Diaphorina citri psyllid: psy10480

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----
MMCSGSCQKDKSKDVEFVCPDEGGNGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTTPAPITEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRVVMGL
cccccccccccccccccccccccccccccccccccccEEEccccCEEEccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHHHHHccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccCEECcccccccccHHHHHHcccEECccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccCEEEcccccccccHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccccEEEEcc
****************FVC**EGGNGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTTPAPITEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRVVMGL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMCSGSCQKDKSKDVEFVCPDEGGNGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTTPAPITEAPTDLATRCDKSSCTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYDHYQKVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQNLANRGHEIGVETISLQDGLQDKGYEEWVGEMIGMREILHHFANITRSDIVGMRAPFLLPGRNTQFEDFGFIYDSSVSVPALKFPVWPYTLDHKIPHECKSGTCPTKSFPGVWEVPLNAHFVESYEGGHCPYLDQCVLHNHDSDEVLEWLKEDFNKYYTQNKAPYMMPFHTNWFQIKELEQGLHKFLDWAAQKPDVWFVTITQALTWMTNPKSSKELLNYDAWKCAKSETAPLEACNLPNKCALGFRPPEANISATRVVMGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfer were detected in SWISS-PROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699
GO:0008061 [MF]chitin bindingprobableGO:0097367, GO:0003674, GO:0005488
GO:0006030 [BP]chitin metabolic processprobableGO:1901564, GO:0006040, GO:1901135, GO:0043170, GO:0071704, GO:0006807, GO:0008150, GO:0008152, GO:0006022, GO:1901071
GO:0005576 [CC]extracellular regionprobableGO:0005575
GO:0005975 [BP]carbohydrate metabolic processprobableGO:0044238, GO:0008150, GO:0008152, GO:0071704
GO:0016810 [MF]hydrolase activity, acting on carbon-nitrogen (but not peptide) bondsprobableGO:0016787, GO:0003674, GO:0003824

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QBU, chain A
Confidence level:very confident
Coverage over the Query: 135-387
View the alignment between query and template
View the model in PyMOL
Template: 1DQC, chain A
Confidence level:confident
Coverage over the Query: 14-76
View the alignment between query and template
View the model in PyMOL
Template: 2W3Z, chain A
Confidence level:confident
Coverage over the Query: 96-247,259-266,291-374
View the alignment between query and template
View the model in PyMOL