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKF  145 (311)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccc--cchHHHHHHHHHHHHHhhhh
Confidence            4445678999999999999            456789999999999999999987544  57888888888888      


Q ss_pred             -----------------------------------CC---CCccccccccCCcCccCccccccCCCCcce----------
Q 048710          106 -----------------------------------LA---DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------  137 (208)
Q Consensus       106 -----------------------------------~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------  137 (208)
                                                         ..   ..........||+.|+|||.+.++.++.++          
T Consensus       146 lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~  225 (311)
T d1r0pa_         146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW  225 (311)
T ss_dssp             HHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHH
Confidence                                               00   011112345689999999999999999998          


Q ss_pred             eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |++||..|+....  ....+..    ....+..+     ..    +......+.+|+.+||+.| ++||||
T Consensus       226 El~t~~~p~~~~~--~~~~~~~----~i~~g~~~-----~~----p~~~~~~l~~li~~cl~~dP~~RPs~  281 (311)
T d1r0pa_         226 ELMTRGAPPYPDV--NTFDITV----YLLQGRRL-----LQ----PEYCPDPLYEVMLKCWHPKAEMRPSF  281 (311)
T ss_dssp             HHHTTSCCSCC--------CHH----HHHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHCCCCCCCCC--CHHHHHH----HHHcCCCC-----CC----cccCcHHHHHHHHHHcCCCHhHCcCH
Confidence            9999888876321  1111111    22233211     11    1122345678888999999 999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.3e-19  Score=139.03  Aligned_cols=146  Identities=12%  Similarity=0.173  Sum_probs=100.0

Q ss_pred             hHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           47 KVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ..+.|.+|+.+|.+++          ...+..++||||+++|+|..+++..... .++|.+++.++.+|           
T Consensus        55 ~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~-~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          55 SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccc-cchHHHHHHHHHHHHHHHHHHhhhh
Confidence            3468999999999999          5556689999999999999999864332 59999999999999           


Q ss_pred             ----------------------C--------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ----------------------L--------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ----------------------~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                            +        .+.........||+.|+|||++.++.++.++          |++||..|
T Consensus       134 ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p  213 (285)
T d1fmka3         134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  213 (285)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCC
Confidence                                  0        0111122346689999999999999999998          99998777


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                      +....     ...+.+ .....+..     +.+    +......+.+++.+||+.+ ++||||+
T Consensus       214 ~~~~~-----~~~~~~-~~i~~~~~-----~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~  262 (285)
T d1fmka3         214 PYPGM-----VNREVL-DQVERGYR-----MPC----PPECPESLHDLMCQCWRKEPEERPTFE  262 (285)
T ss_dssp             SSTTC-----CHHHHH-HHHHTTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCC-----CHHHHH-HHHHhcCC-----CCC----CcccCHHHHHHHHHHcccCHhHCcCHH
Confidence            65321     122222 22222211     111    2222345678888999999 9999973

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.5e-19  Score=134.56  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=99.9

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+++|++++           .+.+..|+||||+++|+|.+++....   .+++.....++.++          
T Consensus        51 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~  127 (288)
T d1uu3a_          51 KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK  127 (288)
T ss_dssp             CHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccc
Confidence            3567999999999998           67889999999999999999998654   58888887777777          


Q ss_pred             -----------------------CCC---------CccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 -----------------------LAD---------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 -----------------------~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                             +-+         .........||+.|||||++.+..++.++          |++||+
T Consensus       128 ~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~  207 (288)
T d1uu3a_         128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL  207 (288)
T ss_dssp             TEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCC
Confidence                                   000         11112346799999999999999999988          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ... +......+..      .+....+    ..+.++..+||+.+ ++|||+
T Consensus       208 ~Pf~~~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~~R~t~  255 (288)
T d1uu3a_         208 PPFRAGN------EYL-IFQKIIKLEY------DFPEKFF----PKARDLVEKLLVLDATKRLGC  255 (288)
T ss_dssp             CSSCCSS------HHH-HHHHHHTTCC------CCCTTCC----HHHHHHHHTTSCSSGGGSTTS
T ss_pred             CCCCCcC------HHH-HHHHHHcCCC------CCCccCC----HHHHHHHHHHccCCHhHCcCH
Confidence            9997431      111 2222223321      1111222    34567777999999 999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.4e-19  Score=134.31  Aligned_cols=145  Identities=10%  Similarity=0.220  Sum_probs=101.2

Q ss_pred             hhhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           45 EGKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      +...+.|.+|+.+|.+++          ...+..|+||||+++|+|.+++.....  .+++..++.++.++         
T Consensus        49 ~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~  126 (273)
T d1mp8a_          49 DSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLES  126 (273)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhcc
Confidence            444578999999999998          556789999999999999999876544  58999999888887         


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                      ............||+.|+|||.+.+..++.++          |++| |
T Consensus       127 ~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g  206 (273)
T d1mp8a_         127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG  206 (273)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred             cCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcC
Confidence                                            01112223456689999999999999999988          9988 8


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..|+.....   ..+.    .....+...     .+..    .....+.+++.+||+.+ ++|||+
T Consensus       207 ~~P~~~~~~---~~~~----~~i~~~~~~-----~~~~----~~~~~~~~li~~cl~~dp~~Rps~  256 (273)
T d1mp8a_         207 VKPFQGVKN---NDVI----GRIENGERL-----PMPP----NCPPTLYSLMTKCWAYDPSRRPRF  256 (273)
T ss_dssp             CCTTTTCCG---GGHH----HHHHTTCCC-----CCCT----TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCCH---HHHH----HHHHcCCCC-----CCCC----CCCHHHHHHHHHHcCCCHhHCcCH
Confidence            889874422   1222    222233221     1112    22345677888999999 999996

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.2e-19  Score=133.50  Aligned_cols=143  Identities=15%  Similarity=0.191  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+.|.+|+.+|.+++           .+.+..||||||+++|+|.++|....   .+++.....++.++           
T Consensus        47 ~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~~  123 (271)
T d1nvra_          47 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIG  123 (271)
T ss_dssp             --CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            456999999999998           77889999999999999999997543   58888888888877           


Q ss_pred             ----------------------C---------CCCccccccccCCcCccCccccccCCCC-cce----------eEecCC
Q 048710          106 ----------------------L---------ADQTYMTTQVQGTFGYLDLQYFQSSPFT-EKS----------NLLTKE  143 (208)
Q Consensus       106 ----------------------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ks----------E~~tg~  143 (208)
                                            +         .+.........||+.|||||++.+..+. .++          |++||+
T Consensus       124 IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~  203 (271)
T d1nvra_         124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  203 (271)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCC
Confidence                                  0         0111123456799999999999887764 555          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||......    ... ...........   .+  ....    ...+.++..+||+.+ ++|||+
T Consensus       204 ~pf~~~~~~----~~~-~~~~~~~~~~~---~~--~~~~----s~~~~~li~~~L~~dP~~R~t~  254 (271)
T d1nvra_         204 LPWDQPSDS----CQE-YSDWKEKKTYL---NP--WKKI----DSAPLALLHKILVENPSARITI  254 (271)
T ss_dssp             CSCSSSSTT----SHH-HHHHHTTCTTS---TT--GGGS----CHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCChH----HHH-HHHHhcCCCCC---Cc--cccC----CHHHHHHHHHHcCCChhHCcCH
Confidence            999743211    111 11111111110   00  0111    234456777999999 999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1e-18  Score=135.90  Aligned_cols=144  Identities=13%  Similarity=0.265  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++|.+|+++|.+++          ...+..++++||+.+|+|.+++.....  .++|..+++++.+|          
T Consensus        53 ~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          53 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEEeccCCccccccccccc--CCCHHHHHHHHHHHHHHHHHHHHc
Confidence            34678999999999998          445677899999999999999987644  58999999888887          


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEec-C
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-K  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-g  142 (208)
                                                      ............||+.|||||.+.++.++.++          |++| |
T Consensus       131 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g  210 (317)
T d1xkka_         131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  210 (317)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCC
Confidence                                            11112223445689999999999999999998          9999 7


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ..||.....   ..+    ......+..         ...+......+.+|+.+||+.+ .+||||
T Consensus       211 ~~p~~~~~~---~~~----~~~i~~~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~  260 (317)
T d1xkka_         211 SKPYDGIPA---SEI----SSILEKGER---------LPQPPICTIDVYMIMVKCWMIDADSRPKF  260 (317)
T ss_dssp             CCTTTTSCG---GGH----HHHHHHTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCCH---HHH----HHHHHcCCC---------CCCCcccCHHHHHHHHHhCCCChhhCcCH
Confidence            888874321   122    222323321         1112223345678888999999 999997

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=2.2e-18  Score=133.38  Aligned_cols=144  Identities=17%  Similarity=0.248  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+.+|.+++           .+.+..|||||||++|+|.++|.+..   .+++.....++.++           
T Consensus        51 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~  127 (307)
T d1a06a_          51 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLG  127 (307)
T ss_dssp             ----CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhhce
Confidence            356889999999999           77889999999999999999998643   58888888888877           


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                                     ..+.........||+.|||||++.+..++.++          |++||+.
T Consensus       128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~  207 (307)
T d1a06a_         128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP  207 (307)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCC
Confidence                                           00111122356799999999999999999988          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ... +......+...  .+.....    .....+.++..+||+.+ ++|||+
T Consensus       208 Pf~~~~------~~~-~~~~i~~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~  258 (307)
T d1a06a_         208 PFYDEN------DAK-LFEQILKAEYE--FDSPYWD----DISDSAKDFIRHLMEKDPEKRFTC  258 (307)
T ss_dssp             SCCCSS------HHH-HHHHHHTTCCC--CCTTTTT----TSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCC------HHH-HHHHHhccCCC--CCCcccc----CCCHHHHHHHHHHccCCHhHCcCH
Confidence            997421      111 12222222211  1111111    22235667788999999 999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.2e-17  Score=128.40  Aligned_cols=143  Identities=14%  Similarity=0.264  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.+|++++           .+.+..||||||+++|+|.+++.+.    .++..+...++.++          
T Consensus        60 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~  135 (293)
T d1yhwa1          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN  135 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567999999999998           6778899999999999999988753    48888888888777          


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    ............||+.|||||++.+..++.++          |++||+.|
T Consensus       136 ~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~P  215 (293)
T d1yhwa1         136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (293)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCC
Confidence                                          01112223456799999999999999999888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ....+......+.. ..       ..+......+.++..+||+.+ ++|||+
T Consensus       216 f~~~~------~~~~~~~~~~~~~~-~~-------~~~~~~s~~~~~li~~~L~~dP~~R~s~  264 (293)
T d1yhwa1         216 YLNEN------PLRALYLIATNGTP-EL-------QNPEKLSAIFRDFLNRCLDMDVEKRGSA  264 (293)
T ss_dssp             TTTSC------HHHHHHHHHHHCSC-CC-------SSGGGSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             CCCCC------HHHHHHHHHhCCCC-CC-------CCcccCCHHHHHHHHHHccCChhHCcCH
Confidence            97321      12222222222211 11       111122234567777999999 999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.6e-18  Score=131.80  Aligned_cols=147  Identities=15%  Similarity=0.164  Sum_probs=101.5

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+++|++++           .+.+..+||||||++|+|.+++.+..+  .+++.+...++.++        
T Consensus        50 ~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH  127 (288)
T d2jfla1          50 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLH  127 (288)
T ss_dssp             SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999998           778899999999999999999876443  58898888888877        


Q ss_pred             -------------------------CCCCc-------cccccccCCcCccCccccc-----cCCCCcce----------e
Q 048710          106 -------------------------LADQT-------YMTTQVQGTFGYLDLQYFQ-----SSPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------~~~~~-------~~~~~~~gt~~y~aPE~~~-----~~~~~~ks----------E  138 (208)
                                               +-+.+       .......||+.|||||++.     ...++.++          |
T Consensus       128 ~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilye  207 (288)
T d2jfla1         128 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE  207 (288)
T ss_dssp             HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHH
T ss_pred             HCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHH
Confidence                                     11111       1123567999999999984     45677777          9


Q ss_pred             EecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          139 LLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       139 ~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ++||+.||......   ..   +.... .+......       .+......+.+++.+||+.+ ++|||+
T Consensus       208 mltg~~Pf~~~~~~---~~---~~~i~-~~~~~~~~-------~~~~~s~~~~~li~~~L~~dp~~R~t~  263 (288)
T d2jfla1         208 MAEIEPPHHELNPM---RV---LLKIA-KSEPPTLA-------QPSRWSSNFKDFLKKCLEKNVDARWTT  263 (288)
T ss_dssp             HHHSSCTTTTSCGG---GH---HHHHH-HSCCCCCS-------SGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HhhCCCCCCCCCHH---HH---HHHHH-cCCCCCCC-------ccccCCHHHHHHHHHHccCChhHCcCH
Confidence            99999999743211   11   11122 22221111       11122335567778999999 999985

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-18  Score=133.62  Aligned_cols=147  Identities=14%  Similarity=0.221  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHhhc-c-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------------CCCCCCHHHHHH
Q 048710           46 GKVNKLINEVVILSQI-N-----------LETEVLLLVYEFISNGTVYQYINNQN-------------EEFPIAWEMQLH  100 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l-~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------------~~~~l~~~~r~~  100 (208)
                      ...++|.+|+++|.++ +           .+.+..++||||+++|+|.++|+...             ....++|.++..
T Consensus        52 ~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  131 (309)
T d1fvra_          52 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  131 (309)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence            3456899999999998 4           67889999999999999999997541             123699999999


Q ss_pred             HHHhC---------------------------------C------CCCccccccccCCcCccCccccccCCCCcce----
Q 048710          101 IVVDS---------------------------------L------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----  137 (208)
Q Consensus       101 i~~~i---------------------------------~------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----  137 (208)
                      ++.||                                 +      ...........||..|+|||.+.++.++.++    
T Consensus       132 ~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwS  211 (309)
T d1fvra_         132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS  211 (309)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeeh
Confidence            99988                                 0      0011112245689999999999999999988    


Q ss_pred             ------eEecCCC-CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCCC
Q 048710          138 ------NLLTKEK-PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTMR  208 (208)
Q Consensus       138 ------E~~tg~~-p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm~  208 (208)
                            |++||.. |+....      ..+ +...+.++..     +.+    +......+.+|+.+||+.+ ++||||+
T Consensus       212 fGvil~ell~~~~~p~~~~~------~~~-~~~~i~~~~~-----~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~  274 (309)
T d1fvra_         212 YGVLLWEIVSLGGTPYCGMT------CAE-LYEKLPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSFA  274 (309)
T ss_dssp             HHHHHHHHHTTSCCTTTTCC------HHH-HHHHGGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hHHHHHHHHhcCCCCCCCCC------HHH-HHHHHHhcCC-----CCC----CccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                  9999765 565321      111 2223333321     111    1222345677888999999 9999973

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.5e-18  Score=132.31  Aligned_cols=145  Identities=14%  Similarity=0.214  Sum_probs=101.1

Q ss_pred             hhHHHHHHHHHHHhhcc----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           46 GKVNKLINEVVILSQIN----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ...++|.+|+.+|.+++          ...+..++||||+++|++.+++....+  .++|..++.++.++          
T Consensus        53 ~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~  130 (273)
T d1u46a_          53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESK  130 (273)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheeeeeecCcchhhhhhcccC--CCCHHHHHHHHHHHHHHHHHhhhC
Confidence            34568999999999998          445678999999999999999876544  58999999888888          


Q ss_pred             -----------------------C--------C--CCccccccccCCcCccCccccccCCCCcce----------eEec-
Q 048710          106 -----------------------L--------A--DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLT-  141 (208)
Q Consensus       106 -----------------------~--------~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~t-  141 (208)
                                             +        .  ..........||..|+|||.+.+..++.++          |++| 
T Consensus       131 ~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~  210 (273)
T d1u46a_         131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY  210 (273)
T ss_dssp             TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhC
Confidence                                   0        0  111122345678999999999999999888          9998 


Q ss_pred             CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          142 KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       142 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |+.||....      ..+.+......+..+     ......    +..+.+|+..||+.+ ++||||
T Consensus       211 G~~Pf~~~~------~~~~~~~i~~~~~~~-----~~~~~~----~~~l~~li~~cl~~dp~~RPt~  262 (273)
T d1u46a_         211 GQEPWIGLN------GSQILHKIDKEGERL-----PRPEDC----PQDIYNVMVQCWAHKPEDRPTF  262 (273)
T ss_dssp             SCCTTTTCC------HHHHHHHHHTSCCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCCCcC------HHHHHHHHHhCCCCC-----CCcccc----cHHHHHHHHHHcCCChhHCcCH
Confidence            899987432      222233333332211     111122    235678888999999 999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-17  Score=128.73  Aligned_cols=147  Identities=14%  Similarity=0.187  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHhhcc-------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHHH
Q 048710           46 GKVNKLINEVVILSQIN-------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQL   99 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r~   99 (208)
                      ...+.|..|..++.++.             ...+..++|||||++|+|.++|+....             ...++|.+++
T Consensus        58 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  137 (299)
T d1ywna1          58 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI  137 (299)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHH
Confidence            34567889999888875             445678999999999999999975421             1258899999


Q ss_pred             HHHHhC------------------------------------------CCCCccccccccCCcCccCccccccCCCCcce
Q 048710          100 HIVVDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS  137 (208)
Q Consensus       100 ~i~~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  137 (208)
                      .++.+|                                          ............||+.|||||.+.++.++.++
T Consensus       138 ~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~s  217 (299)
T d1ywna1         138 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  217 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCccc
Confidence            888887                                          01111123456799999999999999999998


Q ss_pred             ----------eEecC-CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          138 ----------NLLTK-EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       138 ----------E~~tg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                                |++|| ..||.....      ...+.....++...     .+...    ....+.+++.+||+.+ ++||
T Consensus       218 DiwS~Gvil~ellt~~~~p~~~~~~------~~~~~~~~~~~~~~-----~~~~~----~~~~l~~li~~cl~~dP~~Rp  282 (299)
T d1ywna1         218 DVWSFGVLLWEIFSLGASPYPGVKI------DEEFCRRLKEGTRM-----RAPDY----TTPEMYQTMLDCWHGEPSQRP  282 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCC------SHHHHHHHHHTCCC-----CCCTT----CCHHHHHHHHHHTCSSGGGSC
T ss_pred             ceeehHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhcCCCC-----CCCcc----CCHHHHHHHHHHcCCChhHCc
Confidence                      99996 456653211      11233333333221     11112    2335678888999999 9999


Q ss_pred             CC
Q 048710          206 TM  207 (208)
Q Consensus       206 sm  207 (208)
                      |+
T Consensus       283 t~  284 (299)
T d1ywna1         283 TF  284 (299)
T ss_dssp             CH
T ss_pred             CH
Confidence            97

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.68  E-value=2.3e-17  Score=125.79  Aligned_cols=145  Identities=16%  Similarity=0.195  Sum_probs=95.4

Q ss_pred             hhhHHHHHHHHHHHhhcc---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           45 EGKVNKLINEVVILSQIN---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      +.....|.+|+++|.+++               ......||||||+++|+|.+++....   .+++.+...++.++    
T Consensus        48 ~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al  124 (277)
T d1o6ya_          48 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQAL  124 (277)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHH
Confidence            344568999999999998               12235889999999999999997654   58899888888888    


Q ss_pred             ---------------------------------------CCCCccccccccCCcCccCccccccCCCCcce---------
Q 048710          106 ---------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                                             ............||+.|||||.+.+..++.++         
T Consensus       125 ~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  204 (277)
T d1o6ya_         125 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL  204 (277)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHH
Confidence                                                   00111123456799999999999999999988         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCccc-ccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLF-EIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                       |++||+.||....      ..+........+... ....+    ..    ...+.++..+||+.+ ++||+
T Consensus       205 yelltG~~Pf~~~~------~~~~~~~~~~~~~~~~~~~~~----~~----s~~l~~li~~~L~~dp~~R~~  262 (277)
T d1o6ya_         205 YEVLTGEPPFTGDS------PVSVAYQHVREDPIPPSARHE----GL----SADLDAVVLKALAKNPENRYQ  262 (277)
T ss_dssp             HHHHHSSCSCCCSS------HHHHHHHHHHCCCCCGGGTSS----SC----CHHHHHHHHHHTCSSGGGSCS
T ss_pred             HHHHhCCCCCCCcC------HHHHHHHHHhcCCCCCchhcc----CC----CHHHHHHHHHHccCCHhHCHh
Confidence             9999999997432      223333344333221 11111    12    234567777999999 99994

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.68  E-value=3.2e-17  Score=128.91  Aligned_cols=147  Identities=12%  Similarity=0.158  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ...+.|.+|+.+|.+++           .+.+..|||||||++|+|.++|.+..+  .+++.....++.++         
T Consensus        65 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~  142 (350)
T d1koaa2          65 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHE  142 (350)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567999999999998           778899999999999999999976543  58999888888888         


Q ss_pred             ---------------C-----------------CCCccccccccCCcCccCccccccCCCCcce----------eEecCC
Q 048710          106 ---------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKE  143 (208)
Q Consensus       106 ---------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~  143 (208)
                                     .                 .+.........||+.|||||++.+..++.++          |++||+
T Consensus       143 ~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~  222 (350)
T d1koaa2         143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL  222 (350)
T ss_dssp             TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSS
T ss_pred             cCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCC
Confidence                           0                 0111122346789999999999999999888          999999


Q ss_pred             CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          144 KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       144 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .||....      ..+.+.... .+...  .++......    ...+.++..+||+.| ++|||+
T Consensus       223 ~Pf~~~~------~~~~~~~i~-~~~~~--~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~  274 (350)
T d1koaa2         223 SPFGGEN------DDETLRNVK-SCDWN--MDDSAFSGI----SEDGKDFIRKLLLADPNTRMTI  274 (350)
T ss_dssp             CSSCCSS------HHHHHHHHH-HTCCC--SCCGGGGGC----CHHHHHHHHHHCCSSGGGSCCH
T ss_pred             CCCCCCC------HHHHHHHHH-hCCCC--CCcccccCC----CHHHHHHHHHHccCChhHCcCH
Confidence            9997432      222222222 22110  111111112    234567777999999 999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=5.5e-18  Score=130.81  Aligned_cols=146  Identities=11%  Similarity=0.227  Sum_probs=102.6

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC---------------------CCCCC
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN---------------------EEFPI   93 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~---------------------~~~~l   93 (208)
                      ...++|.+|+++|++++           ...+..++||||+++|+|.++|+...                     ....+
T Consensus        58 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  137 (301)
T d1lufa_          58 DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL  137 (301)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred             HHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCC
Confidence            34568999999999998           77788999999999999999997432                     12248


Q ss_pred             CHHHHHHHHHhC------------------------------------------CCCCccccccccCCcCccCccccccC
Q 048710           94 AWEMQLHIVVDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSS  131 (208)
Q Consensus        94 ~~~~r~~i~~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~  131 (208)
                      +|..++.|+.++                                          ..+.....+...||+.|+|||.+.+.
T Consensus       138 ~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  217 (301)
T d1lufa_         138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  217 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccC
Confidence            999999999888                                          01111222356688999999999999


Q ss_pred             CCCcce----------eEecCC-CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcC
Q 048710          132 PFTEKS----------NLLTKE-KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNL  200 (208)
Q Consensus       132 ~~~~ks----------E~~tg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~  200 (208)
                      .++.++          |++||. .||....      ..+ +...+.++..+.     +....    +..+.+|+.+||+.
T Consensus       218 ~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~------~~e-~~~~v~~~~~~~-----~p~~~----~~~~~~li~~cl~~  281 (301)
T d1lufa_         218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEE-VIYYVRDGNILA-----CPENC----PLELYNLMRLCWSK  281 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHH-HHHHHHTTCCCC-----CCTTC----CHHHHHHHHHHTCS
T ss_pred             CCChhhhhccchhhHHHHHccCCCCCCCCC------HHH-HHHHHHcCCCCC-----CCccc----hHHHHHHHHHHcCC
Confidence            999998          999985 5665321      112 222334443322     11222    33577889999999


Q ss_pred             C-CCCCCC
Q 048710          201 N-EKKPTM  207 (208)
Q Consensus       201 ~-~~RPsm  207 (208)
                      + ++||||
T Consensus       282 ~P~~RPt~  289 (301)
T d1lufa_         282 LPADRPSF  289 (301)
T ss_dssp             SGGGSCCH
T ss_pred             ChhHCcCH
Confidence            9 999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.5e-17  Score=125.79  Aligned_cols=145  Identities=16%  Similarity=0.252  Sum_probs=102.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.+|.+++           .+.+..|||||||++|+|.++|.+..   .+++.....++.++          
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~  132 (293)
T d1jksa_          56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL  132 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhc
Confidence            3578999999999998           78889999999999999999998653   58888888888777          


Q ss_pred             --------------C-------------------CCCccccccccCCcCccCccccccCCCCcce----------eEecC
Q 048710          106 --------------L-------------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------~-------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg  142 (208)
                                    .                   .+.........||+.|+|||++.+..++.++          |++||
T Consensus       133 ~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g  212 (293)
T d1jksa_         133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  212 (293)
T ss_dssp             TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcC
Confidence                          0                   0011122356789999999999999999888          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||....      ..+... ....+...  ..+....    .....+.++..+||+.+ ++|||+
T Consensus       213 ~~Pf~~~~------~~~~~~-~i~~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~  265 (293)
T d1jksa_         213 ASPFLGDT------KQETLA-NVSAVNYE--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTI  265 (293)
T ss_dssp             SCSSCCSS------HHHHHH-HHHTTCCC--CCHHHHT----TSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCCCC------HHHHHH-HHHhcCCC--CCchhcC----CCCHHHHHHHHHHccCChhHCcCH
Confidence            99997432      111112 22222110  0111111    12234567778999999 999986

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.66  E-value=1.2e-17  Score=129.36  Aligned_cols=145  Identities=14%  Similarity=0.176  Sum_probs=100.9

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      ....+.|.+|+++|.+++           .+.+..|+|||||++|+|..++....   .+++.+...++.++        
T Consensus        56 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH  132 (309)
T d1u5ra_          56 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLH  132 (309)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            344568999999999998           67889999999999999987776543   58999998888888        


Q ss_pred             -------------------------C---CCCccccccccCCcCccCcccccc---CCCCcce----------eEecCCC
Q 048710          106 -------------------------L---ADQTYMTTQVQGTFGYLDLQYFQS---SPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------------------~---~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ks----------E~~tg~~  144 (208)
                                               +   ...........||+.|||||++.+   +.++.++          |++||+.
T Consensus       133 ~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~  212 (309)
T d1u5ra_         133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  212 (309)
T ss_dssp             HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             hCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCC
Confidence                                     0   011112345679999999999864   4577777          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ....+.... .+..+...+.    .++    ..+.+++.+||+.+ ++|||+
T Consensus       213 Pf~~~~------~~~~~~~i~-~~~~~~~~~~----~~s----~~~~~li~~~L~~dP~~Rpt~  261 (309)
T d1u5ra_         213 PLFNMN------AMSALYHIA-QNESPALQSG----HWS----EYFRNFVDSCLQKIPQDRPTS  261 (309)
T ss_dssp             TTTTSC------HHHHHHHHH-HSCCCCCSCT----TSC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCC------HHHHHHHHH-hCCCCCCCCC----CCC----HHHHHHHHHHCcCChhHCcCH
Confidence            987321      122222222 2222111111    122    34567777999999 999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.4e-17  Score=128.46  Aligned_cols=148  Identities=16%  Similarity=0.219  Sum_probs=105.2

Q ss_pred             chhhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCC-------------CCCCCHHHH
Q 048710           44 YEGKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNE-------------EFPIAWEMQ   98 (208)
Q Consensus        44 ~~~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~l~~~~r   98 (208)
                      .+....+|.+|...+.++.            .+.+..++||||+++|+|.++|.....             ...++|..+
T Consensus        58 ~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  137 (299)
T d1fgka_          58 TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL  137 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHH
Confidence            3445678999999999883            677889999999999999999975431             125899999


Q ss_pred             HHHHHhC------------------------------------------CCCCccccccccCCcCccCccccccCCCCcc
Q 048710           99 LHIVVDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus        99 ~~i~~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                      ++++.++                                          ............||+.|+|||.+.++.++.+
T Consensus       138 ~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k  217 (299)
T d1fgka_         138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ  217 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCch
Confidence            9999988                                          0001111234668999999999999999999


Q ss_pred             e----------eEec-CCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCC
Q 048710          137 S----------NLLT-KEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKK  204 (208)
Q Consensus       137 s----------E~~t-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~R  204 (208)
                      +          |++| |..||....       ...+...+..+..+     .....    ....+.+++.+||+.+ ++|
T Consensus       218 ~DiwS~Gvvl~ell~~g~~p~~~~~-------~~~~~~~i~~~~~~-----~~p~~----~~~~l~~li~~cl~~dP~~R  281 (299)
T d1fgka_         218 SDVWSFGVLLWEIFTLGGSPYPGVP-------VEELFKLLKEGHRM-----DKPSN----CTNELYMMMRDCWHAVPSQR  281 (299)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHHHTTCCC-----CCCSS----CCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhHHhHHHHHHhccCCCCCCCCCC-------HHHHHHHHHcCCCC-----CCCcc----chHHHHHHHHHHccCCHhHC
Confidence            9          9998 688876332       12233344333221     11112    2345778888999999 999


Q ss_pred             CCC
Q 048710          205 PTM  207 (208)
Q Consensus       205 Psm  207 (208)
                      ||+
T Consensus       282 ps~  284 (299)
T d1fgka_         282 PTF  284 (299)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            996

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.4e-17  Score=129.01  Aligned_cols=148  Identities=15%  Similarity=0.229  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCC---------------CCCCCHHHH
Q 048710           46 GKVNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNE---------------EFPIAWEMQ   98 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~---------------~~~l~~~~r   98 (208)
                      .....|.+|+.++.++.            .+.+..++|||||++|+|.++|+....               ...++|..+
T Consensus        68 ~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (311)
T d1t46a_          68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL  147 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHH
Confidence            34567999999999984            677789999999999999999986431               125889999


Q ss_pred             HHHHHhC------------------------------------------CCCCccccccccCCcCccCccccccCCCCcc
Q 048710           99 LHIVVDS------------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEK  136 (208)
Q Consensus        99 ~~i~~~i------------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k  136 (208)
                      ..++.+|                                          ............||+.|+|||.+.++.++.+
T Consensus       148 ~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  227 (311)
T d1t46a_         148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE  227 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCc
Confidence            9888888                                          1111222345678999999999999999999


Q ss_pred             e----------eEecC-CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCC
Q 048710          137 S----------NLLTK-EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKK  204 (208)
Q Consensus       137 s----------E~~tg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~R  204 (208)
                      +          ||+|+ ..|+.....      ...+......+..     +    ..+......+.+|+.+||+.+ ++|
T Consensus       228 ~DIwS~G~~l~ellt~g~p~~~~~~~------~~~~~~~i~~~~~-----~----~~~~~~~~~l~~Li~~cl~~dP~~R  292 (311)
T d1t46a_         228 SDVWSYGIFLWELFSLGSSPYPGMPV------DSKFYKMIKEGFR-----M----LSPEHAPAEMYDIMKTCWDADPLKR  292 (311)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCS------SHHHHHHHHHTCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             ccccchHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhcCCC-----C----CCcccccHHHHHHHHHHcCCChhHC
Confidence            8          99995 544442211      1112223333311     1    111122345678888999999 999


Q ss_pred             CCCC
Q 048710          205 PTMR  208 (208)
Q Consensus       205 Psm~  208 (208)
                      |||+
T Consensus       293 Ps~~  296 (311)
T d1t46a_         293 PTFK  296 (311)
T ss_dssp             CCHH
T ss_pred             cCHH
Confidence            9973

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=8e-17  Score=124.58  Aligned_cols=146  Identities=14%  Similarity=0.207  Sum_probs=102.7

Q ss_pred             hhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCC-------CCCCCCHHHHHHHHHhC--
Q 048710           46 GKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQN-------EEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~-------~~~~l~~~~r~~i~~~i--  105 (208)
                      .....|.+|++++.+++           ...+..++||||+++|+|.++++...       ....++|..+.+++.++  
T Consensus        65 ~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~  144 (308)
T d1p4oa_          65 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD  144 (308)
T ss_dssp             HHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHH
Confidence            34457999999999999           67788999999999999999987531       12257899999998888  


Q ss_pred             -------------------------------CC---------CCccccccccCCcCccCccccccCCCCcce--------
Q 048710          106 -------------------------------LA---------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 -------------------------------~~---------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                                                     +-         ..........||+.|+|||.+.++.++.++        
T Consensus       145 gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~i  224 (308)
T d1p4oa_         145 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  224 (308)
T ss_dssp             HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHH
Confidence                                           00         011112344689999999999999999888        


Q ss_pred             --eEecCC-CCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKE-KPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++||. .|+...      ....... ...++....         .+......+.+++.+||+.+ ++||||
T Consensus       225 l~El~t~~~~p~~~~------~~~~~~~-~i~~~~~~~---------~p~~~~~~l~~li~~cl~~~P~~RPs~  282 (308)
T d1p4oa_         225 LWEIATLAEQPYQGL------SNEQVLR-FVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSF  282 (308)
T ss_dssp             HHHHHHTSCCTTTTS------CHHHHHH-HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHhCCCCCCCCC------CHHHHHH-HHHhCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCH
Confidence              999985 666532      2222222 233333211         11222346778888999999 999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.6e-17  Score=127.35  Aligned_cols=149  Identities=13%  Similarity=0.113  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHhhc-c---------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-------
Q 048710           49 NKLINEVVILSQI-N---------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l-~---------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-------  105 (208)
                      ..+.+|+.++.++ +               ...+..|||||||+||+|.++|.+.... .+++.+...++.++       
T Consensus        49 ~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~-~l~e~~~~~i~~qi~~al~yl  127 (335)
T d2ozaa1          49 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYL  127 (335)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCC-CEEHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCC-CcCHHHHHHHHHHHHHHHHHH
Confidence            4577899887665 3               1246689999999999999999865332 68998888888887       


Q ss_pred             -----------------C------------------CCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------L------------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                       .                  ...........||+.|||||++.+..++.++          |++
T Consensus       128 H~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~ll  207 (335)
T d2ozaa1         128 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  207 (335)
T ss_dssp             HHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHT
T ss_pred             HHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHh
Confidence                             0                  0011222456799999999999999999998          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||+.||.....   ......+......+..      ..+..........+.++..+|++.+ ++|||+
T Consensus       208 tg~~Pf~~~~~---~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~  266 (335)
T d2ozaa1         208 CGYPPFYSNHG---LAISPGMKTRIRMGQY------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  266 (335)
T ss_dssp             TSSCSCEETTC---C--------CCCSCSS------SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             hCCCCCCCCCH---HHHHHHHHHHHhcCCC------CCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence            99999974321   1111111111111110      0111111233456778888999999 999986

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.8e-16  Score=123.91  Aligned_cols=140  Identities=11%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....+.+|+.+|++++           .+.+.+|+|||||++|+|.+++.+..   .++......++.++          
T Consensus        48 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~  124 (337)
T d1o6la_          48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhc
Confidence            3567899999999998           78889999999999999999998754   35665555455544          


Q ss_pred             ------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                                    ............||+.|||||++.+..++.++          |++||+.|
T Consensus       125 ~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~p  204 (337)
T d1o6la_         125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCC
Confidence                                          01112223457799999999999999999988          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPT  206 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPs  206 (208)
                      |....      ... +......+.+      .++...+    ..+.++...||+.+ .+||+
T Consensus       205 f~~~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         205 FYNQD------HER-LFELILMEEI------RFPRTLS----PEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             SCCSS------HHH-HHHHHHHCCC------CCCTTSC----HHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCcC------HHH-HHHHHhcCCC------CCCccCC----HHHHHHHHhhccCCchhhcc
Confidence            98432      111 2222222221      1112222    23456777999999 99996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.63  E-value=3e-16  Score=123.36  Aligned_cols=146  Identities=15%  Similarity=0.174  Sum_probs=102.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ....|.+|+++|.+++           .+.+..|||||||++|+|.+++.....  .+++.+...|+.+|          
T Consensus        69 ~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_          69 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999998           778899999999999999998876543  58888888888777          


Q ss_pred             --------------C--C---------------CCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------L--A---------------DQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------~--~---------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                    .  .               ..........||+.|||||++.+..++.++          ||+||+.
T Consensus       147 ~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~  226 (352)
T d1koba_         147 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS  226 (352)
T ss_dssp             TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             CeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCC
Confidence                          0  0               011112346789999999999999999988          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||....      ....+.. ...+...  +++......    ...+.+++.+||+.+ .+|||+
T Consensus       227 Pf~~~~------~~~~~~~-i~~~~~~--~~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~  277 (352)
T d1koba_         227 PFAGED------DLETLQN-VKRCDWE--FDEDAFSSV----SPEAKDFIKNLLQKEPRKRLTV  277 (352)
T ss_dssp             SSCCSS------HHHHHHH-HHHCCCC--CCSSTTTTS----CHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCC------HHHHHHH-HHhCCCC--CCcccccCC----CHHHHHHHHHHccCChhHCcCH
Confidence            997431      1122222 2222211  111111122    234567788999999 999985

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.4e-17  Score=126.32  Aligned_cols=101  Identities=17%  Similarity=0.256  Sum_probs=79.9

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +.....|.+|+.+|.+++           .+.+..||||||+++|+|.+++.+..   .+++.....++.++        
T Consensus        45 ~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH  121 (322)
T d1s9ja_          45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLR  121 (322)
T ss_dssp             TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            344578999999999998           77888999999999999999998654   47888777777666        


Q ss_pred             --------------------------CCCCc-----cccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 --------------------------LADQT-----YMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 --------------------------~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                                +-+.+     .......||+.|||||++.+..++.++          |++||+.
T Consensus       122 ~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~  201 (322)
T d1s9ja_         122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY  201 (322)
T ss_dssp             HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence                                      11111     112456899999999999999999998          9999999


Q ss_pred             CCCC
Q 048710          145 PICL  148 (208)
Q Consensus       145 p~~~  148 (208)
                      ||..
T Consensus       202 Pf~~  205 (322)
T d1s9ja_         202 PIPP  205 (322)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            9974

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5e-17  Score=125.49  Aligned_cols=134  Identities=13%  Similarity=0.194  Sum_probs=86.6

Q ss_pred             CeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------------------------------------
Q 048710           66 EVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------------------------------------  105 (208)
Q Consensus        66 ~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------------------------------------  105 (208)
                      ..+++|||||++|+|.++|++.    .++|.++++++.++                                        
T Consensus        74 ~~~~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl  149 (303)
T d1vjya_          74 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             eEEEEEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEE
Confidence            3689999999999999999864    58999998888877                                        


Q ss_pred             -CCC---------C--ccccccccCCcCccCccccccCC------CCcce----------eEecCCCCCCCCCccCCc--
Q 048710          106 -LAD---------Q--TYMTTQVQGTFGYLDLQYFQSSP------FTEKS----------NLLTKEKPICLTTYEENK--  155 (208)
Q Consensus       106 -~~~---------~--~~~~~~~~gt~~y~aPE~~~~~~------~~~ks----------E~~tg~~p~~~~~~~~~~--  155 (208)
                       +-+         .  ........||++|||||++....      ++.++          |++||..|+.........  
T Consensus       150 ~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~  229 (303)
T d1vjya_         150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY  229 (303)
T ss_dssp             CCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred             EecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchh
Confidence             000         0  01123567999999999987542      44555          999998877532211111  


Q ss_pred             ------cHHHHHHHHHhcCcccccccccccccC-cHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          156 ------SLTTYFLRAMKEDRLFEIFDGLVLKEG-GKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       156 ------~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                            .....+......+.    ++|.+.... +.+.+..+.+|+.+||+.+ .+||||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~  285 (303)
T d1vjya_         230 DLVPSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA  285 (303)
T ss_dssp             TTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCH
T ss_pred             hcccccchHHHHHHHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCH
Confidence                  11222333332222    233333222 2356677889999999999 999996

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.6e-16  Score=121.46  Aligned_cols=141  Identities=14%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHh-hcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------
Q 048710           47 KVNKLINEVVILS-QIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~-~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------  105 (208)
                      ....+..|..++. .++           .+.+..|+||||+++|+|.++|....   .++..+...++.+|         
T Consensus        45 ~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~  121 (320)
T d1xjda_          45 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHS  121 (320)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence            3456788888776 455           78889999999999999999998654   46777777777666         


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEecCCC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~  144 (208)
                                                     ............||+.|+|||++.+..++.++          |++||+.
T Consensus       122 ~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~  201 (320)
T d1xjda_         122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS  201 (320)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCC
Confidence                                           01112223456799999999999999999988          9999999


Q ss_pred             CCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          145 PICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       145 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||.....       ..+......+..      .++...+    ..+.++..+||+.+ ++|||+
T Consensus       202 PF~~~~~-------~~~~~~i~~~~~------~~p~~~s----~~~~dli~~~L~~dP~~R~s~  248 (320)
T d1xjda_         202 PFHGQDE-------EELFHSIRMDNP------FYPRWLE----KEAKDLLVKLFVREPEKRLGV  248 (320)
T ss_dssp             SSCCSSH-------HHHHHHHHHCCC------CCCTTSC----HHHHHHHHHHSCSSGGGSBTT
T ss_pred             CCCCCCH-------HHHHHHHHcCCC------CCCccCC----HHHHHHHHHhcccCCCCCcCH
Confidence            9974321       112222222221      1111222    34567777999999 999986

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=6.4e-16  Score=119.80  Aligned_cols=139  Identities=12%  Similarity=0.209  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.+|++++           .+.+..|+||||++||+|..++....   .+++.....++.++          
T Consensus        47 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~  123 (316)
T d1fota_          47 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK  123 (316)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccc---cccccHHHHHHHHHHHhhhhhccC
Confidence            3567999999999999           77899999999999999999998754   36666665555555          


Q ss_pred             -----------------------CCC----CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 -----------------------LAD----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 -----------------------~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                             +-+    .........||+.|||||++.+..++.++          |++||+.||..
T Consensus       124 ~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~  203 (316)
T d1fota_         124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD  203 (316)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC
Confidence                                   000    01123457799999999999999999888          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      ..      ...... ....+..      .++...+    ..+.++..+||+.+ .+||
T Consensus       204 ~~------~~~~~~-~i~~~~~------~~p~~~s----~~~~~li~~~L~~dp~~R~  244 (316)
T d1fota_         204 SN------TMKTYE-KILNAEL------RFPPFFN----EDVKDLLSRLITRDLSQRL  244 (316)
T ss_dssp             SS------HHHHHH-HHHHCCC------CCCTTSC----HHHHHHHHHHTCSCTTTCT
T ss_pred             cC------HHHHHH-HHHcCCC------CCCCCCC----HHHHHHHHHHhhhCHHhcc
Confidence            32      112222 2222221      1111122    24557777999999 9997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.59  E-value=3.9e-16  Score=118.86  Aligned_cols=144  Identities=19%  Similarity=0.266  Sum_probs=99.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.|.+|+.+|.+++            .+++..|||||||++|+|.++|....   .+++.+...++.|+          
T Consensus        53 ~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~  129 (277)
T d1phka_          53 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL  129 (277)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHc
Confidence            357999999999986            88899999999999999999998644   58999998888888          


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccC------CCCcce----------eEe
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSS------PFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~ks----------E~~  140 (208)
                                                   ..+.........||..|+|||++.+.      .++.++          |++
T Consensus       130 ~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml  209 (277)
T d1phka_         130 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  209 (277)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             CCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc
Confidence                                         01112223456799999999998642      345555          999


Q ss_pred             cCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          141 TKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       141 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      ||+.||....      ... +......+... ...+ ...    .....+.++..+||+.+ ++|||+
T Consensus       210 ~g~~Pf~~~~------~~~-~~~~i~~~~~~-~~~~-~~~----~~s~~~~~li~~~L~~~p~~R~s~  264 (277)
T d1phka_         210 AGSPPFWHRK------QML-MLRMIMSGNYQ-FGSP-EWD----DYSDTVKDLVSRFLVVQPQKRYTA  264 (277)
T ss_dssp             HSSCSSCCSS------HHH-HHHHHHHTCCC-CCTT-TGG----GSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             cCCCCCCCCC------HHH-HHHHHHhCCCC-CCCc-ccc----cCCHHHHHHHHHHccCChhHCcCH
Confidence            9999998432      111 22222233211 0011 111    12235667788999999 999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.56  E-value=2.9e-15  Score=118.22  Aligned_cols=139  Identities=10%  Similarity=0.073  Sum_probs=91.1

Q ss_pred             HHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC---------------
Q 048710           52 INEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS---------------  105 (208)
Q Consensus        52 ~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i---------------  105 (208)
                      ..|+.++..++           .+.+..||||||+++|+|.++|.+..   .+++.....++.++               
T Consensus        55 ~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~~iiHr  131 (364)
T d1omwa3          55 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYR  131 (364)
T ss_dssp             HHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHCCccce
Confidence            34466666554           67788999999999999999998654   46777777666666               


Q ss_pred             ------------------CCC-----CccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCCCCCCc
Q 048710          106 ------------------LAD-----QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPICLTTY  151 (208)
Q Consensus       106 ------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~~~~~~  151 (208)
                                        +-+     .........||+.|||||++.+ ..++.++          ||+||+.||.....
T Consensus       132 DlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~  211 (364)
T d1omwa3         132 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT  211 (364)
T ss_dssp             CCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS
T ss_pred             eeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH
Confidence                              000     1112345679999999999975 5688888          99999999974322


Q ss_pred             cCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          152 EENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       152 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      .   ... .+........      +.+....+    ..+.+++.+||+.+ .+|||+
T Consensus       212 ~---~~~-~~~~~~~~~~------~~~~~~~s----~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         212 K---DKH-EIDRMTLTMA------VELPDSFS----PELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             S---CHH-HHHHHSSSCC------CCCCSSSC----HHHHHHHHHHTCSSTTTSTTT
T ss_pred             H---HHH-HHHHhcccCC------CCCCCCCC----HHHHHHHHHHcccCHHHhCCC
Confidence            1   111 1111111111      11111222    24567777999999 999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.2e-14  Score=112.84  Aligned_cols=145  Identities=17%  Similarity=0.150  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...+.+|+++|.+++           .+.+..|||||||++|+|.++|.....  .+++.+...++.++           
T Consensus        45 ~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~~~  122 (321)
T d1tkia_          45 QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            456889999999998           678899999999999999999986543  48888888777777           


Q ss_pred             -------------C-----------------CCCccccccccCCcCccCccccccCCCCcce----------eEecCCCC
Q 048710          106 -------------L-----------------ADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -------------~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p  145 (208)
                                   .                 ...........||+.|+|||...+..++.++          |++||+.|
T Consensus       123 iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~P  202 (321)
T d1tkia_         123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP  202 (321)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCC
Confidence                         0                 0011112345689999999999999999888          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |....      ..+.... ...+...  ++.......    ...+.++...|++.| ++|||+
T Consensus       203 f~~~~------~~~~~~~-i~~~~~~--~~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~  252 (321)
T d1tkia_         203 FLAET------NQQIIEN-IMNAEYT--FDEEAFKEI----SIEAMDFVDRLLVKERKSRMTA  252 (321)
T ss_dssp             TCCSS------HHHHHHH-HHHTCCC--CCHHHHTTS----CHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCC------HHHHHHH-HHhCCCC--CChhhccCC----CHHHHHHHHHHccCChhHCcCH
Confidence            97432      1121222 2222110  111111112    224567777999999 999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=9.8e-15  Score=112.13  Aligned_cols=147  Identities=12%  Similarity=0.073  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           49 NKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      .+|..|++++.+++            .+.+..++||||+ +|+|.+.+.....  .+++.....++.++           
T Consensus        47 ~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  123 (299)
T d1ckia_          47 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKN  123 (299)
T ss_dssp             CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            46889999999987            6778899999999 5667666655443  58899888888887           


Q ss_pred             ---------------------------------CCCC------ccccccccCCcCccCccccccCCCCcce---------
Q 048710          106 ---------------------------------LADQ------TYMTTQVQGTFGYLDLQYFQSSPFTEKS---------  137 (208)
Q Consensus       106 ---------------------------------~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~ks---------  137 (208)
                                                       ....      ........||+.|||||.+.+..++.++         
T Consensus       124 iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l  203 (299)
T d1ckia_         124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  203 (299)
T ss_dssp             EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH
T ss_pred             eeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHH
Confidence                                             0000      0112345799999999999999999988         


Q ss_pred             -eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 -NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 -E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                       |++||+.||.......................     .+.+...+    +..+.+++..||+.+ ++||++
T Consensus       204 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----p~~~~~li~~cl~~~p~~RP~~  266 (299)
T d1ckia_         204 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-----IEVLCKGY----PSEFATYLNFCRSLRFDDKPDY  266 (299)
T ss_dssp             HHHHHSSCTTCCCC-------HHHHHHHHHHSC-----HHHHTTTS----CHHHHHHHHHHHHSCTTCCCCH
T ss_pred             HHHHhCCCcccccchHHHHHHHHHhhcccCCCC-----hhHhccCC----CHHHHHHHHHHccCChhHCcCH
Confidence             99999999975432222111111111110110     11111122    235677888999999 999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.8e-14  Score=113.03  Aligned_cols=139  Identities=13%  Similarity=0.144  Sum_probs=99.3

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.+.+|+++|.+++           ...+..++|+||+++|+|.+++.+..   .+++.....++.++          
T Consensus        84 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~  160 (350)
T d1rdqe_          84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467999999999998           77788999999999999999998654   48888887777777          


Q ss_pred             -----------------------CCC----CccccccccCCcCccCccccccCCCCcce----------eEecCCCCCCC
Q 048710          106 -----------------------LAD----QTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICL  148 (208)
Q Consensus       106 -----------------------~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~  148 (208)
                                             +-+    .........||+.|||||++.+..++.++          |++||+.||..
T Consensus       161 ~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  240 (350)
T d1rdqe_         161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC
Confidence                                   000    11122356799999999999999999888          99999999974


Q ss_pred             CCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCC
Q 048710          149 TTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKP  205 (208)
Q Consensus       149 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RP  205 (208)
                      ..      ... +......+..      ......+    ..+.++..+||+.+ .+|+
T Consensus       241 ~~------~~~-~~~~i~~~~~------~~p~~~s----~~~~~li~~~L~~dP~kR~  281 (350)
T d1rdqe_         241 DQ------PIQ-IYEKIVSGKV------RFPSHFS----SDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             SS------HHH-HHHHHHHCCC------CCCTTCC----HHHHHHHHHHSCSCTTTCT
T ss_pred             cC------HHH-HHHHHhcCCC------CCCccCC----HHHHHHHHHHhhhCHHhcc
Confidence            21      122 2222222221      1111222    34567777999999 9995

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.48  E-value=2.3e-14  Score=109.80  Aligned_cols=146  Identities=12%  Similarity=0.043  Sum_probs=95.7

Q ss_pred             HHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           50 KLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      ++.+|++.+..++            ...+..++||||+ +|+|.++++....  .+++.....++.++            
T Consensus        46 ~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~--~~~~~~~~~i~~q~~~~l~~lH~~gi  122 (293)
T d1csna_          46 QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKSL  122 (293)
T ss_dssp             CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhcc--chhhHHHHHHHHHHHHHHHHHHHCCc
Confidence            4566677776665            6688899999998 7999999976554  58888888888877            


Q ss_pred             ------------CC--------------C--------------CccccccccCCcCccCccccccCCCCcce--------
Q 048710          106 ------------LA--------------D--------------QTYMTTQVQGTFGYLDLQYFQSSPFTEKS--------  137 (208)
Q Consensus       106 ------------~~--------------~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ks--------  137 (208)
                                  ..              +              .........||+.|||||.+.+..++.++        
T Consensus       123 iHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~  202 (293)
T d1csna_         123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  202 (293)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             eeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHH
Confidence                        00              0              00112345699999999999999999988        


Q ss_pred             --eEecCCCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          138 --NLLTKEKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       138 --E~~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                        |++||+.||..............+.........     +.+....|    ..+.+++..||+.+ ++||+.
T Consensus       203 l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-----~~l~~~~p----~~l~~ii~~~~~~~~~~rP~y  266 (293)
T d1csna_         203 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-----RELCAGFP----EEFYKYMHYARNLAFDATPDY  266 (293)
T ss_dssp             HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-----HHHTTTSC----HHHHHHHHHHHHCCTTCCCCH
T ss_pred             HHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh-----HHhcCCCC----HHHHHHHHHHhcCCcccCcCH
Confidence              999999999743222111111111111111111     11112223    34667778999999 999973

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.1e-13  Score=106.29  Aligned_cols=97  Identities=11%  Similarity=0.067  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC------------
Q 048710           49 NKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS------------  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i------------  105 (208)
                      +.|.+|+.+|.+++           .+.+..|+||||+++|++...+....   .+++.....++.++            
T Consensus        45 ~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~i  121 (299)
T d1ua2a_          45 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQHWI  121 (299)
T ss_dssp             THHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCS---SCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhccc---CCCHHHHHHHHHHHHHHHHHhhccce
Confidence            46899999999998           77788999999999998877765433   46666666666655            


Q ss_pred             ----------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------eEecCCCCC
Q 048710          106 ----------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEKPI  146 (208)
Q Consensus       106 ----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~p~  146 (208)
                                                  ............||+.|+|||.+.+ ..++.++          |++||..||
T Consensus       122 iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf  201 (299)
T d1ua2a_         122 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  201 (299)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCC
Confidence                                        0111112234578999999999875 4568887          999999998


Q ss_pred             CC
Q 048710          147 CL  148 (208)
Q Consensus       147 ~~  148 (208)
                      ..
T Consensus       202 ~~  203 (299)
T d1ua2a_         202 PG  203 (299)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.6e-13  Score=103.45  Aligned_cols=99  Identities=14%  Similarity=0.132  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHhhcc-------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           49 NKLINEVVILSQIN-------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        49 ~~f~~E~~~l~~l~-------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ..+.+|+.+|..++                   ......++++||+++|++.........  .+++.....++.++    
T Consensus        52 ~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~qi~~aL  129 (305)
T d1blxa_          52 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGL  129 (305)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTT--CSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCC--CCCHHHHHHHHHHHHHHH
Confidence            35678888887763                   134568999999999888766554433  57888777777777    


Q ss_pred             -----------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------eEe
Q 048710          106 -----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------NLL  140 (208)
Q Consensus       106 -----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E~~  140 (208)
                                                         ............||+.|+|||++.+..++.++          |++
T Consensus       130 ~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell  209 (305)
T d1blxa_         130 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  209 (305)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHH
Confidence                                               11112223467799999999999999999998          999


Q ss_pred             cCCCCCCCC
Q 048710          141 TKEKPICLT  149 (208)
Q Consensus       141 tg~~p~~~~  149 (208)
                      ||+.||...
T Consensus       210 ~g~~pf~~~  218 (305)
T d1blxa_         210 RRKPLFRGS  218 (305)
T ss_dssp             HSSCSCCCS
T ss_pred             HCCCCCCCC
Confidence            999999743

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.2e-14  Score=106.75  Aligned_cols=132  Identities=15%  Similarity=0.302  Sum_probs=92.0

Q ss_pred             HHHHHHHHHhhcc-------------cCCCeEEEEEeeCCC-CChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           50 KLINEVVILSQIN-------------LETEVLLLVYEFISN-GTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        50 ~f~~E~~~l~~l~-------------~~~~~~~lv~ey~~~-GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.+|+.+|.+++             .+.+..++||||+.+ +++.+++....   .+++.....++.++          
T Consensus        53 ~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~~  129 (273)
T d1xwsa_          53 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC  129 (273)
T ss_dssp             EEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4778999998875             777899999999986 68888887643   58888888787777          


Q ss_pred             ------------------------CCC-----CccccccccCCcCccCccccccCCCC-cce----------eEecCCCC
Q 048710          106 ------------------------LAD-----QTYMTTQVQGTFGYLDLQYFQSSPFT-EKS----------NLLTKEKP  145 (208)
Q Consensus       106 ------------------------~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~-~ks----------E~~tg~~p  145 (208)
                                              +-+     .........||+.|+|||++.+..+. .++          |++||+.|
T Consensus       130 ~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~P  209 (273)
T d1xwsa_         130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP  209 (273)
T ss_dssp             TEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCC
Confidence                                    000     11123456799999999999877664 444          99999999


Q ss_pred             CCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          146 ICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      |...             +....+..  .+.    ...+    ..+.++..+||+.+ ++|||+
T Consensus       210 f~~~-------------~~i~~~~~--~~~----~~~s----~~~~~li~~~L~~dp~~R~s~  249 (273)
T d1xwsa_         210 FEHD-------------EEIIRGQV--FFR----QRVS----SECQHLIRWCLALRPSDRPTF  249 (273)
T ss_dssp             CCSH-------------HHHHHCCC--CCS----SCCC----HHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCc-------------hHHhhccc--CCC----CCCC----HHHHHHHHHHccCCHhHCcCH
Confidence            8731             01112211  111    1222    34567777999999 999985

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.5e-12  Score=98.48  Aligned_cols=99  Identities=14%  Similarity=0.138  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----------
Q 048710           48 VNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----------  105 (208)
                      ...|.+|+++|.+++           .+.+..|+||||+.++.+.........  .+++.....++.++           
T Consensus        45 ~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~--~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT--GIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             CHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCchhhhhhhhccc--CCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            467999999999998           778899999999986544433333333  58999988888888           


Q ss_pred             -----------------------------CCCCccccccccCCcCccCccccccCCC-Ccce----------eEecCCCC
Q 048710          106 -----------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPF-TEKS----------NLLTKEKP  145 (208)
Q Consensus       106 -----------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ks----------E~~tg~~p  145 (208)
                                                   ............||+.|+|||......+ +.++          |++||+.|
T Consensus       123 IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~P  202 (298)
T d1gz8a_         123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL  202 (298)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCC
Confidence                                         0111122334579999999999876654 5555          99999999


Q ss_pred             CCC
Q 048710          146 ICL  148 (208)
Q Consensus       146 ~~~  148 (208)
                      |..
T Consensus       203 f~~  205 (298)
T d1gz8a_         203 FPG  205 (298)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.3e-13  Score=102.96  Aligned_cols=144  Identities=17%  Similarity=0.210  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhcc------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           48 VNKLINEVVILSQIN------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        48 ~~~f~~E~~~l~~l~------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      .+.|.+|+++|.+++            .+.+..++|+||+.+|+|.+++.....   +.......++.++          
T Consensus        72 ~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~---~~e~~~~~~~~Qi~~al~~lH~~  148 (322)
T d1vzoa_          72 TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKL  148 (322)
T ss_dssp             GGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHhhcC
Confidence            456889999999997            678899999999999999999986543   3444444444444          


Q ss_pred             -------------------------------CCCCccccccccCCcCccCccccccC--CCCcce----------eEecC
Q 048710          106 -------------------------------LADQTYMTTQVQGTFGYLDLQYFQSS--PFTEKS----------NLLTK  142 (208)
Q Consensus       106 -------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ks----------E~~tg  142 (208)
                                                     ............||+.|++||.+.+.  .++.++          |++||
T Consensus       149 ~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG  228 (322)
T d1vzoa_         149 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG  228 (322)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHS
T ss_pred             CEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhC
Confidence                                           11112223456789999999999764  456676          99999


Q ss_pred             CCCCCCCCccCCccHHHHHHHHHhcCcccccccccccccCcHHHHHHHHHHHHHhhcCC-CCCCCC
Q 048710          143 EKPICLTTYEENKSLTTYFLRAMKEDRLFEIFDGLVLKEGGKDEIVVVVKLKKRCLNLN-EKKPTM  207 (208)
Q Consensus       143 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C~~~~-~~RPsm  207 (208)
                      +.||.....   ......+.........      .+    +......+.++..+||+.+ .+|||+
T Consensus       229 ~~PF~~~~~---~~~~~~i~~~~~~~~~------~~----~~~~s~~~~~li~~~l~~dP~~R~s~  281 (322)
T d1vzoa_         229 ASPFTVDGE---KNSQAEISRRILKSEP------PY----PQEMSALAKDLIQRLLMKDPKKRLGC  281 (322)
T ss_dssp             SCTTSCTTS---CCCHHHHHHHHHHCCC------CC----CTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCCCCCH---HHHHHHHHHhcccCCC------CC----cccCCHHHHHHHHHHcccCHHHcCCC
Confidence            999975432   2222323322222211      11    1122345667777999999 999974

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.5e-12  Score=97.74  Aligned_cols=98  Identities=15%  Similarity=0.155  Sum_probs=68.9

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--
Q 048710           45 EGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--  105 (208)
                      +.....+.+|+.+|.+++                 ...+..|+||||+.+|.+. .++.     .+++.....++.++  
T Consensus        57 ~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~-~~~~-----~~~~~~i~~~~~qil~  130 (355)
T d2b1pa1          57 QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-VIQM-----ELDHERMSYLLYQMLC  130 (355)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH-HHTS-----CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHH-hhhc-----CCCHHHHHHHHHHHHH
Confidence            445567999999999998                 1457899999999766554 4432     47788777777777  


Q ss_pred             -------------------------------------CCCCccccccccCCcCccCccccccCCCCcce----------e
Q 048710          106 -------------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSPFTEKS----------N  138 (208)
Q Consensus       106 -------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks----------E  138 (208)
                                                           ............||..|+|||++.+..+++++          |
T Consensus       131 gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~e  210 (355)
T d2b1pa1         131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  210 (355)
T ss_dssp             HHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             HHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHH
Confidence                                                 00111122455689999999999998899888          9


Q ss_pred             EecCCCCCCC
Q 048710          139 LLTKEKPICL  148 (208)
Q Consensus       139 ~~tg~~p~~~  148 (208)
                      +++|+.||..
T Consensus       211 ll~g~~pF~~  220 (355)
T d2b1pa1         211 MVRHKILFPG  220 (355)
T ss_dssp             HHHSSCSSCC
T ss_pred             HhhCCCCCCC
Confidence            9999999973

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.6e-12  Score=100.33  Aligned_cols=100  Identities=13%  Similarity=0.042  Sum_probs=69.6

Q ss_pred             hhHHHHHHHHHHHhhcc-------------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-
Q 048710           46 GKVNKLINEVVILSQIN-------------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-  105 (208)
                      ....++.+|+.+|.+++                   ...+..++||||+++|.+........   .++......++.++ 
T Consensus        51 ~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~---~~~~~~~~~i~~qil  127 (318)
T d3blha1          51 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLL  127 (318)
T ss_dssp             SSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTC---CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccc---ccccHHHHHHHHHHH
Confidence            34567899999999999                   22456899999999888776655433   46666666666666 


Q ss_pred             --------------------------------CCC-----------CccccccccCCcCccCccccccC-CCCcce----
Q 048710          106 --------------------------------LAD-----------QTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----  137 (208)
Q Consensus       106 --------------------------------~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----  137 (208)
                                                      .-+           .........||+.|+|||.+.+. .++.++    
T Consensus       128 ~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwS  207 (318)
T d3blha1         128 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG  207 (318)
T ss_dssp             HHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHH
T ss_pred             HHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHccc
Confidence                                            000           01112235689999999998764 678887    


Q ss_pred             ------eEecCCCCCCC
Q 048710          138 ------NLLTKEKPICL  148 (208)
Q Consensus       138 ------E~~tg~~p~~~  148 (208)
                            |++||+.||..
T Consensus       208 lGvil~el~~g~~pf~~  224 (318)
T d3blha1         208 AGCIMAEMWTRSPIMQG  224 (318)
T ss_dssp             HHHHHHHHHHSSCSCCC
T ss_pred             CCceeeeHhhCCCCCCC
Confidence                  99999999974

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.18  E-value=9.4e-12  Score=94.56  Aligned_cols=99  Identities=11%  Similarity=0.072  Sum_probs=73.2

Q ss_pred             hHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----------
Q 048710           47 KVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----------  105 (208)
Q Consensus        47 ~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----------  105 (208)
                      ..+.|.+|+.+|.+++           .+.+..++++||+.++.+..+.....   .++......++.++          
T Consensus        43 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          43 IPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             CCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcC---CcchhhhHHHHHHHHHHHHHhccC
Confidence            3578999999999998           78888999999999887777766543   58888888888877          


Q ss_pred             ------------------------------CCCCccccccccCCcCccCcccccc-CCCCcce----------eEecCCC
Q 048710          106 ------------------------------LADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTKEK  144 (208)
Q Consensus       106 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg~~  144 (208)
                                                    ............||+.|+|||.+.+ ..++.++          |++||+.
T Consensus       120 ~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~  199 (286)
T d1ob3a_         120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP  199 (286)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCC
Confidence                                          0011112234468999999999875 4557777          9999999


Q ss_pred             CCCC
Q 048710          145 PICL  148 (208)
Q Consensus       145 p~~~  148 (208)
                      ||..
T Consensus       200 pf~~  203 (286)
T d1ob3a_         200 LFPG  203 (286)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3.4e-11  Score=93.89  Aligned_cols=99  Identities=12%  Similarity=0.071  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--
Q 048710           45 EGKVNKLINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--  105 (208)
                      +...+.+.+|+++|.+++                 ......|+||||+ +++|..++++.    .+++.....++.++  
T Consensus        58 ~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~~~~qi~~  132 (346)
T d1cm8a_          58 ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLK  132 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHhc----cccHHHHHHHHHHHHH
Confidence            344568999999999998                 1233579999999 67788877653    48888888888877  


Q ss_pred             -------------------------------C----CCCccccccccCCcCccCccccccC-CCCcce----------eE
Q 048710          106 -------------------------------L----ADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NL  139 (208)
Q Consensus       106 -------------------------------~----~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~  139 (208)
                                                     +    .......+...||+.|+|||.+.+. .++.++          |+
T Consensus       133 aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el  212 (346)
T d1cm8a_         133 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM  212 (346)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHH
Confidence                                           0    0011123457799999999998764 456666          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      +||+.||..
T Consensus       213 l~g~~pf~~  221 (346)
T d1cm8a_         213 ITGKTLFKG  221 (346)
T ss_dssp             HHSSCSSCC
T ss_pred             HHCcCCCCC
Confidence            999999974

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=9.6e-12  Score=97.25  Aligned_cols=98  Identities=9%  Similarity=-0.010  Sum_probs=67.8

Q ss_pred             HHHHHHHHhhcc-----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           51 LINEVVILSQIN-----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        51 f~~E~~~l~~l~-----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +.+|+.+|.+++                 .+....+|||||+++|.+....+.......+++.+...++.++        
T Consensus        60 ~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH  139 (350)
T d1q5ka_          60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH  139 (350)
T ss_dssp             CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            457999999998                 2334578999999977555444322122268898887777777        


Q ss_pred             --------------------------C------CCCccccccccCCcCccCcccccc-CCCCcce----------eEecC
Q 048710          106 --------------------------L------ADQTYMTTQVQGTFGYLDLQYFQS-SPFTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------------------~------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks----------E~~tg  142 (208)
                                                +      ...........||..|+|||.+.+ ..++.++          |++||
T Consensus       140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g  219 (350)
T d1q5ka_         140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG  219 (350)
T ss_dssp             TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHT
T ss_pred             hcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhC
Confidence                                      0      001112234678999999998865 4678887          99999


Q ss_pred             CCCCCC
Q 048710          143 EKPICL  148 (208)
Q Consensus       143 ~~p~~~  148 (208)
                      +.||..
T Consensus       220 ~~pf~~  225 (350)
T d1q5ka_         220 QPIFPG  225 (350)
T ss_dssp             SCSSCC
T ss_pred             CCCCCC
Confidence            999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=9.3e-11  Score=91.35  Aligned_cols=100  Identities=12%  Similarity=0.103  Sum_probs=71.4

Q ss_pred             hhHHHHHHHHHHHhhcc-----------c----CCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           46 GKVNKLINEVVILSQIN-----------L----ETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~-----------~----~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ...+.|.+|+.+|.+++           .    .....+++++|+.+|+|.+++...    .+++.....++.++     
T Consensus        48 ~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~  123 (345)
T d1pmea_          48 TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLK  123 (345)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHH
Confidence            33568999999999998           1    112235556778899999999754    48888888888877     


Q ss_pred             ----------------------------CCC----------CccccccccCCcCccCcccccc-CCCCcce---------
Q 048710          106 ----------------------------LAD----------QTYMTTQVQGTFGYLDLQYFQS-SPFTEKS---------  137 (208)
Q Consensus       106 ----------------------------~~~----------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ks---------  137 (208)
                                                  +-+          .........||+.|+|||.+.. ..++.++         
T Consensus       124 yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il  203 (345)
T d1pmea_         124 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  203 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHH
T ss_pred             HHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCcee
Confidence                                        000          0111245668999999999854 4556666         


Q ss_pred             -eEecCCCCCCCC
Q 048710          138 -NLLTKEKPICLT  149 (208)
Q Consensus       138 -E~~tg~~p~~~~  149 (208)
                       |++||+.||...
T Consensus       204 ~eml~g~~pf~~~  216 (345)
T d1pmea_         204 AEMLSNRPIFPGK  216 (345)
T ss_dssp             HHHHHSSCSCCCS
T ss_pred             hHHhhCCCCCCCC
Confidence             999999999743

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.11  E-value=9.6e-11  Score=90.57  Aligned_cols=98  Identities=11%  Similarity=0.087  Sum_probs=73.0

Q ss_pred             hhhHHHHHHHHHHHhhcc--------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC-----
Q 048710           45 EGKVNKLINEVVILSQIN--------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS-----  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~--------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i-----  105 (208)
                      ....+++.+|+.+|.+++              ...+..++||||+++|+|..+.+      .++......++.++     
T Consensus        70 ~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~  143 (328)
T d3bqca1          70 PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALD  143 (328)
T ss_dssp             SSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHH
Confidence            344578999999999985              34567999999999999987753      47787777777777     


Q ss_pred             -----------------------------------CCCCccccccccCCcCccCccccccC-CCCcce----------eE
Q 048710          106 -----------------------------------LADQTYMTTQVQGTFGYLDLQYFQSS-PFTEKS----------NL  139 (208)
Q Consensus       106 -----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ks----------E~  139 (208)
                                                         ............||..|+|||.+.+. .++.++          |+
T Consensus       144 ~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~  223 (328)
T d3bqca1         144 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  223 (328)
T ss_dssp             HHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHh
Confidence                                               00111123455689999999998765 457666          99


Q ss_pred             ecCCCCCCC
Q 048710          140 LTKEKPICL  148 (208)
Q Consensus       140 ~tg~~p~~~  148 (208)
                      ++|+.|+..
T Consensus       224 ~~g~~pf~~  232 (328)
T d3bqca1         224 IFRKEPFFH  232 (328)
T ss_dssp             HHTCSSSSC
T ss_pred             ccCCCCCCC
Confidence            999999874

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.4e-10  Score=88.96  Aligned_cols=99  Identities=11%  Similarity=0.053  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHHHHhhcc----------------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC----
Q 048710           46 GKVNKLINEVVILSQIN----------------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS----  105 (208)
Q Consensus        46 ~~~~~f~~E~~~l~~l~----------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i----  105 (208)
                      ...+.+.+|+++|.+++                .+....++|++|+.+|+|.++++..    .+++.....++.++    
T Consensus        59 ~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL  134 (348)
T d2gfsa1          59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGL  134 (348)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHH
Confidence            34567899999999997                1334557778899999999999753    48888887788777    


Q ss_pred             ---------------------------------CCCCccccccccCCcCccCccccccCC-CCcce----------eEec
Q 048710          106 ---------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLT  141 (208)
Q Consensus       106 ---------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~t  141 (208)
                                                       ............||..|+|||...+.. ++.++          |++|
T Consensus       135 ~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~  214 (348)
T d2gfsa1         135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT  214 (348)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHh
Confidence                                             001112234566899999999877654 46666          9999


Q ss_pred             CCCCCCC
Q 048710          142 KEKPICL  148 (208)
Q Consensus       142 g~~p~~~  148 (208)
                      |+.||..
T Consensus       215 g~~pF~~  221 (348)
T d2gfsa1         215 GRTLFPG  221 (348)
T ss_dssp             SSCSCCC
T ss_pred             CCCCCCC
Confidence            9999873

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-09  Score=82.32  Aligned_cols=100  Identities=14%  Similarity=0.201  Sum_probs=75.7

Q ss_pred             hhhHHHHHHHHHHHhhcc-----------cCCCeEEEEEeeCCCCChhhHhhcCCCCCCCCHHHHHHHHHhC--------
Q 048710           45 EGKVNKLINEVVILSQIN-----------LETEVLLLVYEFISNGTVYQYINNQNEEFPIAWEMQLHIVVDS--------  105 (208)
Q Consensus        45 ~~~~~~f~~E~~~l~~l~-----------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~l~~~~r~~i~~~i--------  105 (208)
                      +....++.+|+.+|.+++           .+.+..++|+||+.+++|..++....   .+++.....++.++        
T Consensus        42 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH  118 (292)
T d1unla_          42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCH  118 (292)
T ss_dssp             TTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccccc---ccchhHHHHHHHHHHHHHHHhh
Confidence            344678999999999998           78888999999999999999887654   46777777777777        


Q ss_pred             --------------------------------CCCCccccccccCCcCccCccccccCC-CCcce----------eEecC
Q 048710          106 --------------------------------LADQTYMTTQVQGTFGYLDLQYFQSSP-FTEKS----------NLLTK  142 (208)
Q Consensus       106 --------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~ks----------E~~tg  142 (208)
                                                      ............++..|+|||.+.... ++.++          |++||
T Consensus       119 ~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g  198 (292)
T d1unla_         119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA  198 (292)
T ss_dssp             HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTT
T ss_pred             cCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhC
Confidence                                            011111223445688999999987655 57777          99999


Q ss_pred             CCCCC
Q 048710          143 EKPIC  147 (208)
Q Consensus       143 ~~p~~  147 (208)
                      +.|+.
T Consensus       199 ~~p~~  203 (292)
T d1unla_         199 GRPLF  203 (292)
T ss_dssp             SCCSC
T ss_pred             CCCCC
Confidence            99975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=4.2e-08  Score=76.23  Aligned_cols=36  Identities=17%  Similarity=0.123  Sum_probs=29.7

Q ss_pred             ccccCCcCccCccccccCCCCcce----------eEecCCCCCCCC
Q 048710          114 TQVQGTFGYLDLQYFQSSPFTEKS----------NLLTKEKPICLT  149 (208)
Q Consensus       114 ~~~~gt~~y~aPE~~~~~~~~~ks----------E~~tg~~p~~~~  149 (208)
                      ....||+.|+|||.+.+..++.++          |++||+.||...
T Consensus       187 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~  232 (362)
T d1q8ya_         187 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD  232 (362)
T ss_dssp             CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCC
Confidence            456689999999999999999888          999999999743