Citrus Sinensis ID: 048823

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------70

MATHNLNINISGRLTRHFFTPLLFIWAAPTRAGTRTRTRVLPIRCYLRRASNFSRRFSVVPSAASASGSPEWNIDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQMCCYLTRTTKRTHQLIKDNLHETPTYGGWVEAKGPRYCPAIEDKGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCYRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIVLERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRQQSQLQQMVHQQHRPLPPDLDYYAMTTLSLESREKLSKVRPQTIGQASRVGGVSPADITALLIILEANRRKAQEQMRHQVLASVRADSNQQSEGPLTETISS

cccccCEEEECccccccccccEEEccccccccccccccccccccccEEcccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHcccccHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEccccEEEEEEEccccEEEccEEEEccccccccEEEEEcccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccEEcccccccccccccccccccccHHHHHHHHHccccccccccccccCEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEccccccEEEEEEccccccccccccccccHHHHHHHHcccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccc

***HNLNINISGRLTRHFFTPLLFIWAAPTRAGTRTRTRVLPIRCYLRRASNFSRRFS************EWNIDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQMCCYLTRTTKRTHQLIKDNLHETPTYGGWVEAKGPRYCPAIEDKGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCYRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIVLERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTVRISGGDLAADV********KDSSTLESLLKKPHIQYEILDKHGFGNGLLSRAEKQCVEIDIKYEGFIVRQQSQLQQMVHQQHRPLPPDLDYYAMTTLSLESREKLSKVRPQTIGQASRVGGVSPADITALLIILEA***********************************

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	Q317W7
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	A3PFG3
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.	probable	Q0I6D8

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CP8, chain A
Confidence level:very confident
Coverage over the Query: 76-662
View the alignment between query and template
View the model in PyMOL