Diaphorina citri psyllid: psy10337


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80-------
MSHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERNS
cCEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MSHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE***
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MSHGVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIERNS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial This enzyme is specific for acyl chain lengths of 4 to 16.confidentP08503
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial This enzyme is specific for acyl chain lengths of 4 to 16.confidentA5A6I0
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial This enzyme is specific for acyl chain lengths of 4 to 16.confidentP11310

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionconfidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0016853 [MF]isomerase activityprobableGO:0003824, GO:0003674
GO:0070991 [MF]medium-chain-acyl-CoA dehydrogenase activityprobableGO:0003995, GO:0003824, GO:0016627, GO:0003674, GO:0016491
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0000062 [MF]fatty-acyl-CoA bindingprobableGO:0043168, GO:0050662, GO:0043167, GO:0003674, GO:0005488, GO:0048037
GO:0042802 [MF]identical protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0051289 [BP]protein homotetramerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051260, GO:0051262, GO:0065003, GO:0044085, GO:0008150, GO:0016043, GO:0071840
GO:0030424 [CC]axonprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0051793 [BP]medium-chain fatty acid catabolic processprobableGO:0006631, GO:0019752, GO:0044248, GO:0009062, GO:0044281, GO:0044282, GO:0044242, GO:0044712, GO:0044710, GO:0016042, GO:0071704, GO:0051791, GO:0006629, GO:0009987, GO:1901575, GO:0032787, GO:0008150, GO:0008152, GO:0072329, GO:0043436, GO:0044255, GO:0009056, GO:0044238, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0031966 [CC]mitochondrial membraneprobableGO:0005737, GO:0005575, GO:0031090, GO:0043229, GO:0016020, GO:0044464, GO:0044444, GO:0031967, GO:0031975, GO:0044446, GO:0005740, GO:0005739, GO:0044429, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005759 [CC]mitochondrial matrixprobableGO:0005737, GO:0005575, GO:0043231, GO:0043233, GO:0031974, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422
GO:0006111 [BP]regulation of gluconeogenesisprobableGO:0080090, GO:0019222, GO:0031326, GO:0031323, GO:0009889, GO:0010565, GO:0050794, GO:0010906, GO:0065007, GO:0010675, GO:0008150, GO:0043255, GO:0006109, GO:0050789
GO:0055007 [BP]cardiac muscle cell differentiationprobableGO:0030154, GO:0072359, GO:0072358, GO:0051146, GO:0061061, GO:0007275, GO:0044699, GO:0048869, GO:0008150, GO:0048513, GO:0032502, GO:0032501, GO:0009987, GO:0035051, GO:0009888, GO:0044767, GO:0044763, GO:0007507, GO:0044707, GO:0048856, GO:0014706, GO:0048738, GO:0060537, GO:0048731, GO:0042692
GO:0001889 [BP]liver developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0061008, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0042594 [BP]response to starvationprobableGO:0009991, GO:0009605, GO:0050896, GO:0031667, GO:0006950, GO:0008150
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0046688 [BP]response to copper ionprobableGO:0042221, GO:0050896, GO:0010035, GO:0008150, GO:0010038
GO:0033539 [BP]fatty acid beta-oxidation using acyl-CoA dehydrogenaseprobableGO:0034440, GO:0006631, GO:0006635, GO:0019752, GO:0044248, GO:0009062, GO:0044281, GO:0044282, GO:0044242, GO:0044712, GO:1901575, GO:0030258, GO:0016042, GO:0071704, GO:0006629, GO:0009987, GO:0044710, GO:0032787, GO:0008150, GO:0008152, GO:0072329, GO:0043436, GO:0019395, GO:0044255, GO:0009056, GO:0055114, GO:0044238, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0009791 [BP]post-embryonic developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0008150, GO:0007275, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0045329 [BP]carnitine biosynthetic processprobableGO:0019752, GO:0044249, GO:0034641, GO:0009437, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044271, GO:0006082, GO:0006577, GO:0006578, GO:0016053, GO:0044237, GO:0046394, GO:0006807, GO:1901617, GO:1901615
GO:0019254 [BP]carnitine metabolic process, CoA-linkedprobableGO:0044710, GO:0006082, GO:0006577, GO:0009987, GO:0019752, GO:0032787, GO:0071704, GO:0034641, GO:0009437, GO:0006807, GO:0044237, GO:0008152, GO:0043436, GO:0008150, GO:0044281, GO:1901615
GO:0009409 [BP]response to coldprobableGO:0009628, GO:0006950, GO:0008150, GO:0050896, GO:0009266
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0051384 [BP]response to glucocorticoid stimulusprobableGO:0009719, GO:0033993, GO:0031960, GO:0050896, GO:0008150, GO:0048545, GO:0009725, GO:0042221, GO:0010033, GO:0014070
GO:0005978 [BP]glycogen biosynthetic processprobableGO:0044249, GO:0009250, GO:0034645, GO:0006091, GO:0016051, GO:1901576, GO:0044264, GO:0044262, GO:0044260, GO:0071704, GO:0006112, GO:0006073, GO:0043170, GO:0009987, GO:0000271, GO:0044710, GO:0034637, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0044723, GO:0055114, GO:0044042, GO:0044238, GO:0005975, GO:0015980, GO:0005977, GO:0005976, GO:0044237, GO:0033692
GO:0007584 [BP]response to nutrientprobableGO:0009991, GO:0009605, GO:0050896, GO:0031667, GO:0008150, GO:0042221
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1EGD, chain A
Confidence level:very confident
Coverage over the Query: 14-86
View the alignment between query and template
View the model in PyMOL