Diaphorina citri psyllid: psy10248

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
MGLQLLSRSLDPYYFKYGTSTSDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIEDNVVNFKIIVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNPC
ccccccccccccccccccccccccccccccCCcEEEECccCEEECccEEEEEcccccccccEEEEEEEEECccccccEEEEEEEEEccccccccccccccccEEEEEccCEEECccEECcCEEEEcccHHHHccccccccccccccCCccccccccccccccccccccccccccEEEEcccccccccEEccccc
*********LDPYYFKYGTSTSDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIEDNVVNFKIIVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLK***
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MGLQLLSRSLDPYYFKYGTSTSDEHPVVRNCYPAMRHIQGDIIQPRDCILLKSGTRKKDLPFIAKVGALWENPEDGEMMVSLLWYYRPEHTEQGTSYRDNKDEIFASRHRDINSVACIEDKCYVLTYREYCRYRKKMRSIEDNVVNFKIIVPPLGEGQYERLLRQPPGQVSPDRVFYCHKVYDFRTKRLLKNPC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000976 [MF]transcription regulatory region sequence-specific DNA bindingprobableGO:0044212, GO:0043565, GO:0097159, GO:0003677, GO:0001067, GO:0003674, GO:0005488, GO:0003676, GO:0000975, GO:1901363

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3AV4, chain A
Confidence level:very confident
Coverage over the Query: 12-142,173-194
View the alignment between query and template
View the model in PyMOL