Diaphorina citri psyllid: psy10533


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590----
MSLGNMYCSRCNEGFEPEEKIVNSNGELWHQQCFVCAQCFRPFPGGIFYEFEGRKYCEHDFHVLFAPCCGNGCPSLSTFAISLAGEISGWYPPCLKITMSLGNMYCFPLQRRFRARGEDRQTLTGGAWHQQCFVCAQCFRPFPGGIFYEFEGEFVIGRVIKAMNANWHPKCFRCEHCSKELADLGFIRSQGRALCHECNAQAKAVGFGKHMCHKCHGLIDDKPLKFRGEVYHPYHFNCTSCGTELNSDAREVKSRPGYTANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQVIGGDESHYITSRELTYKKGLGYCESHYHQLFGNLCFVCNQVIGGDLFTALNKAWCVHHFACSTLGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQNHTISLHVSSREAVLSSDSSVFGLRHYEKKGLAYCETHYHQLFGNLCFVCNQDHTISRHVSSRESVLSSDSSVFGLRHYEKNGLAYCETHYHQLFGNLCFVCNQVIGGDPGTVKTNLVDARSRVRFPSWATFILIR
ccccccccccccccccccccEEEEccccccccccccccccccccccccEEEccCCccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccEEEccEEEEccccccccccccccccccccccccEEcccccccHHHHHHHHHcccccccccccccccccccEEEccccccccccccccccccccccccEECccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccECcccccccHHHHHHHcccccccccccCCccccEECccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccEECccccccHHHHHHHccccccccccCECcccEEcccccCCccccccccccEEEEccEEEccccHHcccccccccccccEEcccEEEEcccccccccccccccCEECccEEccHHHHHHHccccccccccccccccEEEEECccccccccccccccEEEECc
*SLGNMYCSRCNEGFEPEEKIVNSNGELWHQQCFVCAQCFRPFPGGIFYEFEGRKYCEHDFHVLFAPCCGNGCPSLSTFAISLAGEISGWYPPCLKITMSLGNMYCFPLQRRFRARGEDRQTLTGGAWHQQCFVCAQCFRPFPGGIFYEFEGEFVIGRVIKAMNANWHPKCFRCEHCSKELADLGFIRSQGRALCHECNAQAKAVGFGKHMCHKCHGLIDDKPLKFRGEVYHPYHFNCTSCGTELNSDAREVKSRPGYTANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQVIGGDESHYITSRELTYKKGLGYCESHYHQLFGNLCFVCNQVIGGDLFTALNKAWCVHHFACSTLGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQNHTISLHVSSREAVLSSDSSVFGLRHYEKKGLAYCETHYHQLFGNLCFVCNQDHTISRHVSSRESVLSSDSSVFGLRHYEKNGLAYCETHYHQLFGNLCFVCNQVIGGDPGTVKTNLVDARSRVRFPSWATFILIR
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MSLGNMYCSRCNEGFEPEEKIVNSNGELWHQQCFVCAQCFRPFPGGIFYEFEGRKYCEHDFHVLFAPCCGNGCPSLSTFAISLAGEISGWYPPCLKITMSLGNMYCFPLQRRFRARGEDRQTLTGGAWHQQCFVCAQCFRPFPGGIFYEFEGEFVIGRVIKAMNANWHPKCFRCEHCSKELADLGFIRSQGRALCHECNAQAKAVGFGKHMCHKCHGLIDDKPLKFRGEVYHPYHFNCTSCGTELNSDAREVKSRPGYTANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQVIGGDESHYITSRELTYKKGLGYCESHYHQLFGNLCFVCNQVIGGDLFTALNKAWCVHHFACSTLGKHWHVEHFVCARCEKPFLGHRHYEKKGLAYCETHYHQLFGNLCFVCNQNHTISLHVSSREAVLSSDSSVFGLRHYEKKGLAYCETHYHQLFGNLCFVCNQDHTISRHVSSRESVLSSDSSVFGLRHYEKNGLAYCETHYHQLFGNLCFVCNQVIGGDPGTVKTNLVDARSRVRFPSWATFILIR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
LIM and senescent cell antigen-like-containing domain protein 2 Competes with LIMS1 for binding to ILK. Plays a role in modulating cell spreading and migration.confidentQ91XD2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031252 [CC]cell leading edgeprobableGO:0005575, GO:0044464, GO:0005623
GO:0045216 [BP]cell-cell junction organizationprobableGO:0034330, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:2001046 [BP]positive regulation of integrin-mediated signaling pathwayprobableGO:0048584, GO:0009966, GO:0009967, GO:2001044, GO:0048583, GO:0050794, GO:0023056, GO:0065007, GO:0023051, GO:0048518, GO:0008150, GO:0010647, GO:0010646, GO:0050789, GO:0048522
GO:0007475 [BP]apposition of dorsal and ventral imaginal disc-derived wing surfacesprobableGO:0048563, GO:0048569, GO:0008587, GO:0009887, GO:0035220, GO:0009791, GO:0035120, GO:0002165, GO:0032501, GO:0009653, GO:0007275, GO:0044699, GO:0007472, GO:0007552, GO:0007476, GO:0048513, GO:0032502, GO:0048707, GO:0009886, GO:0035107, GO:0035114, GO:0008150, GO:0044767, GO:0044707, GO:0007444, GO:0048856, GO:0007560, GO:0048731, GO:0048736, GO:0048737
GO:0055120 [CC]striated muscle dense bodyprobableGO:0005737, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0008258 [BP]head involutionprobableGO:0048598, GO:0032502, GO:0001700, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0009653, GO:0007275, GO:0044699
GO:0046329 [BP]negative regulation of JNK cascadeprobableGO:0048585, GO:0048583, GO:0023057, GO:0010648, GO:0023051, GO:0046328, GO:0010646, GO:0010627, GO:0050789, GO:0043409, GO:0043408, GO:0009968, GO:0009966, GO:0065007, GO:0048519, GO:0010741, GO:0070302, GO:0070303, GO:0050794, GO:0032872, GO:0032873, GO:0008150, GO:0080134, GO:0080135, GO:0048523
GO:0005925 [CC]focal adhesionprobableGO:0070161, GO:0005575, GO:0005912, GO:0005924, GO:0030054, GO:0030055
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009880 [BP]embryonic pattern specificationprobableGO:0032502, GO:0007389, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0003008 [BP]system processprobableGO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0016337 [BP]cell-cell adhesionprobableGO:0009987, GO:0008150, GO:0007155, GO:0044763, GO:0022610, GO:0044699
GO:0014704 [CC]intercalated discprobableGO:0005575, GO:0044291, GO:0030054, GO:0005911
GO:0031430 [CC]M bandprobableGO:0005737, GO:0005575, GO:0043232, GO:0031672, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0030017, GO:0044444, GO:0043228, GO:0043292, GO:0044424, GO:0043226, GO:0044422, GO:0044449
GO:0022607 [BP]cellular component assemblyprobableGO:0044085, GO:0008150, GO:0071840, GO:0016043
GO:0008305 [CC]integrin complexprobableGO:0043234, GO:0043235, GO:0032991, GO:0044459, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005887, GO:0005886, GO:0044425, GO:0031226, GO:0031224
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0030018 [CC]Z discprobableGO:0005737, GO:0005575, GO:0043229, GO:0043232, GO:0044464, GO:0031674, GO:0005623, GO:0005622, GO:0030016, GO:0030017, GO:0044444, GO:0043228, GO:0043292, GO:0044424, GO:0043226, GO:0044422, GO:0044449
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523
GO:0007391 [BP]dorsal closureprobableGO:0048598, GO:0002009, GO:0001700, GO:0048856, GO:0044707, GO:0032501, GO:0060429, GO:0016331, GO:0009888, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0048729, GO:0009653, GO:0032502, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2JTN, chain A
Confidence level:very confident
Coverage over the Query: 190-253,264-335
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Template: 2JTN, chain A
Confidence level:very confident
Coverage over the Query: 274-349,389-414,428-449
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Template: 1NYP, chain A
Confidence level:very confident
Coverage over the Query: 3-68
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Template: 1RUT, chain X
Confidence level:very confident
Coverage over the Query: 376-415,428-462,481-513,532-554
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Template: 2RGT, chain A
Confidence level:very confident
Coverage over the Query: 6-71,138-145,157-204
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Template: 1B8T, chain A
Confidence level:very confident
Coverage over the Query: 277-414,429-448
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Template: 3IXE, chain B
Confidence level:probable
Coverage over the Query: 4-66
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