Citrus Sinensis ID: 048771

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810----

MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV

ccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccCEEECccccHHHHHcccccccccEEEEEcccccccEEEEEEEEEEEccccEEEEEEEccccccccccccccccccEECcccccEEEEcccccEEEEEEEEECcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccCEccccccccEEEEEEccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHcccccccccccHHccccccccccccccccccccccCEEEEcccccccccEEEEEEEEccccccccccccccHHHHHHHccccccccccccEEEEccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccEEEEcccccccEEEcccHHHHHHHcccHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccCEEEccccccCEEccEEEEEEEcccccEEEEEEEEEccECc

*****************YVRYTPEQVEALERLYHECPK**SIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRL***VSQLVYENGYFRQ***************************************LSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQ********GWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPL*************************************CMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSP************LGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV

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MAMSCKDGKTGSLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNGYFRQHTQSTTLATKDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIVAISHGCSGVAARACGLVGLEPTRVAEILKDRPRGSAILYALTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNIQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQMAQEVTQSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWTVMGNDGMDDVTVLVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDVYSAAAIKVGPCSLPGSRVGTFGSQVILPLAHTIEHEEFMEVIKLEGVGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKETSSPNRTLDLASALEIGPAGNRATNNYSTNSTCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Homeobox-leucine zipper protein ATHB-15	Probable transcription factor involved in the regulation of meristem development to promote lateral organ formation. May regulates procambial and vascular tissue formation or maintenance, and vascular development in inflorescence stems.	confident	Q9ZU11
Homeobox-leucine zipper protein HOX32	Probable transcription factor.	probable	Q6AST1
Homeobox-leucine zipper protein ATHB-8	Probable transcription factor involved in the regulation of vascular development. May promote differentiation of precambial and cambial cells.	probable	Q39123

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PSO, chain A
Confidence level:very confident
Coverage over the Query: 161-325
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Template: 2DMU, chain A
Confidence level:very confident
Coverage over the Query: 9-77
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Template: 2R55, chain A
Confidence level:confident
Coverage over the Query: 154-346
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Template: 2PSO, chain A
Confidence level:confident
Coverage over the Query: 384-412,426-462,486-569,606-650
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Template: 3P0L, chain A
Confidence level:confident
Coverage over the Query: 365-412,425-461,485-575,598-650
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Template: 3SW1, chain A
Confidence level:probable
Coverage over the Query: 697-810
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Template: 1HJB, chain A
Confidence level:probable
Coverage over the Query: 69-123
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View the model in PyMOL