Diaphorina citri psyllid: psy10448

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000-
MFPGAKDIDLAIQRGHWEHRRYDRDREEEKKEKEEARIYGQMARQILLALFLGTGDRYLQTSSPKSPSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEEEQPENTEIIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDFDEKNDGDLTGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNPSSARESALH
ccccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEccHHHHHHccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHcccccccEEEEEEEEEcccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccccccccccccccccccccccEEEEEccHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHccccccEEEEccccccccHHHHHHHHccccccccccHHHHHHHHccccHHHHHHHHHHHHccHHHcccHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccHHccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHcccccccEEEEEEccccccccccccccEEEEEccccccccHHHHHHHHHHHccccccccccccccCEEEcccccccccHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHHccccccccccccccccHHcccccHHHHHHHHHccccccccccccccccc
****AKDIDLAIQRGH*********************IYGQMARQILLALFLGTGDRY*************DFTSFLEVYHPQLLKSYMKKMNNDFTEPPALE*********************ELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFY*********************************************YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR*****RIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGM*G**ANFTKQELDDILRFGTE***********************DPAYWVKLLRHHY****************VRKQTDDENDDDDFDEKND**************************LARVGGNIEVLNQLE********************************************************
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MFPGAKDIDLAIQRGHWEHRRYDRDREEEKKEKEEARIYGQMARQILLALFLGTGDRYLQTSSPKSPSQNLDFTSFLEVYHPQLLKSYMKKMNNDFTEPPALEEPLDEEDKRMARLNRHNINDEELEKKYYRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRGGKPCRIRSSTVKFHVLLTSYELITNDVALLGSIEWAVLVVDEAHRLKSNQSKFFKFLSGYSIQNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTSFQAEFADISKEEQVKRLHDLLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAAEEAPVQGGQYEIQALTRAAGKLVLLSKMLKKLKEDGHRYGIKPEWLIANRVINSKTLRDGSTIYLVKWRDLPYDKATWEDENEDIPGLKESIEFYNMTKMLDILEDYLDGEGYKYERIDGNITGSMRQESIDRFNAPGASQFVFLLSTRSGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKYINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKQANFTKQELDDILRFGTEELFKEEEEQPENTEIIKQEAENQDPAYWVKLLRHHYEQHQEDVSRTLGKGKRVRKQTDDENDDDDFDEKNDGDLTGRRSAKKKEMSKQERDRPLPPLLARVGGNIEVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLHMSERSILSRLAATSTSTNPSSARESALH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chromodomain-helicase-DNA-binding protein Mi-2 homolog Vital role in development. Protein binds to a portion of Hunchback (HB) protein that is critical for repression of bithorax complex (BXC) genes. May also function in polycomb group (PcG) repression of Hox genes.confidentO97159
Chromodomain-helicase-DNA-binding protein 3 homolog Chromatin-remodeling protein that function in vulval cell fate determination.confidentQ22516
Chromodomain-helicase-DNA-binding protein 3 Component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin by deacetylating histones. Required for anchoring centrosomal pericentrin in both interphase and mitosis, for spindle organization and centrosome integrity.confidentQ12873

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051297 [BP]centrosome organizationprobableGO:0006996, GO:0031023, GO:0007010, GO:0009987, GO:0016043, GO:0008150, GO:0007017, GO:0044763, GO:0071840, GO:0000226, GO:0044699
GO:0007051 [BP]spindle organizationprobableGO:0006996, GO:0007017, GO:0007010, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0016043, GO:0008150, GO:0000226, GO:0022402, GO:0044699, GO:0044763, GO:0007049
GO:0000977 [MF]RNA polymerase II regulatory region sequence-specific DNA bindingprobableGO:0043565, GO:0044212, GO:0001067, GO:0003677, GO:0001012, GO:0000976, GO:0005488, GO:0003676, GO:0000975, GO:0003674, GO:0097159, GO:1901363
GO:0031491 [MF]nucleosome bindingprobableGO:0003682, GO:0003674, GO:0005488
GO:0000122 [BP]negative regulation of transcription from RNA polymerase II promoterprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0006357, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0045892, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0008150, GO:0010558, GO:0048523
GO:0042766 [BP]nucleosome mobilizationprobableGO:0034728, GO:0071824, GO:0044699, GO:0051276, GO:0006338, GO:0006325, GO:0009987, GO:0016043, GO:0043933, GO:0044763, GO:0071840, GO:0006996, GO:0008150, GO:0016568
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0045111 [CC]intermediate filament cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0032502 [BP]developmental processprobableGO:0008150
GO:0008094 [MF]DNA-dependent ATPase activityprobableGO:0016787, GO:0016818, GO:0042623, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0016887
GO:0070615 [MF]nucleosome-dependent ATPase activityprobableGO:0016787, GO:0016818, GO:0042623, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0016887
GO:0005700 [CC]polytene chromosomeprobableGO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0005694, GO:0043226
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0016581 [CC]NuRD complexprobableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0070603, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0017053, GO:0000118, GO:0090545, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.12DNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MWY, chain W
Confidence level:very confident
Coverage over the Query: 136-348,362-516,527-590,643-723,761-805,817-840
View the alignment between query and template
View the model in PyMOL
Template: 2B2Y, chain A
Confidence level:very confident
Coverage over the Query: 79-193
View the alignment between query and template
View the model in PyMOL
Template: 4A2W, chain A
Confidence level:very confident
Coverage over the Query: 248-340,361-439,464-661,688-728,777-809
View the alignment between query and template
View the model in PyMOL
Template: 4DDU, chain A
Confidence level:confident
Coverage over the Query: 245-344,361-434,452-453,469-499,570-587,640-804
View the alignment between query and template
View the model in PyMOL