Diaphorina citri psyllid: psy10392

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---
MLAIEGIPIFYLELAIGQRLRKGAIGVWNHVSPYLVGIGIASAVVSFNVALYYNTVIAWCLFYFAQSFRAQLPWAECPTRVFPNGSSLVEPECLASTPTEYFWYRTTLDISPSIDEPNGFNWQIAFALVLAWTVVYLCMMKGIASSPFVVYVTSMFPYMVLIVFFLRGITLPGMSHGLSHLFTPKWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIETASLRLGEVHWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSTFAAIVIFAIIERTGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIGFKATNVYERCLQTRNAMLALDPHDSKNVPECSLEKELENRFDSQTYLTFDISLAREIAFSKGIFRLVSFLFKVLQPDK
cEEEEcHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHcccccccHccccEEEccccccccccHHHHHHHHHHHHHHHcccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEcccccHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccHHHHHcccccccEEEEccccccEEEEHHHHHHHHHHHHHcccccc
MLAIEGIPIFYLELAIGQRLRKGAIGVWNHVSPYLVGIGIASAVVSFNVALYYNTVIAWCLFYFAQSFRAQLPWAECPTRVFPNGSSLVEPECLASTPTEYFWYRTTLDISPSIDEPNGFNWQIAFALVLAWTVVYLCMMKGIASSPFVVYVTSMFPYMVLIVFFLRGITLPGMSHGLSHLFTPKWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIETASLRLGEVHWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSTFAAIVIFAIIERTGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIGFKATNVYERCLQTRNAMLALDPHDSKNVPECSLEKELENRFDSQTYLTFDISLAREIAFSKGIFRLVSFLFKVLQPD*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MLAIEGIPIFYLELAIGQRLRKGAIGVWNHVSPYLVGIGIASAVVSFNVALYYNTVIAWCLFYFAQSFRAQLPWAECPTRVFPNGSSLVEPECLASTPTEYFWYRTTLDISPSIDEPNGFNWQIAFALVLAWTVVYLCMMKGIASSPFVVYVTSMFPYMVLIVFFLRGITLPGMSHGLSHLFTPKWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIETASLRLGEVHWYMLKEPHVWLEAGTQIFFSLGLAFGGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSTFAAIVIFAIIERTGLIAYSSYNPVDNNCYRDAFIVSFTNCCTSMFAAIVIFAIIGFKATNVYERCLQTRNAMLALDPHDSKNVPECSLEKELENRFDSQTYLTFDISLAREIAFSKGIFRLVSFLFKVLQPDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sodium-dependent neutral amino acid transporter SLC6A17 Functions as a sodium-dependent vesicular transporter selective for proline, glycine, leucine and alanine. In contrast to other members of this neurotransmitter transporter family, does not appear to be chloride-dependent.confidentP31662
Sodium-dependent neutral amino acid transporter B(0)AT2 Functions as a sodium-dependent neutral amino acid transporter. Exhibits preference for methionine and for the branched-chain amino acids, particularly leucine, valine and isoleucine. Mediates the saturable, pH-sensitive and electrogenic cotransport of proline and sodium ions with a stoichiometry of 1:1. May have a role as transporter for neurotransmitter precursors into neurons. In contrast to other members of the neurotransmitter transporter family, does not appear to be chloride-dependent.confidentQ8BG16
Sodium-dependent neutral amino acid transporter SLC6A17 Functions as a sodium-dependent vesicular transporter selective for proline, glycine, leucine and alanine. In contrast to other members of this neurotransmitter transporter family, does not appear to be chloride-dependent.confidentQ9H1V8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0001504 [BP]neurotransmitter uptakeprobableGO:0019226, GO:0035637, GO:0007268, GO:0023052, GO:0001505, GO:0044699, GO:0065007, GO:0065008, GO:0032501, GO:0050877, GO:0006810, GO:0044765, GO:0044763, GO:0006836, GO:0007267, GO:0007154, GO:0051234, GO:0051179, GO:0003008, GO:0044700, GO:0044707, GO:0008150, GO:0009987
GO:0008021 [CC]synaptic vesicleprobableGO:0043227, GO:0005737, GO:0043231, GO:0016023, GO:0031410, GO:0044444, GO:0044464, GO:0031982, GO:0005623, GO:0031988, GO:0005575, GO:0043229, GO:0044456, GO:0045202, GO:0044424, GO:0005622, GO:0030135, GO:0043226, GO:0030136
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0015816 [BP]glycine transportprobableGO:0071705, GO:0006810, GO:0006820, GO:0071702, GO:0006812, GO:0006811, GO:0006865, GO:0015711, GO:0015804, GO:0044765, GO:0015807, GO:0008150, GO:0015849, GO:0051234, GO:0051179, GO:0044699, GO:0046942
GO:0032328 [BP]alanine transportprobableGO:0071705, GO:0006810, GO:0006820, GO:0071702, GO:0006812, GO:0006811, GO:0006865, GO:0015711, GO:0015804, GO:0044765, GO:0008150, GO:0015849, GO:0051234, GO:0051179, GO:0044699, GO:0046942
GO:0006837 [BP]serotonin transportprobableGO:0015844, GO:0006812, GO:0006811, GO:0006810, GO:0071705, GO:0044765, GO:0015695, GO:0015837, GO:0071702, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0015820 [BP]leucine transportprobableGO:0071705, GO:0006810, GO:0006820, GO:0071702, GO:0006812, GO:0006811, GO:0006865, GO:0015711, GO:0015804, GO:0044765, GO:0008150, GO:0015849, GO:0015803, GO:0051234, GO:0051179, GO:0044699, GO:0046942
GO:1901700 [BP]response to oxygen-containing compoundprobableGO:0042221, GO:0050896, GO:0008150
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0035725 [BP]sodium ion transmembrane transportprobableGO:0009987, GO:0051234, GO:0006812, GO:0006811, GO:0006810, GO:0055085, GO:0008150, GO:0034220, GO:0044765, GO:0030001, GO:0044763, GO:0051179, GO:0006814, GO:0015672, GO:0044699
GO:0008504 [MF]monoamine transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0022857, GO:0003674, GO:0022804
GO:0030424 [CC]axonprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0010243 [BP]response to organic nitrogenprobableGO:0009719, GO:0050896, GO:1901698, GO:0008150, GO:0042221, GO:0010033
GO:0014070 [BP]response to organic cyclic compoundprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:1901618 [MF]organic hydroxy compound transmembrane transporter activityprobableGO:0005215, GO:0022857, GO:0003674
GO:0005298 [MF]proline:sodium symporter activityprobableGO:0005342, GO:0005343, GO:0003674, GO:0005416, GO:0015081, GO:0008509, GO:0022857, GO:0015370, GO:0046873, GO:0022804, GO:0015294, GO:0015291, GO:0015293, GO:0005215, GO:0008324, GO:0015193, GO:0046943, GO:0022891, GO:0022890, GO:0022892, GO:0005283, GO:0015075, GO:0008514, GO:0015077, GO:0015179, GO:0015175, GO:0015171
GO:0005332 [MF]gamma-aminobutyric acid:sodium symporter activityprobableGO:0005342, GO:0005343, GO:0008028, GO:0003674, GO:0015185, GO:0005416, GO:0015081, GO:0008509, GO:0022857, GO:0015370, GO:0046873, GO:0022804, GO:0015294, GO:0015291, GO:0015293, GO:0005215, GO:0008324, GO:0046943, GO:0022891, GO:0022890, GO:0022892, GO:0005283, GO:0015075, GO:0008514, GO:0015077, GO:0015171
GO:0035524 [BP]proline transmembrane transportprobableGO:0006865, GO:0006820, GO:0015849, GO:0044699, GO:0055085, GO:0071705, GO:0071702, GO:0009987, GO:0006812, GO:0006811, GO:0006810, GO:0015711, GO:0015804, GO:0034220, GO:0044765, GO:0044763, GO:0015824, GO:0051234, GO:0051179, GO:0046942, GO:0003333, GO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2A65, chain A
Confidence level:very confident
Coverage over the Query: 2-80,92-255
View the alignment between query and template
View the model in PyMOL
Template: 2A65, chain A
Confidence level:very confident
Coverage over the Query: 261-337,374-378,410-435
View the alignment between query and template
View the model in PyMOL