Citrus Sinensis ID: 048803

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVMALRCNTWQA
ccccccccHHHHHHHHHcccccccHHHHHccHHHHHHHccHHHHHHHHHccccccEEEEEEEEccccccccccccccccccEEEEECcccccEEEccccccccccccccCEEEEEccEEEEEEcccccccccccEEEEEEcccccCECcccccccccCEEEEEEccccEEEEEEccccccccccEEEEEEcccccEEEccccccccccccEEEEccEEEEEEccccccccccccEEEEEEcccccEEEccccccccccccccCEEEEccEEEEECccEEEEcccccEEc
MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVMALRCNTWQ*
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MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVMALRCNTWQA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
F-box/kelch-repeat protein At1g80440 probableQ9M8L2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VPJ, chain A
Confidence level:very confident
Coverage over the Query: 81-278
View the alignment between query and template
View the model in PyMOL
Template: 1ZGK, chain A
Confidence level:very confident
Coverage over the Query: 23-278
View the alignment between query and template
View the model in PyMOL
Template: 2E31, chain A
Confidence level:confident
Coverage over the Query: 22-50
View the alignment between query and template
View the model in PyMOL