Psyllid ID: psy10349
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | 2.2.26 [Sep-21-2011] | |||||||
| P18173 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.943 | 0.780 | 0.392 | 2e-93 | |
| P18172 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.926 | 0.766 | 0.378 | 1e-90 | |
| Q985M5 | 550 | Choline dehydrogenase OS= | no | N/A | 0.909 | 0.854 | 0.326 | 3e-63 | |
| Q47944 | 531 | L-sorbose 1-dehydrogenase | yes | N/A | 0.903 | 0.879 | 0.330 | 1e-61 | |
| A6U6Y8 | 549 | Choline dehydrogenase OS= | no | N/A | 0.901 | 0.848 | 0.321 | 5e-61 | |
| Q6UPE0 | 599 | Choline dehydrogenase, mi | yes | N/A | 0.903 | 0.779 | 0.314 | 6e-61 | |
| Q8NE62 | 594 | Choline dehydrogenase, mi | yes | N/A | 0.912 | 0.794 | 0.323 | 2e-60 | |
| P54223 | 549 | Choline dehydrogenase OS= | yes | N/A | 0.901 | 0.848 | 0.320 | 4e-60 | |
| C3MIE4 | 549 | Choline dehydrogenase OS= | yes | N/A | 0.912 | 0.859 | 0.314 | 6e-60 | |
| B9JBA2 | 549 | Choline dehydrogenase OS= | yes | N/A | 0.903 | 0.850 | 0.319 | 6e-60 |
| >sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld PE=3 SV=3 | Back alignment and function desciption |
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Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 293/525 (55%), Gaps = 37/525 (7%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQF--TKFNWNFTTEFQPGACRG 58
G VV +RL+E P WKVLL+EAG +E IP + +L F + ++ + TE +P AC
Sbjct: 76 GSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP--SMFLNFIGSDIDYRYNTEPEPMACLS 133
Query: 59 LNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSED-I 117
+RC WP G+ +GG SV+N +Y RGN D+D W GN GW Y DVLP+FKKSED +
Sbjct: 134 SMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNL 193
Query: 118 DVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQG 177
D+ E+ +EYH GG L V PY L A L++ E+G ++ D N + + GF Q
Sbjct: 194 DLDEVG-TEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQN-STGFMIAQM 251
Query: 178 TIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN-NKKRVVY 236
T + G R+S+++AFLRP R N H++ K+LI P+TK V GVE R +
Sbjct: 252 TARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKIL 311
Query: 237 AKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGENLQEHPAFASLAFTV 295
KKEVVLSAGA SPH+LLLSG+GP+++L+Q N+ + +L VG+NL H + + F
Sbjct: 312 VKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFID 371
Query: 296 NQKVGLVSDRIFSNLAKETIKAFTNQGWTTTLGCEGL-GYVRTKYNNYPPGVPDIEYIFV 354
+ +D N A G + G + + T+Y + P PD++ F
Sbjct: 372 D------ADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKLATRYADSPE-RPDLQLYF- 423
Query: 355 PASLAIEEEKGGSLLRKTMGIPDRTFK--ELFRDVKNKDAWSIWPMLMYPESRGYVRLKS 412
GG L RT + EL + N + I+P ++ P SRG++ L+S
Sbjct: 424 ----------GGYLASCA-----RTGQVGELLSN--NSRSIQIFPAVLNPRSRGFIGLRS 466
Query: 413 ADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYG 472
ADP+ P + +N+ D+ +VEGIK VI LS+T ++Y +L ++ C+ H +G
Sbjct: 467 ADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFG 526
Query: 473 SDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
SD YW C VRQ T +HQ G+CKMGP D AVV+ LRVHGI+
Sbjct: 527 SDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIR 571
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Essential for cuticular modification during development. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 1EC: .EC: 9EC: 9EC: .EC: 1EC: 0 |
| >sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura pseudoobscura GN=Gld PE=3 SV=4 | Back alignment and function description |
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| >sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1 | Back alignment and function description |
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| >sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2 SV=2 | Back alignment and function description |
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| >sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA PE=3 SV=2 | Back alignment and function description |
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| >sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | ||||||
| 193620141 | 623 | PREDICTED: glucose dehydrogenase [accept | 0.994 | 0.825 | 0.606 | 0.0 | |
| 328705618 | 623 | PREDICTED: glucose dehydrogenase [accept | 0.988 | 0.820 | 0.569 | 1e-172 | |
| 242018470 | 624 | glucose dehydrogenase precursor, putativ | 0.994 | 0.823 | 0.483 | 1e-140 | |
| 357631699 | 1227 | glucose dehydrogenase [Danaus plexippus] | 0.990 | 0.417 | 0.471 | 1e-138 | |
| 322796401 | 624 | hypothetical protein SINV_00375 [Solenop | 0.988 | 0.818 | 0.454 | 1e-136 | |
| 332023084 | 634 | Glucose dehydrogenase [Acromyrmex echina | 0.988 | 0.805 | 0.450 | 1e-136 | |
| 242018476 | 630 | glucose dehydrogenase precursor, putativ | 0.990 | 0.812 | 0.436 | 1e-136 | |
| 307206069 | 618 | Glucose dehydrogenase [acceptor] [Harpeg | 0.986 | 0.825 | 0.461 | 1e-135 | |
| 195396657 | 666 | GJ16803 [Drosophila virilis] gi|19414671 | 0.990 | 0.768 | 0.457 | 1e-134 | |
| 195043459 | 681 | GH11960 [Drosophila grimshawi] gi|193901 | 0.990 | 0.751 | 0.455 | 1e-134 |
| >gi|193620141|ref|XP_001952665.1| PREDICTED: glucose dehydrogenase [acceptor]-like isoform 1 [Acyrthosiphon pisum] gi|328705616|ref|XP_003242858.1| PREDICTED: glucose dehydrogenase [acceptor]-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/516 (60%), Positives = 396/516 (76%), Gaps = 2/516 (0%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLN 60
G V RL E P+WK+LLLEAG +E+ T +P AHY QFT FNW F TE +P AC+G+
Sbjct: 67 GATVARRLAEVPEWKILLLEAGKQESIATSVPAIAHYFQFTDFNWAFKTEEEPNACQGVV 126
Query: 61 NERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVP 120
N+RC WP G+ +GG+++INNNIYTRGN DFDRW EAGN GW Y+DVLPYF K+ED+ +P
Sbjct: 127 NKRCLWPQGKGLGGSTIINNNIYTRGNVRDFDRWAEAGNPGWSYRDVLPYFLKNEDVTIP 186
Query: 121 ELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQ 180
ELKRS YHGVGG + + YSP+KS+L++AFLESAP+VGLN+ DYN+P+ +VGFSRIQGTI
Sbjct: 187 ELKRSPYHGVGGPMPISYSPFKSRLVEAFLESAPQVGLNVVDYNNPNSHVGFSRIQGTIN 246
Query: 181 FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKE 240
FGRR ++++A+LR + N H++ A V KVLIDPNTK GVEF K+N++R A+KE
Sbjct: 247 FGRRVTSARAYLRGNLT--NLHIVDGAFVTKVLIDPNTKVALGVEFEKDNRRRRAQARKE 304
Query: 241 VVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVG 300
V+LSAGAF +P LL+LSGIGP+E LE I ++DL+VG+NLQEHP++A+LAFTVNQ VG
Sbjct: 305 VILSAGAFNTPKLLMLSGIGPKEHLEPLGIKTISDLRVGDNLQEHPSYANLAFTVNQTVG 364
Query: 301 LVSDRIFSNLAKETIKAFTNQGWTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAI 360
L+ +RI+ +E + GW TT+GCEGLGYV+TKYN P VPDIEYIFVP SLA
Sbjct: 365 LIPERIYKQGIRELFNYYDGNGWLTTMGCEGLGYVKTKYNKDPGDVPDIEYIFVPMSLAG 424
Query: 361 EEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPA 420
EE G SLLR++MGIPD T +L + + NKD W+IW MLMYPES G VRL++A+P P
Sbjct: 425 EEGLGNSLLRRSMGIPDSTHYDLHKGIFNKDGWTIWTMLMYPESTGQVRLRNANPYSKPL 484
Query: 421 VQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCC 480
+++NFF P+D+LRIVEGIKMVIEL+KT AFQK S +S R +P C+ YGSD YW CC
Sbjct: 485 IRANFFDAPVDVLRIVEGIKMVIELNKTPAFQKLGSTMSLRTMPGCRHLSYGSDAYWECC 544
Query: 481 VRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGI 516
V++LTMQMHHQC T KMGP DR AVV+ +L V+G+
Sbjct: 545 VKRLTMQMHHQCCTAKMGPSSDRNAVVNSQLMVYGV 580
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Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|328705618|ref|XP_003242859.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|242018470|ref|XP_002429698.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] gi|212514701|gb|EEB16960.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|357631699|gb|EHJ79168.1| glucose dehydrogenase [Danaus plexippus] | Back alignment and taxonomy information |
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| >gi|322796401|gb|EFZ18935.1| hypothetical protein SINV_00375 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|332023084|gb|EGI63349.1| Glucose dehydrogenase [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|242018476|ref|XP_002429701.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] gi|212514704|gb|EEB16963.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|307206069|gb|EFN84162.1| Glucose dehydrogenase [acceptor] [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|195396657|ref|XP_002056947.1| GJ16803 [Drosophila virilis] gi|194146714|gb|EDW62433.1| GJ16803 [Drosophila virilis] | Back alignment and taxonomy information |
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| >gi|195043459|ref|XP_001991622.1| GH11960 [Drosophila grimshawi] gi|193901380|gb|EDW00247.1| GH11960 [Drosophila grimshawi] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 517 | ||||||
| FB|FBgn0030590 | 703 | CG9518 [Drosophila melanogaste | 0.990 | 0.728 | 0.451 | 7.2e-123 | |
| FB|FBgn0030598 | 626 | CG9503 [Drosophila melanogaste | 0.990 | 0.817 | 0.449 | 3e-117 | |
| FB|FBgn0039415 | 616 | CG6142 [Drosophila melanogaste | 0.988 | 0.829 | 0.436 | 3.8e-117 | |
| FB|FBgn0030592 | 726 | CG9514 [Drosophila melanogaste | 0.988 | 0.703 | 0.408 | 2.2e-112 | |
| FB|FBgn0030591 | 865 | CG9517 [Drosophila melanogaste | 0.982 | 0.587 | 0.401 | 9.7e-112 | |
| FB|FBgn0030588 | 621 | CG9521 [Drosophila melanogaste | 0.976 | 0.813 | 0.409 | 3.2e-104 | |
| FB|FBgn0030589 | 622 | CG9519 [Drosophila melanogaste | 0.974 | 0.810 | 0.395 | 9.7e-96 | |
| FB|FBgn0030587 | 616 | CG9522 [Drosophila melanogaste | 0.992 | 0.832 | 0.372 | 5.3e-95 | |
| FB|FBgn0030586 | 626 | CG12539 [Drosophila melanogast | 0.986 | 0.814 | 0.377 | 3e-94 | |
| FB|FBgn0030596 | 633 | CG12398 [Drosophila melanogast | 0.992 | 0.810 | 0.370 | 1.5e-92 |
| FB|FBgn0030590 CG9518 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 234/518 (45%), Positives = 334/518 (64%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLN 60
G VV NRL+E WKVLL+EAG +EN ++D+P A YLQ +K +W + TE AC G+
Sbjct: 68 GAVVANRLSEVRKWKVLLIEAGPDENEISDVPSLAAYLQLSKLDWAYKTEPSTKACLGMQ 127
Query: 61 NERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVP 120
N RC WP GR +GG+SV+N +Y RGN +D+D W GN GW Y +VL YFKKSED P
Sbjct: 128 NNRCNWPRGRVLGGSSVLNYMLYVRGNRHDYDHWASLGNPGWDYDNVLRYFKKSEDNRNP 187
Query: 121 ELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNLTDYNSPDGNVGFSRIQGTIQ 180
L ++YHG GG L V SP+ S L+ AF+E+ ++G + D N GF QGTI+
Sbjct: 188 YLANNKYHGRGGLLTVQESPWHSPLVAAFVEAGTQLGYDNRDINGAK-QAGFMIAQGTIR 246
Query: 181 FGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKRVVYAKKE 240
G R S ++AFLRPI R NFH+ + V +V+I+P T R VEF+K+ K + A++E
Sbjct: 247 RGSRCSTAKAFLRPIRMRKNFHLSMNSHVTRVIIEPGTMRAQAVEFVKHGKVYRIAARRE 306
Query: 241 VVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQVGENLQEHPAFASLAFTVNQKVG 300
V++SAGA +P L++LSG+GPR+ LE+ I VL DL VGEN+Q+H L F V++ V
Sbjct: 307 VIISAGAINTPQLMMLSGLGPRKHLEKHGIRVLQDLPVGENMQDHVGMGGLTFLVDKPVA 366
Query: 301 LVSDRIFSNLAKETIKAFTNQGWTTTLG-CEGLGYVRTKYNNYPPGVPDIEYIFVPASLA 359
+V DR F+ A +G TTLG EGL +V T Y+N PDI++ PAS+
Sbjct: 367 IVQDR-FNPTAVTFQYVLRERGPMTTLGGVEGLAFVHTPYSNRSLDWPDIQFHMAPASI- 424
Query: 360 IEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYP 419
G+ ++K +G+ + ++E++ + NKD+W+I P+L+ P SRG V+L+SA+P YP
Sbjct: 425 --NSDNGARVKKVLGLKESVYQEVYHPIANKDSWTIMPLLLRPRSRGSVKLRSANPFHYP 482
Query: 420 AVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSDDYWGC 479
+ +N+F DPLD +VEG K+ + +++ F+++ S+L + LP CK+HK+ SD Y C
Sbjct: 483 LINANYFDDPLDAKTLVEGAKIALRVAEAQVFKQFGSRLWRKPLPNCKQHKFLSDAYLEC 542
Query: 480 CVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517
VR ++M ++H CGT KMGP D AVVDPRLRV+G++
Sbjct: 543 HVRTISMTIYHPCGTAKMGPAWDPEAVVDPRLRVYGVR 580
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| FB|FBgn0030598 CG9503 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0039415 CG6142 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030592 CG9514 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030591 CG9517 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030588 CG9521 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030589 CG9519 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030587 CG9522 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030586 CG12539 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030596 CG12398 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q47944 | SDH_GLUOY | 1, ., 1, ., 9, 9, ., 3, 2 | 0.3308 | 0.9032 | 0.8794 | yes | N/A |
| P64264 | Y1310_MYCBO | 1, ., 1, ., -, ., - | 0.2963 | 0.9090 | 0.8901 | yes | N/A |
| P64263 | Y1279_MYCTU | 1, ., 1, ., -, ., - | 0.2963 | 0.9090 | 0.8901 | yes | N/A |
| Q2KB43 | BETA_RHIEC | 1, ., 1, ., 9, 9, ., 1 | 0.3174 | 0.9052 | 0.8524 | yes | N/A |
| C3MIE4 | BETA_RHISN | 1, ., 1, ., 9, 9, ., 1 | 0.3141 | 0.9129 | 0.8597 | yes | N/A |
| B1J0W6 | BETA_ECOLC | 1, ., 1, ., 9, 9, ., 1 | 0.3162 | 0.9168 | 0.8525 | yes | N/A |
| A7MFA8 | BETA_CROS8 | 1, ., 1, ., 9, 9, ., 1 | 0.3162 | 0.9168 | 0.8479 | yes | N/A |
| B9JBA2 | BETA_AGRRK | 1, ., 1, ., 9, 9, ., 1 | 0.3194 | 0.9032 | 0.8506 | yes | N/A |
| Q1RFM3 | BETA_ECOUT | 1, ., 1, ., 9, 9, ., 1 | 0.3200 | 0.9168 | 0.8434 | yes | N/A |
| Q6UPE0 | CHDH_RAT | 1, ., 1, ., 9, 9, ., 1 | 0.3147 | 0.9032 | 0.7796 | yes | N/A |
| B7N8L3 | BETA_ECOLU | 1, ., 1, ., 9, 9, ., 1 | 0.3219 | 0.9168 | 0.8525 | yes | N/A |
| A7ZWV4 | BETA_ECOHS | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| B7UJG4 | BETA_ECO27 | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| Q0T7N0 | BETA_SHIF8 | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| Q8NE62 | CHDH_HUMAN | 1, ., 1, ., 9, 9, ., 1 | 0.3233 | 0.9129 | 0.7946 | yes | N/A |
| P54223 | BETA_RHIME | 1, ., 1, ., 9, 9, ., 1 | 0.3200 | 0.9013 | 0.8488 | yes | N/A |
| Q1MJU4 | BETA_RHIL3 | 1, ., 1, ., 9, 9, ., 1 | 0.3212 | 0.9052 | 0.8524 | yes | N/A |
| B7M2V5 | BETA_ECO8A | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| B5Z1R0 | BETA_ECO5E | 1, ., 1, ., 9, 9, ., 1 | 0.3200 | 0.9168 | 0.8434 | yes | N/A |
| A7ZI50 | BETA_ECO24 | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| B7MCD0 | BETA_ECO45 | 1, ., 1, ., 9, 9, ., 1 | 0.3200 | 0.9168 | 0.8434 | yes | N/A |
| B6I074 | BETA_ECOSE | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| B7L439 | BETA_ECO55 | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
| A6T613 | BETA_KLEP7 | 1, ., 1, ., 9, 9, ., 1 | 0.3238 | 0.9168 | 0.8555 | yes | N/A |
| Q9WWW2 | ALKJ_PSEPU | 1, ., 1, ., 9, 9, ., - | 0.3022 | 0.9148 | 0.8568 | yes | N/A |
| Q8BJ64 | CHDH_MOUSE | 1, ., 1, ., 9, 9, ., 1 | 0.3058 | 0.9110 | 0.7902 | yes | N/A |
| Q8UH55 | BETA_AGRT5 | 1, ., 1, ., 9, 9, ., 1 | 0.3098 | 0.9090 | 0.8561 | yes | N/A |
| Q0TKW1 | BETA_ECOL5 | 1, ., 1, ., 9, 9, ., 1 | 0.3181 | 0.9168 | 0.8525 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 517 | |||
| PRK02106 | 560 | PRK02106, PRK02106, choline dehydrogenase; Validat | 1e-109 | |
| COG2303 | 542 | COG2303, BetA, Choline dehydrogenase and related f | 5e-95 | |
| TIGR01810 | 532 | TIGR01810, betA, choline dehydrogenase | 3e-87 | |
| TIGR03970 | 487 | TIGR03970, Rv0697, dehydrogenase, Rv0697 family | 6e-66 | |
| pfam00732 | 218 | pfam00732, GMC_oxred_N, GMC oxidoreductase | 1e-46 | |
| pfam05199 | 139 | pfam05199, GMC_oxred_C, GMC oxidoreductase | 2e-30 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 1e-15 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 5e-06 |
| >gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-109
Identities = 185/547 (33%), Positives = 263/547 (48%), Gaps = 95/547 (17%)
Query: 1 GCVVTNRLTENPDWKVLLLEAGDEENA---LTDIPETAHY-LQFTKFNWNFTTEFQPGAC 56
GCV+ NRL+E+PD VLLLEAG + +P + LQ ++NW + TE +P
Sbjct: 17 GCVLANRLSEDPDVSVLLLEAGGPDYRWDFFIQMPAALAFPLQGKRYNWAYETEPEPH-- 74
Query: 57 RGLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLE-AGNVGWGYKDVLPYFKKSE 115
+NN R P G+ +GG+S IN +Y RGN D+D W E G GW Y D LPYFKK+E
Sbjct: 75 --MNNRRMECPRGKVLGGSSSINGMVYIRGNAMDYDNWAELPGLEGWSYADCLPYFKKAE 132
Query: 116 DIDVPELKRSEYHGVGGYLNVDYS-PYKSKLMDAFLESAPEVGLNLT-DYNSPDGNVGFS 173
D E +Y G G L+V P + L AF+E+ + G T D N GF
Sbjct: 133 TRDGGE---DDYRGGDGPLSVTRGKPGTNPLFQAFVEAGVQAGYPRTDDLNGYQQE-GFG 188
Query: 174 RIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTKRVFGVEFMKNNKKR 233
+ T+ GRR+SA++A+L P ++RPN ++ A ++L + KR GVE+ + +
Sbjct: 189 PMDRTVTNGRRWSAARAYLDPALKRPNLTIVTHALTDRILFEG--KRAVGVEYERGGGRE 246
Query: 234 VVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLA 292
A++EV+LSAGA SP LL LSGIGP E L++ IPV+ DL VGENLQ+H L
Sbjct: 247 TARARREVILSAGAINSPQLLQLSGIGPAEHLKELGIPVVHDLPGVGENLQDH-----LE 301
Query: 293 FTVNQKVGL-VSDRIFSNLA---KETIKA---FTNQGWTTTLGCEGLGYVRTKYNNYPPG 345
+ + VS ++ L K I A FT G + E G++R++ G
Sbjct: 302 VYIQYECKQPVS--LYPALKWWNKPKIGAEWLFTGTGLGASNHFEAGGFIRSR-----AG 354
Query: 346 V--PDIEYIFVPASL-----AIEEEKG-----GSLLRKTMGIPDRTFKELFRDVKNKDAW 393
V P+I+Y F+P ++ + G G
Sbjct: 355 VDWPNIQYHFLPVAIRYDGSNAVKGHGFQAHVGP-------------------------- 388
Query: 394 SIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQK 453
M SRG V+LKSADP +P++ N+ D + I++ E+ A
Sbjct: 389 ------MRSPSRGSVKLKSADPRAHPSILFNYMSTEQDWREFRDAIRLTREIMAQPALDP 442
Query: 454 YKSKLSTRILPACKKHKYGSD---DYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPR 510
Y+ + I P +D D + VR+ +H TCKMG D AVVDP
Sbjct: 443 YRGR---EISPGADVQ---TDEEIDAF---VREHAETAYHPSCTCKMGT--DPMAVVDPE 491
Query: 511 LRVHGIK 517
RVHG++
Sbjct: 492 GRVHGVE 498
|
Length = 560 |
| >gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family | Back alignment and domain information |
|---|
| >gnl|CDD|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| KOG1238|consensus | 623 | 100.0 | ||
| TIGR01810 | 532 | betA choline dehydrogenase. This enzyme is a membe | 100.0 | |
| PRK02106 | 560 | choline dehydrogenase; Validated | 100.0 | |
| COG2303 | 542 | BetA Choline dehydrogenase and related flavoprotei | 100.0 | |
| PLN02785 | 587 | Protein HOTHEAD | 100.0 | |
| PF00732 | 296 | GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 | 100.0 | |
| TIGR02462 | 544 | pyranose_ox pyranose oxidase. Pyranose oxidase (al | 100.0 | |
| PF05199 | 144 | GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078 | 99.89 | |
| PRK12837 | 513 | 3-ketosteroid-delta-1-dehydrogenase; Provisional | 98.39 | |
| PRK12835 | 584 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 98.35 | |
| PRK12844 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 98.28 | |
| PRK07121 | 492 | hypothetical protein; Validated | 98.24 | |
| PRK12845 | 564 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 98.15 | |
| PF00890 | 417 | FAD_binding_2: FAD binding domain of the Pfam fami | 98.14 | |
| PRK08274 | 466 | tricarballylate dehydrogenase; Validated | 98.08 | |
| TIGR01813 | 439 | flavo_cyto_c flavocytochrome c. This model describ | 97.87 | |
| PF01266 | 358 | DAO: FAD dependent oxidoreductase; InterPro: IPR00 | 97.79 | |
| PRK06481 | 506 | fumarate reductase flavoprotein subunit; Validated | 97.77 | |
| PRK06134 | 581 | putative FAD-binding dehydrogenase; Reviewed | 97.73 | |
| PRK11101 | 546 | glpA sn-glycerol-3-phosphate dehydrogenase subunit | 97.71 | |
| PRK06175 | 433 | L-aspartate oxidase; Provisional | 97.64 | |
| PRK12843 | 578 | putative FAD-binding dehydrogenase; Reviewed | 97.63 | |
| PRK12842 | 574 | putative succinate dehydrogenase; Reviewed | 97.53 | |
| TIGR02485 | 432 | CobZ_N-term precorrin 3B synthase CobZ. CobZ is es | 97.52 | |
| PLN02815 | 594 | L-aspartate oxidase | 97.51 | |
| PRK12834 | 549 | putative FAD-binding dehydrogenase; Reviewed | 97.49 | |
| PTZ00306 | 1167 | NADH-dependent fumarate reductase; Provisional | 97.47 | |
| PRK06263 | 543 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.46 | |
| PRK07395 | 553 | L-aspartate oxidase; Provisional | 97.46 | |
| PRK08958 | 588 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.45 | |
| TIGR03377 | 516 | glycerol3P_GlpA glycerol-3-phosphate dehydrogenase | 97.44 | |
| PRK06452 | 566 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.43 | |
| PRK05675 | 570 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.43 | |
| PRK09078 | 598 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.26 | |
| PLN00128 | 635 | Succinate dehydrogenase [ubiquinone] flavoprotein | 97.26 | |
| TIGR01816 | 565 | sdhA_forward succinate dehydrogenase, flavoprotein | 97.25 | |
| TIGR01811 | 603 | sdhA_Bsu succinate dehydrogenase or fumarate reduc | 97.25 | |
| PTZ00139 | 617 | Succinate dehydrogenase [ubiquinone] flavoprotein | 97.24 | |
| PRK07573 | 640 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.22 | |
| TIGR01812 | 566 | sdhA_frdA_Gneg succinate dehydrogenase or fumarate | 97.2 | |
| PRK06854 | 608 | adenylylsulfate reductase subunit alpha; Validated | 97.19 | |
| PRK05945 | 575 | sdhA succinate dehydrogenase flavoprotein subunit; | 97.19 | |
| PRK09077 | 536 | L-aspartate oxidase; Provisional | 97.17 | |
| TIGR00551 | 488 | nadB L-aspartate oxidase. L-aspartate oxidase is t | 97.09 | |
| PRK07804 | 541 | L-aspartate oxidase; Provisional | 97.08 | |
| PRK08641 | 589 | sdhA succinate dehydrogenase flavoprotein subunit; | 96.98 | |
| TIGR01176 | 580 | fum_red_Fp fumarate reductase, flavoprotein subuni | 96.94 | |
| PRK07843 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.94 | |
| PRK07057 | 591 | sdhA succinate dehydrogenase flavoprotein subunit; | 96.93 | |
| PRK08275 | 554 | putative oxidoreductase; Provisional | 96.92 | |
| PRK08071 | 510 | L-aspartate oxidase; Provisional | 96.9 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 96.9 | |
| COG0579 | 429 | Predicted dehydrogenase [General function predicti | 96.8 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.77 | |
| PRK00711 | 416 | D-amino acid dehydrogenase small subunit; Validate | 96.64 | |
| PRK06069 | 577 | sdhA succinate dehydrogenase flavoprotein subunit; | 96.49 | |
| PRK11728 | 393 | hydroxyglutarate oxidase; Provisional | 96.47 | |
| TIGR01373 | 407 | soxB sarcosine oxidase, beta subunit family, heter | 96.2 | |
| TIGR02352 | 337 | thiamin_ThiO glycine oxidase ThiO. This family con | 96.17 | |
| TIGR01377 | 380 | soxA_mon sarcosine oxidase, monomeric form. Sarcos | 95.99 | |
| PRK12839 | 572 | hypothetical protein; Provisional | 95.91 | |
| TIGR03364 | 365 | HpnW_proposed FAD dependent oxidoreductase TIGR033 | 95.89 | |
| COG1053 | 562 | SdhA Succinate dehydrogenase/fumarate reductase, f | 95.88 | |
| COG2081 | 408 | Predicted flavoproteins [General function predicti | 95.46 | |
| PRK08401 | 466 | L-aspartate oxidase; Provisional | 95.45 | |
| PRK13977 | 576 | myosin-cross-reactive antigen; Provisional | 95.14 | |
| TIGR03329 | 460 | Phn_aa_oxid putative aminophosphonate oxidoreducta | 94.91 | |
| PRK11259 | 376 | solA N-methyltryptophan oxidase; Provisional | 94.78 | |
| PF06039 | 488 | Mqo: Malate:quinone oxidoreductase (Mqo); InterPro | 94.41 | |
| COG3380 | 331 | Predicted NAD/FAD-dependent oxidoreductase [Genera | 94.28 | |
| COG3573 | 552 | Predicted oxidoreductase [General function predict | 94.24 | |
| PRK07512 | 513 | L-aspartate oxidase; Provisional | 93.73 | |
| KOG2404|consensus | 477 | 93.53 | ||
| PTZ00363 | 443 | rab-GDP dissociation inhibitor; Provisional | 93.51 | |
| TIGR00275 | 400 | flavoprotein, HI0933 family. The model when search | 93.48 | |
| PRK07803 | 626 | sdhA succinate dehydrogenase flavoprotein subunit; | 93.45 | |
| PRK08626 | 657 | fumarate reductase flavoprotein subunit; Provision | 93.36 | |
| PRK09231 | 582 | fumarate reductase flavoprotein subunit; Validated | 93.2 | |
| COG0029 | 518 | NadB Aspartate oxidase [Coenzyme metabolism] | 93.06 | |
| PRK08205 | 583 | sdhA succinate dehydrogenase flavoprotein subunit; | 92.46 | |
| PRK01747 | 662 | mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans | 91.33 | |
| PLN02464 | 627 | glycerol-3-phosphate dehydrogenase | 91.29 | |
| TIGR02061 | 614 | aprA adenosine phosphosulphate reductase, alpha su | 90.96 | |
| PF13738 | 203 | Pyr_redox_3: Pyridine nucleotide-disulphide oxidor | 90.46 | |
| PRK05257 | 494 | malate:quinone oxidoreductase; Validated | 90.06 | |
| PRK13339 | 497 | malate:quinone oxidoreductase; Reviewed | 89.81 | |
| TIGR03378 | 419 | glycerol3P_GlpB glycerol-3-phosphate dehydrogenase | 89.77 | |
| PTZ00383 | 497 | malate:quinone oxidoreductase; Provisional | 88.81 | |
| PRK05329 | 422 | anaerobic glycerol-3-phosphate dehydrogenase subun | 88.6 | |
| TIGR01320 | 483 | mal_quin_oxido malate:quinone-oxidoreductase. This | 88.21 | |
| PF12831 | 428 | FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 | 87.36 | |
| PLN02661 | 357 | Putative thiazole synthesis | 86.39 | |
| COG0578 | 532 | GlpA Glycerol-3-phosphate dehydrogenase [Energy pr | 86.17 | |
| PF13450 | 68 | NAD_binding_8: NAD(P)-binding Rossmann-like domain | 86.1 | |
| PF01134 | 392 | GIDA: Glucose inhibited division protein A; InterP | 83.28 | |
| PRK06185 | 407 | hypothetical protein; Provisional | 82.58 | |
| PRK04176 | 257 | ribulose-1,5-biphosphate synthetase; Provisional | 81.79 | |
| TIGR02733 | 492 | desat_CrtD C-3',4' desaturase CrtD. Members of thi | 80.94 | |
| TIGR02730 | 493 | carot_isom carotene isomerase. Members of this fam | 80.88 |
| >KOG1238|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-105 Score=823.14 Aligned_cols=505 Identities=44% Similarity=0.796 Sum_probs=451.7
Q ss_pred CchhccccccCCCCeEEEEcccCCCCCCcccccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhhhcc
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENALTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASVINN 80 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n~ 80 (517)
||+||+||||++.+||||||||+.++...++|.+...++.+.+||.|.++|+..+|+.+.++.+.|+|||+|||||++|+
T Consensus 69 GcvlAarLSEn~~~~VLLLEaGg~~~~~~~~p~~~~~~q~s~~dw~y~t~Ps~~ac~~m~~~~c~wpRGrVLGGsS~iN~ 148 (623)
T KOG1238|consen 69 GCVLAARLSENPNWSVLLLEAGGDPPLYSDPPLLAANLQLSLYDWSYHTEPSQHACLAMSEDRCYWPRGRVLGGSSVLNA 148 (623)
T ss_pred hHHHHHhhccCCCceEEEEecCCCCcccccchHHHHHhccccccccCcCccChhhhhhhcCCceecCccceecccccccc
Confidence 89999999999999999999999987778889777778889999999999999999999999999999999999999999
Q ss_pred eeeecCChhhHHHHHHhCCCCCCccchHHHHHhhccCCCCCCCCCCcccCCCceEeecCCCCChhHHHHHHHHHHcCCCC
Q psy10349 81 NIYTRGNPNDFDRWLEAGNVGWGYKDVLPYFKKSEDIDVPELKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNL 160 (517)
Q Consensus 81 ~~~~r~~~~df~~w~~~g~~~W~~~~l~py~~~~e~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~a~~~~G~~~ 160 (517)
|+|.|+++.|||+|++.|++||+|++++|||+|+|+...+.....++|+..||+.+....+.+++...|.++.+++|.+.
T Consensus 149 m~Y~RG~r~Dyd~W~~~gnpgW~y~~vl~yf~k~E~~~~~~~~~~~y~~~~g~~~ve~~~~~~~~~~~~~~ag~e~G~~~ 228 (623)
T KOG1238|consen 149 MFYVRGNRRDYDRWAAEGNPGWSYDEVLPYFKKSEDKVVPDPELTPYHGAGGPLLVEAGVYPNNLFTAFHRAGTEIGGSI 228 (623)
T ss_pred eEEecCCccchHHHHHhcCCCCCHHHHHHHHHHHhhccCCCcccCcccccCCcceeccccccCchhhHhHHhHHhcCCCc
Confidence 99999999999999999999999999999999999997766556669999999999998999999999999999999777
Q ss_pred CCCCCCCCCcccccccccccCCcccchhhhhhcccCC-CCCeEEEcCcEEEEEEecCCCCeEEEEEEEeC-CeEEEEEec
Q psy10349 161 TDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVE-RPNFHVMKKARVLKVLIDPNTKRVFGVEFMKN-NKKRVVYAK 238 (517)
Q Consensus 161 ~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~-~~nl~i~~~~~V~ri~~~~~~~~a~gV~~~~~-g~~~~v~a~ 238 (517)
.|+|+.. +.|+...+.++++|.|+|++.+|+.++.. |+||+|..++.|+||++|..++++.||++.++ |++++++|+
T Consensus 229 ~D~nG~~-~tg~~~l~~t~~~g~R~s~~~a~l~~~~~~R~NL~~~~~~~vtrvl~D~~~~~a~gv~~~~~~~~~~~v~a~ 307 (623)
T KOG1238|consen 229 FDRNGER-HTGASLLQYTIRNGIRVSLAKAYLKPIRLTRPNLHISRNAAVTRVLIDPAGKRAKGVEFVRDGGKEHTVKAR 307 (623)
T ss_pred cCCCCcc-ccchhhhhccccCCEEEEehhhhhhhhhccCccccccccceEEEEEEcCCCceEEEEEEEecCceeeeeccc
Confidence 8999999 99999999999999999999999999876 99999999999999999988899999999987 899999999
Q ss_pred ceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccccchhhhhhhHHHHHHHH
Q psy10349 239 KEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVGLVSDRIFSNLAKETIKA 317 (517)
Q Consensus 239 keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (517)
||||||||||+||||||+|||||+++|+++|||++.||| ||+|||||+.. .+...+..+.+.....+. .+ ..+.+
T Consensus 308 kEVILSAGAi~SPQLLMLSGIGP~~~L~~~gIpvv~dLP~VG~nLqDH~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~ 383 (623)
T KOG1238|consen 308 KEVILSAGAINSPQLLMLSGIGPADHLKKLGIPVVLDLPGVGQNLQDHPMN-PGFVFSTNPVELSLIRLV-GI--TTVGQ 383 (623)
T ss_pred ceEEEeccccCCHHHHHHcCCCcHHHHHhcCCCeeccCccccccccccccc-ceeeecCCCccccccccc-cc--hHHHH
Confidence 999999999999999999999999999999999999999 99999999997 444444444333222222 22 45666
Q ss_pred h--ccCC-cccCCccceEEEEecCCCCCCCCCCCeeEEeecccchhhhhccchhhhhhcCCChhhHHhhhcccCCCCeEE
Q psy10349 318 F--TNQG-WTTTLGCEGLGYVRTKYNNYPPGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDAWS 394 (517)
Q Consensus 318 ~--~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (517)
| .++| +...+ .+..+|+++.....+..+||+|+++.++.+.+ +.+..+....+ ++++.++.+......+.
T Consensus 384 yl~~~~G~~~~~~-~e~~~f~~t~~~~~~~~~PD~~~~~~~~~~~~---~~~~~~~~~~~---~~y~~~~~~~~~~~~~~ 456 (623)
T KOG1238|consen 384 YLEGGSGPLASPG-VETLGFINTVSSNLSLDWPDIELHFVAGSLSS---DGLTALRKALG---EIYQALFGELTNSDSFV 456 (623)
T ss_pred HHHcCCCCcccCc-ceeeEEeccccccCcCCCCCeeEEeccccccc---cchhhhhhhcc---hHHHHhhhhhhcCceeE
Confidence 6 6778 66333 78899999887776678899998887766655 54444555444 56666666665556788
Q ss_pred EeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHHHHHHHHHHhcCchhhhhhhccccccCCCCcCCCCCCH
Q psy10349 395 IWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQKYKSKLSTRILPACKKHKYGSD 474 (517)
Q Consensus 395 ~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~s~ 474 (517)
|+..+++|+|||+|+|.|+||++.|+|++||+.+|.|++.++++|+.+.++.++++|++++.++...++|+|+.....||
T Consensus 457 i~~~~l~P~SrG~l~L~s~nP~~~P~I~~NY~~~p~Dv~~~vegi~~~~~l~~s~af~~~~~r~~~~~~~~c~~~~~~sd 536 (623)
T KOG1238|consen 457 IFPKLLRPKSRGRLKLRSTNPRDNPLITPNYFTHPEDVATLVEGIRTIIRLSNSKAFQRFGARLWKKPVPGCDLLAFLSD 536 (623)
T ss_pred EeehhcCCCccceEEecCCCCCcCceeccCcCCCHHHHHHHHHHHHHHHHHHcCHHHHHhcchhccccCCCcccccCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999998889999998889999
Q ss_pred HHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 475 DYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 475 ~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
++|+||+|+.+.|.||++|||+|||..|+++|||+++|||||+
T Consensus 537 ~yw~c~~R~~~~TiyH~~GtckMGp~~D~~aVVD~~lrV~Gv~ 579 (623)
T KOG1238|consen 537 AYWECFCRHTVVTIYHYSGTCKMGPSSDPTAVVDPQLRVHGVR 579 (623)
T ss_pred HHHHHHHHhccceeeccCCceEeCCccCCCcccCCcceecccc
Confidence 9999999999999999999999999999999999999999985
|
|
| >TIGR01810 betA choline dehydrogenase | Back alignment and domain information |
|---|
| >PRK02106 choline dehydrogenase; Validated | Back alignment and domain information |
|---|
| >COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02785 Protein HOTHEAD | Back alignment and domain information |
|---|
| >PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >TIGR02462 pyranose_ox pyranose oxidase | Back alignment and domain information |
|---|
| >PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK07121 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PF00890 FAD_binding_2: FAD binding domain of the Pfam family | Back alignment and domain information |
|---|
| >PRK08274 tricarballylate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >TIGR01813 flavo_cyto_c flavocytochrome c | Back alignment and domain information |
|---|
| >PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 | Back alignment and domain information |
|---|
| >PRK06481 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >PRK06134 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional | Back alignment and domain information |
|---|
| >PRK06175 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK12843 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12842 putative succinate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02485 CobZ_N-term precorrin 3B synthase CobZ | Back alignment and domain information |
|---|
| >PLN02815 L-aspartate oxidase | Back alignment and domain information |
|---|
| >PRK12834 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00306 NADH-dependent fumarate reductase; Provisional | Back alignment and domain information |
|---|
| >PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK07395 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit | Back alignment and domain information |
|---|
| >PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit | Back alignment and domain information |
|---|
| >TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E | Back alignment and domain information |
|---|
| >TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup | Back alignment and domain information |
|---|
| >PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup | Back alignment and domain information |
|---|
| >PRK06854 adenylylsulfate reductase subunit alpha; Validated | Back alignment and domain information |
|---|
| >PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK09077 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >TIGR00551 nadB L-aspartate oxidase | Back alignment and domain information |
|---|
| >PRK07804 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit | Back alignment and domain information |
|---|
| >PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK08275 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK08071 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
| >COG0579 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK00711 D-amino acid dehydrogenase small subunit; Validated | Back alignment and domain information |
|---|
| >PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK11728 hydroxyglutarate oxidase; Provisional | Back alignment and domain information |
|---|
| >TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form | Back alignment and domain information |
|---|
| >TIGR02352 thiamin_ThiO glycine oxidase ThiO | Back alignment and domain information |
|---|
| >TIGR01377 soxA_mon sarcosine oxidase, monomeric form | Back alignment and domain information |
|---|
| >PRK12839 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 | Back alignment and domain information |
|---|
| >COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG2081 Predicted flavoproteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08401 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK13977 myosin-cross-reactive antigen; Provisional | Back alignment and domain information |
|---|
| >TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase | Back alignment and domain information |
|---|
| >PRK11259 solA N-methyltryptophan oxidase; Provisional | Back alignment and domain information |
|---|
| >PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle | Back alignment and domain information |
|---|
| >COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
| >COG3573 Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK07512 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >KOG2404|consensus | Back alignment and domain information |
|---|
| >PTZ00363 rab-GDP dissociation inhibitor; Provisional | Back alignment and domain information |
|---|
| >TIGR00275 flavoprotein, HI0933 family | Back alignment and domain information |
|---|
| >PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK08626 fumarate reductase flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >PRK09231 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >COG0029 NadB Aspartate oxidase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed | Back alignment and domain information |
|---|
| >PLN02464 glycerol-3-phosphate dehydrogenase | Back alignment and domain information |
|---|
| >TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit | Back alignment and domain information |
|---|
| >PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A | Back alignment and domain information |
|---|
| >PRK05257 malate:quinone oxidoreductase; Validated | Back alignment and domain information |
|---|
| >PRK13339 malate:quinone oxidoreductase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit | Back alignment and domain information |
|---|
| >PTZ00383 malate:quinone oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase | Back alignment and domain information |
|---|
| >PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A | Back alignment and domain information |
|---|
| >PLN02661 Putative thiazole synthesis | Back alignment and domain information |
|---|
| >COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G | Back alignment and domain information |
|---|
| >PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria | Back alignment and domain information |
|---|
| >PRK06185 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK04176 ribulose-1,5-biphosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR02733 desat_CrtD C-3',4' desaturase CrtD | Back alignment and domain information |
|---|
| >TIGR02730 carot_isom carotene isomerase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 517 | ||||
| 3fim_B | 566 | Crystal Structure Of Aryl-Alcohol-Oxidase From Pleu | 8e-39 | ||
| 3t37_A | 526 | Crystal Structure Of Pyridoxine 4-Oxidase From Meso | 2e-38 | ||
| 3q9t_A | 577 | Crystal Structure Analysis Of Formate Oxidase Lengt | 1e-34 | ||
| 2jbv_A | 546 | Crystal Structure Of Choline Oxidase Reveals Insigh | 3e-34 | ||
| 1cf3_A | 583 | Glucose Oxidase From Apergillus Niger Length = 583 | 4e-34 | ||
| 3ljp_A | 546 | Crystal Structure Of Choline Oxidase V464a Mutant L | 5e-34 | ||
| 3nne_A | 546 | Crystal Structure Of Choline Oxidase S101a Mutant L | 5e-34 | ||
| 1gpe_A | 587 | Glucose Oxidase From Penicillium Amagasakiense Leng | 9e-32 | ||
| 3red_A | 521 | 3.0 A Structure Of The Prunus Mume Hydroxynitrile L | 5e-18 | ||
| 3gdn_A | 521 | Almond Hydroxynitrile Lyase In Complex With Benzald | 6e-15 | ||
| 1ju2_A | 536 | Crystal Structure Of The Hydroxynitrile Lyase From | 6e-15 | ||
| 1kdg_A | 546 | Crystal Structure Of The Flavin Domain Of Cellobios | 7e-08 | ||
| 1naa_A | 541 | Cellobiose Dehydrogenase Flavoprotein Fragment In C | 7e-08 |
| >pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus Eryingii Length = 566 | Back alignment and structure |
|
| >pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti Length = 526 | Back alignment and structure |
| >pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase Length = 577 | Back alignment and structure |
| >pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism Length = 546 | Back alignment and structure |
| >pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger Length = 583 | Back alignment and structure |
| >pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant Length = 546 | Back alignment and structure |
| >pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant Length = 546 | Back alignment and structure |
| >pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense Length = 587 | Back alignment and structure |
| >pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 Length = 521 | Back alignment and structure |
| >pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde Length = 521 | Back alignment and structure |
| >pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond Length = 536 | Back alignment and structure |
| >pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase Length = 546 | Back alignment and structure |
| >pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam Length = 541 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Length = 566 | Back alignment and structure |
|---|
Score = 547 bits (1411), Expect = 0.0
Identities = 141/545 (25%), Positives = 217/545 (39%), Gaps = 57/545 (10%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG--DEENALTDIPETAHYLQF-TKFNWNFTTEFQPGACR 57
G VV RLTE+PD VL+LEAG DE + P A L + F+WN+TT Q G
Sbjct: 14 GNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG--- 70
Query: 58 GLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFDRWLE-AGNVGWGYKDVLPYFKKSED 116
N +P GR +GG+S ++ + RG+ DFDR+ G+ GW + ++ + +K+E
Sbjct: 71 -YNGRSIAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEM 129
Query: 117 IDVPE-------LKRSEYHGVGGYLNVDYSPYKSKLMDAFLESAPEVGLNL---TDYNSP 166
+ P HG G +++ + + L D L + E D +
Sbjct: 130 VVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRVLATTQEQSEEFFFNPDMGTG 189
Query: 167 DGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNTK-----RV 221
+G S ++ G+R S+S A+LRP RPN V+ A+V K++ T R
Sbjct: 190 H-PLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRC 248
Query: 222 FGVEFMKNNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL-QVGE 280
+ V AKKEVVLSAG+ +P LL LSGIG L I + + VG
Sbjct: 249 VEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGR 308
Query: 281 NLQEHPAFASLAFTVNQKVGL-VSDRIFSNLAKETIK-AFTNQGWTTTLGCEGLGYVRTK 338
NL +H AF VN R S + + T G T L L ++R
Sbjct: 309 NLSDHLLL-PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLP 367
Query: 339 YNNYP------PGVPDIEYIFVPASLAIEEEKGGSLLRKTMGIPDRTFKELFRDVKNKDA 392
N+ P + ++ F
Sbjct: 368 SNSSIFQTFPDPAAGPNSAHWETIFS------------------NQWFHPAIPRPDTGSF 409
Query: 393 WSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELSKTNAFQ 452
S+ L+ P +RG ++L +++P P + + D+ +++ +K + A+
Sbjct: 410 MSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWA 469
Query: 453 KYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLR 512
+ + P D +R + H GT M P G VVDP L+
Sbjct: 470 DFVIRP---FDPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLK 524
Query: 513 VHGIK 517
V G+
Sbjct: 525 VKGVD 529
|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Length = 587 | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Length = 577 | Back alignment and structure |
|---|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Length = 583 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Length = 526 | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Length = 536 | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Length = 546 | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| 3fim_B | 566 | ARYL-alcohol oxidase; AAO, lignin degradation, oxi | 100.0 | |
| 3qvp_A | 583 | Glucose oxidase; oxidoreductase; HET: NAG BMA MAN | 100.0 | |
| 3q9t_A | 577 | Choline dehydrogenase and related flavoproteins; g | 100.0 | |
| 1gpe_A | 587 | Protein (glucose oxidase); oxidoreductase(flavopro | 100.0 | |
| 3t37_A | 526 | Probable dehydrogenase; BET alpha beta fold, ADP b | 100.0 | |
| 2jbv_A | 546 | Choline oxidase; alcohol oxidation, flavoenyzme ox | 100.0 | |
| 1ju2_A | 536 | HydroxynitrIle lyase; flavin, GMC oxidoreductase, | 100.0 | |
| 1kdg_A | 546 | CDH, cellobiose dehydrogenase; GMC oxidoreductase, | 100.0 | |
| 1n4w_A | 504 | CHOD, cholesterol oxidase; flavoenzyme, steroid me | 100.0 | |
| 1coy_A | 507 | Cholesterol oxidase; oxidoreductase(oxygen recepto | 100.0 | |
| 3pl8_A | 623 | Pyranose 2-oxidase; substrate complex, H167A mutan | 100.0 | |
| 4at0_A | 510 | 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore | 98.75 | |
| 1qo8_A | 566 | Flavocytochrome C3 fumarate reductase; oxidoreduct | 98.15 | |
| 1y0p_A | 571 | Fumarate reductase flavoprotein subunit; flavocyto | 98.0 | |
| 1d4d_A | 572 | Flavocytochrome C fumarate reductase; oxidoreducta | 97.83 | |
| 2h88_A | 621 | Succinate dehydrogenase flavoprotein subunit; comp | 97.49 | |
| 2bs2_A | 660 | Quinol-fumarate reductase flavoprotein subunit A; | 97.4 | |
| 3dme_A | 369 | Conserved exported protein; structural genomics, P | 97.38 | |
| 2wdq_A | 588 | Succinate dehydrogenase flavoprotein subunit; succ | 97.26 | |
| 1chu_A | 540 | Protein (L-aspartate oxidase); flavoenzyme, NAD bi | 97.17 | |
| 3nyc_A | 381 | D-arginine dehydrogenase; FAD, imino-arginine, oxi | 97.09 | |
| 1y56_B | 382 | Sarcosine oxidase; dehydrogenase, protein-protein | 97.08 | |
| 2gag_B | 405 | Heterotetrameric sarcosine oxidase beta-subunit; f | 96.82 | |
| 1pj5_A | 830 | N,N-dimethylglycine oxidase; channelling, FAD bind | 96.76 | |
| 2oln_A | 397 | NIKD protein; flavoprotein, rossmann fold, oxidore | 96.66 | |
| 3ps9_A | 676 | TRNA 5-methylaminomethyl-2-thiouridine biosynthes | 96.6 | |
| 1jnr_A | 643 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 96.6 | |
| 2gf3_A | 389 | MSOX, monomeric sarcosine oxidase; flavoprotein ox | 96.58 | |
| 3gyx_A | 662 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 96.54 | |
| 3pvc_A | 689 | TRNA 5-methylaminomethyl-2-thiouridine biosynthes | 96.08 | |
| 2uzz_A | 372 | N-methyl-L-tryptophan oxidase; N-methyltryptophan | 95.64 | |
| 2e5v_A | 472 | L-aspartate oxidase; archaea, oxidoreductase; HET: | 94.49 | |
| 2rgh_A | 571 | Alpha-glycerophosphate oxidase; flavoprotein oxida | 94.02 | |
| 3da1_A | 561 | Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 | 93.95 | |
| 1kf6_A | 602 | Fumarate reductase flavoprotein; respiration, fuma | 93.64 | |
| 4dgk_A | 501 | Phytoene dehydrogenase; the FAD/NAD(P)-binding ros | 90.78 | |
| 3dje_A | 438 | Fructosyl amine: oxygen oxidoreductase; fructosyl- | 90.32 | |
| 1rp0_A | 284 | ARA6, thiazole biosynthetic enzyme; protein ligand | 90.28 | |
| 3ka7_A | 425 | Oxidoreductase; structural genomics, PSI-2, protei | 89.83 | |
| 3cgv_A | 397 | Geranylgeranyl reductase related protein; NP_39399 | 89.14 | |
| 2i0z_A | 447 | NAD(FAD)-utilizing dehydrogenases; structural geno | 88.62 | |
| 3e1t_A | 512 | Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro | 88.47 | |
| 3axb_A | 448 | Putative oxidoreductase; dinucleotide-binding fold | 88.36 | |
| 3atr_A | 453 | Conserved archaeal protein; saturating double bond | 88.15 | |
| 2qcu_A | 501 | Aerobic glycerol-3-phosphate dehydrogenase; glycer | 86.74 | |
| 3f8d_A | 323 | Thioredoxin reductase (TRXB-3); redox protein, nuc | 86.15 | |
| 3cty_A | 319 | Thioredoxin reductase; FAD, oxidoreductase, flavin | 85.59 | |
| 2zxi_A | 637 | TRNA uridine 5-carboxymethylaminomethyl modificat | 83.86 | |
| 3itj_A | 338 | Thioredoxin reductase 1; disulfide B flavoprotein, | 83.16 | |
| 3ces_A | 651 | MNMG, tRNA uridine 5-carboxymethylaminomethyl modi | 82.7 | |
| 3i3l_A | 591 | Alkylhalidase CMLS; flavin-dependent halogenase, c | 82.29 | |
| 1trb_A | 320 | Thioredoxin reductase; oxidoreductase(flavoenzyme) | 80.97 | |
| 3nlc_A | 549 | Uncharacterized protein VP0956; FAD-binding protei | 80.87 | |
| 1fl2_A | 310 | Alkyl hydroperoxide reductase subunit F; reactive | 80.61 | |
| 3jsk_A | 344 | Cypbp37 protein; octameric thiazole synthase, bios | 80.07 |
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-94 Score=772.05 Aligned_cols=482 Identities=29% Similarity=0.464 Sum_probs=403.9
Q ss_pred CchhccccccCCCCeEEEEcccCCC--CCCcccccccccccC-CCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEE--NALTDIPETAHYLQF-TKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~--~~~~~~p~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
||++|.||||+++.+|||||||+.. .....+|.++..+.. +.++|.|.++||+ +++++.+.|+|||+|||||+
T Consensus 14 G~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~~~rGk~lGGsS~ 89 (566)
T 3fim_B 14 GNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIAYPRGRMLGGSSS 89 (566)
T ss_dssp HHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCBCCCBCBTTGGGG
T ss_pred HHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEeccCCcEEcCccc
Confidence 7999999999899999999999876 234567876655543 7899999999998 78899999999999999999
Q ss_pred hcceeeecCChhhHHHHHHh-CCCCCCccchHHHHHhhccCCCCCC-------CCCCcccCCCceEeecCCCCChhHHHH
Q psy10349 78 INNNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSEDIDVPEL-------KRSEYHGVGGYLNVDYSPYKSKLMDAF 149 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~-g~~~W~~~~l~py~~~~e~~~~~~~-------~~~~~~g~~g~~~~~~~~~~~~~~~~~ 149 (517)
||+|+|+|+.+.|||.|++. |+++|+|++|+|||+|+|++..+.. .++.+||.+||++++++.+..++...|
T Consensus 90 iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~~~~~~~~ 169 (566)
T 3fim_B 90 VHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRV 169 (566)
T ss_dssp TSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSSCCTHHHHH
T ss_pred ccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCCCCHHHHHH
Confidence 99999999999999999998 9999999999999999999976521 134689999999999988889999999
Q ss_pred HHHHHHc--CCCC-CCCCCCCCCcccccccccccCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecC--CC-CeEEE
Q psy10349 150 LESAPEV--GLNL-TDYNSPDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDP--NT-KRVFG 223 (517)
Q Consensus 150 ~~a~~~~--G~~~-~d~~~~~~~~g~~~~~~~~~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~--~~-~~a~g 223 (517)
+++++++ |++. .|+|++. ..|+++++.++++|.|++++.+||.++++|+||+|++++.|+||++++ ++ ++|+|
T Consensus 170 ~~a~~~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~G 248 (566)
T 3fim_B 170 LATTQEQSEEFFFNPDMGTGH-PLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRC 248 (566)
T ss_dssp HHHHHHTHHHHCBCSCGGGSC-CCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCE
T ss_pred HHHHHHHhcCCCccCCCCCCC-cceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEE
Confidence 9999999 9998 6889888 899999999999999999999999999899999999999999999981 13 69999
Q ss_pred EEEEeC-C-eEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc-cccccccCcCCcceEEEEccccc
Q psy10349 224 VEFMKN-N-KKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ-VGENLQEHPAFASLAFTVNQKVG 300 (517)
Q Consensus 224 V~~~~~-g-~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp-VG~nl~dH~~~~~~~~~~~~~~~ 300 (517)
|+|... | +.++++|+||||||||||+||||||+|||||+++|+++||++++||| ||+|||||+.+ .+.|.++....
T Consensus 249 Ve~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~-~~~~~~~~~~~ 327 (566)
T 3fim_B 249 VEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL-PAAFFVNSNQT 327 (566)
T ss_dssp EEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE-CCEEEESCSCS
T ss_pred EEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc-eEEEEeCCCcc
Confidence 999863 6 88999999999999999999999999999999999999999999999 99999999997 67787765433
Q ss_pred cchhhhhh-hHHHHHHHHh--ccCC-cccCCccceEEEEecCCCC----------CCCCCCCeeEEeecccchhhhhccc
Q psy10349 301 LVSDRIFS-NLAKETIKAF--TNQG-WTTTLGCEGLGYVRTKYNN----------YPPGVPDIEYIFVPASLAIEEEKGG 366 (517)
Q Consensus 301 ~~~~~~~~-~~~~~~~~~~--~~~G-~~~~~~~~~~~~~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~~~~g 366 (517)
.. ..+.. ........+| .++| ++ ....+..+|+++.... .....|++++++.+.....
T Consensus 328 ~~-~~~~~~~~~~~~~~~~~~~~~G~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~~------ 399 (566)
T 3fim_B 328 FD-NIFRDSSEFNVDLDQWTNTRTGPLT-ALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFHP------ 399 (566)
T ss_dssp SG-GGGTCHHHHHHHHHHHHHHSCSGGG-CCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESSCCCT------
T ss_pred cc-hhhcChHHHHHHHHHHHhcCCCCcc-cChhhheeeeccccchhhhhhhccccccCCCCCEEEEecccchhh------
Confidence 21 00110 1112455677 7889 87 4556778898764210 1124578887654321100
Q ss_pred hhhhhhcCCChhhHHhhhcccCCCCeEEEeeeccccCceeEEEccCCCCCCCceEecCCCCChhhHHHHHHHHHHHHHHh
Q psy10349 367 SLLRKTMGIPDRTFKELFRDVKNKDAWSIWPMLMYPESRGYVRLKSADPMVYPAVQSNFFQDPLDLLRIVEGIKMVIELS 446 (517)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~ 446 (517)
.+.......++++.+++++|+|||+|+|+|+||++.|+|++|||++|.|++.|+++++.+++++
T Consensus 400 ----------------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~ 463 (566)
T 3fim_B 400 ----------------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFL 463 (566)
T ss_dssp ----------------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred ----------------cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHH
Confidence 0001112357888888999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhhhhccccccCCCCcCCCCCCHHHHHHHHHhcCCCCcccccccccccCCCCCCccCCCCeeeccC
Q psy10349 447 KTNAFQKYKSKLSTRILPACKKHKYGSDDYWGCCVRQLTMQMHHQCGTCKMGPDGDRTAVVDPRLRVHGIK 517 (517)
Q Consensus 447 ~~~~~~~~~~~~~~~~~p~~~~~~~~s~~~~~~~i~~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~ 517 (517)
++++++++...+. .|++ ....+|++|++|||+...+.||++||||||+++++++|||++||||||+
T Consensus 464 ~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~ 529 (566)
T 3fim_B 464 SGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVD 529 (566)
T ss_dssp TSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCB
T ss_pred hCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCC
Confidence 9999998765443 4542 1357899999999999999999999999998766569999999999985
|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... | Back alignment and structure |
|---|
| >4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* | Back alignment and structure |
|---|
| >1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 | Back alignment and structure |
|---|
| >1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* | Back alignment and structure |
|---|
| >1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* | Back alignment and structure |
|---|
| >2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... | Back alignment and structure |
|---|
| >2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* | Back alignment and structure |
|---|
| >3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
| >2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* | Back alignment and structure |
|---|
| >1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* | Back alignment and structure |
|---|
| >3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A* | Back alignment and structure |
|---|
| >1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* | Back alignment and structure |
|---|
| >1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A* | Back alignment and structure |
|---|
| >2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* | Back alignment and structure |
|---|
| >3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* | Back alignment and structure |
|---|
| >1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* | Back alignment and structure |
|---|
| >2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* | Back alignment and structure |
|---|
| >3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} | Back alignment and structure |
|---|
| >3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* | Back alignment and structure |
|---|
| >2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} | Back alignment and structure |
|---|
| >2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* | Back alignment and structure |
|---|
| >3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* | Back alignment and structure |
|---|
| >4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} | Back alignment and structure |
|---|
| >3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* | Back alignment and structure |
|---|
| >1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 | Back alignment and structure |
|---|
| >3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 | Back alignment and structure |
|---|
| >3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} | Back alignment and structure |
|---|
| >3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* | Back alignment and structure |
|---|
| >3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* | Back alignment and structure |
|---|
| >2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* | Back alignment and structure |
|---|
| >3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* | Back alignment and structure |
|---|
| >3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* | Back alignment and structure |
|---|
| >3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* | Back alignment and structure |
|---|
| >3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A | Back alignment and structure |
|---|
| >3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} | Back alignment and structure |
|---|
| >1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* | Back alignment and structure |
|---|
| >3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 | Back alignment and structure |
|---|
| >3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 517 | ||||
| d1gpea1 | 391 | c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic | 5e-59 | |
| d1cf3a1 | 385 | c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper | 4e-55 | |
| d1ju2a1 | 351 | c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { | 5e-50 | |
| d2f5va1 | 379 | c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W | 1e-45 | |
| d3coxa1 | 370 | c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of | 5e-39 | |
| d1n4wa1 | 367 | c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of | 3e-37 | |
| d1kdga1 | 360 | c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain | 2e-30 | |
| d1cf3a2 | 196 | d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus | 1e-24 | |
| d1gpea2 | 196 | d.16.1.1 (A:329-524) Glucose oxidase {Penicillium | 1e-24 | |
| d1ju2a2 | 170 | d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond | 2e-16 | |
| d1kdga2 | 181 | d.16.1.1 (A:513-693) Flavoprotein domain of flavoc | 2e-13 |
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Score = 198 bits (503), Expect = 5e-59
Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 27/307 (8%)
Query: 1 GCVVTNRLTENPDWKVLLLEAG---DEENALTDIPETAHYLQFTKFNWNFTTEFQPGACR 57
G V +LTENP KVL++E G + A+ + P + T + N+ T
Sbjct: 36 GLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVPL----- 90
Query: 58 GLNNERCPWPAGRAVGGASVINNNIYTRGNPNDFD-RWLEAGNVGWGYKDVLPYFKKSED 116
+NN AG+ +GG+++IN + +TR + D G GW + ++ Y KK+E
Sbjct: 91 -INNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEA 149
Query: 117 IDVPELKR--------SEYHGVGGYLNV---DYSPYKSKLMDAFLESAPEVGLNLTDYNS 165
P + + HG G + D S +M A + + +G+ +
Sbjct: 150 ARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFL 209
Query: 166 -PDGNVGFSRIQGTIQFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPNT--KRVF 222
+ + R A++A+L P +R N ++ V KVL +
Sbjct: 210 CGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAV 269
Query: 223 GVEFMKNNKKRV-VYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADL--QVG 279
GV F N V+AK EV+L+AG+ SP +L SGIG + L+Q N+ L DL +
Sbjct: 270 GVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGIC 329
Query: 280 ENLQEHP 286
+
Sbjct: 330 SMMSREL 336
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 196 | Back information, alignment and structure |
|---|
| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 196 | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 170 | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 181 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 517 | |||
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1ju2a1 | 351 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 99.97 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 99.89 | |
| d1kdga2 | 181 | Flavoprotein domain of flavocytochrome cellobiose | 99.84 | |
| d1gpea2 | 196 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 99.8 | |
| d1cf3a2 | 196 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 99.79 | |
| d1ju2a2 | 170 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 99.78 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 98.8 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 98.66 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 98.46 | |
| d1kf6a2 | 311 | Fumarate reductase {Escherichia coli [TaxId: 562]} | 98.12 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 98.06 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 97.79 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 97.64 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 97.49 | |
| d1chua2 | 305 | L-aspartate oxidase {Escherichia coli [TaxId: 562] | 97.39 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 97.32 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 97.18 | |
| d1neka2 | 330 | Succinate dehydogenase {Escherichia coli [TaxId: 5 | 96.67 | |
| d2f5va2 | 198 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 96.22 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 95.23 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.14 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.8 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.25 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 90.81 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 89.95 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 89.46 | |
| d2cula1 | 230 | GidA-related protein TTHA1897 {Thermus thermophilu | 88.68 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.34 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 87.64 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 87.37 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 87.33 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 84.22 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 83.08 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 83.03 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 81.62 |
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=4.4e-57 Score=463.58 Aligned_cols=281 Identities=30% Similarity=0.453 Sum_probs=242.1
Q ss_pred CchhccccccCCCCeEEEEcccCCCCC---CcccccccccccCCCccceEeeeeccCcccCCCCceeeccCCcccchhhh
Q psy10349 1 GCVVTNRLTENPDWKVLLLEAGDEENA---LTDIPETAHYLQFTKFNWNFTTEFQPGACRGLNNERCPWPAGRAVGGASV 77 (517)
Q Consensus 1 G~v~A~rLae~~g~~VlvlEaG~~~~~---~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~ 77 (517)
||++|.||||+++.||||||||+.... ..++|..+..++.+.+||+|.++|+. +++.+.|++||+|||||+
T Consensus 36 G~vlA~rLae~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~------~~r~~~~~~G~~lGGsS~ 109 (391)
T d1gpea1 36 GLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVPLI------NNRTNNIKAGKGLGGSTL 109 (391)
T ss_dssp HHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCCCT------TSCCCEECCBCSTTGGGG
T ss_pred HHHHHHHHHHCCCCeEEEEcCCCCCCCCCceeeCHHHHHHhhCCCcccCceeeecC------CCcEeeeceeeccCcccc
Confidence 789999999966689999999986543 23567777777778899999998864 678899999999999999
Q ss_pred hcceeeecCChhhHHHHHHh-CCCCCCccchHHHHHhhccCCCCCC--------CCCCcccCCCceEeecCC---CCChh
Q psy10349 78 INNNIYTRGNPNDFDRWLEA-GNVGWGYKDVLPYFKKSEDIDVPEL--------KRSEYHGVGGYLNVDYSP---YKSKL 145 (517)
Q Consensus 78 ~n~~~~~r~~~~df~~w~~~-g~~~W~~~~l~py~~~~e~~~~~~~--------~~~~~~g~~g~~~~~~~~---~~~~~ 145 (517)
||+|+|+|+++.||+.|... |+++|+|++++|||+|+|++..+.. .+..+||..|++++.... ...++
T Consensus 110 in~~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~p~ 189 (391)
T d1gpea1 110 INGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPI 189 (391)
T ss_dssp TSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCBCTH
T ss_pred eeeeEEeeccccccccccccCCCCccccchhHHHHHHhhhccCCcchhcccccCccccccCCCCcccccccccccccCHH
Confidence 99999999999999999886 8899999999999999999876532 245689999999887543 34678
Q ss_pred HHHHHHHHHHcCCCC-CCCCCCCCCcccccccccc-cCCcccchhhhhhcccCCCCCeEEEcCcEEEEEEecCC--CCeE
Q psy10349 146 MDAFLESAPEVGLNL-TDYNSPDGNVGFSRIQGTI-QFGRRFSASQAFLRPIVERPNFHVMKKARVLKVLIDPN--TKRV 221 (517)
Q Consensus 146 ~~~~~~a~~~~G~~~-~d~~~~~~~~g~~~~~~~~-~~g~r~s~~~~~l~~~~~~~nl~i~~~~~V~ri~~~~~--~~~a 221 (517)
.+.|.++++++|++. .+++.+. +.+++.+..++ ..+.|.+++.+++.+...|+|++|++++.|+||+|+++ +.||
T Consensus 190 ~~~~~~a~~~~G~~~~~~~~~g~-~~~~~~~~~~~~~~~~r~s~a~~~~~p~~~r~nl~i~t~a~V~rIl~~~~~~g~ra 268 (391)
T d1gpea1 190 MKALMNTVSALGVPVQQDFLCGH-PRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQA 268 (391)
T ss_dssp HHHHHHHHHHTTCCBSCCTTSSC-CCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHhcCCceeeccccCc-ccccccccceeeccccccchhhhccCccccchhhhhhccceeeEEeeeCCCCCceE
Confidence 899999999999998 5677766 65655544443 45678888999999999999999999999999999742 3589
Q ss_pred EEEEEEe-CCeEEEEEecceEEEecCCcCcHHHHHHcCCCChhhhhhCCCCeeeeCc--cccccccCcCC
Q psy10349 222 FGVEFMK-NNKKRVVYAKKEVVLSAGAFFSPHLLLLSGIGPREQLEQFNIPVLADLQ--VGENLQEHPAF 288 (517)
Q Consensus 222 ~gV~~~~-~g~~~~v~a~keVIlaaGai~tp~lLl~SGIGp~~~L~~~GI~~~~dlp--VG~nl~dH~~~ 288 (517)
+||+|.. ++..++++|+||||||||||+||+|||+|||||+++|+++||++++||| ||+|||||+..
T Consensus 269 ~GV~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~v~dlP~Gvg~nl~dh~~~ 338 (391)
T d1gpea1 269 VGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMSRELGG 338 (391)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCTCBSCGGGTC
T ss_pred EeeEEecCCCeEEEEEeCCEEEEecchhcchHHHHhcCCCcHHHHHHCCCCEEEECCcccccccccCccc
Confidence 9999975 7888999999999999999999999999999999999999999999998 99999999874
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|