Diaphorina citri psyllid: psy10349

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------
GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK
ccEEccccccccccEEEEEcccccccccccHHHHHHHHcccccccEEEcccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHccccccccccccHHHHHccccccccccccccccccccEEECccccccHHHHHHHHHHHHccccccccccccccCECcccccccccccccccccccccccccccccEEEcccEEEEEEECccccEEEEEEEEEccEEEEEEEccEEEECccccccHHHHHHcccccHHHHHHcccccCEccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccEEEEcccccccccccccccHHHHcccccHHHHHHHHccccccccEEEEECccccccCEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHccccccCCcccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccc
GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI*
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GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
L-sorbose 1-dehydrogenase confidentQ47944
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentQ2KB43
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentC3MIE4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042600 [CC]chorionprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0008812 [MF]choline dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016491
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044699 [BP]single-organism processprobableGO:0008150
GO:0032502 [BP]developmental processprobableGO:0008150
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0006066 [BP]alcohol metabolic processprobableGO:0044710, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:1901615

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GPE, chain A
Confidence level:very confident
Coverage over the Query: 1-517
View the alignment between query and template
View the model in PyMOL
Template: 1CF3, chain A
Confidence level:confident
Coverage over the Query: 1-284,297-517
View the alignment between query and template
View the model in PyMOL