Psyllid ID: psy10555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYNPETN
Secondary Structure (PSIPRED)
cEEHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHcccccccccccHHHHHHHHHcccccccEEEccccccccHHHHHHHHHHccccHHHcccHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
TLWEIltfareqpyedfsdqrvVEHISHFsrstakhimlpqpincpkEIFDLMCECWqkhdsdrpnfrEIHLFLQrknlgynpetn
Flexible Loop (DISEMBL)
TLWEIltfareqpyedfsdqRVVEHISHFsrstakhimlpQPINCPKEIFDLMCECWQKHDSDRPNFREIHLflqrknlgynpetn
Low Complexity Region (SEG)
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYNPETN
Disordered region (IsUnstruct)
**WEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK*********
Disordered Region (DISOPRED)
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN*G******
Disordered Region (DISEMBL)
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYNPETN
Disordered Region (DISPRO)
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYNPETN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
Q62371	854	Discoidin domain-containi	yes	N/A	0.906	0.091	0.448	8e-17
Q16832	855	Discoidin domain-containi	yes	N/A	0.906	0.091	0.435	1e-16
Q7YR43	909	Epithelial discoidin doma	no	N/A	0.918	0.086	0.354	1e-13
Q08345	913	Epithelial discoidin doma	no	N/A	0.918	0.086	0.354	1e-13
Q63474	910	Epithelial discoidin doma	no	N/A	0.860	0.081	0.364	1e-13
Q03146	911	Epithelial discoidin doma	no	N/A	0.860	0.081	0.364	2e-13
Q8BYG9	1007	Ephrin type-A receptor 10	no	N/A	0.848	0.072	0.409	6e-12
Q07496	986	Ephrin type-A receptor 4	no	N/A	0.709	0.061	0.405	5e-10
Q03137	986	Ephrin type-A receptor 4	no	N/A	0.709	0.061	0.405	5e-10
Q91845	986	Ephrin type-A receptor 4-	N/A	N/A	0.860	0.075	0.380	5e-10

>sp|Q62371|DDR2_MOUSE Discoidin domain-containing receptor 2 OS=Mus musculus GN=Ddr2 PE=1 SV=2

 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE  TF +EQPY   SD++V+E+   F R   + I LPQP  CP  ++ LM  CW++ 
Sbjct: 775 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPDSVYKLMLSCWRRE 834

Query: 61  DSDRPNFREIHLFLQRKN 78
              RP+F+EIHL L ++ 
Sbjct: 835 TKHRPSFQEIHLLLLQQG 852

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|Q16832|DDR2_HUMAN Discoidin domain-containing receptor 2 OS=Homo sapiens GN=DDR2 PE=1 SV=2

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 49/78 (62%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE  TF +EQPY   SD++V+E+   F R   +   LPQP  CP  ++ LM  CW++ 
Sbjct: 776 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRD 835

Query: 61  DSDRPNFREIHLFLQRKN 78
             +RP+F+EIHL L ++ 
Sbjct: 836 TKNRPSFQEIHLLLLQQG 853

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q7YR43|DDR1_PANTR Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+L   R QP+   +D++V+E+   F R   + + L +P  CP+ +++LM  CW + 
Sbjct: 828 TLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRE 887

Query: 61  DSDRPNFREIHLFLQRKNL 79
              RP F ++H FL    L
Sbjct: 888 SEQRPPFSQLHRFLAEDAL 906

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q08345|DDR1_HUMAN Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+L   R QP+   +D++V+E+   F R   + + L +P  CP+ +++LM  CW + 
Sbjct: 832 TLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRE 891

Query: 61  DSDRPNFREIHLFLQRKNL 79
              RP F ++H FL    L
Sbjct: 892 SEQRPPFSQLHRFLAEDAL 910

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing (By similarity). Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q63474|DDR1_RAT Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 44/74 (59%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+L   R QP+   +D++V+E+   F R   + + L +P  CP+ +++LM  CW + 
Sbjct: 829 TLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWSRE 888

Query: 61  DSDRPNFREIHLFL 74
              RP F ++H FL
Sbjct: 889 PEQRPPFSQLHRFL 902

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q03146|DDR1_MOUSE Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 44/74 (59%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+L   R QP+   +D++V+E+   F R   + + L +P  CP+ +++LM  CW + 
Sbjct: 830 TLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWSRE 889

Query: 61  DSDRPNFREIHLFL 74
              RP F ++H FL
Sbjct: 890 PEQRPPFAQLHRFL 903

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing, but also tumor cell invasion. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Phosphorylates PTPN11 (By similarity). Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q8BYG9|EPHAA_MOUSE Ephrin type-A receptor 10 OS=Mus musculus GN=Epha10 PE=2 SV=2

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 10/83 (12%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++ F  E+PY D S Q V++ +    R       LP P NCP ++  LM ECWQK  
Sbjct: 835 MWEVMAFG-ERPYWDMSGQDVIKAVEDGFR-------LPPPRNCPSQLHRLMLECWQKDP 886

Query: 62  SDRPNFREIHLFLQRKNLGYNPE 84
           S+RP F +IH  L +  +G  PE
Sbjct: 887 SERPRFSQIHSILSK--MGQEPE 907

Receptor for members of the ephrin-A family. Binds to EFNA3, EFNA4 and EFNA5.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q07496|EPHA4_CHICK Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 814 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 865

Query: 62  SDRPNFREI 70
           SDRP F +I
Sbjct: 866 SDRPKFGQI 874

Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI-anchored ephrin-A and transmembrane ephrin-B ligands including EFNA1 and EFNB3. Upon activation by ephrin ligands, modulates cell morphology and integrin-dependent cell adhesion through regulation of the Rac, Rap and Rho GTPases activity. Plays an important role in the development of the nervous system controlling different steps of axonal guidance including the establishment of the corticospinal projections.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q03137|EPHA4_MOUSE Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 814 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 865

Query: 62  SDRPNFREI 70
           SDRP F +I
Sbjct: 866 SDRPKFGQI 874

Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI-anchored ephrin-A and transmembrane ephrin-B ligands including EFNA1 and EFNB3. Upon activation by ephrin ligands, modulates cell morphology and integrin-dependent cell adhesion through regulation of the Rac, Rap and Rho GTPases activity. Plays an important role in the development of the nervous system controlling different steps of axonal guidance including the establishment of the corticospinal projections. May also control the segregation of motor and sensory axons during neuromuscular circuit development. Beside its role in axonal guidance plays a role in synaptic plasticity. Activated by EFNA1 phosphorylates CDK5 at 'Tyr-15' which in turn phosphorylates NGEF regulating RHOA and dendritic spine morphogenesis. In the nervous system, plays also a role in repair after injury preventing axonal regeneration and in angiogenesis playing a role in central nervous system vascular formation. Additionally, its promiscuity makes it available to participate in a variety of cell-cell signaling regulating for instance the development of the thymic epithelium.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q91845|EPA4A_XENLA Ephrin type-A receptor 4-A OS=Xenopus laevis GN=epha4-a PE=2 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 10/84 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 813 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 864

Query: 62  SDRPNFREIHLFLQRKNLGYNPET 85
           SDRP F +I   L +  L  NP +
Sbjct: 865 SDRPKFGQIVSMLDK--LIRNPNS 886

Receptor tyrosine kinase which binds membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous, it has the unique property among Eph receptors to bind and to be physiologically activated by both GPI-anchored ephrin-A and transmembrane ephrin-B ligands including EFNA1 and EFNB3. Upon activation by ephrin ligands, modulates cell morphology and integrin-dependent cell adhesion through regulation of the Rac, Rap and Rho GTPases activity. Plays an important role in the development of the nervous system controlling different steps of axonal guidance including the establishment of the corticospinal projections.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
270003120	932	hypothetical protein TcasGA2_TC001551 [T	0.965	0.089	0.734	2e-33
242022568	953	Discoidin domain-containing receptor 2 p	0.965	0.087	0.686	2e-31
157130674	901	discoidin domain receptor [Aedes aegypti	1.0	0.095	0.662	6e-31
328700071	948	PREDICTED: discoidin domain-containing r	0.976	0.088	0.702	6e-31
158293523	114	AGAP008744-PA [Anopheles gambiae str. PE	1.0	0.754	0.674	9e-31
307171893	897	Discoidin domain-containing receptor 2 [	1.0	0.095	0.678	1e-30
170050310	105	discoidin domain receptor [Culex quinque	1.0	0.819	0.662	3e-30
195434585	238	GK14753 [Drosophila willistoni] gi|19416	0.988	0.357	0.670	1e-29
195116257	180	GI11510 [Drosophila mojavensis] gi|19391	0.988	0.472	0.670	1e-29
116007087	1064	discoidin domain receptor, isoform A [Dr	0.988	0.079	0.647	2e-29

>gi|270003120|gb|EEZ99567.1| hypothetical protein TcasGA2_TC001551 [Tribolium castaneum]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 61/83 (73%), Positives = 75/83 (90%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI+TFAREQP+E+ SD +V+E+++HF +   KH++L  PINCPKEIFDLMCECWQ+++
Sbjct: 848 LWEIMTFAREQPFEELSDDKVIENVTHFYQDDGKHVLLSPPINCPKEIFDLMCECWQRNE 907

Query: 62  SDRPNFREIHLFLQRKNLGYNPE 84
           SDRPNFREIHLFLQRKNLGYNPE
Sbjct: 908 SDRPNFREIHLFLQRKNLGYNPE 930

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022568|ref|XP_002431712.1| Discoidin domain-containing receptor 2 precursor, putative [Pediculus humanus corporis] gi|212517020|gb|EEB18974.1| Discoidin domain-containing receptor 2 precursor, putative [Pediculus humanus corporis]

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/83 (68%), Positives = 72/83 (86%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQPYE+  D++V+E++    + + K+++L QP NCPKEI+DLM ECWQ++
Sbjct: 870 TLWEILTFAREQPYEEMCDEKVIENVGLLYQDSGKNVLLHQPKNCPKEIYDLMKECWQRN 929

Query: 61  DSDRPNFREIHLFLQRKNLGYNP 83
           +SDRPNFREIHLFLQRKNLGYNP
Sbjct: 930 ESDRPNFREIHLFLQRKNLGYNP 952

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157130674|ref|XP_001661958.1| discoidin domain receptor [Aedes aegypti] gi|108881919|gb|EAT46144.1| AAEL002640-PA [Aedes aegypti]

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 72/86 (83%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQP+E+ SD++V+E+I H  +   KHI LP P+ CP+EI+DLMCECWQ++
Sbjct: 814 TLWEILTFAREQPFENLSDEKVIENIGHMYQDNKKHIQLPIPVGCPREIYDLMCECWQRN 873

Query: 61  DSDRPNFREIHLFLQRKNLGYNPETN 86
           ++ RPNFREIHLFLQRKNLGY P  +
Sbjct: 874 ENSRPNFREIHLFLQRKNLGYKPTAS 899

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328700071|ref|XP_003241141.1| PREDICTED: discoidin domain-containing receptor 2-like [Acyrthosiphon pisum]

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 70/84 (83%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQPYE+ SDQ V+++++   ++    I+LPQPINCPKEI+DLMCECWQ+ 
Sbjct: 862 TLWEILTFAREQPYEELSDQHVIDNVTRLYQNDGNFILLPQPINCPKEIYDLMCECWQRD 921

Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
           D  RPNFREI LFLQRKNLGY PE
Sbjct: 922 DKSRPNFREIQLFLQRKNLGYKPE 945

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293523|ref|XP_557898.3| AGAP008744-PA [Anopheles gambiae str. PEST] gi|157016748|gb|EAL40286.3| AGAP008744-PA [Anopheles gambiae str. PEST]

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 58/86 (67%), Positives = 72/86 (83%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQP+E+ SD +V+E+I H  +   KHI+LP P+ CP+EIFDLMCECWQ++
Sbjct: 28  TLWEILTFAREQPFENLSDDKVIENIGHMYQDNKKHILLPIPVGCPREIFDLMCECWQRN 87

Query: 61  DSDRPNFREIHLFLQRKNLGYNPETN 86
           ++ RPNFREIHLFLQRKNLGY P  +
Sbjct: 88  EASRPNFREIHLFLQRKNLGYKPNAS 113

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171893|gb|EFN63535.1| Discoidin domain-containing receptor 2 [Camponotus floridanus]

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/87 (67%), Positives = 73/87 (83%), Gaps = 1/87 (1%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQP+E+F D R+VE+ ++F +   + ++LP P NCPKEI+DLM ECWQ++
Sbjct: 809 TLWEILTFAREQPFEEFPDHRIVENATYFYQEDERRMILPLPKNCPKEIYDLMRECWQRN 868

Query: 61  DSDRPNFREIHLFLQRKNLGYNP-ETN 86
           D DRPNFREIHLFLQRKNLGY P E+N
Sbjct: 869 DVDRPNFREIHLFLQRKNLGYKPGESN 895

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170050310|ref|XP_001860645.1| discoidin domain receptor [Culex quinquefasciatus] gi|167871978|gb|EDS35361.1| discoidin domain receptor [Culex quinquefasciatus]

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 73/86 (84%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQP+E+ SD++V+E+I H  +   KH++LP P+ CP+EIFDLMCECWQ++
Sbjct: 18  TLWEILTFAREQPFENLSDEKVIENIGHMYQDNKKHMVLPIPVGCPREIFDLMCECWQRN 77

Query: 61  DSDRPNFREIHLFLQRKNLGYNPETN 86
           ++ RPNFREIHLFLQRKNLGY P  +
Sbjct: 78  ENSRPNFREIHLFLQRKNLGYRPSAS 103

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195434585|ref|XP_002065283.1| GK14753 [Drosophila willistoni] gi|194161368|gb|EDW76269.1| GK14753 [Drosophila willistoni]

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 69/85 (81%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEILTFAREQPYE  SD  V+E+I H  +    H +LP P+NCP+EI+DLMCECWQ++
Sbjct: 149 ALWEILTFAREQPYEHMSDANVIENIGHIYQDDKMHELLPMPVNCPREIYDLMCECWQRN 208

Query: 61  DSDRPNFREIHLFLQRKNLGYNPET 85
           +S RPNFREIHLFLQRKNLG+ P+T
Sbjct: 209 ESTRPNFREIHLFLQRKNLGFKPQT 233

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195116257|ref|XP_002002672.1| GI11510 [Drosophila mojavensis] gi|193913247|gb|EDW12114.1| GI11510 [Drosophila mojavensis]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 69/85 (81%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILTFAREQPYE  +D  V+E+I H  +    H +LP P+NCP+EI+DLMCECWQ++
Sbjct: 91  TLWEILTFAREQPYEHMTDANVIENIGHIYQDDKMHELLPMPLNCPREIYDLMCECWQRN 150

Query: 61  DSDRPNFREIHLFLQRKNLGYNPET 85
           +S RPNFREIHLFLQRKNLG+ P T
Sbjct: 151 ESSRPNFREIHLFLQRKNLGFKPNT 175

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|116007087|ref|NP_001014474.2| discoidin domain receptor, isoform A [Drosophila melanogaster] gi|113194960|gb|AAX52658.2| discoidin domain receptor, isoform A [Drosophila melanogaster]

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/85 (64%), Positives = 68/85 (80%)

Query: 2    LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
            LWEILTFAREQPYE  SD+ V+E+I    R    H +LP P NCP+EI+DLMCECWQ+ +
Sbjct: 976  LWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDE 1035

Query: 62   SDRPNFREIHLFLQRKNLGYNPETN 86
            S RP+FREIHL+LQRKNLG+ P+T+
Sbjct: 1036 SSRPSFREIHLYLQRKNLGFKPQTH 1060

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
FB|FBgn0053531	1064	Ddr "Discoidin domain receptor	0.988	0.079	0.647	2.2e-27
UNIPROTKB|E2RNZ4	866	DDR2 "Uncharacterized protein"	0.860	0.085	0.472	2.7e-16
MGI|MGI:1345277	854	Ddr2 "discoidin domain recepto	0.860	0.086	0.472	5.5e-16
ZFIN|ZDB-GENE-090316-2	868	ddr2a "discoidin domain recept	0.825	0.081	0.478	7.2e-16
UNIPROTKB|F1S212	872	DDR2 "Uncharacterized protein"	0.918	0.090	0.451	9.3e-16
UNIPROTKB|Q16832	855	DDR2 "Discoidin domain-contain	0.860	0.086	0.459	1.5e-15
UNIPROTKB|F1MIE0	855	DDR2 "Uncharacterized protein"	0.860	0.086	0.459	2.4e-15
ZFIN|ZDB-GENE-060503-361	845	ddr2b "discoidin domain recept	0.906	0.092	0.423	1.7e-14
UNIPROTKB|F1NG66	862	DDR2 "Uncharacterized protein"	0.872	0.087	0.426	1.7e-14
ZFIN|ZDB-GENE-041210-162	861	ddr2l "discoidin domain recept	0.872	0.087	0.426	2.6e-13

FB|FBgn0053531 Ddr "Discoidin domain receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 319 (117.4 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 55/85 (64%), Positives = 68/85 (80%)

Query:     2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
             LWEILTFAREQPYE  SD+ V+E+I    R    H +LP P NCP+EI+DLMCECWQ+ +
Sbjct:   976 LWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCECWQRDE 1035

Query:    62 SDRPNFREIHLFLQRKNLGYNPETN 86
             S RP+FREIHL+LQRKNLG+ P+T+
Sbjct:  1036 SSRPSFREIHLYLQRKNLGFKPQTH 1060

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|E2RNZ4 DDR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 214 (80.4 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE  TF +EQPY   SD++V+E+   F R   + I LPQP+ CP  ++ LM  CW++ 
Sbjct:   787 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPVICPDSVYKLMLSCWRRD 846

Query:    61 DSDRPNFREIHLFL 74
                RP+F+EIHL L
Sbjct:   847 TKHRPSFQEIHLLL 860

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

MGI|MGI:1345277 Ddr2 "discoidin domain receptor family, member 2" [Mus musculus (taxid:10090)]

 Score = 211 (79.3 bits), Expect = 5.5e-16, P = 5.5e-16
 Identities = 35/74 (47%), Positives = 47/74 (63%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE  TF +EQPY   SD++V+E+   F R   + I LPQP  CP  ++ LM  CW++ 
Sbjct:   775 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPDSVYKLMLSCWRRE 834

Query:    61 DSDRPNFREIHLFL 74
                RP+F+EIHL L
Sbjct:   835 TKHRPSFQEIHLLL 848

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISO

GO:0005518 "collagen binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0030199 "collagen fibril organization" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=ISO

GO:0031214 "biomineral tissue development" evidence=IMP

GO:0035988 "chondrocyte proliferation" evidence=IMP

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=ISO;IDA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=ISO;IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IMP

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IMP

ZFIN|ZDB-GENE-090316-2 ddr2a "discoidin domain receptor tyrosine kinase 2a" [Danio rerio (taxid:7955)]

 Score = 210 (79.0 bits), Expect = 7.2e-16, P = 7.2e-16
 Identities = 34/71 (47%), Positives = 48/71 (67%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE+LTF +EQPY   SD++V+E+   F R   + I LPQP  CP  ++ LM  CW ++
Sbjct:   790 TLWEMLTFCKEQPYSQLSDEQVIENTGEFFRDQRRQIYLPQPPMCPDPVYKLMLSCWHRN 849

Query:    61 DSDRPNFREIH 71
               +RP+F+EIH
Sbjct:   850 TKERPSFQEIH 860

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|F1S212 DDR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 9.3e-16, P = 9.3e-16
 Identities = 37/82 (45%), Positives = 51/82 (62%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE+ TF +EQPY   SD++V+E+   F R   +   LPQP  CP  ++ LM  CW++ 
Sbjct:   791 TLWEMFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRD 850

Query:    61 DSDRPNFREIHLFLQ---RKNL 79
                RP+F+EIHL L    +KNL
Sbjct:   851 TKHRPSFQEIHLLLLQQGKKNL 872

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|Q16832 DDR2 "Discoidin domain-containing receptor 2" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 34/74 (45%), Positives = 47/74 (63%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE  TF +EQPY   SD++V+E+   F R   +   LPQP  CP  ++ LM  CW++ 
Sbjct:   776 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRD 835

Query:    61 DSDRPNFREIHLFL 74
               +RP+F+EIHL L
Sbjct:   836 TKNRPSFQEIHLLL 849

GO:0007155 "cell adhesion" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=IDA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IDA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=ISS

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0045860 "positive regulation of protein kinase activity" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=IMP

GO:0005518 "collagen binding" evidence=IDA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IDA

GO:0003416 "endochondral bone growth" evidence=ISS

GO:0035988 "chondrocyte proliferation" evidence=ISS;TAS

GO:0010715 "regulation of extracellular matrix disassembly" evidence=TAS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS;TAS

GO:0048146 "positive regulation of fibroblast proliferation" evidence=ISS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0030199 "collagen fibril organization" evidence=ISS

GO:0031214 "biomineral tissue development" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MIE0 DDR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 205 (77.2 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 34/74 (45%), Positives = 46/74 (62%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE  TF +EQPY   SD++V+E+   F R   +   LPQP  CP  ++ LM  CW++ 
Sbjct:   776 TLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRD 835

Query:    61 DSDRPNFREIHLFL 74
                RP+F+EIHL L
Sbjct:   836 TKHRPSFQEIHLLL 849

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

ZFIN|ZDB-GENE-060503-361 ddr2b "discoidin domain receptor tyrosine kinase 2b" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 33/78 (42%), Positives = 50/78 (64%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWEILT  +EQPY  F+D++V+E+   F R   K + L +P  CP+ ++ LM  CW+++
Sbjct:   767 TLWEILTLCKEQPYAQFTDEQVIENTGEFFRDQNKQVYLLRPACCPESLYSLMLNCWRRN 826

Query:    61 DSDRPNFREIHLFLQRKN 78
               +RP F EIH  L  ++
Sbjct:   827 AKERPTFLEIHSTLTEQH 844

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|F1NG66 DDR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 197 (74.4 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWE  T  REQPY   SD++V+E+   F R   +   LP+P  CP  ++ LM  CW++ 
Sbjct:   782 TLWETFTLCREQPYSQLSDEQVIENTGEFFRDQGRQTYLPKPALCPDSVYKLMLSCWRRD 841

Query:    61 DSDRPNFREIHLFLQ 75
               DRP+F+++H  LQ
Sbjct:   842 TKDRPSFQDLHRQLQ 856

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

ZFIN|ZDB-GENE-041210-162 ddr2l "discoidin domain receptor family, member 2, like" [Danio rerio (taxid:7955)]

 Score = 186 (70.5 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query:     1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             TLWEI T  +EQPY   SD++V+E+   F R+  + I L  P  CP  +F LM  CW + 
Sbjct:   781 TLWEIFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIFLSAPPLCPSSLFKLMMRCWSRD 840

Query:    61 DSDRPNFREIHLFLQ 75
              +DRP+F ++H  L+
Sbjct:   841 ITDRPSFNKLHQALR 855

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	86
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-37
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-24
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-22
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-21
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-21
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-20
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-20
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	4e-19
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-15
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-14
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-14
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-14
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-14
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-14
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-14
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-14
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-13
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-13
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-13
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-13
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	4e-12
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-12
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-12
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-11
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	5e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	8e-11
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	8e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	9e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-10
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-10
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-10
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-10
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-09
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-09
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-09
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-09
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	7e-09
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	8e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-09
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-08
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-08
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	4e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	9e-08
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-07
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	6e-07
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	8e-07
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	9e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-06
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-06
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-06
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	7e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	7e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	9e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	3e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-04
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	9e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.002
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.002
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	0.004

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  125 bits (317), Expect = 3e-37
 Identities = 47/76 (61%), Positives = 59/76 (77%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILT  REQPYE  +DQ+V+E+  HF R   + I LP+P NCPK+I++LM ECW++ 
Sbjct: 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRD 280

Query: 61  DSDRPNFREIHLFLQR 76
           + DRP FREIHLFLQR
Sbjct: 281 EEDRPTFREIHLFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 92.7 bits (230), Expect = 2e-24
 Identities = 33/75 (44%), Positives = 49/75 (65%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEILT  +EQPY   SD++V+E+   F R   + + LP+P  CP  ++ LM  CW+++
Sbjct: 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRN 280

Query: 61  DSDRPNFREIHLFLQ 75
             +RP+F+EIH  L 
Sbjct: 281 AKERPSFQEIHATLL 295

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 86.1 bits (214), Expect = 3e-22
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T     PY   S++ V+E++    R       LP+P  CP E+++LM  CWQ  
Sbjct: 196 LLWEIFTLG-ATPYPGLSNEEVLEYLRKGYR-------LPKPEYCPDELYELMLSCWQLD 247

Query: 61  DSDRPNFREIHLFLQ 75
             DRP F E+   L+
Sbjct: 248 PEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 82.6 bits (205), Expect = 5e-21
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 8/74 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T   EQPY   S++ V+E++ +  R       LPQP NCP E++DLM +CW + 
Sbjct: 192 LLWEIFTLG-EQPYPGMSNEEVLEYLKNGYR-------LPQPPNCPPELYDLMLQCWAED 243

Query: 61  DSDRPNFREIHLFL 74
             DRP F E+   L
Sbjct: 244 PEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 82.6 bits (205), Expect = 6e-21
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T   EQPY   S++ V+E +    R       LP+P NCP E+++LM +CW   
Sbjct: 193 LLWEIFTLG-EQPYPGMSNEEVLELLEDGYR-------LPRPENCPDELYELMLQCWAYD 244

Query: 61  DSDRPNFREIHLFL 74
             DRP F E+   L
Sbjct: 245 PEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 81.8 bits (203), Expect = 1e-20
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T   E+PY   S+  V+E++    R       LP+P NCP E++ LM +CW + 
Sbjct: 193 LLWEIFTLG-EEPYPGMSNAEVLEYLKKGYR-------LPKPPNCPPELYKLMLQCWAED 244

Query: 61  DSDRPNFREIHLFL 74
             DRP F E+   L
Sbjct: 245 PEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 82.3 bits (203), Expect = 1e-20
 Identities = 33/74 (44%), Positives = 44/74 (59%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T  +EQPY   SD++V+E+   F R+  + I L Q   CP  +F LM  CW + 
Sbjct: 220 TLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRD 279

Query: 61  DSDRPNFREIHLFL 74
             DRP F +IH FL
Sbjct: 280 IKDRPTFNKIHHFL 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 78.4 bits (193), Expect = 4e-19
 Identities = 30/74 (40%), Positives = 49/74 (66%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEIL   +EQPY + +D++V+E+   F R   + + L +P  CP+ +++LM +CW + 
Sbjct: 229 TLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRD 288

Query: 61  DSDRPNFREIHLFL 74
             +RP+F +IH FL
Sbjct: 289 CRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 68.1 bits (167), Expect = 2e-15
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 198 MWEVMSYG-ERPYWDMSNQDVIKAVEDGYR-------LPPPMDCPSALYQLMLDCWQKDR 249

Query: 62  SDRPNFREIHLFLQR 76
           ++RP F +I   L +
Sbjct: 250 NERPTFSQIVSTLDK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 66.3 bits (162), Expect = 1e-14
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T+ + QP+   S++ V+E I+       +  +L +P  CP E++D+M  CW++ 
Sbjct: 213 VLWEIFTYGK-QPWYGLSNEEVIECIT-------QGRLLQRPRTCPSEVYDIMLGCWKRD 264

Query: 61  DSDRPNFREIHLFLQ 75
              R N ++IH  LQ
Sbjct: 265 PQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 65.8 bits (161), Expect = 1e-14
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE+ T A EQPY+  S++ V++ +         H  L  P NCP ++ +LM  CWQ +
Sbjct: 210 VLWEMATLA-EQPYQGLSNEEVLKFVI-----DGGH--LDLPENCPDKLLELMRMCWQYN 261

Query: 61  DSDRPNFREIHLFLQR 76
              RP F EI   L+ 
Sbjct: 262 PKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 65.7 bits (160), Expect = 1e-14
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S Q V++ +    R       LP P NCP  +  LM +CWQK  
Sbjct: 198 MWEVMSYG-ERPYWDMSGQDVIKAVEDGFR-------LPAPRNCPNLLHQLMLDCWQKER 249

Query: 62  SDRPNFREIHLFLQR 76
            +RP F +IH  L +
Sbjct: 250 GERPRFSQIHSILSK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 64.8 bits (158), Expect = 3e-14
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 8/70 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI ++   QPY  FS+Q V+E I           +LP P +CP  ++ LM ECW +  
Sbjct: 216 LWEIFSYGL-QPYYGFSNQEVIEMIR-------SRQLLPCPEDCPARVYALMIECWNEIP 267

Query: 62  SDRPNFREIH 71
           + RP F++IH
Sbjct: 268 ARRPRFKDIH 277

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 63.9 bits (156), Expect = 5e-14
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE  ++   +PY +     V+  +    R       LP+P  CP+EI+ +M  CW+  
Sbjct: 187 TLWEAFSYG-AKPYGEMKGAEVIAMLESGER-------LPRPEECPQEIYSIMLSCWKYR 238

Query: 61  DSDRPNFREIHLFLQR 76
             DRP F E+    +R
Sbjct: 239 PEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 64.1 bits (156), Expect = 6e-14
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI ++   QPY   + + V+ ++   +       +L  P NCP E+++LM  CW K  
Sbjct: 222 LWEIFSYGM-QPYYGMAHEEVIYYVRDGN-------VLSCPDNCPLELYNLMRLCWSKLP 273

Query: 62  SDRPNFREIHLFLQR 76
           SDRP+F  I+  LQR
Sbjct: 274 SDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 63.8 bits (155), Expect = 7e-14
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY + S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 199 MWEVMSYG-ERPYWEMSNQDVIKAIEEGYR-------LPAPMDCPAALHQLMLDCWQKDR 250

Query: 62  SDRPNFREIHLFLQR 76
           ++RP F +I   L +
Sbjct: 251 NERPKFEQIVSILDK 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 62.6 bits (152), Expect = 2e-13
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEILT   +QPY   ++Q V++H++   R       L +P NCP +I+ LM  CW +  
Sbjct: 203 MWEILTLG-QQPYPALNNQEVLQHVTAGGR-------LQKPENCPDKIYQLMTNCWAQDP 254

Query: 62  SDRPNFREIHLFLQ 75
           S+RP F  I   LQ
Sbjct: 255 SERPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 62.7 bits (152), Expect = 2e-13
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F   QPY  FS+Q V+E +        K  +LP   +CP  ++ LM ECWQ+  
Sbjct: 216 LWEIFSFGL-QPYYGFSNQEVIEMVR-------KRQLLPCSEDCPPRMYSLMTECWQEGP 267

Query: 62  SDRPNFREIHLFLQ 75
           S RP F++IH  L+
Sbjct: 268 SRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 62.1 bits (151), Expect = 3e-13
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE FS+  VVE +S           L +P   P E++ +M  CW +  
Sbjct: 191 MWEVFSEGK-MPYERFSNSEVVESVS-------AGYRLYRPKLAPTEVYTIMYSCWHEKP 242

Query: 62  SDRPNFREI 70
            DRP F+++
Sbjct: 243 EDRPAFKKL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 61.5 bits (149), Expect = 5e-13
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+++F  E+PY D S+  V++ I+   R       LP P++CP  ++ LM +CWQ+  
Sbjct: 200 MWEVMSFG-ERPYWDMSNHEVMKAINDGFR-------LPAPMDCPSAVYQLMLQCWQQDR 251

Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 252 ARRPRFVDI 260

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 59.1 bits (143), Expect = 4e-12
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V+  I    R       LP P++CP  +  LM +CWQK  
Sbjct: 201 MWEVMSYG-ERPYWDMSNQDVINAIEQDYR-------LPPPMDCPTALHQLMLDCWQKDR 252

Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 253 NARPKFGQI 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 4e-12
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F R  PY     + VV H+    R  A       P  CP E++ +M +CW+   
Sbjct: 189 LWEIYSFGR-VPYPRIPLKDVVPHVEKGYRMEA-------PEGCPPEVYKVMKDCWELDP 240

Query: 62  SDRPNFREIHLFLQR 76
           + RP F+++   L  
Sbjct: 241 AKRPTFKQLREQLAL 255

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 58.5 bits (142), Expect = 7e-12
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   +++ V+E +    R       +P+P NCP+E++DLM +CW K  
Sbjct: 194 LTEIVTYGR-VPYPGMTNREVLEQVERGYR-------MPRPPNCPEELYDLMLQCWDKDP 245

Query: 62  SDRPNFREIHLFLQ 75
            +RP F  +  FL+
Sbjct: 246 EERPTFEYLQSFLE 259

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 57.1 bits (138), Expect = 2e-11
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   ++  V++ +    R       +P P  CPKE++D+M +CW++  
Sbjct: 194 LTEIVTYGR-MPYPGMTNAEVLQQVDQGYR-------MPCPPGCPKELYDIMLDCWKEDP 245

Query: 62  SDRPNF 67
            DRP F
Sbjct: 246 DDRPTF 251

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 56.2 bits (135), Expect = 5e-11
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 8/70 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+ ++   QPY  +S+Q V+E I   +R      +LP P +CP  ++ LM ECW +  
Sbjct: 216 LWEVFSYGL-QPYCGYSNQDVIEMIR--NRQ-----VLPCPDDCPAWVYTLMLECWNEFP 267

Query: 62  SDRPNFREIH 71
           S RP F++IH
Sbjct: 268 SRRPRFKDIH 277

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 55.8 bits (134), Expect = 8e-11
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 211 LWEIATLA-EQPYQGMSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 262

Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 263 KMRPSFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 55.5 bits (134), Expect = 8e-11
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE+ T   E P+   SD+ V+       R  A  + LP P  CP  ++ LM  CW  +
Sbjct: 207 LMWEVFTQG-ELPFYGLSDEEVLN------RLQAGKLELPVPEGCPSRLYKLMTRCWAVN 259

Query: 61  DSDRPNFREI 70
             DRP+F E+
Sbjct: 260 PKDRPSFSEL 269

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 55.5 bits (134), Expect = 9e-11
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+  E+P+   S  ++++ I        +   L +P  CP++I+++M +CW  +
Sbjct: 189 TLWEMFTYG-EEPWAGLSGSQILKKID------KEGERLERPEACPQDIYNVMLQCWAHN 241

Query: 61  DSDRPNFREIHLFL 74
            +DRP F  +  FL
Sbjct: 242 PADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE++T   + PY +     +  ++    R       L QPINCP E+F +M  CW   
Sbjct: 208 LLWELMTLG-QTPYVEIDPFEMAAYLKDGYR-------LAQPINCPDELFAVMACCWALD 259

Query: 61  DSDRPNFREIHLFLQ 75
             +RP+F ++   L 
Sbjct: 260 PEERPSFSQLVQCLT 274

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+  V+E I+          +L +P  CPKE++DLM  CWQ+  
Sbjct: 212 LWEIFTYGK-QPWYQLSNNEVIECITQGR-------VLQRPRTCPKEVYDLMLGCWQREP 263

Query: 62  SDRPNFREIHLFLQ 75
             R N +EIH  LQ
Sbjct: 264 HMRLNIKEIHSLLQ 277

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 16/73 (21%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM----LPQPINCPKEIFDLMCECW 57
           LWEI + A EQPY+  S+++V+           K +M    L QP NCP+ + DLM  CW
Sbjct: 211 LWEITSLA-EQPYQGLSNEQVL-----------KFVMDGGYLDQPDNCPERVTDLMRMCW 258

Query: 58  QKHDSDRPNFREI 70
           Q +   RP F EI
Sbjct: 259 QFNPKMRPTFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 1   TLWEILTFARE------QPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMC 54
           TL+E+ T+         +        +    ++       +   LP+P +CP E++DLM 
Sbjct: 201 TLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMK 260

Query: 55  ECWQKHDSDRPNFREIHLFLQR 76
            CW+    DRP+F ++ L + R
Sbjct: 261 LCWEAEPQDRPSFADLILIVDR 282

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 53.9 bits (129), Expect = 3e-10
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+    + + + +    R       LPQP  C  +++ +M +CW   
Sbjct: 200 TVWELMTFG-AKPYDGIPAREIPDLLEKGER-------LPQPPICTIDVYMIMVKCWMID 251

Query: 61  DSDRPNFREI 70
              RP FRE+
Sbjct: 252 SECRPRFREL 261

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 53.7 bits (129), Expect = 4e-10
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +    R       + +P  CP ++++LM  CWQ + 
Sbjct: 195 LWEIATYGM-SPYPGIDLSQVYELLEKGYR-------MERPEGCPPKVYELMRACWQWNP 246

Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 247 SDRPSFAEIH 256

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 53.5 bits (128), Expect = 5e-10
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 8/73 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+  V+E I+          +L +P  CPKE++D+M  CWQ+  
Sbjct: 215 LWEIFTYGK-QPWFQLSNTEVIECITQGR-------VLERPRVCPKEVYDIMLGCWQREP 266

Query: 62  SDRPNFREIHLFL 74
             R N +EI+  L
Sbjct: 267 QQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 198 MWEILMLGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 249

Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 250 SKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 52.1 bits (125), Expect = 1e-09
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI T   + PY    +  + +++ H +R       L QP +C  E++DLM  CW+  
Sbjct: 204 TMWEIATRG-QTPYPGVENHEIYDYLRHGNR-------LKQPEDCLDELYDLMYSCWRAD 255

Query: 61  DSDRPNFREIHLFLQR 76
             DRP F ++   L+ 
Sbjct: 256 PKDRPTFTKLREVLEN 271

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 51.6 bits (124), Expect = 2e-09
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T     PY     + + + +    R       + +P NC +E++ LM +CW +  
Sbjct: 224 LWEIFTLG-GSPYPGIPVEELFKLLKEGYR-------MEKPQNCTQELYHLMRDCWHEVP 275

Query: 62  SDRPNFREIHLFLQRK 77
           S RP F+++   L R 
Sbjct: 276 SQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 51.1 bits (122), Expect = 3e-09
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+   +E I+           L +P  CP E++ +M  CWQ+  
Sbjct: 214 LWEIFTYGK-QPWYQLSNTEAIECITQGRE-------LERPRTCPPEVYAIMQGCWQREP 265

Query: 62  SDRPNFREIHLFLQR 76
             R   ++IH  LQ 
Sbjct: 266 QQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 3e-09
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE  +   + PY   S+Q+  E I    R       +P P  CP+EI+ LM +CW    
Sbjct: 185 LWETFSLG-DTPYPGMSNQQTRERIESGYR-------MPAPQLCPEEIYRLMLQCWAYDP 236

Query: 62  SDRPNFREIHLFLQ 75
            +RP+F EI+  LQ
Sbjct: 237 ENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE  +     PY + S+Q+  E I    R       LP P  CP  ++ LM  CW+   
Sbjct: 186 LWEAFSLG-AVPYANLSNQQTREAIEQGVR-------LPCPELCPDAVYRLMERCWEYDP 237

Query: 62  SDRPNFREIHLFLQ 75
             RP+F  +H  LQ
Sbjct: 238 GQRPSFSTVHQELQ 251

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+E+ T+  + PY   ++  V + I+   R       +P P  CP+EI+ +M ECW    
Sbjct: 194 LYEMFTYG-QVPYPGMNNHEVYDQITAGYR-------MPCPAKCPQEIYKIMLECWAAEP 245

Query: 62  SDRPNFREIH 71
            DRP+F+ + 
Sbjct: 246 EDRPSFKALR 255

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 50.3 bits (120), Expect = 6e-09
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 10/79 (12%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI+T   + PY    +  +  ++   +R       L QP +C +++++LMC+CW   
Sbjct: 204 TMWEIMTRG-QTPYAGVENSEIYNYLIKGNR-------LKQPPDCLEDVYELMCQCWSPE 255

Query: 61  DSDRPNFREIHLFLQRKNL 79
              RP+F   HL  Q + +
Sbjct: 256 PKCRPSF--QHLRDQLELI 272

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 50.2 bits (120), Expect = 7e-09
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   ++  V++++    R       +P+P NCP+E+++LM  CW++  
Sbjct: 193 LTEIVTYGR-IPYPGMTNPEVIQNLERGYR-------MPRPDNCPEELYELMRLCWKEKP 244

Query: 62  SDRPNF 67
            +RP F
Sbjct: 245 EERPTF 250

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 50.1 bits (120), Expect = 8e-09
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 10/71 (14%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF  + PYE      + + +    R       LPQP  C  +++ ++ +CW   
Sbjct: 200 TVWELMTFGAK-PYEGIPAVEIPDLLEKGER-------LPQPPICTIDVYMVLVKCWM-I 250

Query: 61  DSD-RPNFREI 70
           D++ RP F+E+
Sbjct: 251 DAESRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 50.0 bits (119), Expect = 8e-09
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+ ++ R  PY   S + V E +    R      M P P  CP +++ LM  CW+   
Sbjct: 187 LWEVFSYGR-APYPKMSLKEVKECVEKGYR------MEP-PEGCPADVYVLMTSCWETEP 238

Query: 62  SDRPNFREIHLFLQRK 77
             RP+F ++   L+++
Sbjct: 239 KKRPSFHKLREKLEKE 254

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 49.6 bits (118), Expect = 1e-08
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+EI+T+ +  PY   S+  V+  +    R       +P+  NCP E++D+M  CW++  
Sbjct: 194 LYEIVTYGK-IPYPGMSNSDVMSALQRGYR-------MPRMENCPDELYDIMKTCWKEKA 245

Query: 62  SDRPNF 67
            +RP F
Sbjct: 246 EERPTF 251

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   S+  V+  +    R       +P+P NCP+E++++M  CW+   
Sbjct: 193 LMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKNRP 244

Query: 62  SDRPNFREIHLFLQ 75
            +RP F  I   L 
Sbjct: 245 EERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   ++Q V+E ++   R       L  P  CP  ++ +M +CWQ   
Sbjct: 211 LWEIFSLGY-MPYPGRTNQEVMEFVTGGGR-------LDPPKGCPGPVYRIMTDCWQHTP 262

Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 263 EDRPNFATI 271

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 48.0 bits (114), Expect = 4e-08
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE  ++  ++PY+      V+  I    R       L  P  CP E++ LM +CW   
Sbjct: 187 TMWEAFSYG-QKPYKKMKGPEVMSFIEQGKR-------LDCPAECPPEMYALMKDCWIYK 238

Query: 61  DSDRPNFREI 70
             DRPNF ++
Sbjct: 239 WEDRPNFAKV 248

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 47.0 bits (111), Expect = 9e-08
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L E+ T  R  PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K  
Sbjct: 193 LTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEP 244

Query: 62  SDRPNFREIHLFLQ 75
            +RP F  +  FL+
Sbjct: 245 EERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++  
Sbjct: 213 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKP 264

Query: 62  SDRPNFREIHLFLQR 76
            +RP+F +I + L R
Sbjct: 265 YERPSFAQILVSLNR 279

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 45.3 bits (107), Expect = 3e-07
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE+ S+  VVE I+   R       L +P    + +++LM  CW++  
Sbjct: 191 MWEVFSEGK-TPYENRSNSEVVETINAGFR-------LYKPRLASQSVYELMQHCWKERP 242

Query: 62  SDRPNF 67
            DRP+F
Sbjct: 243 EDRPSF 248

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 39  LPQPINCPKEIFDLMCECWQKHDSDRPNFREI 70
           LP P  CP EI+ +M ECW    S RP+F E+
Sbjct: 245 LPAPPGCPAEIYAIMKECWNNDPSQRPSFSEL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 44.9 bits (106), Expect = 5e-07
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE F++   VE +S   R       L +P    ++++ +M  CW +  
Sbjct: 191 MWEVYSLGK-MPYERFNNSETVEKVSQGLR-------LYRPHLASEKVYAIMYSCWHEKA 242

Query: 62  SDRPNFREI 70
            +RP F+++
Sbjct: 243 EERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.0 bits (106), Expect = 5e-07
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE  +     PY   ++Q+  E +    R +        P  CP +++ +M  CW    
Sbjct: 184 LWETFSLGV-CPYPGMTNQQAREQVEKGYRMSC-------PQKCPDDVYKVMQRCWDYKP 235

Query: 62  SDRPNFREIH 71
            +RP F E+ 
Sbjct: 236 ENRPKFSELQ 245

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 45.0 bits (106), Expect = 6e-07
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L E++T  R  PY   +++ V+E +    R       +P P +CP  + +LM +CW+K  
Sbjct: 193 LTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMLQCWKKDP 244

Query: 62  SDRPNFREIHLFLQ 75
            +RP F  +  FL+
Sbjct: 245 EERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 44.6 bits (105), Expect = 6e-07
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI T   + PY    +  + +++   +R       L QP +C   ++ LM  CW  +
Sbjct: 203 TMWEIATRG-QTPYPGVENSEIYDYLRQGNR-------LKQPPDCLDGLYSLMSSCWLLN 254

Query: 61  DSDRPNFREIHLFLQR 76
             DRP+F  +   L++
Sbjct: 255 PKDRPSFETLRCELEK 270

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 44.6 bits (105), Expect = 8e-07
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+      +   +    R       LPQP  C  +++ +M +CW   
Sbjct: 200 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMID 251

Query: 61  DSDRPNFREI 70
              RP FRE+
Sbjct: 252 ADSRPKFREL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 44.2 bits (104), Expect = 9e-07
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F R  PY     + VV  +        K   +  P  CP  ++D+M +CW    
Sbjct: 189 LWEIYSFGR-VPYPRIPLKDVVPRVE-------KGYKMDAPDGCPPVVYDVMKQCWHLDA 240

Query: 62  SDRPNFREIHLFLQ 75
           + RP+F ++   L+
Sbjct: 241 ATRPSFLQLREQLE 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 4   EILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSD 63
           E++T  R  PY    ++ V+E +    R       +P P  CP+ + +LM  CW+K   +
Sbjct: 195 ELVTKGR-VPYPGMVNREVLEQVERGYR-------MPCPQGCPESLHELMKLCWKKDPDE 246

Query: 64  RPNFREIHLFLQ 75
           RP F  I  FL+
Sbjct: 247 RPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++  
Sbjct: 201 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKP 252

Query: 62  SDRPNFREIHLFLQR 76
            +RP+F +I + L R
Sbjct: 253 YERPSFAQILVSLNR 267

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI+T     PY   + +R+      F+     + M  +P NC +E+++LM  CW++  
Sbjct: 219 LWEIVTLG-GNPYPGIAPERL------FNLLKTGYRM-ERPENCSEEMYNLMLTCWKQEP 270

Query: 62  SDRPNFREI 70
             RP F +I
Sbjct: 271 DKRPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       + +P NC  E+++LM +CW+   
Sbjct: 208 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------MEKPRNCDDEVYELMRQCWRDRP 259

Query: 62  SDRPNFREIHLFLQR 76
            +RP F +I + L R
Sbjct: 260 YERPPFAQISVQLSR 274

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.1 bits (99), Expect = 4e-06
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ T  +  P+E  S+  VVE IS   R       L +P      ++++M  CW +  
Sbjct: 191 MWEVFTEGK-MPFEKKSNYEVVEMISRGFR-------LYRPKLASMTVYEVMYSCWHEKP 242

Query: 62  SDRPNFREI 70
             RP F E+
Sbjct: 243 EGRPTFAEL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 42.1 bits (99), Expect = 5e-06
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++T     PY D     +  ++    R       L QP  CP  ++++M  CW    
Sbjct: 192 LWELMTRG-APPYPDVDSFDITVYLLQGRR-------LLQPEYCPDPLYEVMLSCWHPKP 243

Query: 62  SDRPNFREI 70
             RP F E+
Sbjct: 244 EMRPTFSEL 252

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 42.4 bits (99), Expect = 5e-06
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+    + + + +    R       LPQP  C  +++ +M +CW   
Sbjct: 200 TIWELMTFG-GKPYDGIPTREIPDLLEKGER-------LPQPPICTIDVYMVMVKCWMID 251

Query: 61  DSDRPNFREI 70
              RP F+E+
Sbjct: 252 ADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 41.9 bits (98), Expect = 7e-06
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++++  E PY       V + +    R       L QP  C  +++ +M +CW   
Sbjct: 200 TVWEMMSYGAE-PYAGMRPHEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMID 251

Query: 61  DSDRPNFREI 70
           ++ RP F+E+
Sbjct: 252 ENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 41.8 bits (98), Expect = 7e-06
 Identities = 14/32 (43%), Positives = 22/32 (68%)

Query: 39  LPQPINCPKEIFDLMCECWQKHDSDRPNFREI 70
           LP+P NCP+E++ LM +CW+   S R  F+ +
Sbjct: 245 LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY+      V + I    R       +  P  CP E++DLM  CW    
Sbjct: 188 MWEAFSYG-QKPYKGMKGNEVTQMIESGER-------MECPQRCPPEMYDLMKLCWTYGV 239

Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 240 DERPGFAVVELRLR 253

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 39  LPQPINCPKEIFDLMCECWQKHDSDRPNFREI 70
           LP P NCP+E++ LM  CW+     RP FR +
Sbjct: 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSL 274

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 39.2 bits (91), Expect = 6e-05
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI T     PY        VE +  F      H M  +P NC  E++ LM ECW    
Sbjct: 226 MWEIFTLG-GSPYPGIP----VEEL--FKLLREGHRM-DKPSNCTHELYMLMRECWHAVP 277

Query: 62  SDRPNFREI 70
           + RP F+++
Sbjct: 278 TQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.0 bits (91), Expect = 7e-05
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY        V+  S F +   +   + QP + P EI+D+M  CW    
Sbjct: 233 LWEIFSLG-SNPYPGM----PVD--SKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADP 285

Query: 62  SDRPNFREIHLFLQ 75
             RP F++I   + 
Sbjct: 286 LKRPTFKQIVQLIG 299

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T     PY     + + + +    R       + +P NC  E++ +M ECW    
Sbjct: 226 LWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTHELYMIMRECWHAVP 277

Query: 62  SDRPNFREI 70
           S RP F+++
Sbjct: 278 SQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +  +  PY       +V   S F +   +   + +P   P EI+ +M  CW    
Sbjct: 304 LWEIFSLGK-SPYPGI----LVN--SKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEP 356

Query: 62  SDRPNFREIHLFLQR 76
           ++RP F +I   +QR
Sbjct: 357 TERPTFSQISQLIQR 371

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECW 57
           T+WE+ T A +QPY D SD++V++ +        + I LP+P   +      +++M  CW
Sbjct: 198 TMWELFTAA-DQPYPDLSDEQVLKQVVR-----EQDIKLPKPQLDLKYSDRWYEVMQFCW 251

Query: 58  QKHDSDRPNFREIHLFL 74
              ++ RP   E+H  L
Sbjct: 252 LDPET-RPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECW 57
           T+WE+      QPY   SD++V+ +         + + LP+P   +      +++M  CW
Sbjct: 198 TIWELFELG-SQPYRHLSDEQVLTYTVR-----EQQLKLPKPRLKLPLSDRWYEVMQFCW 251

Query: 58  QKHDSDRPNFREIHLFL 74
            + +  RP+  E+HL L
Sbjct: 252 LQPEQ-RPSAEEVHLLL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI T     PY     + + + +    R       + +P NC  E++ +M +CW    
Sbjct: 229 MWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAIP 280

Query: 62  SDRPNFREI 70
           S RP F+++
Sbjct: 281 SHRPTFKQL 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 36.5 bits (84), Expect = 5e-04
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T     PY     + + + +    R       + +P NC  E++ +M +CW    
Sbjct: 232 LWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVP 283

Query: 62  SDRPNFREI 70
           S RP F+++
Sbjct: 284 SQRPTFKQL 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 35.9 bits (83), Expect = 7e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T   + P+E+ + + + + I        K+  L  P++CP EI  ++  C     
Sbjct: 212 LWEIFT--GKIPFENLTTKEIYDLI------INKNNSLKLPLDCPLEIKCIVEACTSHDS 263

Query: 62  SDRPNFREIHLFL 74
             RPN +EI   L
Sbjct: 264 IKRPNIKEILYNL 276

Length = 283

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 35.8 bits (82), Expect = 9e-04
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T     PY +            F  +  +   + +P +   EI+++M +CW++  
Sbjct: 331 LWEIFTLG-GTPYPELPMNE------QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKF 383

Query: 62  SDRPNFREIHLFLQR 76
             RP+F ++   +  
Sbjct: 384 EIRPDFSQLVHLVGD 398

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY       +V+  S F         + +P +  +E++D+M +CW    
Sbjct: 329 LWEIFSLG-GTPYPGM----IVD--STFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEP 381

Query: 62  SDRPNFREI 70
             RP+F  +
Sbjct: 382 EKRPSFLHL 390

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 2   LWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           LWEI +     PY     D+     +   +R  A       P     EI+ +M +CW  +
Sbjct: 265 LWEIFSLG-ASPYPGVQIDEEFCRRLKEGTRMRA-------PEYATPEIYSIMLDCWHNN 316

Query: 61  DSDRPNFREI 70
             DRP F E+
Sbjct: 317 PEDRPTFSEL 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 34.2 bits (79), Expect = 0.004
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSR--STAKHIMLPQPINCPKEIFDLMCECWQ 58
            L+E+LT   + P   FS + +++ +    R          P+  +  +E  DL+ +C  
Sbjct: 188 ILYELLT--GKPP---FSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLN 242

Query: 59  KHDSDRPNFREI--HLFL 74
           K  S RP   EI  H + 
Sbjct: 243 KDPSKRPTAEEILQHPWF 260

Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
KOG1026|consensus	774		99.8
KOG0197|consensus	468		99.8
KOG0196|consensus	996		99.73
KOG1095|consensus	1025		99.69
KOG0199|consensus	1039		99.67
KOG4278|consensus	1157		99.66
KOG1024|consensus	563		99.64
KOG4257|consensus	974		99.64
KOG0200|consensus	609		99.6
KOG0192|consensus	362		99.55
KOG1094|consensus	807		99.45
KOG0194|consensus	474		99.44
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.43
PHA02988	283	hypothetical protein; Provisional	99.41
KOG1025|consensus	1177		99.35
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.32
KOG4721|consensus	904		99.31
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.3
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.3
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.24
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.24
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.23
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.22
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.22
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.22
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.21
KOG0193|consensus	678		99.2
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.2
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.2
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.2
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.2
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.19
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.17
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.17
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.16
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.15
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.15
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.15
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.14
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.14
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.14
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.14
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.13
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.13
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.12
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.12
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.12
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.11
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.11
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.11
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.11
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.11
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.11
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.1
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.1
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.1
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.1
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.1
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.09
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.08
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.08
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.08
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.08
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.07
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.07
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.07
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.06
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.06
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.06
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.06
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.05
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.05
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.05
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.05
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.04
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.04
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.03
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.03
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.03
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.02
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.02
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.01
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.99
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.99
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.98
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.98
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.98
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.91
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.89
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.88
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.87
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.86
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.86
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.84
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.84
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.83
KOG0198|consensus	313		98.83
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.82
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.82
KOG0195|consensus	448		98.82
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.81
PTZ00283	496	serine/threonine protein kinase; Provisional	98.81
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.81
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.8
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.8
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.79
KOG0578|consensus	550		98.78
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.78
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.77
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.77
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.77
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.76
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.76
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.75
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.75
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.73
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.73
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.73
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.72
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.72
PTZ00267	478	NIMA-related protein kinase; Provisional	98.72
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.72
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.71
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.71
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.69
KOG0581|consensus	364		98.68
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.67
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.67
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.66
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.66
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.66
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.66
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.66
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.66
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.65
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.65
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.65
PHA02882	294	putative serine/threonine kinase; Provisional	98.64
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.64
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.64
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.62
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.62
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.62
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.62
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.62
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.6
KOG0201|consensus	467		98.59
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.59
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.58
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.58
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.58
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.58
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.57
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.57
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.57
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.56
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.55
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.55
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.55
KOG4645|consensus	1509		98.54
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.53
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.52
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.51
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.5
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.5
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.5
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.5
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.49
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.49
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.49
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.48
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.47
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.47
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.46
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.46
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.46
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.45
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.45
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.44
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.44
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.44
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.43
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.43
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.43
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.43
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.42
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.42
KOG4279|consensus	1226		98.42
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.41
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.41
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.4
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.4
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.4
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.39
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.39
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.38
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.37
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.37
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.37
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.37
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.37
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.36
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.36
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.36
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.35
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.34
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.32
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.32
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.31
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.31
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.31
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.29
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.28
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.28
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.27
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.27
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.27
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.27
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.26
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.26
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.25
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.25
KOG1023|consensus	484		98.25
PTZ00036	440	glycogen synthase kinase; Provisional	98.25
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.25
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.25
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.24
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.24
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.24
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.24
KOG0579|consensus	1187		98.23
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.22
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.22
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.21
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.2
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.2
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.2
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.2
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.2
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.19
KOG0588|consensus	786		98.18
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.18
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.18
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.18
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.18
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.17
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.16
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.16
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.15
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.15
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.15
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.15
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.13
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.13
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.13
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.13
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.12
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.12
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.12
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.12
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.11
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.11
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.11
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.1
KOG0575|consensus	592		98.09
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.09
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.09
KOG0591|consensus	375		98.08
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.07
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.07
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.07
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.06
KOG0589|consensus	426		98.06
KOG1006|consensus	361		98.06
KOG0584|consensus	632		98.04
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.04
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.04
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.03
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.02
KOG0983|consensus	391		98.01
KOG0592|consensus	604		97.98
PLN00009	294	cyclin-dependent kinase A; Provisional	97.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	97.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	97.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.93
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	97.92
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.91
KOG0615|consensus	475		97.91
KOG0033|consensus	355		97.9
PTZ00284	467	protein kinase; Provisional	97.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.9
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.89
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	97.89
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.86
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	97.86
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	97.85
KOG0580|consensus	281		97.83
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	97.82
KOG0583|consensus	370		97.82
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	97.81
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	97.8
KOG0582|consensus	516		97.78
KOG0574|consensus	502		97.78
KOG2345|consensus	302		97.77
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	97.73
KOG0603|consensus	612		97.68
KOG0596|consensus	677		97.67
KOG0598|consensus	357		97.65
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.64
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	97.63
PHA03207	392	serine/threonine kinase US3; Provisional	97.57
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.56
PHA03212	391	serine/threonine kinase US3; Provisional	97.56
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.54
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	97.53
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	97.52
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	97.51
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	97.5
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	97.5
KOG0577|consensus	948		97.44
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	97.41
KOG4717|consensus	864		97.34
KOG0599|consensus	411		97.34
KOG0616|consensus	355		97.32
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	97.31
PHA03211	461	serine/threonine kinase US3; Provisional	97.29
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	97.28
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	97.26
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	97.24
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	97.24
PLN00181	793	protein SPA1-RELATED; Provisional	97.2
KOG1989|consensus	738		97.19
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.14
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	97.13
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.12
KOG0694|consensus	694		97.11
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.08
KOG0610|consensus	459		96.96
KOG3653|consensus	534		96.93
KOG0605|consensus	550		96.88
PHA03209	357	serine/threonine kinase US3; Provisional	96.86
KOG0661|consensus	538		96.83
KOG0690|consensus	516		96.74
KOG2052|consensus	513		96.66
KOG0597|consensus	808		96.51
KOG0593|consensus	396		96.49
KOG0587|consensus	953		96.45
KOG0696|consensus	683		96.3
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	96.29
KOG0585|consensus	576		96.27
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	96.25
KOG0032|consensus	382		96.16
KOG0614|consensus	732		96.01
KOG0604|consensus	400		95.9
KOG4158|consensus	598		95.74
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	95.54
KOG0595|consensus	429		95.47
KOG0611|consensus	668		95.24
KOG0586|consensus	596		94.89
KOG1035|consensus	1351		94.53
PHA03210	501	serine/threonine kinase US3; Provisional	94.39
KOG1027|consensus	903		94.3
KOG0576|consensus	829		94.07
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	93.51
KOG0660|consensus	359		93.39
KOG1187|consensus	361		92.59
KOG1151|consensus	775		90.71
KOG0659|consensus	318		89.17
KOG1167|consensus	418		87.5
KOG0671|consensus	415		87.48
KOG0986|consensus	591		86.16
PLN03224	507	probable serine/threonine protein kinase; Provisio	84.98
KOG0600|consensus	560		82.0
KOG0667|consensus	586		81.42

>KOG1026|consensus

Probab=99.80  E-value=1.7e-19  Score=123.07  Aligned_cols=72  Identities=43%  Similarity=0.827  Sum_probs=67.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +|||||++| +.||.++++++|++.|++|..       ++.|..||.++|+||..||..+|.+||+|++|...|++....
T Consensus       694 vLWEIFsyG-~QPy~glSn~EVIe~i~~g~l-------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  694 VLWEIFSYG-KQPYYGLSNQEVIECIRAGQL-------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             hhhhhhccc-cCcccccchHHHHHHHHcCCc-------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            589999999 899999999999999998776       888999999999999999999999999999999999986544

>KOG0197|consensus

Probab=99.80  E-value=1.8e-19  Score=117.97  Aligned_cols=72  Identities=35%  Similarity=0.802  Sum_probs=67.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +||||||+| +.||.+++..+++..|.+|+|       ++.|..||++++++|..||..+|++||||..+...++++...
T Consensus       393 lL~E~fT~G-~~py~~msn~ev~~~le~GyR-------lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  393 LLWELFTYG-RVPYPGMSNEEVLELLERGYR-------LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             hHHHHhccC-CCCCCCCCHHHHHHHHhccCc-------CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            589999999 799999999999999999988       999999999999999999999999999999999999987543

>KOG0196|consensus

Probab=99.73  E-value=1.1e-17  Score=114.53  Aligned_cols=70  Identities=39%  Similarity=0.892  Sum_probs=66.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      +|||++++| +-||.+|++++|+..|.+|+|       ++.|-+||..+++||..||+++-..||.|.+|+..|+++-
T Consensus       823 VmWEVmSyG-ERPYWdmSNQdVIkaIe~gyR-------LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI  892 (996)
T KOG0196|consen  823 VMWEVMSYG-ERPYWDMSNQDVIKAIEQGYR-------LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI  892 (996)
T ss_pred             EEEEecccC-CCcccccchHHHHHHHHhccC-------CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence            599999999 999999999999999999998       8889999999999999999999999999999999999863

>KOG1095|consensus

Probab=99.69  E-value=2.7e-17  Score=115.31  Aligned_cols=76  Identities=30%  Similarity=0.587  Sum_probs=67.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +||||||+| ..||++.++.+++..+..|.|       ++.|..||..++++|..||..+|++||+|..|++.+.++.+.
T Consensus       893 llWEifslG-~~PY~~~~n~~v~~~~~~ggR-------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  893 LLWEIFSLG-ATPYPSRSNFEVLLDVLEGGR-------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             HHHHHHhCC-CCCCCCcchHHHHHHHHhCCc-------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            489999999 799999999999887877555       888999999999999999999999999999999999887666


Q ss_pred             CCCC
Q psy10555         81 YNPE   84 (86)
Q Consensus        81 ~~~~   84 (86)
                      ..+.
T Consensus       965 ~~~~  968 (1025)
T KOG1095|consen  965 ALGT  968 (1025)
T ss_pred             hccC
Confidence            5544

>KOG0199|consensus

Probab=99.67  E-value=8.7e-17  Score=109.54  Aligned_cols=65  Identities=32%  Similarity=0.809  Sum_probs=59.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||||||++| +.||.+....+|+..|-.+.|       ++.|+.|+.++|++|.+||.++|.+||+|..|...
T Consensus       304 TiWEMFtyG-EePW~G~~g~qIL~~iD~~er-------LpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  304 TIWEMFTYG-EEPWVGCRGIQILKNIDAGER-------LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             hHHhhhccC-CCCCCCCCHHHHHHhcccccc-------CCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            699999999 999999999999988876555       99999999999999999999999999999999743

>KOG4278|consensus

Probab=99.66  E-value=1.3e-16  Score=108.13  Aligned_cols=71  Identities=34%  Similarity=0.671  Sum_probs=66.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +||||.||| .-||++++..+|+..+.+|+|       ...|..||..+|+||.+||..+|.+||+|.++..-|+.+..
T Consensus       455 LLWEIATYG-MsPYPGidlSqVY~LLEkgyR-------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  455 LLWEIATYG-MSPYPGIDLSQVYGLLEKGYR-------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHHHHHhcC-CCCCCCccHHHHHHHHhcccc-------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            489999999 799999999999999999988       88899999999999999999999999999999999998754

>KOG1024|consensus

Probab=99.64  E-value=1.9e-16  Score=102.40  Aligned_cols=72  Identities=31%  Similarity=0.697  Sum_probs=66.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +|||++|.| +.||.++++-++...+..|+|       +..|-.||++++.+|.-||...|++||+|+++...|.++...
T Consensus       487 llWELmtlg-~~PyaeIDPfEm~~ylkdGyR-------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  487 LLWELMTLG-KLPYAEIDPFEMEHYLKDGYR-------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             HHHHHHhcC-CCCccccCHHHHHHHHhccce-------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence            489999999 799999999999999999888       888999999999999999999999999999999999886544

>KOG4257|consensus

Probab=99.64  E-value=5.3e-17  Score=109.62  Aligned_cols=70  Identities=37%  Similarity=0.814  Sum_probs=64.6

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ||||++.| ..||.+..+.+|+..+.+|.|       ++.|+.||+.+|.+|.+||+.+|.+||.|.+|...|+.+..
T Consensus       582 mWEIl~lG-vkPfqgvkNsDVI~~iEnGeR-------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  582 MWEILSLG-VKPFQGVKNSDVIGHIENGER-------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHHhc-CCccccccccceEEEecCCCC-------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            79999999 899999999999988888776       89999999999999999999999999999999999887644

>KOG0200|consensus

Probab=99.60  E-value=2e-15  Score=102.64  Aligned_cols=69  Identities=36%  Similarity=0.814  Sum_probs=62.8

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      +||||||+| ..||+++. ..+++..+..|+|       +..|..|+.+++.+|..||..+|++||+|.++...|+..
T Consensus       510 ~L~EifsLG-~~PYp~~~~~~~l~~~l~~G~r-------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  510 LLWEIFTLG-GTPYPGIPPTEELLEFLKEGNR-------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             HHHHHhhCC-CCCCCCCCcHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            489999999 69999977 6777888888877       888999999999999999999999999999999999884

>KOG0192|consensus

Probab=99.55  E-value=1.4e-14  Score=93.48  Aligned_cols=74  Identities=34%  Similarity=0.584  Sum_probs=62.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +|||++|  ++.||.+++..++...+..+.      .++..|..|+..+..+|.+||..+|..||+|.+++..|+.+...
T Consensus       235 vlWEl~t--~~~Pf~~~~~~~~~~~v~~~~------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~  306 (362)
T KOG0192|consen  235 VLWELLT--GEIPFEDLAPVQVASAVVVGG------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH  306 (362)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhcC------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence            4899999  889999999887777776422      23777888999999999999999999999999999999987654


Q ss_pred             CC
Q psy10555         81 YN   82 (86)
Q Consensus        81 ~~   82 (86)
                      +.
T Consensus       307 ~~  308 (362)
T KOG0192|consen  307 IS  308 (362)
T ss_pred             hc
Confidence            43

>KOG1094|consensus

Probab=99.45  E-value=4.8e-14  Score=94.83  Aligned_cols=77  Identities=40%  Similarity=0.995  Sum_probs=65.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ||||+|+..++.||.+++..++++......+.......+..|..||..++++|.+||..+..+||+|+++...|++.
T Consensus       728 TlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  728 TLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            68999999999999999999998877665543333344677899999999999999999999999999999999874

>KOG0194|consensus

Probab=99.44  E-value=7.2e-13  Score=87.80  Aligned_cols=75  Identities=31%  Similarity=0.585  Sum_probs=66.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHH-HhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHI-SHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v-~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||||+.| ..||++++..++...| ..+++       .+.|...|.++..++.+||..+|++||+|.++.+.++.+..
T Consensus       351 ~~~Eif~~g-~~Py~g~~~~~v~~kI~~~~~r-------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  351 LLWEIFENG-AEPYPGMKNYEVKAKIVKNGYR-------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK  422 (474)
T ss_pred             eEEeeeccC-CCCCCCCCHHHHHHHHHhcCcc-------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence            589999999 6799999999999998 55665       78888999999999999999999999999999999999876


Q ss_pred             CCCC
Q psy10555         80 GYNP   83 (86)
Q Consensus        80 ~~~~   83 (86)
                      ...+
T Consensus       423 ~~~~  426 (474)
T KOG0194|consen  423 KKEA  426 (474)
T ss_pred             cccc
Confidence            6543

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.43  E-value=1.1e-13  Score=85.03  Aligned_cols=66  Identities=39%  Similarity=0.879  Sum_probs=55.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++|||+++| +.||.+.+..++...+.++.+       +..+..++..+++++.+||..+|.+||+|.+++..|
T Consensus       194 ~l~ei~~~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  194 LLYEILTLG-KFPFSDYDNEEIIEKLKQGQR-------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHTTS-SGTTTTSCHHHHHHHHHTTEE-------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccccc-ccccccccccccccccccccc-------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            479999977 799999998888888877665       666778999999999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PHA02988 hypothetical protein; Provisional

Probab=99.41  E-value=7.1e-13  Score=82.58  Aligned_cols=71  Identities=30%  Similarity=0.562  Sum_probs=58.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++  |+.||.+.+..++...+..+.      .++..|..++..+.+++.+||..+|++||++.+++..|+.+..
T Consensus       211 il~el~~--g~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        211 VLWEIFT--GKIPFENLTTKEIYDLIINKN------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhcC------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            4799999  689999988777776665422      1255566789999999999999999999999999999998754

>KOG1025|consensus

Probab=99.35  E-value=1.9e-12  Score=89.95  Aligned_cols=72  Identities=28%  Similarity=0.691  Sum_probs=65.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      |+||++|+| ..||.++...+|-..+..|.|       +..|+-|+.++|.+|.+||..|+..||.|+++...+.++.+.
T Consensus       889 tiWElmTFG-a~Py~gi~~~eI~dlle~geR-------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  889 TIWELMTFG-AKPYDGIPAEEIPDLLEKGER-------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             hHHHHHhcC-CCccCCCCHHHhhHHHhcccc-------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            589999999 799999999998888887766       888999999999999999999999999999999999887554

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.32  E-value=3e-12  Score=79.08  Aligned_cols=68  Identities=43%  Similarity=0.905  Sum_probs=57.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||.+.+..++...+..+..       ...|..++.++.+++.+||..+|.+||++.+|+..|++
T Consensus       215 il~el~~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         215 VLWEIFSYG-LQPYYGFSNQEVIEMIRSRQL-------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            478999877 699998888888777766443       45577899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG4721|consensus

Probab=99.31  E-value=5.8e-13  Score=89.83  Aligned_cols=68  Identities=37%  Similarity=0.740  Sum_probs=60.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      +||||+|  ++.||.+.+...|++-|.....      .++.|+.||..+.-|++.||...|..||+|.+|+.+|+-
T Consensus       300 VLWEmLT--~EiPYkdVdssAIIwGVGsNsL------~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  300 VLWEMLT--GEIPYKDVDSSAIIWGVGSNSL------HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HHHHHHh--cCCCccccchheeEEeccCCcc------cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            5899999  8999999999988888865443      378899999999999999999999999999999999874

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.30  E-value=4.6e-12  Score=77.50  Aligned_cols=69  Identities=30%  Similarity=0.718  Sum_probs=57.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||++++| ..||...+..++...+..+.+       ++.|..++.++.+++.+||..+|.+||++.+|...|+..
T Consensus       187 ~l~el~t~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         187 LMWEAFSYG-QKPYKGMKGNEVTQMIESGER-------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            368998766 799998887777777765433       556778999999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.30  E-value=6.7e-12  Score=77.24  Aligned_cols=69  Identities=41%  Similarity=0.912  Sum_probs=57.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| +.||.+.+..++...+.++.+       .+.|..++..+.+++.+||..+|.+||++.+|.+.|+++
T Consensus       197 ~l~ell~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         197 VMWEVMSYG-ERPYWDMSGQDVIKAVEDGFR-------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHhcCC-CCCcCcCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            368877666 799999887777777765543       556778999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.24  E-value=1.5e-11  Score=75.38  Aligned_cols=69  Identities=32%  Similarity=0.750  Sum_probs=58.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||.+.....+...+..+.+       ...|..++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus       187 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         187 TMWEAFSYG-QKPYKKMKGPEVMSFIEQGKR-------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHhcCC-CCCcCcCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            368888666 799999888777777766544       566778899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.24  E-value=2.1e-11  Score=75.32  Aligned_cols=72  Identities=32%  Similarity=0.705  Sum_probs=58.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| +.||...+..++...+..+.+       +..+..++.++.+++.+||..+|++||++.+++..|+.+...
T Consensus       208 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         208 LLWELMTLG-QTPYVEIDPFEMAAYLKDGYR-------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HHHHHhcCC-CCCcCcCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            368899877 799988877776665555433       445567899999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.23  E-value=2.1e-11  Score=75.43  Aligned_cols=68  Identities=41%  Similarity=0.877  Sum_probs=56.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||.+....++...+..+..       .+.+..++.++.+++..||..+|.+||++.+|+..|+.
T Consensus       215 ~l~el~~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         215 VLWEVFSYG-LQPYCGYSNQDVIEMIRNRQV-------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            478999877 789988888777777766443       45567899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.22  E-value=2.8e-11  Score=75.61  Aligned_cols=75  Identities=29%  Similarity=0.657  Sum_probs=60.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||...+..++...+..+..       ...|..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       207 il~el~t~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         207 LLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            368888766 699998887777666655433       445667899999999999999999999999999999987766


Q ss_pred             CCC
Q psy10555         81 YNP   83 (86)
Q Consensus        81 ~~~   83 (86)
                      +.+
T Consensus       279 ~~~  281 (297)
T cd05089         279 RKA  281 (297)
T ss_pred             hcc
Confidence            544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.22  E-value=3.2e-11  Score=74.00  Aligned_cols=69  Identities=38%  Similarity=0.766  Sum_probs=56.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||++++| ..||.+.+..+....+..+.+       ...|..++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus       194 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         194 LLWEIATYG-MSPYPGIDLSQVYELLEKGYR-------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            468888866 799988877776666655433       455678899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.22  E-value=4e-11  Score=74.32  Aligned_cols=72  Identities=26%  Similarity=0.658  Sum_probs=58.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||++++| ..||.+.....+...+..+.+       ...+..++.++..++.+||..+|.+||++.++...|..+...
T Consensus       200 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         200 TVWEMMSYG-AEPYAGMRPHEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHCCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            478999877 799988877666555554433       455667889999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.21  E-value=3.5e-11  Score=73.89  Aligned_cols=69  Identities=30%  Similarity=0.702  Sum_probs=56.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| +.||.+....++...+..+.+       ...+..++..+.+++.+||..+|++||++.+++..|+.+
T Consensus       203 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         203 TMWEIATRG-QTPYPGVENSEIYDYLRQGNR-------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            368888766 799988887777776665433       444667889999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0193|consensus

Probab=99.20  E-value=5.5e-12  Score=85.00  Aligned_cols=75  Identities=23%  Similarity=0.391  Sum_probs=61.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++  |+.||...+.++|+++|..|+..   +.....-..|+.+|..|+..||..++++||.|.+|+..|+.+...
T Consensus       582 V~YELlt--g~lPysi~~~dqIifmVGrG~l~---pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  582 VWYELLT--GELPYSIQNRDQIIFMVGRGYLM---PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHHHh--CcCCcCCCChhheEEEecccccC---ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            4789999  89999977788999999988652   112233367999999999999999999999999999988886553

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.20  E-value=3.5e-11  Score=73.51  Aligned_cols=68  Identities=34%  Similarity=0.810  Sum_probs=56.2

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      +||+++.| +.||...+..++...+..+.+       .+.+..++..+.+++.+||..+|.+||++.++...|+.+
T Consensus       194 l~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         194 LYEMFTYG-QVPYPGMNNHEVYDQITAGYR-------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHcCC-CCCCCcCCHHHHHHHHHhCCc-------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            67888766 799988887777766665443       555678999999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.20  E-value=3.7e-11  Score=73.49  Aligned_cols=69  Identities=32%  Similarity=0.736  Sum_probs=56.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||++++| ..||.+.....+...+..+.+       .+.+..++.++.+++.+||..+|++||++.++...|+++
T Consensus       193 ~l~~l~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         193 LLYEIVTYG-KIPYPGMSNSDVMSALQRGYR-------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HHHHHHccC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            468888877 799998877777766665433       444567889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.20  E-value=4.6e-11  Score=74.27  Aligned_cols=71  Identities=31%  Similarity=0.735  Sum_probs=58.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||++++| ..||.+....++...+..+.+       .+.|..++.++.+++..||..+|.+||++.+++..|+++..
T Consensus       218 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         218 LLWEIVTLG-GNPYPGIAPERLFNLLKTGYR-------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHhCCCC-------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            368888877 799998887777766655433       55567889999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.20  E-value=3.9e-11  Score=73.28  Aligned_cols=70  Identities=34%  Similarity=0.854  Sum_probs=57.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||...+..++...+.++..       .+.|..++..+.+++.+||..+|.+||++.++...|+++.
T Consensus       187 ~l~~~~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         187 TLWEAFSYG-AKPYGEMKGAEVIAMLESGER-------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHcCC-CCCcccCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            468888766 799988887777776665433       5567788999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.19  E-value=4.8e-11  Score=75.14  Aligned_cols=72  Identities=29%  Similarity=0.730  Sum_probs=58.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||++++| ..||.+....++...+..+.+       .+.+..++.++..++.+||..+|++||++.+++..+..+...
T Consensus       200 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         200 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHhCCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            478988877 799988877766555544433       555678899999999999999999999999999999887544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.17  E-value=5.8e-11  Score=72.52  Aligned_cols=66  Identities=32%  Similarity=0.628  Sum_probs=54.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++.| +.||...+..++...+.++.+       ...|...+..+.+++.+||..+|++||++.+++..|
T Consensus       190 ~l~el~~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         190 LMWEVFTEG-KMPFEKKSNYEVVEMISRGFR-------LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            368888866 799998887777777766543       445667788999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.17  E-value=8.4e-11  Score=71.86  Aligned_cols=71  Identities=28%  Similarity=0.596  Sum_probs=55.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||...+..++...+..+..       +..+..++..+.+++.+||..+|++||++.+++..|+++..
T Consensus       191 ~l~el~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         191 LLWELMTRG-APPYPDVDSFDITVYLLQGRR-------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            368888855 678888777666655554332       44566788999999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.16  E-value=7.6e-11  Score=72.34  Aligned_cols=68  Identities=38%  Similarity=0.944  Sum_probs=56.4

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      +||+++.| ..||......++...+..+.+       .+.+..++..+.+++.+||..+|++||++.+++..|+++
T Consensus       198 l~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         198 MWEVMSYG-ERPYWDMSNQDVIKAVEDGYR-------LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHccC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            57877767 799988887777776665443       455677899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.15  E-value=8e-11  Score=72.18  Aligned_cols=69  Identities=35%  Similarity=0.781  Sum_probs=56.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||.+.+..++...+..+..       ...|..++..+.+++.+||..+|.+||++.++...|+.+
T Consensus       204 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         204 TMWEIATRG-QTPYPGVENHEIYDYLRHGNR-------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            368888766 799988887777766655432       455678899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.15  E-value=7.1e-11  Score=72.13  Aligned_cols=69  Identities=29%  Similarity=0.679  Sum_probs=55.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| +.||...+..++...+..+..       ...+..++..+.+++.+||..+|++||++.++...|+.+
T Consensus       188 i~~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         188 LLWEIYSFG-RVPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            367888766 799988877777666655433       445667899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.15  E-value=1.1e-10  Score=71.61  Aligned_cols=69  Identities=38%  Similarity=0.915  Sum_probs=56.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||...+..++...+..+.+       .+.+..++.++.+++.+||..+|.+||++.+++..|+++
T Consensus       199 il~ell~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         199 VMWEVMSFG-ERPYWDMSNHEVMKAINDGFR-------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHhCC-CCCCCcCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            368888767 799988777777766665433       445567899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.14  E-value=1e-10  Score=72.82  Aligned_cols=72  Identities=38%  Similarity=0.749  Sum_probs=58.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||++++| ..||...+..+++..+..+..       ...+..++..+.+++.+||..+|.+||++.+++..|+++...
T Consensus       214 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         214 ILWEIFTYG-KQPWFQLSNTEVIECITQGRV-------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHhCCCC-------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            468888877 799988887776666655433       344567889999999999999999999999999999998553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.14  E-value=1.4e-10  Score=72.06  Aligned_cols=70  Identities=31%  Similarity=0.701  Sum_probs=57.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++..+.+++.+||..+|.+||++.+++..|+++.
T Consensus       223 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         223 LLWEIFTLG-GSPYPGIPVEELFKLLKEGYR-------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHhcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            368888777 699998887777666655433       5567788999999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.14  E-value=9.6e-11  Score=72.52  Aligned_cols=68  Identities=44%  Similarity=0.900  Sum_probs=55.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||.+.+...+...+.....       ++.+..++..+.+++.+||..+|.+||++.++.+.|.+
T Consensus       215 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         215 VLWEIFSFG-LQPYYGFSNQEVIEMVRKRQL-------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            368888867 789988877777776665432       55667889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.14  E-value=9.1e-11  Score=72.31  Aligned_cols=67  Identities=39%  Similarity=0.848  Sum_probs=54.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||++++| ..||.+.+...+...+..+..       ...+..++..+.+++.+||..+|++||++.+++..|+
T Consensus       213 il~e~~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         213 VLWEIFTYG-KQPWYGLSNEEVIECITQGRL-------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            368888777 799988887777766665432       3345678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.13  E-value=1.1e-10  Score=71.48  Aligned_cols=68  Identities=32%  Similarity=0.780  Sum_probs=55.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| +.||.+.+..++...+..+.+       .+.+..++.++.+++.+||..+|++||++.++...|+.
T Consensus       192 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         192 LLTEIVTYG-RIPYPGMTNPEVIQNLERGYR-------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHhCC-CCCCCCCChHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            367888756 799998887777666655433       45567788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.13  E-value=1.1e-10  Score=71.44  Aligned_cols=67  Identities=27%  Similarity=0.722  Sum_probs=53.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||...+..++...+.++.+       ...+...+..+.+++.+||..+|.+||++.+++..++
T Consensus       190 ~l~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         190 LMWEVYSLG-KMPYERFNNSETVEKVSQGLR-------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHhcCC-CCCcCcCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            378898877 799988887777666665543       4445667899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.12  E-value=1.6e-10  Score=71.79  Aligned_cols=71  Identities=42%  Similarity=0.822  Sum_probs=58.3

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +||+++.| ..||.......+...+..+..       ...+..++.++.+++.+||..+|.+||++.++...|+.+...
T Consensus       212 l~~l~t~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         212 LWEIFTYG-KQPWYQLSNNEVIECITQGRV-------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHHHHhCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            67888766 799988887777777766543       344567889999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.12  E-value=1.5e-10  Score=71.31  Aligned_cols=67  Identities=40%  Similarity=0.777  Sum_probs=54.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| +.||.+.+..++...+..+..       ...|..++.++.+++.+||..+|.+||++.+++..|+
T Consensus       210 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         210 VLWEMATLA-EQPYQGLSNEEVLKFVIDGGH-------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHhhccC-CCCCccCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            468888877 799988887777666654332       4557778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.12  E-value=1.4e-10  Score=71.01  Aligned_cols=68  Identities=34%  Similarity=0.814  Sum_probs=55.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| +.||.+.+...+...+..+..       .+.+..++..+.+++.+||..+|.+||++.++...|+.
T Consensus       193 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         193 LLTEIVTYG-RMPYPGMTNAEVLQQVDQGYR-------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            367888877 799998887776666654332       44566788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.11  E-value=1.4e-10  Score=71.65  Aligned_cols=67  Identities=37%  Similarity=0.784  Sum_probs=54.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||.+.+...+...+....+       ...|..++..+.+++.+||..+|++||++.+++.+|+
T Consensus       210 il~el~~~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         210 LLWEIFSLG-YMPYPGRTNQEVMEFVTGGGR-------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            368888766 799998887776665554322       4556788999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.11  E-value=1.6e-10  Score=70.98  Aligned_cols=69  Identities=39%  Similarity=0.899  Sum_probs=56.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||...+...+...+....+       .+.+..++..+.+++.+||..+|.+||++.+++..|+++
T Consensus       200 ~l~e~l~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         200 VMWEVMSYG-ERPYWDMSNQDVINAIEQDYR-------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHhcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            367888766 799988877777766654433       455678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.11  E-value=1.3e-10  Score=71.97  Aligned_cols=67  Identities=36%  Similarity=0.786  Sum_probs=54.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||++++| ..||...+..+....+..+..       ...+..++..+.+++.+||..+|.+||++.++...|+
T Consensus       213 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         213 VLWEIFTYG-KQPWYQLSNTEAIECITQGRE-------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHcCC-CCCCccCCHHHHHHHHHcCcc-------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            368888877 799988877766665554432       4456778999999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.11  E-value=1.3e-10  Score=73.75  Aligned_cols=71  Identities=27%  Similarity=0.582  Sum_probs=54.3

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+... ..+...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       265 il~el~~~g-~~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         265 LLWEIFSLG-ASPYPGVQINEEFCQRLKDGTR-------MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHhCC-CCCCCCCCccHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            478998767 799987553 333444443322       44567788999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.11  E-value=2e-10  Score=71.01  Aligned_cols=72  Identities=31%  Similarity=0.706  Sum_probs=57.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||++++| ..||.......+...+..+..       .+.+..++.++.+++.+||..+|++||++.+++..|+.+...
T Consensus       200 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         200 TVWELMTFG-AKPYDGIPAREIPDLLEKGER-------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHCCCc-------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            478988877 799988777666665655433       444667899999999999999999999999999999887544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.11  E-value=1.6e-10  Score=70.74  Aligned_cols=68  Identities=34%  Similarity=0.717  Sum_probs=54.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||.+....+....+..+..       .+.+...+..+.+++.+||..+|.+||++.++.+.|++
T Consensus       192 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         192 LLTELVTKG-RVPYPGMVNREVLEQVERGYR-------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            368888756 799998877766665554322       44456788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=1.7e-10  Score=70.41  Aligned_cols=68  Identities=32%  Similarity=0.751  Sum_probs=55.2

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      +||+++.| ..||...+..++...+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+.+
T Consensus       189 l~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         189 LWEIYSFG-RVPYPRIPLKDVVPHVEKGYR-------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHhcC-CCCCCCCCHHHHHHHHhcCCC-------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            67888766 799988887777666655433       445667899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.10  E-value=1.8e-10  Score=71.49  Aligned_cols=68  Identities=41%  Similarity=0.806  Sum_probs=55.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||++++| ..||.+.+..++...+..+..       ...+..++.++.+++.+||..+|.+||++.+++..|++
T Consensus       221 il~el~~~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         221 VLWEIFSYG-MQPYYGMAHEEVIYYVRDGNV-------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            368888766 689988887777766665433       44466788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.10  E-value=2e-10  Score=71.87  Aligned_cols=75  Identities=40%  Similarity=0.957  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++..+..||.+.+..+++..+....+..........|+.++..+.+++.+||..+|.+||++.+|...|+
T Consensus       229 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         229 TLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            367887643468998887776665554322211111112345678999999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.10  E-value=2.2e-10  Score=71.68  Aligned_cols=72  Identities=28%  Similarity=0.623  Sum_probs=58.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+++...
T Consensus       228 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         228 LMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHHHcCC-CCCcccCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            368888866 689988887777776665433       455678899999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.10  E-value=2e-10  Score=70.63  Aligned_cols=70  Identities=34%  Similarity=0.760  Sum_probs=57.2

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +||+++.| ..||...+..+....+.++.+       ...|..++..+.+++.+||..+|.+||++.+++..|+.+..
T Consensus       198 l~el~~~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         198 MWEILMLG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHcC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            67877666 799988877666666655443       55567889999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.09  E-value=1.9e-10  Score=70.88  Aligned_cols=70  Identities=34%  Similarity=0.763  Sum_probs=56.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+...+...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       200 il~el~~~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         200 LLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHHcCC-CCCccccCHHHHHHHHhCCCC-------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            368888766 699988877766666554433       4456678899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.08  E-value=2.9e-10  Score=71.59  Aligned_cols=71  Identities=28%  Similarity=0.658  Sum_probs=58.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|++||++.+++..|+++..
T Consensus       225 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         225 LMWEIFTLG-GSPYPGIPVEELFKLLREGHR-------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            368888877 689988887777766655433       45567889999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.08  E-value=2.3e-10  Score=70.01  Aligned_cols=68  Identities=32%  Similarity=0.740  Sum_probs=54.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       .+.+...+..+.+++.+||..+|.+||++.++...|+.
T Consensus       192 ~l~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         192 LLTELVTKG-RVPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            367888755 799988887776666654332       45567788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.08  E-value=2.9e-10  Score=71.30  Aligned_cols=71  Identities=30%  Similarity=0.653  Sum_probs=57.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       231 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         231 LLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             HHHHHHcCC-CCCCCcCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            368888766 689988777666666654432       55677889999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.08  E-value=4.4e-10  Score=69.45  Aligned_cols=72  Identities=28%  Similarity=0.684  Sum_probs=58.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+....++...+..+..       .+.|..++.++..++.+||..+|.+||++.++...|.++.+.
T Consensus       200 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         200 TVWELMTFG-AKPYEGIPAVEIPDLLEKGER-------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHHHHhcCC-CCCCCCCCHHHHHHHHhCCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            367888767 799998887777766665433       455667889999999999999999999999999999987554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.07  E-value=2.3e-10  Score=70.15  Aligned_cols=67  Identities=43%  Similarity=0.951  Sum_probs=53.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||...+..+....+..+.+       ...+..++..+.+++.+||..+|.+||++.++...|+
T Consensus       202 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         202 LMWEILTLG-QQPYPALNNQEVLQHVTAGGR-------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHcC-CCCCcccCHHHHHHHHhcCCc-------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            368888767 699988777666655554332       4556778899999999999999999999999999876

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.07  E-value=3e-10  Score=69.43  Aligned_cols=66  Identities=36%  Similarity=0.775  Sum_probs=53.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++.| ..||...+..+....+..+.+       ...|..++.++.+++.+||..+|++||++.+++..|
T Consensus       190 il~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         190 LMWEVFSEG-KMPYERFSNSEVVESVSAGYR-------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHhccC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            368888766 799988777776666655433       455667899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.07  E-value=3.2e-10  Score=69.25  Aligned_cols=68  Identities=38%  Similarity=0.878  Sum_probs=55.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| +.||.+.+.......+..+.+       .+.+..++.++.+++.+||..+|.+||++.++...|+.
T Consensus       193 il~~l~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         193 LLTEIVTYG-RVPYPGMTNREVLEQVERGYR-------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            367888767 799988877766666655433       45566789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.06  E-value=3.5e-10  Score=70.28  Aligned_cols=75  Identities=61%  Similarity=1.231  Sum_probs=54.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.++..||...+..+++..+....+..........+..++.++.+++.+||..+|.+||++.+|+..|+
T Consensus       221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            367888754578998877776666655443322222223345667899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.06  E-value=4.2e-10  Score=70.55  Aligned_cols=72  Identities=29%  Similarity=0.730  Sum_probs=56.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||++++| ..||.+....++...+..+.+       ++.+..++..+..++.+||..+|++||++.+++..|+++...
T Consensus       200 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         200 TIWELMTFG-GKPYDGIPTREIPDLLEKGER-------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            368888777 699988776666555554333       445567889999999999999999999999999999986443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.06  E-value=2.8e-10  Score=69.41  Aligned_cols=68  Identities=29%  Similarity=0.750  Sum_probs=54.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++.| ..||...+..+....+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+.
T Consensus       186 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         186 LLWEVFSYG-RAPYPKMSLKEVKECVEKGYR-------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHhCC-CCCCccCCHHHHHHHHhCCCC-------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            368888766 799988877766666555433       44456788999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.06  E-value=4.6e-10  Score=68.94  Aligned_cols=70  Identities=33%  Similarity=0.748  Sum_probs=55.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+....++...+..+..       .+.+..++..+.+++.+||..+|.+||++.++...|+...
T Consensus       192 ~l~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         192 LLTELTTKG-RVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHHHcCC-CCCCCCCChHHHHHHHhcCCC-------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            368888866 789988877766665544322       3445678899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.05  E-value=3.4e-10  Score=69.87  Aligned_cols=67  Identities=42%  Similarity=0.786  Sum_probs=54.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||.+.+..++...+..+..       ...+..++..+.+++.+||..+|.+||++.+++..|+
T Consensus       210 ~l~el~~~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         210 VLWEIATLA-EQPYQGMSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            368888866 789988887776666655332       3446678899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.05  E-value=4.5e-10  Score=71.28  Aligned_cols=70  Identities=31%  Similarity=0.682  Sum_probs=57.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       225 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         225 LLWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            368888766 689998887777666655433       4556778899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.05  E-value=6.3e-10  Score=67.85  Aligned_cols=64  Identities=20%  Similarity=0.314  Sum_probs=51.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+..+..       .+.|..++..+.+++.+||..+|.+||++.+++..
T Consensus       189 i~~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         189 ILYELCT--LKHPFQANSWKNLILKVCQGSY-------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             hheehhh--ccCCCCCCCHHHHHHHHhcCCC-------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            4789998  6899988777666666665443       34466788999999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.05  E-value=3.7e-10  Score=70.83  Aligned_cols=72  Identities=33%  Similarity=0.725  Sum_probs=56.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||...+..++...+..+.+       ...+..++.++.+++.+||..+|++||++.+++..++.+...
T Consensus       212 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         212 LLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             HHHHHHhcC-CCCcccCChHHHHHHHhcCCc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            468888766 699988777666555544322       444566889999999999999999999999999998886544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.04  E-value=5.6e-10  Score=68.60  Aligned_cols=68  Identities=38%  Similarity=0.928  Sum_probs=55.0

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      +||+++.| ..||.+....+....+.++.+       .+.+..++..+.+++.+||..+|.+||++.+++..|+++
T Consensus       199 l~ell~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         199 MWEVMSYG-ERPYWEMSNQDVIKAIEEGYR-------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHhcCC-CCCcccCCHHHHHHHHhCCCc-------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            67877666 799988777666666665433       455667889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.04  E-value=3.8e-10  Score=68.48  Aligned_cols=67  Identities=42%  Similarity=0.867  Sum_probs=55.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||...+..++...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+
T Consensus       196 il~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         196 LLWEIFTLG-ATPYPGLSNEEVLEYLRKGYR-------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            367888865 799999888877777765443       5567788999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.03  E-value=5.1e-10  Score=67.98  Aligned_cols=67  Identities=28%  Similarity=0.721  Sum_probs=53.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||...........+..+.+       ...+..++..+.+++.+||..+|.+||++.++.+.|.
T Consensus       183 ll~~~~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         183 LLWETFSLG-VCPYPGMTNQQAREQVEKGYR-------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHhcCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            367888767 689998877766666655433       4456678999999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.03  E-value=5.4e-10  Score=68.44  Aligned_cols=67  Identities=34%  Similarity=0.820  Sum_probs=54.4

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      +||+++.| ..||.+.+..++...+..+..       .+.+...+.++.+++.+||..+|++||++.++...|+.
T Consensus       193 l~~l~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         193 LMEIVTYG-RIPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHhcC-CCCCCCCCHHHHHHHHhCCCC-------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            57888766 799998887776666655432       45556788999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.03  E-value=6e-10  Score=68.46  Aligned_cols=69  Identities=30%  Similarity=0.742  Sum_probs=54.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||.+.+..++...+..+..       ...+..++..+.+++.+||..+|++||++.+++..|+.+
T Consensus       204 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         204 TMWEIMTRG-QTPYAGVENSEIYNYLIKGNR-------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHhhCC-CCCCCCCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            368888766 799988877666655554322       344567889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.02  E-value=5e-10  Score=72.42  Aligned_cols=69  Identities=28%  Similarity=0.675  Sum_probs=53.2

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||..... ..+...+..+.+       ...|...+.++.+++.+||..+|++||++.+++..|++.
T Consensus       305 ~l~ellt~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         305 LLWEIFSLG-SSPYPGMPVDSKFYKMIKEGYR-------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHhcC-CCCCCCCCchHHHHHHHHhCcc-------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            468888766 799988654 344444544433       444667789999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.02  E-value=5.6e-10  Score=68.01  Aligned_cols=66  Identities=33%  Similarity=0.671  Sum_probs=52.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++.| ..||.......+...+..+.+       ...|...+..+++++.+||..+|++||++.+++..|
T Consensus       190 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         190 LMWEVFSEG-KTPYENRSNSEVVETINAGFR-------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHcCC-CCCCCcCCHHHHHHHHhCCCC-------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            368888766 789988777777766665433       444566789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.01  E-value=7.9e-10  Score=68.98  Aligned_cols=75  Identities=44%  Similarity=0.991  Sum_probs=52.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++..+..||...+..+++..+....+........+.+..++..+.+++.+||..+|.+||++.++...|+
T Consensus       221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            368888743478998877666554432211111011123445678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.00  E-value=6.6e-10  Score=71.87  Aligned_cols=69  Identities=28%  Similarity=0.640  Sum_probs=52.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHH-HHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRV-VEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i-~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| +.||........ ...+..+..       ...|...+.++.+++.+||..+|.+||++.++++.|+++
T Consensus       303 il~ellt~G-~~Pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         303 LLWEIFSLG-KSPYPGILVNSKFYKMVKRGYQ-------MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHhCC-CCCCccccccHHHHHHHHcccC-------ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            468888766 799987654433 333333222       444566789999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.99  E-value=6.5e-10  Score=67.68  Aligned_cols=67  Identities=37%  Similarity=0.785  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||...+.......+..+.+       ...+..++..+.+++.+||..+|++||++.++...|+
T Consensus       185 il~e~~~~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         185 LLWEAFSLG-AVPYANLSNQQTREAIEQGVR-------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHhCC-CCCccccCHHHHHHHHHcCCC-------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            367888766 789988777666555554322       4556778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.99  E-value=1.1e-09  Score=68.35  Aligned_cols=74  Identities=43%  Similarity=0.919  Sum_probs=52.1

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      +||+++.++..||...+..+++..+.+..+..........++.++..+.+++.+||..+|++||++.+|+..|+
T Consensus       221 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         221 LWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            67887754578998877766665544322211111112335568899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.98  E-value=1.3e-09  Score=66.41  Aligned_cols=68  Identities=34%  Similarity=0.860  Sum_probs=53.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++|||+++| ..||...+..++...+...      +.....+...+..+.+++.+||..+|++||++.+++..|.
T Consensus       189 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         189 TLWEMFTYG-EEPWAGLSGSQILKKIDKE------GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhc------CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            368888877 7999888877766655431      1224456678899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.98  E-value=8.6e-10  Score=67.03  Aligned_cols=66  Identities=41%  Similarity=0.826  Sum_probs=52.4

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      +||+++.| ..||...........+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+
T Consensus       185 ~~~l~t~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         185 LWETFSLG-DTPYPGMSNQQTRERIESGYR-------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHhcc-CCCCccCCHHHHHHHHhcCCC-------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            57888766 789988776665555544322       4456788999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.98  E-value=9.5e-10  Score=71.98  Aligned_cols=70  Identities=26%  Similarity=0.592  Sum_probs=54.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHH-HHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRV-VEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i-~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||......+. ...+..+.+       +..|..++.++.+++.+||..+|.+||++.+|+..|+.+.
T Consensus       330 il~e~l~~g-~~P~~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         330 LLWEIFTLG-GTPYPELPMNEQFYNAIKRGYR-------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHcC-CCCCCCCCchHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            468888866 589987664443 333443333       5556778999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.95  E-value=1e-09  Score=66.73  Aligned_cols=64  Identities=17%  Similarity=0.260  Sum_probs=50.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+.......+..+..       ...+...+.++.+++.+||..+|++||++.+++.+
T Consensus       190 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         190 VLYECCT--GKHPFDANNQGALILKIIRGVF-------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCCC-------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            3789998  6899988776666655554332       44455788999999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.94  E-value=1.2e-09  Score=71.53  Aligned_cols=70  Identities=24%  Similarity=0.591  Sum_probs=54.1

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||...... .+...+..+.+       +..+..++.++.+++.+||..+|++||++.++.+.|+++.
T Consensus       328 il~ellt~g-~~P~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         328 LLWEIFSLG-GTPYPGMIVDSTFYNKIKSGYR-------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHHCC-CCCCcccchhHHHHHHHhcCCC-------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            468888766 6899876543 34444444333       5556788999999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.94  E-value=2.8e-09  Score=66.29  Aligned_cols=69  Identities=42%  Similarity=0.772  Sum_probs=55.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||.+....++...+..+..       ...+..++..+.+++.+||..+|.+||++.+++..|++.
T Consensus       210 ~l~el~~~~-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         210 VLWEITSLA-EQPYQGLSNEQVLKFVMDGGY-------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            367888766 689988887777666654332       444667889999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.94  E-value=1.6e-09  Score=66.33  Aligned_cols=70  Identities=13%  Similarity=0.232  Sum_probs=50.0

Q ss_pred             CEeceeecCCCCCCCCCC--HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFS--DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++  +..||....  ...+...+..+..      +...+...+..+.+++.+||..+|++||++.++++.++.+.
T Consensus       195 ~l~el~~--g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         195 LLYEMAA--LQSPFYGDKMNLFSLCQKIEQCDY------PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHhc--CCCCCccccccHHHHHHHHhcCCC------CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            4789998  678986543  3344444433221      11122457789999999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.94  E-value=1.5e-09  Score=69.26  Aligned_cols=71  Identities=25%  Similarity=0.542  Sum_probs=53.5

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||..... ..+...+..+.+       ...|...+.++.+++.+||..+|.+||++.+++.+|+.+..
T Consensus       270 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         270 LLWEIFSLG-ASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHHHCC-CCCCCCccccHHHHHHHhccCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            367888766 799987653 334444444332       44566678899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.91  E-value=2.3e-09  Score=68.46  Aligned_cols=70  Identities=27%  Similarity=0.612  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+....+ ....+..+.+       ...|..++.++.+++.+||..+|++||++.+++++|+++.
T Consensus       264 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         264 LLWEIFSLG-ASPYPGVQIDEEFCRRLKEGTR-------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHcC-CCCCCCCCccHHHHHHHhccCC-------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            367888766 79998754332 3333333322       4446678899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.89  E-value=4e-09  Score=66.19  Aligned_cols=69  Identities=30%  Similarity=0.699  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++.| ..||....... ....+..+.+       ...+...+.++.+++.+||..+|++||++.+++..|+++
T Consensus       232 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         232 LLWEIFSLG-SNPYPGMPVDSKFYKLIKEGYR-------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHhCC-CCCcCCCCchHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            368888766 68998766443 3333333322       344556789999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.88  E-value=2.7e-09  Score=64.80  Aligned_cols=65  Identities=46%  Similarity=0.958  Sum_probs=52.6

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      +||+++.| ..||...+...+...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|
T Consensus       194 ~~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      194 LWEIFTLG-ESPYPGMSNEEVLEYLKKGYR-------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHhCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            57788766 689988887777777765543       455667899999999999999999999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.87  E-value=2.8e-09  Score=65.32  Aligned_cols=63  Identities=21%  Similarity=0.350  Sum_probs=49.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |+.||.+.+....+..+.....       +..|..++..+.+++.+||..+|.+||++.+++.
T Consensus       201 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         201 LVVEMLT--GKHPFPDCTQLQAIFKIGENAS-------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHhh--CCCCCCCccHHHHHHHHhccCC-------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            3688998  6899988766555544443322       4456678999999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.87  E-value=3.9e-09  Score=64.78  Aligned_cols=67  Identities=12%  Similarity=0.240  Sum_probs=49.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++  ++.||...........+..+..      .+.....++..+.+++.+||..+|++||++.++...+.
T Consensus       202 ll~~l~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         202 ILYQMCT--LQPPFYSTNMLSLATKIVEAVY------EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHh--CCCcccccCHHHHHHHHhhccC------CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            4789998  6899977666555555544322      11112357889999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.86  E-value=3.3e-09  Score=64.64  Aligned_cols=64  Identities=20%  Similarity=0.283  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+...+...+..+..       +..+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       190 i~~~l~~--g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         190 VLYEMCT--LKHAFEAGNMKNLVLKIIRGSY-------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHHc--CCCCccCCCHHHHHHHHhcCCC-------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            3678888  6799987776666655555433       44567789999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.86  E-value=7.1e-09  Score=63.89  Aligned_cols=71  Identities=27%  Similarity=0.543  Sum_probs=49.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.+ ..||...+..+++..+..+...  ...++..+...+..+.+++..|| .+|++||++.++++.|.
T Consensus       197 ~l~el~~~~-~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         197 TLWELFENA-AQPYSHLSDREVLNHVIKDQQV--KLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhhccc--ccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            468888755 7899887776666555432210  11123334457788999999999 67999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.84  E-value=1.5e-08  Score=62.43  Aligned_cols=39  Identities=44%  Similarity=1.047  Sum_probs=35.0

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      .+.+..++.++.+++.+||..+|.+||++.+++..|+.+
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         245 LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            444667889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.84  E-value=6.1e-09  Score=64.47  Aligned_cols=40  Identities=40%  Similarity=0.886  Sum_probs=35.5

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      .+.+..++..+.+++.+||..+|++||++.+++..|+++.
T Consensus       243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            3446678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.83  E-value=6.8e-09  Score=63.44  Aligned_cols=69  Identities=17%  Similarity=0.333  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCC--CHHHHHHHHHhhhhhccccCCCCCCC-CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDF--SDQRVVEHISHFSRSTAKHIMLPQPI-NCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~--~~~~i~~~v~~~~~~~~~~~~~~~p~-~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  +..||...  +..++...+..+..       .+.|. ..+..+.+++.+||..+|.+||++.+|+..|+.+
T Consensus       195 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         195 LLYEMAA--LQSPFYGDKMNLYSLCKKIEKCDY-------PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHH--CCCCcccCCccHHHHHhhhhcCCC-------CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            3688888  67898653  33344444443322       33343 6788999999999999999999999999999876


Q ss_pred             h
Q psy10555         78 N   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       266 ~  266 (267)
T cd08224         266 H  266 (267)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0198|consensus

Probab=98.83  E-value=1.3e-08  Score=65.02  Aligned_cols=68  Identities=21%  Similarity=0.350  Sum_probs=51.8

Q ss_pred             CEeceeecCCCCCCCC-CCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYED-FSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~-~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      |+.||+|  |+.||.+ ....+.+..+...      ...+..|..++.+..+++.+|+..+|++|||+.+++.+...
T Consensus       211 tVvEM~T--g~~PW~~~~~~~~~~~~ig~~------~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  211 TVVEMLT--GKPPWSEFFEEAEALLLIGRE------DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             EEEeccC--CCCcchhhcchHHHHHHHhcc------CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            5789999  8999988 3433333333321      12257788899999999999999999999999999987543

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.82  E-value=4.5e-09  Score=63.91  Aligned_cols=64  Identities=22%  Similarity=0.327  Sum_probs=48.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+.+..+..+..       .+.++..+.++.+++.+||..+|++||++.+++.+
T Consensus       191 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         191 VLYELCT--LKHPFEGNNLHQLVLKICQGYF-------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHhcccC-------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            3688888  6799987766555544443322       33455678999999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.82  E-value=7.4e-09  Score=63.73  Aligned_cols=67  Identities=34%  Similarity=0.759  Sum_probs=51.9

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      +||+++.| ..||.......+...+..+..      ....+..++..+.+++.+||..+|.+||++.+++..|.
T Consensus       208 l~~l~~~~-~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         208 MWEVFTQG-ELPFYGLSDEEVLNRLQAGKL------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHhCC-CCCccccchHHHHHHHHcCCc------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            67888766 789988777666665554321      13345678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0195|consensus

Probab=98.82  E-value=3.7e-09  Score=66.70  Aligned_cols=68  Identities=28%  Similarity=0.445  Sum_probs=58.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHH-hhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHIS-HFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~-~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+.|  ++.||.+.++.+.--.|. +|.       +...|+..+..+..+|.-|-..||.+||.|..|+-.|+++
T Consensus       378 llwel~t--revpfadlspmecgmkialegl-------rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  378 LLWELNT--REVPFADLSPMECGMKIALEGL-------RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHhhc--cccccccCCchhhhhhhhhccc-------cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            4799999  999999998877654453 444       4888999999999999999999999999999999999876

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.81  E-value=6.4e-09  Score=64.45  Aligned_cols=64  Identities=27%  Similarity=0.297  Sum_probs=45.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||++.. +..||.+....+....+...         ...|...+.++.+++.+||..+|.+||+|.+++..|
T Consensus       210 ~l~el~~~-g~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         210 TLLEICFD-GEVPLKERTPSEKERFYEKK---------HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHHhC-CCCCccccChHHHHHHHHhc---------cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            36787533 47999877655443332221         222344567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.81  E-value=3.2e-09  Score=65.63  Aligned_cols=64  Identities=23%  Similarity=0.253  Sum_probs=49.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+.......+..+..       +..+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       190 il~el~t--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         190 TAIELAK--GEPPNSDMHPMRVLFLIPKNNP-------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHH--CCCCCCCcChHhHhhhhhcCCC-------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            3688998  7899988776665554433221       33445678899999999999999999999999776

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.81  E-value=5.6e-09  Score=69.99  Aligned_cols=64  Identities=17%  Similarity=0.274  Sum_probs=52.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||.+.+..+++..+..+..       .+.|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       234 ilyeLlt--G~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        234 LLYELLT--LKRPFDGENMEEVMHKTLAGRY-------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            4789999  6899998887777766655433       44567889999999999999999999999999864

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.81  E-value=1.1e-08  Score=62.87  Aligned_cols=71  Identities=27%  Similarity=0.554  Sum_probs=46.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||......+.......+...  ....+......+..+.++|..|| .+|++||++.+|...|+
T Consensus       198 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         198 TIWELFELG-SQPYRHLSDEQVLTYTVREQQL--KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHHHhCC-CCCCCCCChHHHHHHHhhcccC--CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            368888666 7899887766544333222110  00111112346788899999999 58999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.80  E-value=7.8e-09  Score=63.13  Aligned_cols=65  Identities=17%  Similarity=0.299  Sum_probs=49.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||...+....+..+...      ......|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       196 il~el~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         196 TVVEMLT--EKPPWAEFEAMAAIFKIATQ------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHHh--CCCCccccchHHHHHHHhcc------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            4789998  78999877655444333321      11244567889999999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.80  E-value=6.4e-09  Score=63.26  Aligned_cols=64  Identities=13%  Similarity=0.225  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+...+...+..+..       ...+...+..+.+++.+||..+|.+||++.+|+++
T Consensus       199 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         199 LIYELCA--LSPPFTARNQLQLASKIKEGKF-------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHH--CCCcccCcCHHHHHHHHhcCCC-------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            3688888  6899988776666665554332       44566788999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.79  E-value=5.8e-09  Score=60.60  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=47.1

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcH--HHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPK--EIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~--~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  ++.||..... ...+..+..+.... .......+...+.  ++.+++.+||..+|.+||++.+++.++..+
T Consensus        93 il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750       93 TLYEALD--YELPYNEERELSAILEILLNGMPAD-DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHh--CCCCccccchhcHHHHHHHHHhccC-CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            4789999  7899976543 23333333222110 0000011122333  689999999999999999999999988765


Q ss_pred             h
Q psy10555         78 N   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       170 ~  170 (176)
T smart00750      170 F  170 (176)
T ss_pred             H
Confidence            3

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0578|consensus

Probab=98.78  E-value=8.6e-09  Score=69.15  Aligned_cols=65  Identities=20%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .|||+.  |++||.+.++.+.++.|.....     ..+..|..++..+.+++.+|+..|+.+|+++.+|+.+
T Consensus       459 aIEMve--GEPPYlnE~PlrAlyLIa~ng~-----P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  459 AIEMVE--GEPPYLNENPLRALYLIATNGT-----PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHhc--CCCCccCCChHHHHHHHhhcCC-----CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            589998  8999999999888888887543     3466678899999999999999999999999999886

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.78  E-value=8.2e-09  Score=63.75  Aligned_cols=64  Identities=23%  Similarity=0.243  Sum_probs=48.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...........+..+..       ...+..++.++.+++.+||..+|++||++.+++.+
T Consensus       190 il~el~t--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         190 TAIELAK--GEPPNSDLHPMRVLFLIPKNSP-------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHh--CCCCCcccchhhHHhhhhcCCC-------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            3688988  6899987665555444433221       33345678899999999999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.77  E-value=1e-08  Score=62.41  Aligned_cols=64  Identities=19%  Similarity=0.263  Sum_probs=49.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||...+...+...+..+..       +..+...+..+.+++.+||..+|.+||++.+++.+
T Consensus       191 il~~l~~--g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         191 CVYEMAT--LKHAFNAKDMNSLVYRIIEGKL-------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHhcCC-------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            3688888  6799987776655555544332       34456788999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.77  E-value=7.5e-09  Score=62.92  Aligned_cols=64  Identities=17%  Similarity=0.211  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||...+.......+..+..       .+.+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       190 ~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         190 VLYELAS--LKRAFEAANLPALVLKIMSGTF-------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHh--CCCCcccCchHHHHHHHHhcCC-------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            3688888  6799987766555444443222       34456688999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.77  E-value=9.8e-09  Score=63.55  Aligned_cols=66  Identities=24%  Similarity=0.313  Sum_probs=49.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+....+..+..     .....|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       197 il~el~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         197 TLIEMAQ--IEPPHHELNPMRVLLKIAKSEP-----PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHcc--CCCCccccCHHHHHHHHhhcCC-----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3789998  6799988776555444433221     1123455688999999999999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.76  E-value=9.5e-09  Score=62.61  Aligned_cols=64  Identities=20%  Similarity=0.262  Sum_probs=50.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+....+..+..       .+.+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       190 i~~~l~~--g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         190 VLYELLT--LKRTFDATNPLNLVVKIVQGNY-------TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHcCCC-------CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            3688888  6799988776666666655433       33346678999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.76  E-value=1.4e-08  Score=62.27  Aligned_cols=69  Identities=14%  Similarity=0.198  Sum_probs=48.8

Q ss_pred             CEeceeecCCCCCCCCCCH--HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSD--QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~--~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  +..||.+...  ......+.....      ....+..++..+.+++.+||..+|.+||++.+|+..+.++
T Consensus       195 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         195 LLYEMAA--LQSPFYGDKMNLYSLCKKIEQCDY------PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHHh--CCCCcccccchHHHHhhhhhcCCC------CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            3688888  6799976442  233333332211      1122345788999999999999999999999999988875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.75  E-value=1.2e-08  Score=62.45  Aligned_cols=65  Identities=28%  Similarity=0.465  Sum_probs=45.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.+ ..||...+..........  +       ...|.....++.+++.+||..+|++||++.+++..|+
T Consensus       194 ~l~~l~~g~-~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         194 TLWEIFSGG-DKPLSALDSQKKLQFYED--R-------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHcCC-CCChhhccHHHHHHHHHc--c-------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            368888833 567766655433222211  1       3445556788999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.75  E-value=1.1e-08  Score=63.00  Aligned_cols=65  Identities=29%  Similarity=0.323  Sum_probs=44.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||++..| ..||......+..... .+.        .......+.++.+++.+||..+|.+||+|.+|+..++
T Consensus       198 ~l~el~~~~-~~p~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         198 TLWEICYNG-EIPLKDKTLAEKERFY-EGQ--------CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHhCC-CCCCCCcchhHHHHHH-hcC--------ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            368886444 7888776544432211 111        1112234578999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.73  E-value=1.3e-08  Score=62.82  Aligned_cols=66  Identities=27%  Similarity=0.362  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+.+..+..+..     .....|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       197 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         197 TLIELAQ--MEPPHHELNPMRVLLKILKSEP-----PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHh--CCCCcccCCHHHHHHHHhcCCC-----CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            3688998  7899988876665555544322     1233456788999999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.73  E-value=1.5e-08  Score=62.64  Aligned_cols=64  Identities=22%  Similarity=0.250  Sum_probs=49.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+..+..       ...+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       190 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         190 TAIELAK--GEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHc--CCCCCCccchHHHHHHHhcCCC-------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            3688998  6899988776655555543322       33455688999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.73  E-value=1.3e-08  Score=62.76  Aligned_cols=64  Identities=25%  Similarity=0.313  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPIN-CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~-~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+.......+..+..       +..+.. ++.++.+++.+||..+|++||++.+++.+
T Consensus       187 il~~l~t--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         187 TAIELAK--GEPPLSDLHPMRVLFLIPKNNP-------PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             HHHHHHh--CCCCcccCchHHHHHHhhhcCC-------CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            4689998  6899987776655555544322       222333 78899999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.72  E-value=1.2e-08  Score=63.04  Aligned_cols=65  Identities=18%  Similarity=0.200  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||........+..+....      ........++.++.+++.+||..+|.+||++.+++.+
T Consensus       215 ~l~el~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         215 TAIEMAE--GAPPLCDMHPMRALFLIPRNP------PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             HHHHHHh--CCCCccccCHHhhhhhHhhCC------CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            3689998  679998766544333332211      1112234678999999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.72  E-value=1.9e-08  Score=61.73  Aligned_cols=65  Identities=18%  Similarity=0.216  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...........+....      .+...+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       205 ~l~el~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         205 TAIEMAE--GAPPLCDMHPMRALFLIPRNP------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             HHHHHHh--CCCCccccCHHHHHHHHhcCC------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            4789998  679997766544333332211      1122234678899999999999999999999998763

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.72  E-value=1.7e-08  Score=67.34  Aligned_cols=63  Identities=19%  Similarity=0.291  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++  +..||.+.+..+++..+..+..       .+.|..++.++.+++.+||..+|++||++.+++.
T Consensus       260 ~l~el~t--g~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        260 ILYELLT--LHRPFKGPSQREIMQQVLYGKY-------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC-------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            4789998  6899998887777777665433       3446678899999999999999999999999865

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.72  E-value=3.3e-08  Score=60.74  Aligned_cols=71  Identities=30%  Similarity=0.588  Sum_probs=49.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++.| ..||......++...+......  ....+..+..++..+..++..|| .+|++||++.+++..|.
T Consensus       198 ~l~el~~~~-~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         198 TMWELFTAA-DQPYPDLSDEQVLKQVVREQDI--KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHHHhCC-CCCCCcCCHHHHHHHHhhccCc--cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            468888866 6899887766555444332210  11112234567888999999999 59999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.71  E-value=1.8e-08  Score=62.38  Aligned_cols=66  Identities=23%  Similarity=0.310  Sum_probs=46.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||...+....+..+..+.     ......|..++.++.+++.+||..+|++||++.+++.+
T Consensus       218 i~~el~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         218 TAIELGD--GDPPLADLHPMRALFKIPRNP-----PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHhc--CCCCCCCCchhHHHhhccccC-----CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            3688888  689998776543332222211     11122345578899999999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.71  E-value=1.8e-08  Score=60.94  Aligned_cols=63  Identities=24%  Similarity=0.318  Sum_probs=49.0

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||+++  +..||...+..++...+.....       .+.|..++.++.+++.+||..+|++||++.+++.+
T Consensus       193 ~~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         193 LYELCT--LKHPFEGENLLELALKILKGQY-------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHc--CCCCCCCCcHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            678887  6799988776666555543222       34466788999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.70  E-value=4.7e-09  Score=64.39  Aligned_cols=69  Identities=16%  Similarity=0.159  Sum_probs=44.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++  +..||...+..+....+.....   .......+...+..+.+++.+||..+|++||++.+++.++
T Consensus       198 il~el~~--g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         198 TAIELAE--LQPPMFDLHPMRALFLMSKSNF---QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHh--CCCCccccchhhhheeeecCCC---CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            3688888  6789876654433222222111   0011111234678999999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.69  E-value=2e-08  Score=60.95  Aligned_cols=64  Identities=22%  Similarity=0.232  Sum_probs=50.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+...+...+..+..       ...+...+.++.+++.+||..+|++||++.+++.+
T Consensus       190 ~~~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         190 LLYEMAT--FAPPFEARSMQDLRYKVQRGKY-------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhcCCC-------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            3688888  6899988877666555554332       34455788999999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0581|consensus

Probab=98.68  E-value=2.9e-08  Score=63.92  Aligned_cols=64  Identities=19%  Similarity=0.221  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCC-----CHHHHHHHHHhhhhhccccCCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDF-----SDQRVVEHISHFSRSTAKHIMLPQPIN-CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~-----~~~~i~~~v~~~~~~~~~~~~~~~p~~-~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +++|++.  |+.||...     +.-+++..|..+       .++..|.. ++.++..++..|+..||.+||+..+++.+
T Consensus       266 sllE~a~--GrfP~~~~~~~~~~~~~Ll~~Iv~~-------ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  266 SLLELAI--GRFPYPPPNPPYLDIFELLCAIVDE-------PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HHHHHhh--CCCCCCCcCCCCCCHHHHHHHHhcC-------CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            3689998  78999874     445566666653       23555665 99999999999999999999999999875

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.67  E-value=2e-08  Score=62.98  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.......+.....      ....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       203 il~el~t--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         203 TCIELAE--RKPPLFNMNAMSALYHIAQNDS------PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHc--CCCCCCCccHHHHHHHHhcCCC------CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            3689999  7899988776655444443211      111134577899999999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.67  E-value=1.6e-08  Score=61.51  Aligned_cols=65  Identities=23%  Similarity=0.347  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  +..||...........+....     ......+...+..+.+++.+||..+|.+||++.+++.
T Consensus       188 il~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         188 TAIEMAE--GKPPYSDIHPMRAIFMIPNKP-----PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHh--CCCCCCCcchhhhhhhhccCC-----CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            3688998  689998766554433332211     1112334457789999999999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.66  E-value=2.7e-08  Score=61.82  Aligned_cols=66  Identities=17%  Similarity=0.211  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+....+..+..+..     .....+...+..+.+++.+||..+|++||++.+++.+
T Consensus       222 i~~el~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         222 TAIELGD--GDPPLFDMHPVKTLFKIPRNPP-----PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHHHhh--CCCCCCCCcHHHHHHHHhcCCC-----CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            3688998  6899988776554444433211     1122345677889999999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.66  E-value=1.8e-08  Score=61.47  Aligned_cols=68  Identities=19%  Similarity=0.204  Sum_probs=46.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||.+.+.......+.....   .......+...+.++.+++.+||..+|.+||++.+++.+
T Consensus       193 ~l~~~~t--g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         193 TAIELAE--LQPPMFDLHPMRALFLISKSNF---PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhccC---CCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            3689998  7899988776554444433211   001111223456789999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.66  E-value=5.1e-08  Score=60.34  Aligned_cols=39  Identities=44%  Similarity=0.970  Sum_probs=35.0

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      .+.+..++.++.+++.+||..+|++||++.+++..|+.+
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         245 LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            444567889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.66  E-value=3.5e-08  Score=61.14  Aligned_cols=67  Identities=15%  Similarity=0.285  Sum_probs=48.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...........+....    .+.....|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       196 il~~l~~--g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         196 SILEMAL--GRYPYPPETYANIFAQLSAIV----DGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHHh--CCCCCCCcchhhHHHHHHHHh----hcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            3688998  789997765444433332211    111234456788999999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.66  E-value=3e-08  Score=60.60  Aligned_cols=64  Identities=22%  Similarity=0.194  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+..+..       +..+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       194 ~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         194 ILYEMCC--LAHAFEGQNFLSVVLRIVEGPT-------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHHcCCC-------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            3678888  6789876665555444443222       34456788999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.66  E-value=3.6e-08  Score=61.34  Aligned_cols=66  Identities=26%  Similarity=0.335  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+.....     .....+..++.++.+++.+||..+|++||++.+++.+
T Consensus       204 il~el~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         204 TLIEMAQ--IEPPHHELNPMRVLLKIAKSEP-----PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHhc--CCCCCccccHHHHHHHHhcCCC-----ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            3689998  6799987765554444433211     1123355678899999999999999999999999774

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.65  E-value=3.9e-08  Score=61.87  Aligned_cols=68  Identities=19%  Similarity=0.182  Sum_probs=49.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++  |..||.+.+.......+..+..      ....+...+..+.+++.+||..+|.+||++.+++.+.-.
T Consensus       203 il~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         203 TCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             HHHHHHc--CCCCCccccHHHHHHHHhhcCC------CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence            3688888  6789988765554444443322      111234678889999999999999999999999886443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.65  E-value=3.7e-08  Score=61.68  Aligned_cols=66  Identities=18%  Similarity=0.222  Sum_probs=48.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+.......+.....     .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       204 il~~llt--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         204 MAIEMVE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcCC-----cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            3688998  6899988766544433433211     1133456788999999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.65  E-value=4.4e-08  Score=60.00  Aligned_cols=65  Identities=17%  Similarity=0.316  Sum_probs=47.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |..||...+.......+....     ...+..+...+.++.+++.+||..+|.+||++.+++.
T Consensus       197 ~~~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         197 TVFEMAT--GKPPLASMDRLAAMFYIGAHR-----GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHh--CCCccccCChHHHHHHhhhcc-----CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            3688898  789998766543333332211     1123456678899999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.64  E-value=3.3e-08  Score=61.86  Aligned_cols=70  Identities=10%  Similarity=0.168  Sum_probs=46.5

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhh-hhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFS-RSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~-~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++  |+.||.+.+ ...++....... .....+  ...++.++..+.+++..||..+|.+||++.+|.+.+
T Consensus       222 ~l~el~~--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        222 CMLKWAG--IKLPWKGFGHNGNLIHAAKCDFIKRLHEG--KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHh--CCCCCCccccchHHHHHhHHHHHHHhhhh--hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            4789998  789998863 333322221111 000000  112346789999999999999999999999998875

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.64  E-value=3.6e-08  Score=60.19  Aligned_cols=63  Identities=19%  Similarity=0.374  Sum_probs=44.9

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |..||.... ...+...+..+..       +..|.  .++..+.+++.+||..+|.+||++.+++.
T Consensus       195 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         195 VVLEMAT--GKRPWSELDNEFQIMFHVGAGHK-------PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHh--CCCCccCCcchHHHHHHHhcCCC-------CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            4688998  689998763 3333333333221       33343  34889999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.64  E-value=2.8e-08  Score=61.57  Aligned_cols=68  Identities=18%  Similarity=0.348  Sum_probs=43.9

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||..... .+.+..+..+..   .......+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       199 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         199 TLYEVAT--GKFPYPKWNSVFDQLTQVVKGDP---PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHh--CCCCchhcchHHHHHhhhcCCCC---CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3689998  6899976542 111222221111   000011123478899999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.62  E-value=4.1e-08  Score=59.99  Aligned_cols=64  Identities=20%  Similarity=0.298  Sum_probs=43.9

Q ss_pred             CEeceeecCCCCCCCCCC-----HHHHHHHHHhhhhhccccCCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-----DQRVVEHISHFSRSTAKHIMLPQPIN-CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-----~~~i~~~v~~~~~~~~~~~~~~~p~~-~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||....     ..+....+....       .+..+.. ++.++.+++.+||..+|++||++.+++.+
T Consensus       188 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         188 SLIELAT--GRFPYPPENDPPDGIFELLQYIVNEP-------PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHHh--CCCCCCccccccccHHHHHHHHhcCC-------CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            4688898  679997652     222222222211       1233333 78899999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.62  E-value=4.3e-08  Score=59.55  Aligned_cols=65  Identities=25%  Similarity=0.355  Sum_probs=47.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...........+...      ......+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       191 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         191 TVLEMAT--GKPPWSQLEGVAAVFKIGRS------KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHHHHh--CCCCcccCcHHHHHHHHHhc------ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            3688998  68999876644433333321      11244566788999999999999999999999998763

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.62  E-value=1.7e-07  Score=58.14  Aligned_cols=39  Identities=36%  Similarity=0.836  Sum_probs=35.1

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      .+.+..++..+.+++.+||..+|.+||++.+++..|+.+
T Consensus       245 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         245 LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            445667899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=3.5e-08  Score=60.37  Aligned_cols=65  Identities=26%  Similarity=0.343  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |..||...+.......+..+..     .....+...+.++.+++.+||..+|.+||++.+++.
T Consensus       207 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         207 TAIELAD--GKPPLCDMHPMRALFKIPRNPP-----PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHh--CCCCccccchHHHHHHhhccCC-----CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            3678888  7899987665444444433211     112223346789999999999999999999999976

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.62  E-value=3.6e-08  Score=60.17  Aligned_cols=66  Identities=23%  Similarity=0.294  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+.......+.....     ......   ..++..+.+++.+||..+|++||++.+++.+
T Consensus       196 i~~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         196 TAIELAT--GAAPYSKYPPMKVLMLTLQNDP-----PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HHHHHHh--CCCCccccChhhhHHHHhcCCC-----CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            3689998  7899988776554444433211     111111   3567899999999999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.60  E-value=8.6e-08  Score=60.52  Aligned_cols=68  Identities=21%  Similarity=0.237  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++  |..||...+.......+..+..      ....+...+..+.+++.+||..+|.+||++.+++.++-.
T Consensus       213 il~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         213 TCIELAE--RKPPLFNMNAMSALYHIAQNES------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHHhccC------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence            3688998  6799988776655555544322      122245678899999999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0201|consensus

Probab=98.59  E-value=9.1e-09  Score=67.57  Aligned_cols=64  Identities=20%  Similarity=0.225  Sum_probs=51.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |.+||.+  |++||..+++..+++.|.+..     ++.+  ...++..+.+++..|+..+|+.||++.+++++
T Consensus       200 TaiEla~--GePP~s~~hPmrvlflIpk~~-----PP~L--~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  200 TAIELAK--GEPPHSKLHPMRVLFLIPKSA-----PPRL--DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             HHHHHhc--CCCCCcccCcceEEEeccCCC-----CCcc--ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            3578888  899999999877776665421     1122  24788999999999999999999999999886

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.59  E-value=1.3e-07  Score=59.72  Aligned_cols=59  Identities=17%  Similarity=0.260  Sum_probs=47.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFRE   69 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~   69 (86)
                      ++||+++  |+.||...+..+.+..+..+.        ...|...+.++.+++.+||..+|.+||++.+
T Consensus       187 il~el~t--g~~p~~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         187 LMFEMLT--GSLPFQGKDRKETMTMILKAK--------LGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             Eeeeecc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            5899999  789999887777666665432        3456778999999999999999999999433

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.58  E-value=5.7e-08  Score=60.90  Aligned_cols=69  Identities=13%  Similarity=0.093  Sum_probs=49.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++  |..||.+.+..++...+..+..     ..+..+..++.++.+++.+||..+|.+||++..+...++.
T Consensus       205 vl~el~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         205 ILYEFLV--GCVPFFGDTPEELFGQVISDDI-----EWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhccc-----CCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            3688888  7899998877777766655432     0122223578999999999999999999997555554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.58  E-value=4.8e-08  Score=60.03  Aligned_cols=64  Identities=19%  Similarity=0.311  Sum_probs=45.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||........+..+...      +..+..|..++..+..++ +||..+|++||++.+++.+
T Consensus       198 i~~el~~--g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         198 TVVEMLT--EKPPWAEYEAMAAIFKIATQ------PTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HHHHHHH--CCCCccccchHHHHHHHhcC------CCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            3689998  68999877654433333221      112444566778888888 7988999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.58  E-value=5.8e-08  Score=58.80  Aligned_cols=63  Identities=27%  Similarity=0.450  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  +..||...+.......+.....       ...+..++..+.+++.+||..+|++||++.+++.
T Consensus       188 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         188 TVIELLT--GNPPYYDLNPMAALFRIVQDDH-------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHhccCC-------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            3688888  6799987765544444433222       4456678899999999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.58  E-value=4.3e-08  Score=60.40  Aligned_cols=64  Identities=19%  Similarity=0.269  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC-CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI-NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~-~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...........+....       .+..+. ..+.++.+++.+||..+|.+||++.+++.+
T Consensus       191 ~l~~ll~--g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         191 TIYEMAT--GNPPYSDVDAFRAMMLIPKSK-------PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             HHHHHHh--CCCCCCCCChhhhhhccccCC-------CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            4789998  689998776554333332211       122222 378899999999999999999999999774

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.57  E-value=6.2e-08  Score=62.06  Aligned_cols=64  Identities=13%  Similarity=0.162  Sum_probs=45.9

Q ss_pred             CEeceeecCCCCCCCCCCHH---HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ---RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~---~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||......   .+...+....       ....+..++.++.+++.+||..+|++||++.+++.+
T Consensus       262 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        262 SILEFYL--GRFPFGVGRQGDWASLMCAICMSQ-------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHh--CCCCCCCCCCccHHHHHHHHhccC-------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4789998  78999743322   2222222221       134456788999999999999999999999999886

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.57  E-value=7.1e-08  Score=60.37  Aligned_cols=66  Identities=18%  Similarity=0.224  Sum_probs=46.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+.......+.....     .....+...+..+.+++.+||..+|.+||++.+++.+
T Consensus       205 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         205 MAIEMIE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHHHh--CCCCCCCCCHHHhHHHHhcCCC-----CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            4688998  7899987665433222222111     1123355678899999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.57  E-value=6.7e-08  Score=59.36  Aligned_cols=65  Identities=15%  Similarity=0.313  Sum_probs=45.4

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...... .....+....      ..+..|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       200 vl~~l~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         200 TIVEMAT--GKPPFIELGEPQAAMFKVGMFK------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             HHHHHHh--CCCCCccccChhhhHhhhhhhc------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            3688888  67999765432 2222221111      1134566788999999999999999999999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.56  E-value=7.9e-08  Score=59.83  Aligned_cols=66  Identities=12%  Similarity=0.127  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+....+..+..+..     .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       204 ~l~ell~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         204 MVIEMVD--GEPPYFNEPPLQAMKRIRDNLP-----PKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             HHHHHHh--CCCCCcCCCHHHHHHHHHhcCC-----CCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            4789998  6899988776655555544321     1122234478899999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.55  E-value=9.4e-08  Score=58.25  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPIN-CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~-~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||....   ..+....+....       ....+.. ++..+.+++.+||..+|++||++.+++.+
T Consensus       189 il~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         189 TLLECAL--GKFPFLPPGQPSFFELMQAICDGP-------PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHh--CCCCCccccccCHHHHHHHHhcCC-------CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            3688998  689998763   344444444321       1333445 78999999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.55  E-value=8.2e-08  Score=58.42  Aligned_cols=64  Identities=31%  Similarity=0.496  Sum_probs=43.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++||+++.| ..||...+............       ..+.+  ....+.+++.+||..+|.+||++.+++..|
T Consensus       195 ~~~~l~~~~-~~p~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         195 TLLEICSNG-EEPLSTLSSSEKERFYQDQH-------RLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHHHhCC-CCCcccCCchhHHHHHhcCC-------CCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            367888755 68887765433322222111       12222  237899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.55  E-value=7.4e-08  Score=58.94  Aligned_cols=64  Identities=20%  Similarity=0.276  Sum_probs=47.9

Q ss_pred             CEeceeecCCCCCCCCCC--HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS--DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~   72 (86)
                      ++||+++  |..||....  ..++...+..+.      .....|..++.++.+++.+||..+|++|++     +.++++
T Consensus       181 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         181 LLYELLT--GRPPFGEDDEDPMEIYNDILKGN------GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHh--CCCCcCCCCCCHHHHHHHHhccC------CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            3688998  689998765  555555444321      124556667899999999999999999999     888876

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG4645|consensus

Probab=98.54  E-value=1.2e-07  Score=69.02  Aligned_cols=65  Identities=14%  Similarity=0.231  Sum_probs=57.6

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      ++.||+|  |+-||++++ ..+|++.|..|..       ++.|...+++=.+++.+|+..||+.|.++.+|+.+-
T Consensus      1430 VVlEM~t--GkrPW~~~dne~aIMy~V~~gh~-------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1430 VVLEMAT--GKRPWAELDNEWAIMYHVAAGHK-------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             eEEEeec--CCCchhhccchhHHHhHHhccCC-------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            4789999  899999976 5689999998877       888988999999999999999999999998887753

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.53  E-value=1.7e-07  Score=59.39  Aligned_cols=63  Identities=17%  Similarity=0.266  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+...+...+..+.        ...|...+.++.+++.+||..+|++||     +..+++.+
T Consensus       184 il~ellt--g~~Pf~~~~~~~~~~~~~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         184 VMYEMMC--GRLPFYNQDHEKLFELILMEE--------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             hhhhhhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            5799999  789998887766666555432        345678899999999999999999999     78888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.52  E-value=9.8e-08  Score=60.69  Aligned_cols=63  Identities=21%  Similarity=0.193  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++..+.+++.+||..||.+|++     +.+++.+
T Consensus       204 il~ellt--g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        204 LLYEFIA--GYPPFFDDTPFRIYEKILAGR--------LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHhcCC--------cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            4789999  789999888777777766542        4556778899999999999999999987     6777754

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.51  E-value=1.4e-07  Score=58.51  Aligned_cols=66  Identities=23%  Similarity=0.261  Sum_probs=47.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+.......+.....     .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       205 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         205 MCIEMAE--GEPPYLREPPLRALFLITTKGI-----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcCC-----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            3688888  7899987766544444433211     1122233478999999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.50  E-value=1.2e-07  Score=57.12  Aligned_cols=66  Identities=21%  Similarity=0.344  Sum_probs=45.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+.....     .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       186 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         186 TAIELAE--GKPPYSELPPMKALFKIATNGP-----PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHHh--CCCCCCCCchHHHHHHHHhcCC-----CCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            3678888  6799988755444433332111     1122233448899999999999999999999998763

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.50  E-value=1.3e-07  Score=58.58  Aligned_cols=68  Identities=13%  Similarity=0.295  Sum_probs=44.4

Q ss_pred             CEeceeecCCCCCCCCCCHH--------HHHHHHHhhhhhccccCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ--------RVVEHISHFSRSTAKHIMLPQP-INCPKEIFDLMCECWQKHDSDRPNFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~--------~i~~~v~~~~~~~~~~~~~~~p-~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~   71 (86)
                      ++||+++  |..||......        .+...+.....    ......+ ..++.++.+++.+||..+|.+||++.+++
T Consensus       191 ~l~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~  264 (284)
T cd06620         191 SIIELAL--GKFPFAFSNIDDDGQDDPMGILDLLQQIVQ----EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLC  264 (284)
T ss_pred             HHHHHHh--CCCCCcccchhhhhhhhhhHHHHHHHHHhh----ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence            3688888  68999864431        12222222111    0012222 23788999999999999999999999999


Q ss_pred             HHH
Q psy10555         72 LFL   74 (86)
Q Consensus        72 ~~l   74 (86)
                      .+.
T Consensus       265 ~~~  267 (284)
T cd06620         265 AMP  267 (284)
T ss_pred             cCc
Confidence            863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.50  E-value=1.7e-07  Score=58.21  Aligned_cols=71  Identities=13%  Similarity=0.049  Sum_probs=46.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccC--------------CC-----CCCCCCcHHHHHHHHHHhccCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHI--------------ML-----PQPINCPKEIFDLMCECWQKHD   61 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~--------------~~-----~~p~~~~~~l~~l~~~Cw~~~p   61 (86)
                      ++||+++  +..||.+.+..+.+..+...........              ..     ...+.++..+.+++.+|+..+|
T Consensus       198 il~el~~--g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  275 (290)
T cd07862         198 IFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  275 (290)
T ss_pred             HHHHHHc--CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCc
Confidence            4789998  7899988776655555543211000000              00     0012466788999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy10555         62 SDRPNFREIHLF   73 (86)
Q Consensus        62 ~~Rps~~~l~~~   73 (86)
                      ++||++.+++++
T Consensus       276 ~~R~s~~~~l~h  287 (290)
T cd07862         276 AKRISAYSALSH  287 (290)
T ss_pred             hhcCCHHHHhcC
Confidence            999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.50  E-value=1.6e-07  Score=57.93  Aligned_cols=30  Identities=17%  Similarity=0.292  Sum_probs=26.5

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+..+.+++.+||..+|++||++.+++.+
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            357789999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.49  E-value=1.7e-07  Score=57.74  Aligned_cols=71  Identities=14%  Similarity=0.163  Sum_probs=45.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc----------cccCCCCC-----------CCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST----------AKHIMLPQ-----------PINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~----------~~~~~~~~-----------p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++||+++  +..||.+.+..+.+..+.......          ........           ....+.++.+++.+||..
T Consensus       188 ~l~el~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  265 (282)
T cd07831         188 VFFEILS--LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAY  265 (282)
T ss_pred             HHHHHHc--CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhcc
Confidence            4689998  689998876554443332211000          00000111           124678999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      +|.+||++.+++.+
T Consensus       266 ~P~~R~~~~~~l~~  279 (282)
T cd07831         266 DPDERITAKQALRH  279 (282)
T ss_pred             CcccccCHHHHhhC
Confidence            99999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.49  E-value=1.7e-07  Score=55.97  Aligned_cols=63  Identities=21%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             CEeceeecCCCCCCCC-CCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYED-FSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~-~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  +..||.. .+...+...+..+..       ...+.  .++.++.+++.+||..+|++||++.++++
T Consensus       175 ~l~~l~~--~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      175 ILYELLT--GKPPFPGDDQLLELFKKIGKPKP-------PFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHh--CCCCCCCCCcHHHHHHHHhccCC-------CCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            3678888  6799987 444555554443322       11111  18899999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.49  E-value=5.6e-08  Score=60.74  Aligned_cols=66  Identities=18%  Similarity=0.223  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+....+..+..+..     .....+...+..+.+++.+||..+|.+||++.+++.+
T Consensus       204 ll~~ll~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         204 MAIEMVE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHh--CCCCCCCCChhhheeehhcCCC-----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688888  6899987665433222222111     1122244567889999999999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.48  E-value=1.1e-07  Score=60.18  Aligned_cols=63  Identities=19%  Similarity=0.273  Sum_probs=49.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF-----REIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~-----~~l~~~   73 (86)
                      ++||+++  |+.||.+.+..++...+....        ...|..++.++.+++.+||..+|.+||++     .+++.+
T Consensus       185 il~~l~~--G~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         185 LLYEMLA--GQSPFEGDDEDELFQSILEDE--------VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHcCC--------CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            4689998  689998888777666655432        34466788999999999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.47  E-value=5.2e-08  Score=61.00  Aligned_cols=66  Identities=18%  Similarity=0.222  Sum_probs=46.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.......+..+..     .....|...+..+.+++.+||..+|++||++.+++.+
T Consensus       204 il~~l~t--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         204 MAIEMVE--GEPPYLNENPLRALYLIATNGT-----PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             HHHHHHh--CCCCCCCCCcchheeeeccCCC-----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688888  7899977654332222222111     1123456678899999999999999999999999884

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.47  E-value=1.3e-07  Score=57.51  Aligned_cols=65  Identities=17%  Similarity=0.274  Sum_probs=48.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCC--cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINC--PKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~--~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++  |..||......+....+..+.        ...|..+  +..+.+++.+||..+|.+||++..+...|+
T Consensus       190 ~~~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         190 ILYEFLV--GIPPFHGETPEEIFQNILNGK--------IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhcCC--------cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            3688888  789998887776666665432        2334444  899999999999999999999955554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.46  E-value=2.2e-07  Score=58.88  Aligned_cols=63  Identities=19%  Similarity=0.310  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||...+....+..+..+.        ...|..++.++.+++.+||..+|.+||     +..+++.+
T Consensus       189 il~ell~--G~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         189 LMYDMLT--GAPPFTAENRKKTIDKILKGK--------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            4789998  789999888776666665532        345677899999999999999999999     78887664

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.46  E-value=2.4e-07  Score=58.91  Aligned_cols=30  Identities=10%  Similarity=0.313  Sum_probs=27.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|++||++.+++.+
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            467899999999999999999999999876

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.46  E-value=1.6e-07  Score=56.90  Aligned_cols=58  Identities=26%  Similarity=0.256  Sum_probs=45.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR   68 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~   68 (86)
                      ++||+++  +..||...+...+...+..+        ....|...+..+.+++.+||..+|++||++.
T Consensus       182 ~~~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         182 LLYEMLT--GKPPFYAEDRKEIYEKILKD--------PLRFPEFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence            3688898  68999877765555555442        1455777899999999999999999999994

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.45  E-value=2.4e-07  Score=58.71  Aligned_cols=63  Identities=16%  Similarity=0.302  Sum_probs=49.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..++...+..+.        ...|..++.++.+++.+||..+|.+||     ++.+++.+
T Consensus       190 il~el~~--G~~pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         190 LIYEMLV--GESPFPGDDEEEVFDSIVNDE--------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            4789998  789999888777766665432        334667899999999999999999999     56666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.45  E-value=2.3e-07  Score=57.01  Aligned_cols=65  Identities=18%  Similarity=0.391  Sum_probs=45.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP----INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p----~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+....+..+.....      ....+    ..++..+.+++.+||..+|.+||++.+++.+
T Consensus       201 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         201 VVLEMFA--GRRPWSDEEAIAAMFKLGNKRS------APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHHHHh--CCCCCcCcchHHHHHHhhcccc------CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            3688998  6899977655443333322111      12222    3468899999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.44  E-value=2e-07  Score=58.27  Aligned_cols=63  Identities=17%  Similarity=0.133  Sum_probs=51.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+++..+..+.        ...|...+..+.+++.+||..||.+|++     +.+++.+
T Consensus       187 il~~l~~--g~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         187 LIYEMLV--GYPPFFDDNPFGIYEKILAGK--------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            4789998  789999888777777776542        3456677899999999999999999995     8888765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.44  E-value=5e-07  Score=57.27  Aligned_cols=63  Identities=17%  Similarity=0.270  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||.+.+...+...+..+.        ...|...+.++.+++.+||..+|.+|+     ++.+++.+
T Consensus       185 il~el~t--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         185 VMYEMMC--GRLPFYNQDHEKLFELILMEE--------IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             eeeeecc--CCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            5899999  789998887776666554422        344677899999999999999999996     89988764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.44  E-value=2.2e-07  Score=58.02  Aligned_cols=66  Identities=23%  Similarity=0.374  Sum_probs=45.4

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||..... .+.+..+.....     ...+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       207 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         207 SLVELAT--GQFPYKNCKTEFEVLTKILQEEP-----PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHh--CCCCCCcchhHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            4789998  6899976432 334433333211     1122223478899999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.43  E-value=2.8e-07  Score=57.66  Aligned_cols=66  Identities=12%  Similarity=0.127  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+....+..+.....     .........+..+..++.+||..+|.+||++.+++.+
T Consensus       207 il~el~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         207 MVIEMID--GEPPYFNEPPLQAMRRIRDNLP-----PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcCC-----CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            3688998  6899988776665555443221     1122223567889999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.43  E-value=2.5e-07  Score=56.96  Aligned_cols=30  Identities=13%  Similarity=0.182  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|.+||++.+++.+
T Consensus       251 ~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         251 NASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            467889999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.43  E-value=5.8e-07  Score=57.11  Aligned_cols=68  Identities=15%  Similarity=0.206  Sum_probs=49.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||...+..+....+.......   ..+...   ..++.++.+++.+||..+|.+||++.+++.+
T Consensus       187 il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         187 MLYEFLC--GFPPFSGSTPNETWENLKYWKETL---QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHhhhhh--CCCCCCCCCHHHHHHHHHhccccc---cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            4789999  789999888777666555422100   001111   2468899999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.43  E-value=2.4e-07  Score=55.98  Aligned_cols=65  Identities=18%  Similarity=0.294  Sum_probs=47.4

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.... .......+..+      ......|...+..+.+++.+||..+|.+||++.+++.+
T Consensus       192 il~~l~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         192 TVIEMAT--GKPPWSELGNPMAALYKIGSS------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             HHHHHHh--CCCCCCCCCchHHHHHhcccc------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            3678888  679998765 33333333321      12245567789999999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.42  E-value=3e-07  Score=58.19  Aligned_cols=63  Identities=19%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-------CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-------NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-------s~~~l~~~   73 (86)
                      ++||+++  |+.||...+..+++..+..+.        ...|..++.++.+++.+|+..+|.+|+       ++.+++.+
T Consensus       185 il~el~t--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         185 LMYEMMA--GQPPFEADNEDDLFESILHDD--------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            4789999  789999888877777666532        334567889999999999999999999       77777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.42  E-value=3e-07  Score=56.41  Aligned_cols=68  Identities=13%  Similarity=0.158  Sum_probs=43.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.................   ..........++..+.+++.+||..+|++||++.+++.+
T Consensus       198 il~~l~~--~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         198 TAIELAE--LQPPMFDLHPMRALFLMTKSNF---QPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHHHhc--CCCCcccccchhhHHhhhccCC---CCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            3688888  6789876654433332222111   000011112467889999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4279|consensus

Probab=98.42  E-value=2.7e-07  Score=64.50  Aligned_cols=65  Identities=18%  Similarity=0.379  Sum_probs=53.7

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |+.||.|  |++||..+. ++..+++|..-..      -+++|...+++...++.+|+..+|.+||++.+++..
T Consensus       767 T~vEMAT--GrPPF~ElgspqAAMFkVGmyKv------HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  767 TMVEMAT--GRPPFVELGSPQAAMFKVGMYKV------HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             eeEeecc--CCCCeeecCChhHhhhhhcceec------CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            5789999  899999876 5556777755332      267788999999999999999999999999999763

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.41  E-value=4.3e-07  Score=56.87  Aligned_cols=66  Identities=12%  Similarity=0.121  Sum_probs=48.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.........+..+..     .........+..+.+++.+||..+|.+||++.+++.+
T Consensus       205 il~el~t--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         205 MVIEMVD--GEPPYFNEPPLKAMKMIRDNLP-----PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhhCC-----cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            3688998  6899988766555554443221     1122334578899999999999999999999999884

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.41  E-value=1.7e-07  Score=59.15  Aligned_cols=62  Identities=23%  Similarity=0.267  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC---HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN---FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps---~~~l~~   72 (86)
                      ++||+++  |..||.+.+..++...+..+.        ...|..++.++.+++.+||..+|.+|++   +.+++.
T Consensus       182 il~el~t--g~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         182 LLYEMLT--GLPPFYDENVNEMYRKILQEP--------LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHHh--CCCCcCCCCHHHHHHHHHcCC--------CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            4689998  789999887776666555421        3456778899999999999999999986   455554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=1.9e-07  Score=58.07  Aligned_cols=67  Identities=9%  Similarity=0.111  Sum_probs=46.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.......+.....    ......+...+..+.+++.+||..||.+||     ++.+++.+
T Consensus       190 ~l~el~~--g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         190 LIYEMIE--GKSPFRQRKEKVKREEVERRVK----EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHHH--CCCCCCCCchhhHHHHHHHHhh----hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            4689998  6899987654333222222111    011333556889999999999999999999     88888664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=2.8e-07  Score=56.30  Aligned_cols=64  Identities=16%  Similarity=0.139  Sum_probs=45.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI   70 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l   70 (86)
                      ++||+++  |..||...+...+...+..+...    .....+..++.++.+++.+||..+|++||++..+
T Consensus       182 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  245 (260)
T cd05611         182 VIFEFLF--GYPPFHAETPDAVFDNILSRRIN----WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGY  245 (260)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhcccC----CCCcccccCCHHHHHHHHHHccCCHHHccCCCcH
Confidence            3688898  78999888777766666543220    1112234678999999999999999999966433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.40  E-value=3.1e-07  Score=57.94  Aligned_cols=65  Identities=20%  Similarity=0.226  Sum_probs=45.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.......+.....      ........+..+.+++.+||..+|.+||++.+++.+
T Consensus       209 il~el~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         209 TCIELAE--RKPPLFNMNAMSALYHIAQNDS------PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHhcCC------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688888  6799988765544444433211      011123567789999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.39  E-value=5.1e-07  Score=56.61  Aligned_cols=66  Identities=14%  Similarity=0.169  Sum_probs=47.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||...+..+....+.....     .....+...+.++.+++.+||..+|.+||++.+++.+
T Consensus       206 il~el~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         206 MVIEMVD--GEPPYFSDSPVQAMKRLRDSPP-----PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhccCC-----CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            3688998  6899987766555544433211     1122234577899999999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.39  E-value=2.1e-07  Score=56.84  Aligned_cols=62  Identities=16%  Similarity=0.270  Sum_probs=44.7

Q ss_pred             CEeceeecCCCCCCCCCCH---HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH--HHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD---QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF--REIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~---~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~--~~l~~   72 (86)
                      ++||+++  |..||...+.   ..+......        .....|...+.++.+++.+||..+|.+||++  .+++.
T Consensus       188 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         188 TAYECLR--GKRPYRGHSRTIRDQIRAKQET--------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HHHHHHh--CCCCCCCCCccHHHHHHHHhcc--------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            3688888  7899987663   333322221        1245567788999999999999999999999  66543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.38  E-value=4.3e-07  Score=56.47  Aligned_cols=67  Identities=19%  Similarity=0.347  Sum_probs=43.1

Q ss_pred             CEeceeecCCCCCCCCC-----CHHHHHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDF-----SDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~-----~~~~i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |..||...     ...+....+......    .....+   ...+..+.+++.+||..+|.+||++.+++.
T Consensus       192 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         192 TLLEVAQ--NRFPFPPEGEPPLGPIELLSYIVNMPNP----ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHh--CCCCCCcccCCCCChHHHHHHHhcCCch----hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            3689998  68999765     223333333321110    000001   134578999999999999999999999988


Q ss_pred             H
Q psy10555         73 F   73 (86)
Q Consensus        73 ~   73 (86)
                      +
T Consensus       266 ~  266 (287)
T cd06621         266 H  266 (287)
T ss_pred             C
Confidence            4

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.37  E-value=1e-06  Score=55.93  Aligned_cols=63  Identities=13%  Similarity=0.102  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC----CHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP----NFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp----s~~~l~~   72 (86)
                      ++|||++  |..||...+..+++..+..+..      +.+ ....+.++.+++.+||..+|.+||    ++.+++.
T Consensus       186 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~------~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         186 LVFEMCC--GWSPFYAEDTQQMYRNIAFGKV------RFP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             EEEEecc--CCCCCCCCCHHHHHHHHHcCCC------CCC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            5899999  7899998887777766655432      121 235788999999999999999998    5666655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.37  E-value=2.9e-07  Score=58.34  Aligned_cols=57  Identities=19%  Similarity=0.279  Sum_probs=46.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      ++||+++  |..||...+..+++..+..+.        ...|...+.++.+++.+|+..+|.+|++.
T Consensus       185 il~el~~--g~~Pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         185 LLYEMLC--GHAPFEAENEDDLFEAILNDE--------VVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            4789998  689999888877777665432        34456788999999999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.37  E-value=1.4e-06  Score=55.26  Aligned_cols=66  Identities=14%  Similarity=0.347  Sum_probs=48.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||...+....+..+....+.    ...+.....+.++.+++..|+. +|.+|+++.+++.+
T Consensus       198 il~el~~--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         198 IAYEMIY--GRSPFHEGTSAKTYNNIMNFQRF----LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             eeeeecc--CCCCCCCCCHHHHHHHHHcCCCc----cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            5899999  78999887776666666543220    1122233578899999999997 99999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.37  E-value=3.8e-07  Score=56.02  Aligned_cols=62  Identities=19%  Similarity=0.338  Sum_probs=47.2

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH----HHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF----REIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~----~~l~~~   73 (86)
                      +||+++  +..||...+.......+....        ...|...+..+.+++.+||..+|.+||++    .+++.+
T Consensus       212 l~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         212 IYQMLT--GKPPFRGSNEYLTFQKILKLE--------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             HHHHHh--CCCCCCCccHHHHHHHHHhcC--------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            678888  689998776555544444321        34566788999999999999999999999    777653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.37  E-value=3.7e-07  Score=57.86  Aligned_cols=29  Identities=14%  Similarity=0.327  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++..+.+++.+||..||.+||++.+++.+
T Consensus       279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         279 FSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             cCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence            46789999999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.36  E-value=3.6e-07  Score=57.90  Aligned_cols=62  Identities=16%  Similarity=0.318  Sum_probs=48.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH-HHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR-EIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~-~l~~   72 (86)
                      ++||+++  |..||.+.+..++...+..+.        +..|..++.++.+++.+||..+|.+|+++. ++..
T Consensus       185 il~el~~--G~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         185 LLYEMLI--GQSPFHGHDEEELFQSIRMDN--------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            4789998  689999888777666655421        334556889999999999999999999997 5644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.36  E-value=3.3e-07  Score=57.97  Aligned_cols=62  Identities=18%  Similarity=0.290  Sum_probs=48.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH-HHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR-EIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~-~l~~   72 (86)
                      ++||+++  |..||.+.+..++...+...        .+..|..++.++.+++.+||..+|.+|+++. ++..
T Consensus       185 il~ell~--G~~Pf~~~~~~~~~~~i~~~--------~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         185 LLYEMLI--GQSPFHGEDEDELFDSILND--------RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            4789998  68999988877776666532        1445677889999999999999999999875 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.36  E-value=3.4e-07  Score=57.92  Aligned_cols=61  Identities=20%  Similarity=0.297  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH-HHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR-EIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~-~l~   71 (86)
                      ++||+++  |..||.+.+..++...+..+.        +..|..++.++.+++.+||..+|.+|+++. ++.
T Consensus       185 il~el~~--g~~Pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         185 LLYEMLI--GQSPFHGDDEDELFESIRVDT--------PHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            4789998  689998887777666654321        344567889999999999999999999974 555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.35  E-value=4.6e-07  Score=57.67  Aligned_cols=63  Identities=16%  Similarity=0.250  Sum_probs=49.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..++...+..+.        ...|..++.++.+++.+|+..+|.+|+     ++.+++.+
T Consensus       184 il~ellt--G~~Pf~~~~~~~~~~~~~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         184 VMYEMMC--GRLPFYNQDHEKLFELILMED--------IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHhccCC--------ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            4789998  789998877766665554322        345678899999999999999999997     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.34  E-value=4.3e-07  Score=56.07  Aligned_cols=64  Identities=22%  Similarity=0.418  Sum_probs=43.9

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQP-INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p-~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  ++.||.... ..+.+..+..+..       ...| ..++.++.+++.+||..+|.+||++.+++.+
T Consensus       196 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         196 TMIELAT--GRFPYDSWKTPFQQLKQVVEEPS-------PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHh--CCCCCCccccCHHHHHHHHhcCC-------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688898  689997533 2222222222211       2222 3578999999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.32  E-value=7.6e-07  Score=55.17  Aligned_cols=29  Identities=17%  Similarity=0.095  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++.++.+++.+|+..+|++||++.+++++
T Consensus       256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         256 LSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            67789999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.32  E-value=7.1e-07  Score=56.13  Aligned_cols=65  Identities=20%  Similarity=0.264  Sum_probs=46.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps----~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.......+....      ...+.....+.++.+++.+||..+|++||+    +.+++.+
T Consensus       221 ll~~l~~--g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         221 LLYEMLY--GTTPFKGSNRDETFSNILKKE------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHHHhh--CCCCCCCCchHHHHHHHhcCC------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            4789998  789998877655444443211      112222236899999999999999999999    7777774

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.31  E-value=8.5e-07  Score=56.87  Aligned_cols=63  Identities=14%  Similarity=0.085  Sum_probs=51.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+...++..+..+.        ...|...+.++.+++.+|+..+|.+|+     ++.+++++
T Consensus       217 il~ell~--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        217 FIYEILV--GCPPFYANEPLLIYQKILEGI--------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            4789999  789999888777777766543        334677889999999999999999995     89988775

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.31  E-value=5.2e-07  Score=55.20  Aligned_cols=65  Identities=18%  Similarity=0.277  Sum_probs=44.8

Q ss_pred             CEeceeecCCCCCCCCCCH---HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD---QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~---~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.....   ...+..+...      ......|...+.++.+++.+||..+|.+||++.+++.+
T Consensus       197 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         197 VIIEMAT--AKPPWNAEKHSNHLALIFKIASA------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             HHHHHHh--CCCCCCCCCCcchHHHHHHHhcc------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            3678888  6899975432   2222222211      11244556778999999999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.31  E-value=6.6e-07  Score=56.63  Aligned_cols=30  Identities=20%  Similarity=0.115  Sum_probs=27.3

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|++||++.+++.+
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            467788999999999999999999999875

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.29  E-value=4.7e-07  Score=56.36  Aligned_cols=67  Identities=7%  Similarity=0.117  Sum_probs=45.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++||+++  |+.||...+.......+......    .....+...+.++.+++.+||..+|.+|++     +.+++++
T Consensus       190 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         190 LIYEMIQ--GQSPFRKRKERVKREEVDRRVKE----DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHHHh--CCCCCCCCCcchhHHHHHHHhhc----ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            4789998  78999875432222222211110    113345678899999999999999999997     7888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.28  E-value=6.9e-07  Score=55.45  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=45.6

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++||+++  |..||...+    ...+...+...        ..+.|..++..+.+++.+||..+|.+||++.++...|+.
T Consensus       197 il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         197 LTFELLT--GASPFTVDGEQNSQSEISRRILKS--------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             HHHHHHh--CCCCcccCcccchHHHHHHHHHcc--------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            3688998  679986432    12222222221        134456788999999999999999999998877766654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.28  E-value=7.8e-07  Score=55.39  Aligned_cols=63  Identities=19%  Similarity=0.201  Sum_probs=47.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||...+.......+..+.        ...|...+..+.+++.+||..+|.+|+     ++.+++.+
T Consensus       187 il~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         187 LIYEMLA--GYPPFFDDNPIQIYEKILEGK--------VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhcCC--------ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            3688888  689998877655555554332        345667789999999999999999999     77777643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.27  E-value=5.7e-07  Score=57.07  Aligned_cols=63  Identities=17%  Similarity=0.271  Sum_probs=49.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||...+...+...+....        ...|..++.++.+++.+||..+|.+|+     +..+++.+
T Consensus       184 il~ell~--g~~Pf~~~~~~~~~~~~~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         184 VMYEMMC--GRLPFYNQDHERLFELILMEE--------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            4789998  789998877766665554322        344677899999999999999999998     78887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.27  E-value=1.2e-06  Score=54.12  Aligned_cols=30  Identities=13%  Similarity=0.082  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|.+||++.+++.+
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            467889999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.27  E-value=1.1e-06  Score=54.33  Aligned_cols=30  Identities=20%  Similarity=0.376  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++..+.+++.+||..+|++||++.+++.+
T Consensus       254 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         254 KLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             CcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            567889999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.27  E-value=1.2e-06  Score=54.08  Aligned_cols=31  Identities=13%  Similarity=0.091  Sum_probs=26.9

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..+..+.+++.+||..+|.+||++.+++.+
T Consensus       250 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            3456789999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.26  E-value=1.4e-06  Score=53.88  Aligned_cols=30  Identities=10%  Similarity=0.051  Sum_probs=26.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|.+||++.+++.+
T Consensus       252 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         252 PLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             cCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            467788999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.26  E-value=6.8e-07  Score=56.65  Aligned_cols=62  Identities=21%  Similarity=0.383  Sum_probs=49.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH-----HHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF-----REIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~-----~~l~~   72 (86)
                      ++||+++  |+.||.+.+..+++..+....        ...|...+.++.+++.+||..+|.+|++.     .++..
T Consensus       190 il~ellt--G~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         190 LLYEMLA--GQPPFDGEDEDELFQSIMEHN--------VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            4789998  689999888777776665432        34466788999999999999999999976     56654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.25  E-value=1.1e-06  Score=54.76  Aligned_cols=30  Identities=20%  Similarity=0.079  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++..+.+++.+||..+|.+||++.+++.+
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            468899999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.25  E-value=1.6e-06  Score=54.97  Aligned_cols=58  Identities=19%  Similarity=0.193  Sum_probs=46.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR   68 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~   68 (86)
                      ++|||++  |..||.+.+..++...+..+.        ...++..+..+.+++.+|+..+|.+||+..
T Consensus       185 il~ell~--g~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         185 VLYEMLY--GLPPFYSRDTAEMYDNILNKP--------LRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             hhhhhhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            5799998  789999888777766665432        233456789999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG1023|consensus

Probab=98.25  E-value=1.1e-06  Score=59.03  Aligned_cols=75  Identities=21%  Similarity=0.391  Sum_probs=54.4

Q ss_pred             EeceeecCCCCCCCCC----CHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDF----SDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~----~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||++  ++.||...    .+.+++..+..+..   ...++...  ...+.++..++.+||..+|.+||++..+...++
T Consensus       148 ~~ei~~--r~~~~~~~~~~~~~~eii~~~~~~~~---~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~  222 (484)
T KOG1023|consen  148 MYEILF--RSGPFDLRNLVEDPDEIILRVKKGGS---NPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL  222 (484)
T ss_pred             HHHHHh--ccCccccccccCChHHHHHHHHhcCC---CCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence            578888  78999862    34567777766222   22233322  145668999999999999999999999999988


Q ss_pred             HhhcCC
Q psy10555         76 RKNLGY   81 (86)
Q Consensus        76 ~~~~~~   81 (86)
                      .+....
T Consensus       223 ~~~~~~  228 (484)
T KOG1023|consen  223 TINKGG  228 (484)
T ss_pred             hhcccc
Confidence            876643

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.25  E-value=8.3e-07  Score=58.80  Aligned_cols=71  Identities=14%  Similarity=0.101  Sum_probs=46.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhh-hhcc--------------------ccCCCCCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFS-RSTA--------------------KHIMLPQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~-~~~~--------------------~~~~~~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |..||.+.+..+.+..+.+.. .+..                    .......|...+.++.+|+.+||..
T Consensus       260 il~ellt--G~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~  337 (440)
T PTZ00036        260 IIAEMIL--GYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY  337 (440)
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCC
Confidence            4789998  789998876544333332210 0000                    0000112345678999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      +|.+|+++.+++.+
T Consensus       338 dP~~R~ta~e~l~h  351 (440)
T PTZ00036        338 EPLKRLNPIEALAD  351 (440)
T ss_pred             ChhHCcCHHHHhCC
Confidence            99999999999865

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.25  E-value=1.1e-06  Score=56.20  Aligned_cols=34  Identities=12%  Similarity=0.062  Sum_probs=29.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHh
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      ..+.++.+++.+||..+|.+||++.+++.+  ++..
T Consensus       268 ~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         268 KASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence            456788999999999999999999999865  5554

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.25  E-value=1.4e-06  Score=53.73  Aligned_cols=29  Identities=10%  Similarity=0.028  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++.++.+++.+||..+|.+||++.+++.+
T Consensus       256 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         256 IDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            37889999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.24  E-value=1.4e-06  Score=55.58  Aligned_cols=29  Identities=17%  Similarity=0.462  Sum_probs=26.5

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+++.+||..+|++||++.+++.+
T Consensus       271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         271 FGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             cCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence            56789999999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.24  E-value=1.1e-06  Score=55.79  Aligned_cols=36  Identities=14%  Similarity=0.244  Sum_probs=29.4

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHhhc
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRKNL   79 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~~~   79 (86)
                      .++..+.+++.+||..+|++||++.+++.+  +..+..
T Consensus       279 ~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         279 TFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             hhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence            356788999999999999999999999764  444433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.24  E-value=1.3e-06  Score=54.45  Aligned_cols=67  Identities=10%  Similarity=0.109  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++||+++  |..||.+.........+......    .....+..++.++.+++.+||..+|.+||+     +.+++.+
T Consensus       190 ~l~~l~~--g~~P~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         190 LIYEMIE--GQSPFRGRKEKVKREEVDRRVLE----TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhhhc----cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            3688998  68999876654333333221110    012334568889999999999999999999     7777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.24  E-value=1.4e-06  Score=54.06  Aligned_cols=30  Identities=13%  Similarity=0.117  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|.+||++.+++.+
T Consensus       262 ~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         262 DLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             ccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            467889999999999999999999998763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0579|consensus

Probab=98.23  E-value=2e-06  Score=59.85  Aligned_cols=66  Identities=24%  Similarity=0.358  Sum_probs=55.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||.||..  +++|+..+++..|+-.|.+.     .++.+..|+..+....+++.+|+..||..||++++|+++
T Consensus       224 TLIEMAq--iEPPHhelnpMRVllKiaKS-----ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  224 TLIEMAQ--IEPPHHELNPMRVLLKIAKS-----EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             HHHHHhc--cCCCccccchHHHHHHHhhc-----CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            4678887  78999999998887777652     445566688899999999999999999999999999875

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.22  E-value=1.6e-06  Score=55.42  Aligned_cols=30  Identities=13%  Similarity=0.017  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+..+.+++.+|+..+|.+||++.+++.+
T Consensus       269 ~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         269 GANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             cCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            357889999999999999999999999774

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.22  E-value=2e-06  Score=53.11  Aligned_cols=30  Identities=20%  Similarity=0.122  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+|+..+|.+||++.+++.+
T Consensus       253 ~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         253 DASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            456889999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.21  E-value=1e-06  Score=55.29  Aligned_cols=28  Identities=14%  Similarity=0.339  Sum_probs=25.2

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+||..+|++||++.+++.+
T Consensus       268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         268 SEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             HHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            3578899999999999999999999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.20  E-value=2.9e-06  Score=54.02  Aligned_cols=66  Identities=24%  Similarity=0.375  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-~~~l~~~   73 (86)
                      ++|||++  |..||...+.......+.....    ....+....++.++.+++.+|+. +|.+|++ +.+++.+
T Consensus       219 il~ell~--g~~Pf~~~~~~~~~~~i~~~~~----~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         219 ILYEMLY--GFPPFYSDTLQETYNKIINWKE----SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             hhhhhcc--CCCCCCCCCHHHHHHHHhccCC----cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            4799999  7899998877666655554111    11122223468999999999997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.20  E-value=2.3e-06  Score=54.11  Aligned_cols=34  Identities=18%  Similarity=0.109  Sum_probs=29.4

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHh
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      ..+.++.+++.+||..+|.+||++.+++.+  ++.+
T Consensus       260 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         260 GASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            367889999999999999999999999885  5543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.20  E-value=1.1e-06  Score=54.52  Aligned_cols=62  Identities=18%  Similarity=0.253  Sum_probs=41.4

Q ss_pred             CEeceeecCCCCCCCCCCH----HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD----QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~----~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~   71 (86)
                      ++||+++  |..||.....    .++........       ........+.++.+++.+||..+|.+||++.+++
T Consensus       183 ~l~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         183 SIYEMVA--GRTPFKDHKEKVAKEELKRRTLEDE-------VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHHh--CCCCCCCCcchhhHHHHHHHhhccc-------cccccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence            4789998  6899976432    22222222111       1111245789999999999999999999996654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.20  E-value=2.2e-06  Score=53.35  Aligned_cols=29  Identities=14%  Similarity=0.103  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+||..+|++||++.+++.+
T Consensus       262 ~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         262 LSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             CChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            47789999999999999999999999763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.20  E-value=1.7e-06  Score=60.13  Aligned_cols=66  Identities=17%  Similarity=0.175  Sum_probs=50.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+....++...+.....     ..+.....++..+.+++..||..+|.+||++.+++.+
T Consensus       569 il~Ellt--G~~pf~~~~~~~~~~~il~~~~-----~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         569 CLFEFLT--GIPPFNDETPQQVFQNILNRDI-----PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhcCC-----CCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            4789999  7899998887776666544221     1122234677889999999999999999999999886

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.19  E-value=2.6e-06  Score=53.27  Aligned_cols=39  Identities=10%  Similarity=-0.003  Sum_probs=31.4

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHhhcCCC
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRKNLGYN   82 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~~~~~~   82 (86)
                      .++.++.+++.+|+..+|.+||++.+++.+  ++.+...++
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~  297 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIH  297 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhh
Confidence            467889999999999999999999999873  554444443

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0588|consensus

Probab=98.18  E-value=2.1e-06  Score=59.37  Aligned_cols=62  Identities=23%  Similarity=0.270  Sum_probs=55.6

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||.+++  |+.||.+-+...++..|++|.        ..+|...+.+.++|+.+++..||.+|-+..+|+++
T Consensus       202 LfALLt--G~LPFdDdNir~LLlKV~~G~--------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  202 LFALLT--GKLPFDDDNIRVLLLKVQRGV--------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHh--CCCCCCCccHHHHHHHHHcCc--------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            566778  789999888888888998875        57789999999999999999999999999999987

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.18  E-value=2.1e-06  Score=52.62  Aligned_cols=64  Identities=19%  Similarity=0.253  Sum_probs=44.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+....+..+...      +..+..|...+..+.+++.+||. +|.+||++.+++.+
T Consensus       198 il~el~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         198 TVVEMLT--EKPPWAEFEAMAAIFKIATQ------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             HHHHHhh--CCCCCCccchHHHHHHHhcC------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            4689998  68999876554433333221      11233455677888999999995 89999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.18  E-value=2e-06  Score=53.02  Aligned_cols=29  Identities=17%  Similarity=0.009  Sum_probs=25.1

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+||..+|.+||++.+++.+
T Consensus       256 ~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         256 ICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             hhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence            34677899999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.18  E-value=3.4e-06  Score=53.56  Aligned_cols=63  Identities=24%  Similarity=0.256  Sum_probs=45.4

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~   71 (86)
                      ++||+++  |..||....    ...+...+...        .+..|...+..+.+++.+||..+|++||     ++.+++
T Consensus       196 il~ellt--g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l  265 (332)
T cd05614         196 LIFELLT--GASPFTLEGERNTQSEVSRRILKC--------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIK  265 (332)
T ss_pred             hhhhhhc--CCCCCCCCCCCCCHHHHHHHHhcC--------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHH
Confidence            5799999  789996432    23333333321        1445667889999999999999999999     777887


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       266 ~h  267 (332)
T cd05614         266 EH  267 (332)
T ss_pred             cC
Confidence            64

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.18  E-value=2.8e-06  Score=52.41  Aligned_cols=28  Identities=18%  Similarity=0.228  Sum_probs=25.5

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+||..+|.+||++.+++.+
T Consensus       253 ~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         253 SPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             CHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            6789999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.17  E-value=2e-06  Score=55.51  Aligned_cols=31  Identities=13%  Similarity=0.165  Sum_probs=27.5

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+.++.+++.+|+..||.+||++.+++.+
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            3457889999999999999999999999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.16  E-value=1.5e-06  Score=55.03  Aligned_cols=57  Identities=21%  Similarity=0.361  Sum_probs=46.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      ++||+++  |..||.+.+...+...+..+.        ...|...+.++.+++.+|+..+|.+|++.
T Consensus       190 il~ellt--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         190 LLYEMLA--GQAPFEGEDEDELFQSIMEHN--------VAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            4789999  689999888777777666532        34466788999999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.16  E-value=1.3e-06  Score=62.43  Aligned_cols=33  Identities=18%  Similarity=0.322  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      .++.+++.+||..+|++||++.++++.|+++..
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            467789999999999999999999999998755

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.15  E-value=1.8e-06  Score=53.35  Aligned_cols=29  Identities=14%  Similarity=0.310  Sum_probs=26.3

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      .++.++.+++.+||..+|++||++.+++.
T Consensus       256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         256 KVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             ccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            35788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.15  E-value=2.1e-06  Score=54.05  Aligned_cols=30  Identities=20%  Similarity=0.475  Sum_probs=27.4

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|++||++.+++.+
T Consensus       258 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         258 AFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            367789999999999999999999999886

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.15  E-value=2e-06  Score=54.76  Aligned_cols=30  Identities=17%  Similarity=0.152  Sum_probs=27.2

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|++||++.+++.+
T Consensus       263 ~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         263 NADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             ccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            356789999999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.15  E-value=2.4e-06  Score=52.73  Aligned_cols=30  Identities=13%  Similarity=-0.004  Sum_probs=26.3

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+..+.+++.+||..+|.+||++.+++.+
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            456788999999999999999999998753

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.13  E-value=3.2e-06  Score=52.65  Aligned_cols=30  Identities=13%  Similarity=0.149  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+..+.+++.+||..+|.+||++.+++.+
T Consensus       253 ~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         253 AASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            346788999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.13  E-value=3.3e-06  Score=53.70  Aligned_cols=30  Identities=13%  Similarity=0.112  Sum_probs=27.5

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|.+||++.+++.+
T Consensus       266 ~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         266 KASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            368899999999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.13  E-value=3.1e-06  Score=53.71  Aligned_cols=71  Identities=13%  Similarity=0.091  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcccc-C------------CC-------CCCCCCcHHHHHHHHHHhccC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKH-I------------ML-------PQPINCPKEIFDLMCECWQKH   60 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~-~------------~~-------~~p~~~~~~l~~l~~~Cw~~~   60 (86)
                      ++||+++  +..||.+.+..+.+..+.......... .            ..       .....++.++.+++.+||..+
T Consensus       223 ~l~el~t--g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  300 (335)
T PTZ00024        223 IFAELLT--GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLN  300 (335)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCC
Confidence            4689998  689998877655444433211100000 0            00       001245778999999999999


Q ss_pred             CCCCCCHHHHHHH
Q psy10555         61 DSDRPNFREIHLF   73 (86)
Q Consensus        61 p~~Rps~~~l~~~   73 (86)
                      |.+||++.+++.+
T Consensus       301 P~~R~s~~~~l~~  313 (335)
T PTZ00024        301 PLERISAKEALKH  313 (335)
T ss_pred             chhccCHHHHhcC
Confidence            9999999999874

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.13  E-value=2.3e-06  Score=61.70  Aligned_cols=62  Identities=15%  Similarity=0.239  Sum_probs=45.3

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      +||||++  +..||...+. .+++..+..+.       ..+ ....+.++.+||..||..+|.+||++.+++.
T Consensus       232 ILYELLT--Gk~PF~~~~~~~qli~~lk~~p-------~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        232 IIYELCS--GKTPFHKANNFSQLISELKRGP-------DLP-IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHH--CCCCCCcCCcHHHHHHHHhcCC-------CCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            4789999  7899987553 34444443321       121 2356889999999999999999999999985

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.12  E-value=3.2e-06  Score=53.89  Aligned_cols=35  Identities=17%  Similarity=0.049  Sum_probs=30.4

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHh
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      +.++.++.+++.+||..+|.+||++.+++.+  +..+
T Consensus       261 ~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         261 PHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            3578889999999999999999999999987  5543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.12  E-value=2e-06  Score=53.59  Aligned_cols=63  Identities=16%  Similarity=0.199  Sum_probs=43.6

Q ss_pred             CEeceeecCCCCCCCCCCHH---HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ---RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~---~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~   72 (86)
                      ++||+++  |..||......   .....+.....       ...+..++.++.+++.+||..+|.+|++     +.++++
T Consensus       190 ~l~~l~~--g~~Pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         190 LLYEMIA--GQSPFQQRKKKIKREEVERLVKEVQ-------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHh--CCCCCCCCCccchHHHHHhhhhhhh-------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            3688998  68999864322   12222211111       2235678899999999999999999999     788877

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.12  E-value=3.4e-06  Score=53.01  Aligned_cols=30  Identities=17%  Similarity=0.108  Sum_probs=27.2

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+|+..+|.+||++.+++.+
T Consensus       257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         257 RLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             CCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            467889999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.12  E-value=2.7e-06  Score=52.69  Aligned_cols=65  Identities=14%  Similarity=0.297  Sum_probs=42.2

Q ss_pred             CEeceeecCCCCCCCCCCHH-------HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-------RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-------~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||......       +....+....     .... .....+.++.+++.+||..+|++||++.+++.+
T Consensus       182 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         182 SFMELAL--GRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL-PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHh--CCCCchhhcccccccchHHHHHHHhccC-----CCCC-CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            3688998  68999753211       1222221110     0011 123467889999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.11  E-value=3.5e-06  Score=52.92  Aligned_cols=71  Identities=17%  Similarity=0.118  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccc-------------cCCCC-CC--------CCCcHHHHHHHHHHhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAK-------------HIMLP-QP--------INCPKEIFDLMCECWQ   58 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~-------------~~~~~-~p--------~~~~~~l~~l~~~Cw~   58 (86)
                      ++||+++  +..||.+.+..+.+..+.........             ..... .+        ...+....+++.+|+.
T Consensus       198 il~el~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~  275 (309)
T cd07845         198 ILAELLA--HKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLM  275 (309)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhc
Confidence            3689998  68999887766655544431110000             00000 00        1246778899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy10555         59 KHDSDRPNFREIHLF   73 (86)
Q Consensus        59 ~~p~~Rps~~~l~~~   73 (86)
                      .||.+||++.+++.+
T Consensus       276 ~dp~~R~t~~~il~h  290 (309)
T cd07845         276 YDPKKRATAEEALES  290 (309)
T ss_pred             CChhhCcCHHHHhcC
Confidence            999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.11  E-value=5.3e-06  Score=50.89  Aligned_cols=64  Identities=16%  Similarity=0.236  Sum_probs=46.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+......+..+...      +.++..|...+..+.+++.+||. ++..||+..+++.+
T Consensus       198 il~~l~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         198 TVVEMLT--EKPPWAEYEAMAAIFKIATQ------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HHHHHHh--CCCCCCccCHHHHHHHHHcC------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            3688998  68999887654433333221      11244567788999999999999 57999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.11  E-value=3.8e-06  Score=53.66  Aligned_cols=30  Identities=17%  Similarity=0.171  Sum_probs=27.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|.+||++.+++.+
T Consensus       271 ~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         271 GVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             CCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            467889999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.10  E-value=4.2e-06  Score=51.50  Aligned_cols=29  Identities=21%  Similarity=0.155  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+||..+|.+||++.+++.+
T Consensus       251 ~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         251 LDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             ccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            46789999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0575|consensus

Probab=98.09  E-value=5.7e-06  Score=56.38  Aligned_cols=62  Identities=19%  Similarity=0.326  Sum_probs=53.1

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||-++.  |++||..-+..+.+.+|....        ...|...+.+..+||.+.+..+|.+|||+.+++.+
T Consensus       208 mYtLL~--G~PPFetk~vkety~~Ik~~~--------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  208 MYTLLV--GRPPFETKTVKETYNKIKLNE--------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHhhhh--CCCCcccchHHHHHHHHHhcC--------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            455666  689999888888999998754        35678899999999999999999999999999875

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.09  E-value=4.6e-06  Score=53.04  Aligned_cols=30  Identities=17%  Similarity=0.224  Sum_probs=27.3

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|++||++.+++.+
T Consensus       265 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         265 KASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            467899999999999999999999998874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.09  E-value=2.9e-06  Score=53.81  Aligned_cols=59  Identities=19%  Similarity=0.223  Sum_probs=46.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFRE   69 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~   69 (86)
                      ++|||++  |..||.+.+..+.+..+....        ...++..+..+.+++.+|+..+|.+|+++.+
T Consensus       185 il~el~~--g~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         185 VLYEMLY--GLPPFYSRNTAEMYDNILNKP--------LQLKPNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHhCC--------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            4789998  789999888777666654421        2334578899999999999999999998763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0591|consensus

Probab=98.08  E-value=4e-06  Score=53.28  Aligned_cols=64  Identities=16%  Similarity=0.220  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP-INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p-~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||+.  -..||.+.+-.++...|.+|..       ++.| ...+.++.+++..|...|++.||+...++..
T Consensus       217 llyEMca--L~~PF~g~n~~~L~~KI~qgd~-------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d  281 (375)
T KOG0591|consen  217 LLYEMCA--LQSPFYGDNLLSLCKKIEQGDY-------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD  281 (375)
T ss_pred             HHHHHHh--cCCCcccccHHHHHHHHHcCCC-------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence            3689999  5699999988888888988755       4455 5678899999999999999999995444443

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.07  E-value=4.4e-06  Score=53.06  Aligned_cols=57  Identities=21%  Similarity=0.368  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      ++||+++  |..||.+.+...+...+..+.        ...|..++.++.+++.+|+..+|.+|++.
T Consensus       190 il~ellt--G~~pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         190 LLYEMLA--GQPPFDGEDEDELFQSIMEHN--------VSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            4789998  789999888777776665532        34466788999999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.07  E-value=5.9e-06  Score=52.42  Aligned_cols=58  Identities=17%  Similarity=0.201  Sum_probs=45.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR   68 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~   68 (86)
                      ++|||++  |..||...+..++...+..+.        ...++..+..+.+++.+|+..+|.+||++.
T Consensus       185 il~el~~--G~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         185 VLYEMLY--GLPPFYCRDVAEMYDNILHKP--------LVLRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             eehhhhc--CCCCCCCCCHHHHHHHHHcCC--------ccCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence            5899998  789999888777766665432        233456788999999999999999999774

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.07  E-value=4.6e-06  Score=52.76  Aligned_cols=58  Identities=21%  Similarity=0.260  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR   68 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~   68 (86)
                      ++|||++  |..||...+..++...+..+.        ...|...+.++.+++.+|+..+|.+|++..
T Consensus       185 il~el~~--g~~pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         185 VLYEMLY--GLPPFYSRDVSQMYDNILHKP--------LQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             hhhhhhc--CCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            4799998  789999888776666665421        345667889999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.06  E-value=5.4e-06  Score=51.69  Aligned_cols=30  Identities=10%  Similarity=0.007  Sum_probs=26.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.+..+++.+|+..+|.+|+|+.+++++
T Consensus       256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         256 RLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             CCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            456788999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0589|consensus

Probab=98.06  E-value=7.7e-06  Score=54.25  Aligned_cols=63  Identities=19%  Similarity=0.220  Sum_probs=55.4

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +|||++  -+.+|...+...++..+.++..       .+.|...+.++..++..|+..+|..||++.+++..
T Consensus       196 ~yEm~~--lk~aF~a~~m~~Li~ki~~~~~-------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  196 LYEMCT--LKPAFKASNMSELILKINRGLY-------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHh--cccccCccchHHHHHHHhhccC-------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            688888  6799999988888888887654       56788899999999999999999999999999875

>KOG1006|consensus

Probab=98.06  E-value=1.1e-05  Score=51.01  Aligned_cols=67  Identities=24%  Similarity=0.461  Sum_probs=48.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCC---CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPIN---CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~---~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||+|+.|  |..||.+++.  +..++++....  +...+..+..   .+..+..++..|+-.+-.+||.+.++++.
T Consensus       258 TL~EvAt--G~fPyr~w~s--vfeql~~Vv~g--dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  258 TLYEVAT--GNFPYRKWDS--VFEQLCQVVIG--DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             eEeeeec--CCCCcchHHH--HHHHHHHHHcC--CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            6899999  8999998765  34444432210  2223333433   67889999999999999999999998764

>KOG0584|consensus

Probab=98.04  E-value=3.5e-06  Score=57.66  Aligned_cols=62  Identities=16%  Similarity=0.282  Sum_probs=51.2

Q ss_pred             EeceeecCCCCCCCC-CCHHHHHHHHHhhhhhccccCCCCC-CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYED-FSDQRVVEHISHFSRSTAKHIMLPQ-PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~-~~~~~i~~~v~~~~~~~~~~~~~~~-p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |.||+|  .++||.. .++.+|+..|..|.+       +.. ...-.+++.++|.+|... ..+|+++.+++.+
T Consensus       233 mLEMvT--~eYPYsEC~n~AQIYKKV~SGiK-------P~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  233 MLEMVT--SEYPYSECTNPAQIYKKVTSGIK-------PAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHh--ccCChhhhCCHHHHHHHHHcCCC-------HHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            579999  8999987 568899999998865       221 234468999999999999 9999999999874

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.04  E-value=6.9e-06  Score=50.77  Aligned_cols=30  Identities=13%  Similarity=-0.054  Sum_probs=26.8

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+||..+|.+|||+.+++.+
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            467888999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.04  E-value=4e-06  Score=52.07  Aligned_cols=63  Identities=14%  Similarity=0.202  Sum_probs=43.3

Q ss_pred             CEeceeecCCCCCCCCCCHH----HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ----RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~----~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~   71 (86)
                      ++||+++  ++.||...+..    .+...+...        ....|..++.++.+++.+||..+|++|+     ++.+++
T Consensus       186 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l  255 (280)
T cd05608         186 TLYEMIA--ARGPFRARGEKVENKELKQRILND--------SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLR  255 (280)
T ss_pred             HHHHHHh--CCCCCCCCCcchhHHHHHHhhccc--------CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHh
Confidence            4689998  78999764321    222222111        1334567889999999999999999999     667777


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       256 ~h  257 (280)
T cd05608         256 TH  257 (280)
T ss_pred             cC
Confidence            64

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.03  E-value=4e-06  Score=51.81  Aligned_cols=65  Identities=18%  Similarity=0.254  Sum_probs=41.7

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHL   72 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~   72 (86)
                      +||+++  |+.||...........+.....    ......+...+.++.+++.+||..+|.+||     ++.+++.
T Consensus       184 l~~l~~--g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         184 LYEMIA--GRSPFRQRKEKVEKEELKRRTL----EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHhh--CCCCCCCCcccccHHHHHhccc----cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            678888  6899976543111111211111    011334567789999999999999999999     6666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.02  E-value=2.1e-06  Score=52.22  Aligned_cols=67  Identities=24%  Similarity=0.350  Sum_probs=43.2

Q ss_pred             CEeceeecCCCCCCCCCCHH---HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ---RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~---~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||...+..   ..+.........    .........+.++.+++..||..+|++||++.+++++
T Consensus       188 il~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  188 ILYELLT--GKLPFEESNSDDQLEIIEKILKRPLP----SSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHHHHHH--SSSSSTTSSHHHHHHHHHHHHHTHHH----HHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             ccccccc--cccccccccchhhhhhhhhccccccc----ccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            3688998  67999887432   222222221110    0011112334899999999999999999999998753

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0983|consensus

Probab=98.01  E-value=1.7e-05  Score=50.50  Aligned_cols=66  Identities=20%  Similarity=0.395  Sum_probs=49.2

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |++|++|  |..||.+.+. =+++..|.+.     .++.++.-..++....+++..|+..|+.+||...+++++
T Consensus       283 TlveLaT--g~yPy~~c~tdFe~ltkvln~-----ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  283 TLVELAT--GQYPYKGCKTDFEVLTKVLNE-----EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             chhhhhc--ccCCCCCCCccHHHHHHHHhc-----CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            5789999  8999998553 3566666552     222232223478999999999999999999999998764

>KOG0592|consensus

Probab=97.98  E-value=1.2e-05  Score=54.67  Aligned_cols=63  Identities=19%  Similarity=0.367  Sum_probs=55.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||.|++  |.+||.+.+...+.+.|....        ...|+..+..+.+|+.+-+..||.+|.+..+|..+
T Consensus       276 ilyQmla--G~PPFra~NeyliFqkI~~l~--------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  276 ILYQMLA--GQPPFRAANEYLIFQKIQALD--------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHHhc--CCCCCccccHHHHHHHHHHhc--------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            3678888  799999999888888887644        46788999999999999999999999999999876

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.97  E-value=1.1e-05  Score=50.27  Aligned_cols=30  Identities=17%  Similarity=0.068  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+|+..+|++||++.+++.+
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        255 TLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             CCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            457788999999999999999999999874

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=97.97  E-value=6.2e-06  Score=52.47  Aligned_cols=63  Identities=14%  Similarity=0.276  Sum_probs=42.9

Q ss_pred             CEeceeecCCCCCCCCCC--------H-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----
Q psy10555          1 TLWEILTFAREQPYEDFS--------D-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----   66 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--------~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----   66 (86)
                      ++||+++  |..||....        . ..+...+..+        ....|..++.++.+++.+|+..+|.+|++     
T Consensus       185 ~l~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~  254 (329)
T cd05588         185 LMFEMMA--GRSPFDIVGMSDNPDQNTEDYLFQVILEK--------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQT  254 (329)
T ss_pred             HHHHHHH--CCCCcccccccccccccchHHHHHHHHcC--------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCC
Confidence            4688998  789996321        1 1122223221        13456778899999999999999999997     


Q ss_pred             -HHHHHHH
Q psy10555         67 -FREIHLF   73 (86)
Q Consensus        67 -~~~l~~~   73 (86)
                       +.+++.+
T Consensus       255 ~~~~i~~h  262 (329)
T cd05588         255 GFRDIKSH  262 (329)
T ss_pred             CHHHHhcC
Confidence             5676543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=97.97  E-value=8.6e-06  Score=50.82  Aligned_cols=29  Identities=14%  Similarity=0.024  Sum_probs=25.1

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ....+.+++.+|+..+|.+||+..+++.+
T Consensus       280 ~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         280 LGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             CChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            34678899999999999999999988753

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.97  E-value=9.6e-06  Score=52.10  Aligned_cols=29  Identities=14%  Similarity=0.058  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+|+..+|++||++.+++.+
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            45678999999999999999999999885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.93  E-value=1.7e-05  Score=49.15  Aligned_cols=30  Identities=10%  Similarity=-0.074  Sum_probs=26.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++..+.+++.+|+..||++||++.+++.+
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         256 EIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             CcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            467788999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.92  E-value=7.6e-06  Score=50.85  Aligned_cols=64  Identities=16%  Similarity=0.291  Sum_probs=44.0

Q ss_pred             CEeceeecCCCCCCCCCCHH--HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ--RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~--~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++||+++  |..||......  .........       .....|..++.++.+++.+||..+|.+|+     ++.+++++
T Consensus       185 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         185 MLFKLLR--GHSPFRQHKTKDKHEIDRMTLT-------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHHh--CCCCcCCCCCcCHHHHHHHhhc-------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            3688888  68999764321  111111111       11344667889999999999999999999     59988875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.92  E-value=1.6e-05  Score=49.62  Aligned_cols=28  Identities=11%  Similarity=0.012  Sum_probs=24.6

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..+.+++.+||..+|.+||++.+++.+
T Consensus       280 ~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         280 DPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            4567899999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=97.92  E-value=9.8e-06  Score=51.63  Aligned_cols=63  Identities=13%  Similarity=0.261  Sum_probs=42.4

Q ss_pred             CEeceeecCCCCCCCCCC---------HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----
Q psy10555          1 TLWEILTFAREQPYEDFS---------DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----   66 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---------~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----   66 (86)
                      ++||+++  |..||....         ...+...+...        ....|...+..+.+++.+||..+|.+|++     
T Consensus       185 il~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~  254 (329)
T cd05618         185 LMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQT  254 (329)
T ss_pred             HHHHHhh--CCCCCccCCCcCCcccccHHHHHHHHhcC--------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCC
Confidence            4688998  689995311         11122223221        13456778899999999999999999998     


Q ss_pred             -HHHHHHH
Q psy10555         67 -FREIHLF   73 (86)
Q Consensus        67 -~~~l~~~   73 (86)
                       +.+++.+
T Consensus       255 ~~~~i~~h  262 (329)
T cd05618         255 GFADIQGH  262 (329)
T ss_pred             CHHHHhcC
Confidence             4566543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.91  E-value=8.9e-06  Score=52.34  Aligned_cols=28  Identities=18%  Similarity=0.127  Sum_probs=25.3

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..+.+++.+|+..||.+|||+.+++.+
T Consensus       291 ~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         291 ASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             cHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            4578899999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0615|consensus

Probab=97.91  E-value=1.7e-05  Score=52.48  Aligned_cols=64  Identities=19%  Similarity=0.160  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||-+++  |.+||++..... +.++|.+|..       ...|   ...+.+...|+...+..||++|||+.|.+++
T Consensus       370 vLfvcLs--G~pPFS~~~~~~sl~eQI~~G~y-------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  370 VLFVCLS--GYPPFSEEYTDPSLKEQILKGRY-------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             eEEEEec--cCCCcccccCCccHHHHHhcCcc-------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            3566777  789999865444 7888888766       2233   3578899999999999999999999999874

>KOG0033|consensus

Probab=97.90  E-value=1.3e-05  Score=50.33  Aligned_cols=57  Identities=19%  Similarity=0.171  Sum_probs=47.4

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         10 REQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        10 ~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      |.+||.+.+...++++|.+|...      .+.|  +..+++..+|+.+++..||.+|-|+.|.++
T Consensus       208 G~~PF~~~~~~rlye~I~~g~yd------~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  208 GYPPFWDEDQHRLYEQIKAGAYD------YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CCCCCCCccHHHHHHHHhccccC------CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            57999999999999999987652      2222  367788999999999999999999998765

>PTZ00284 protein kinase; Provisional

Probab=97.90  E-value=7.5e-06  Score=54.52  Aligned_cols=27  Identities=19%  Similarity=0.229  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.+|+.+|+..||++||++.+++.+
T Consensus       412 ~~~~dli~~mL~~dP~~R~ta~e~L~H  438 (467)
T PTZ00284        412 DLLCDLIYGLLHYDRQKRLNARQMTTH  438 (467)
T ss_pred             HHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence            456799999999999999999999874

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.90  E-value=9.2e-06  Score=50.19  Aligned_cols=66  Identities=21%  Similarity=0.293  Sum_probs=43.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHH-HHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRV-VEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i-~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-~~~l~~~   73 (86)
                      ++||+++  |..||.......+ ...+.....     .....+...+..+.+++.+||..+|.+|++ +++++++
T Consensus       195 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        195 LTYELLT--GKHPFKEDEDEELDLESLLKRQQ-----KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             HHHHHHH--CCCCCCCCCcchhhHHHHHHhhc-----ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            3688888  6899976543221 111111100     113334578899999999999999999995 6888753

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.89  E-value=1.6e-05  Score=50.91  Aligned_cols=29  Identities=14%  Similarity=0.074  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+++.+|+..+|.+|||+.+++.+
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            34678999999999999999999999885

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=97.89  E-value=1.2e-05  Score=51.31  Aligned_cols=29  Identities=14%  Similarity=0.036  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+|+..+|.+||++.+++.+
T Consensus       270 ~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         270 ANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            45668899999999999999999999875

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.88  E-value=1.5e-05  Score=51.09  Aligned_cols=29  Identities=10%  Similarity=0.053  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+|+..+|.+||++.+++.+
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            45678899999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.86  E-value=1.6e-05  Score=49.37  Aligned_cols=63  Identities=14%  Similarity=0.238  Sum_probs=45.0

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~   72 (86)
                      ++||+++  |..||.+..   ...+.... ..       .....|..++.++.+++.+|+..+|.+|+     ++.++++
T Consensus       185 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         185 MLFKLLR--GHSPFRQHKTKDKHEIDRMT-LT-------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHh--CCCCCCCCCccchHHHHHHh-hc-------cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            4688998  689998753   22222111 11       12445667789999999999999999999     9999986


Q ss_pred             H
Q psy10555         73 F   73 (86)
Q Consensus        73 ~   73 (86)
                      +
T Consensus       255 ~  255 (278)
T cd05606         255 H  255 (278)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=97.86  E-value=1.4e-05  Score=50.79  Aligned_cols=63  Identities=13%  Similarity=0.241  Sum_probs=42.8

Q ss_pred             CEeceeecCCCCCCCCC------CHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC------H
Q psy10555          1 TLWEILTFAREQPYEDF------SDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN------F   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~------~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps------~   67 (86)
                      ++||+++  |..||...      +..+ +...+...        ....|...+..+.+++.+|+..+|.+|++      +
T Consensus       185 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  254 (327)
T cd05617         185 LMFEMMA--GRSPFDIITDNPDMNTEDYLFQVILEK--------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGF  254 (327)
T ss_pred             HHHHHHh--CCCCCCccCCCcccccHHHHHHHHHhC--------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCH
Confidence            4689998  68999632      2222 22333221        13456678899999999999999999997      4


Q ss_pred             HHHHHH
Q psy10555         68 REIHLF   73 (86)
Q Consensus        68 ~~l~~~   73 (86)
                      .++..+
T Consensus       255 ~~i~~h  260 (327)
T cd05617         255 SDIKSH  260 (327)
T ss_pred             HHHHcC
Confidence            566553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=97.85  E-value=2.4e-05  Score=49.86  Aligned_cols=30  Identities=17%  Similarity=0.078  Sum_probs=27.3

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++..+.+++.+||..+|++||++.+++.+
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            467899999999999999999999999775

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0580|consensus

Probab=97.83  E-value=2.8e-05  Score=48.35  Aligned_cols=62  Identities=21%  Similarity=0.268  Sum_probs=53.1

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+|++.  |.+||.+.+..+.+.+|.+..        ...|+..+.+..++|.+|...+|.+|.+..+++.+
T Consensus       212 ~yeflv--g~ppFes~~~~etYkrI~k~~--------~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  212 CYEFLV--GLPPFESQSHSETYKRIRKVD--------LKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHHHh--cCCchhhhhhHHHHHHHHHcc--------ccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            467777  689999988888898887632        56688999999999999999999999999998875

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=97.82  E-value=2.5e-05  Score=50.66  Aligned_cols=65  Identities=23%  Similarity=0.310  Sum_probs=48.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSD--RPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~--Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+....+..+..+..      ....|.  ..+.++.+++.+|+..+|.+  |+++.+++.+
T Consensus       236 ilyellt--G~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         236 FLYEMLV--GDTPFYADSLVGTYSKIMDHKN------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHHh--CCCCcCCCCHHHHHHHHHcCCC------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            4689998  7899998877666666654321      122233  57899999999999988887  9999999775

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0583|consensus

Probab=97.82  E-value=3.1e-05  Score=50.68  Aligned_cols=61  Identities=20%  Similarity=0.206  Sum_probs=50.8

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCC-cHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINC-PKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~-~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ||-|++  |..||.+.+...++..+..+.        ...|..+ +.++..++.+|+..+|..|+++.+|+.
T Consensus       213 Ly~ml~--G~~PF~d~~~~~l~~ki~~~~--------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  213 LYVLLC--GRLPFDDSNVPNLYRKIRKGE--------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HHHHHh--CCCCCCCccHHHHHHHHhcCC--------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            456666  689999988777777776653        4667777 999999999999999999999999984

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=97.81  E-value=3.2e-05  Score=49.14  Aligned_cols=30  Identities=17%  Similarity=0.096  Sum_probs=26.7

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+..+.+++.+|+..+|.+||++.+++.+
T Consensus       263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         263 NANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            357889999999999999999999999764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=97.80  E-value=1.8e-05  Score=49.15  Aligned_cols=63  Identities=19%  Similarity=0.234  Sum_probs=43.0

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~   71 (86)
                      ++||+++  |..||...+    ...+...+...        ..+.|..++..+.+++.+||..+|.+|+     +..+++
T Consensus       197 ~l~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~  266 (290)
T cd05613         197 LMYELLT--GASPFTVDGEKNSQAEISRRILKS--------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK  266 (290)
T ss_pred             HHHHHhc--CCCCCCcCCccccHHHHHHHhhcc--------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence            3688888  679986432    22232222221        1344667889999999999999999997     677776


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       267 ~~  268 (290)
T cd05613         267 KH  268 (290)
T ss_pred             cC
Confidence            64

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0582|consensus

Probab=97.78  E-value=2.4e-05  Score=52.19  Aligned_cols=69  Identities=14%  Similarity=0.219  Sum_probs=44.7

Q ss_pred             eceeecCCCCCCCCCCHHHHHHHHHhhhhhccc--cCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          3 WEILTFAREQPYEDFSDQRVVEHISHFSRSTAK--HIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         3 ~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~--~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .|+.+  |..||..+.+.++.-+=.++.-+...  +.........+..+..++..|+..||.+||++++++++
T Consensus       223 ~ELA~--G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  223 CELAH--GHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             HHHhc--CCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            47777  78999999887765322222110000  00000012356678899999999999999999999885

>KOG0574|consensus

Probab=97.78  E-value=5.3e-06  Score=53.37  Aligned_cols=65  Identities=18%  Similarity=0.258  Sum_probs=51.9

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      -.||..  |++||+++++...+++|...     .++....|...+++..+++..|+..+|++|-++..+.++
T Consensus       219 aIEMAE--G~PPYsDIHPMRAIFMIPT~-----PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  219 AIEMAE--GRPPYSDIHPMRAIFMIPTK-----PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hhhhhc--CCCCcccccccceeEeccCC-----CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            357777  78999999998888777652     222334467788999999999999999999999988776

>KOG2345|consensus

Probab=97.77  E-value=5.3e-06  Score=51.78  Aligned_cols=35  Identities=17%  Similarity=0.216  Sum_probs=32.0

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ...+..+.++++.|...||.+||+..+++..++.+
T Consensus       266 ~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  266 SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            34889999999999999999999999999998875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=97.73  E-value=4.5e-05  Score=47.81  Aligned_cols=29  Identities=14%  Similarity=0.006  Sum_probs=25.5

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+++.+|+..+|.+|+|+.+++.+
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCHHHHhcC
Confidence            34678899999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0603|consensus

Probab=97.68  E-value=2.1e-05  Score=53.94  Aligned_cols=61  Identities=20%  Similarity=0.152  Sum_probs=48.9

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||||++  |..||..-... ++..++..          ++....++.+..+|++.|++.+|.+|+++.++..+
T Consensus       502 lLy~ML~--G~tp~~~~P~~~ei~~~i~~----------~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  502 LLYEMLT--GRTLFAAHPAGIEIHTRIQM----------PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             HHHHHHh--CCCccccCCchHHHHHhhcC----------CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            4789999  78999876544 56666654          33347889999999999999999999999998764

>KOG0596|consensus

Probab=97.67  E-value=1.9e-05  Score=53.93  Aligned_cols=64  Identities=16%  Similarity=0.262  Sum_probs=40.9

Q ss_pred             EeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCc-HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCP-KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~-~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||+|+-  |++||.+... ..-+..|..-      ....+.|.--+ .++.++|+.|+..||.+||+..+++.+
T Consensus       562 LYqMvY--gktPf~~~~n~~aKl~aI~~P------~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  562 LYQMVY--GKTPFGQIINQIAKLHAITDP------NHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHHh--cCCchHHHHHHHHHHHhhcCC------CccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            567774  4899987543 2222233320      01123333222 348999999999999999999999875

>KOG0598|consensus

Probab=97.65  E-value=4.2e-05  Score=49.58  Aligned_cols=63  Identities=21%  Similarity=0.232  Sum_probs=51.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC----CHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP----NFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp----s~~~l~~   72 (86)
                      ++|||++  |..||.+.+...++..+.++..       ...|...+.+..+++.+.+..+|++|-    ++.+|..
T Consensus       214 llYeML~--G~pPF~~~~~~~~~~~I~~~k~-------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  214 LLYEMLT--GKPPFYAEDVKKMYDKILKGKL-------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR  280 (357)
T ss_pred             HHHHHhh--CCCCCcCccHHHHHHHHhcCcC-------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence            4789999  7899999999999999987653       344556889999999999999999994    5666544

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.64  E-value=3.8e-05  Score=48.10  Aligned_cols=30  Identities=17%  Similarity=0.109  Sum_probs=26.2

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+|+..+|.+||++.+++.+
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            455678999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=97.63  E-value=3.3e-05  Score=49.51  Aligned_cols=29  Identities=10%  Similarity=-0.006  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+++.+|+..+|.+||++.+++.+
T Consensus       272 ~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         272 ANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             CCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            57789999999999999999999999875

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.57  E-value=7.7e-05  Score=48.69  Aligned_cols=29  Identities=14%  Similarity=0.152  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+++.+|+..+|.+||++.+++.+
T Consensus       347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        347 MHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            46678899999999999999999999875

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.56  E-value=9.7e-05  Score=45.91  Aligned_cols=28  Identities=21%  Similarity=0.233  Sum_probs=24.9

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+|+..+|.+|||+.+++.+
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            5678899999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.56  E-value=6.1e-05  Score=49.35  Aligned_cols=40  Identities=20%  Similarity=0.282  Sum_probs=31.5

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHhhcCCCCC
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRKNLGYNPE   84 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~~~~~~~~   84 (86)
                      .+.++.+++.+|+..+|.+|||+.+++.+  +..+...+.+.
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~  389 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNP  389 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCC
Confidence            46688999999999999999999999874  55554444443

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.54  E-value=9.5e-05  Score=45.89  Aligned_cols=26  Identities=15%  Similarity=-0.049  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      .++.+++.+|+..+|++||++.+++.
T Consensus       262 ~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         262 PHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhHHHHHHHHhccCcccccCHHHHhc
Confidence            67789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=97.53  E-value=0.00026  Score=45.81  Aligned_cols=66  Identities=18%  Similarity=0.279  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC---CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP---NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp---s~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+....+.....    ....+....++.++.+++.+|+ .+|.+|+   ++.+++.+
T Consensus       233 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         233 ILYEMLV--GQPPFLADTPAETQLKVINWET----TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             eeeehhh--CCCCCCCCCHHHHHHHHhccCc----cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            5899999  7899998876665555443211    1112222357888999998876 5999999   88998775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=97.52  E-value=0.00017  Score=46.88  Aligned_cols=67  Identities=16%  Similarity=0.353  Sum_probs=45.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHH--HhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCE--CWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~--Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||...+..+....+.....    ....+.....+.+..+++.+  |+..++..|+++.+++.+
T Consensus       237 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         237 ILFEMLV--GQPPFLAPTPTETQLKVINWEN----TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHHHHHh--CCCCCcCCCHHHHHHHHHcccc----ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            4789998  7899988766554444432111    01122223578889999987  667777789999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=97.51  E-value=8.6e-05  Score=47.54  Aligned_cols=30  Identities=10%  Similarity=-0.006  Sum_probs=26.8

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++..+.+++.+|+..+|.+||++.+++.+
T Consensus       269 ~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         269 NANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             CCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            567789999999999999999999999853

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=97.50  E-value=0.00016  Score=46.11  Aligned_cols=68  Identities=15%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhcc--CCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK--HDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~--~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+..+.+..+.....   ....+..+..++.++.+++.+|+..  ++..|+++.+++.+
T Consensus       197 il~ell~--g~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         197 CMYEMLY--GETPFYAESLVETYGKIMNHKE---RFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHhCCCc---cccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            4789998  7899998887776666654321   0111222345789999999998754  44457899998876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.50  E-value=0.00019  Score=46.11  Aligned_cols=64  Identities=20%  Similarity=0.227  Sum_probs=46.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSDRPN---FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~Rps---~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+....+.....      ....|.  .++.++.+++.+|+. +|.+|++   +.+++.+
T Consensus       228 il~el~~--G~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         228 IMYEMLV--GYPPFCSDNPQETYRKIINWKE------TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             HHHHhhc--CCCCCCCCCHHHHHHHHHcCCC------ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            4789998  7899998887766665554221      122232  467899999999986 9999998   8887664

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0577|consensus

Probab=97.44  E-value=0.00023  Score=49.55  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=51.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |+.|+..  +++|+.+|+....++.|.+..-     +.++ ....+.....++..|+..-|.+|||..+++++
T Consensus       214 TCIELAE--RkPPlFnMNAMSALYHIAQNes-----PtLq-s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  214 TCIELAE--RKPPLFNMNAMSALYHIAQNES-----PTLQ-SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             hhhhhhh--cCCCccCchHHHHHHHHHhcCC-----CCCC-CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            4567778  8899999998777778876432     1122 35688889999999999999999999999875

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=97.41  E-value=0.00021  Score=51.67  Aligned_cols=72  Identities=14%  Similarity=0.169  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-NFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-s~~~l~~~l~~~~~   79 (86)
                      ++|||++  |..||.......+.......     .+........++..+.+++.+|+..+|++|+ ++.++...|+....
T Consensus       220 ILyELLT--G~~PF~~~~~~ki~~~~~i~-----~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        220 ILYQMLT--LSFPYRRKKGRKISYRDVIL-----SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             HHHHHHH--CCCCCCCcchhhhhhhhhcc-----ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            4789999  78999875544332221110     0000111236788999999999999999995 56667777776533

>KOG4717|consensus

Probab=97.34  E-value=0.00011  Score=50.39  Aligned_cols=61  Identities=20%  Similarity=0.306  Sum_probs=51.0

Q ss_pred             ceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          4 EILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         4 Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .|+-+| +.||...+..+-+-+|....        ...|..++.+..+||+.++..+|.+|.+.++|...
T Consensus       210 yMLVCG-q~PFqeANDSETLTmImDCK--------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  210 YMLVCG-QPPFQEANDSETLTMIMDCK--------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             HHHHhC-CCccccccchhhhhhhhccc--------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            344456 89999988888888887644        46688999999999999999999999999999763

>KOG0599|consensus

Probab=97.34  E-value=9.9e-05  Score=47.12  Aligned_cols=64  Identities=14%  Similarity=0.189  Sum_probs=48.7

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ||-++.  |.+||......-+..+|.+|...      ...|  .+.+++..+|+.+|++.||.+|-|..+.+.+
T Consensus       218 myTLLa--GcpPFwHRkQmlMLR~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  218 MYTLLA--GCPPFWHRKQMLMLRMIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHHHHc--CCCchhHHHHHHHHHHHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            344555  67999887666667788887652      2223  3567889999999999999999999999875

>KOG0616|consensus

Probab=97.32  E-value=0.00018  Score=46.14  Aligned_cols=53  Identities=21%  Similarity=0.255  Sum_probs=47.7

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCC
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDR   64 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~R   64 (86)
                      +|||+.  |.+||...+..++++.|..|.        ...|+.++.++.+|+.+.++.|-.+|
T Consensus       231 IYEMla--G~pPF~~~~~~~iY~KI~~~~--------v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  231 IYEMLA--GYPPFYDDNPIQIYEKILEGK--------VKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHc--CCCCCcCCChHHHHHHHHhCc--------ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence            689998  789999999999999999875        46789999999999999999988888

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=97.31  E-value=0.00032  Score=45.28  Aligned_cols=65  Identities=20%  Similarity=0.315  Sum_probs=44.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHH--HhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCE--CWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~--Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+.+..+.....      ....|+  ..+.+..+++.+  |...++..||++.+++.+
T Consensus       225 il~ell~--G~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         225 IMYEMLI--GYPPFCSETPQETYKKVMNWKE------TLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCcC------cccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            4789998  7899998887777766654221      122232  356788888876  444455678999999886

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.29  E-value=0.00034  Score=47.04  Aligned_cols=29  Identities=17%  Similarity=0.285  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+|+.+|+..||.+||++.+++.+
T Consensus       427 ~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        427 LDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             ccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            34578899999999999999999999875

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=97.28  E-value=0.0006  Score=43.49  Aligned_cols=68  Identities=16%  Similarity=0.200  Sum_probs=44.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhc--cCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQ--KHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~--~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+.+..+.....   ....+.....++..+.+++.+|+.  .++..|+++.+++.+
T Consensus       197 ~l~el~~--g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         197 CMYEMLY--GETPFYAESLVETYGKIMNHKE---HFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHcCCC---cccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            4789998  6899988776666555543211   000111223478899999998764  344458899988876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=97.26  E-value=0.0011  Score=42.77  Aligned_cols=64  Identities=17%  Similarity=0.264  Sum_probs=44.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSDRPN---FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~Rps---~~~l~~~   73 (86)
                      ++|||++  |..||.+.+.......+.....      ....|+  ..+.++.+++.++. .+|.+|++   +.+++.+
T Consensus       225 ilyel~t--G~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         225 IMYEMLI--GYPPFCSETPQETYRKVMNWKE------TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH  293 (360)
T ss_pred             eeeeccc--CCCCCCCCCHHHHHHHHHcCCC------ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence            5899999  7899998887776666654211      122232  36788899988865 49999985   6676654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=97.24  E-value=0.00047  Score=44.82  Aligned_cols=68  Identities=22%  Similarity=0.353  Sum_probs=46.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCC--CCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDS--DRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~--~Rps~~~l~~~l   74 (86)
                      ++|||++  |..||.+.+....+..+.....    ....+.+...+..+.+++.+|+...+.  .|+++.+++.+.
T Consensus       236 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         236 FLYEMLV--GDTPFYADSLVGTYSKIMNHKN----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCCC----cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            4789998  7899998877666666654321    011222346789999999999974443  378999988753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=97.24  E-value=0.0005  Score=44.69  Aligned_cols=65  Identities=22%  Similarity=0.327  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCC--CCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDS--DRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~--~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+....+..+.....      ....|  ...+..+.+++.+|+..++.  .|+++.+++.+
T Consensus       236 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         236 FLFEMLV--GDTPFYADSLVGTYSKIMDHKN------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCc------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            4789998  7899998877666666654321      12333  34688899999999975544  48999999886

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.20  E-value=0.00027  Score=50.15  Aligned_cols=28  Identities=14%  Similarity=-0.019  Sum_probs=24.1

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ......++..||..+|.+||++.+++.+
T Consensus       238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        238 WPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             CHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            3556788899999999999999999764

>KOG1989|consensus

Probab=97.19  E-value=0.00027  Score=49.88  Aligned_cols=40  Identities=18%  Similarity=0.130  Sum_probs=35.4

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCCC
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYN   82 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~~   82 (86)
                      +..+..++.||..|+..+|++||++-+++..+.++...-.
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~  316 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC  316 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence            5678999999999999999999999999999988765533

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.14  E-value=0.00062  Score=44.17  Aligned_cols=66  Identities=18%  Similarity=0.299  Sum_probs=43.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN---FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps---~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+....+.....    ....+.....+.+..+++.++. .+|.+|++   +.+++.+
T Consensus       237 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         237 ILYEMLV--GQPPFLAQTPLETQMKVINWQT----SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHccCC----CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            4789999  7899998776655544443221    0112222356788888887764 58999987   8887654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=97.13  E-value=0.0012  Score=42.11  Aligned_cols=65  Identities=15%  Similarity=0.216  Sum_probs=44.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSD--RPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~--Rps~~~l~~~   73 (86)
                      ++|||++  |..||...+..+.+..+.....      +.+.|   ..++.++.+++.+|+...+.+  |+++.+++.+
T Consensus       197 il~ell~--g~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         197 CMYEMLY--GETPFYAESLVETYGKIMNHEE------RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             hhhhhhh--CCCCccCCCHHHHHHHHHcCCC------cccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            5789998  7899988777666655543211      12223   346889999999998765443  5678887764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.12  E-value=0.0014  Score=42.52  Aligned_cols=64  Identities=20%  Similarity=0.243  Sum_probs=44.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCC---CCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSD---RPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~---Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+.+..+.....      ....|  ...+.++.+++.+|.. +|.+   |+++.+++.+
T Consensus       237 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~------~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         237 IMFECLI--GWPPFCSENSHETYRKIINWRE------TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhhhhhc--CCCCCCCCCHHHHHHHHHccCC------ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            5789999  7899988776666555543211      12223  3477899999999997 6665   5699988775

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0694|consensus

Probab=97.11  E-value=0.00065  Score=47.41  Aligned_cols=57  Identities=23%  Similarity=0.321  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      +||||+.  |+.||++.+..++...|....        ..-|..++.+..++|.+.+..+|++|--.
T Consensus       557 LlyeML~--Gq~PF~gddEee~FdsI~~d~--------~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  557 LLYEMLV--GESPFPGDDEEEVFDSIVNDE--------VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHhcCC--------CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            4789999  899999999999888887532        34477899999999999999999999765

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.08  E-value=0.00014  Score=44.12  Aligned_cols=27  Identities=19%  Similarity=0.121  Sum_probs=24.0

Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555         41 QPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus        41 ~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      .|..++..+.+++.+|+..+|.+|+++
T Consensus       197 ~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         197 IPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             CcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            456678899999999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0610|consensus

Probab=96.96  E-value=0.001  Score=44.32  Aligned_cols=64  Identities=20%  Similarity=0.309  Sum_probs=48.5

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC----HHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN----FREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps----~~~l~~~   73 (86)
                      +|||+-  |..||.+.+..+....|....      ...+.-+..+....+||.+.+..||.+|-.    +.||..+
T Consensus       325 lYEmLy--G~TPFKG~~~~~Tl~NIv~~~------l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  325 LYEMLY--GTTPFKGSNNKETLRNIVGQP------LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             HHHHHh--CCCCcCCCCchhhHHHHhcCC------CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence            689996  589999998887777665421      112222356789999999999999999998    7787764

>KOG3653|consensus

Probab=96.93  E-value=0.0011  Score=44.74  Aligned_cols=42  Identities=12%  Similarity=0.158  Sum_probs=33.5

Q ss_pred             CCCCCCC-----CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         38 MLPQPIN-----CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        38 ~~~~p~~-----~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      |+..|..     ...-+.+.+..||++|++.|-|+..+.+.+..+..
T Consensus       459 RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  459 RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            4666643     34567889999999999999999999999888643

>KOG0605|consensus

Probab=96.88  E-value=0.0012  Score=45.07  Aligned_cols=63  Identities=21%  Similarity=0.309  Sum_probs=48.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCC---HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPN---FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps---~~~l~~   72 (86)
                      +||||+.  |-+||.+.++.+.+..|.....      -+..|  ..++.+.++||.+|.. ||++|--   +.||..
T Consensus       377 ImyEmLv--GyPPF~s~tp~~T~rkI~nwr~------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  377 IMYEMLV--GYPPFCSETPQETYRKIVNWRE------TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhh------hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            4789999  7899999999999888876332      14444  4567899999999998 9998865   666654

>PHA03209 serine/threonine kinase US3; Provisional

Probab=96.86  E-value=0.0009  Score=43.18  Aligned_cols=29  Identities=21%  Similarity=0.136  Sum_probs=25.2

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++.+...++.+||..||.+|||+.+++.+
T Consensus       323 ~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        323 LPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             CCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence            45566779999999999999999999875

>KOG0661|consensus

Probab=96.83  E-value=0.0018  Score=43.87  Aligned_cols=30  Identities=17%  Similarity=0.137  Sum_probs=27.4

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.+..++|.+|...||.+||++++.+++
T Consensus       262 ~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  262 NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            377899999999999999999999999875

>KOG0690|consensus

Probab=96.74  E-value=0.0015  Score=42.84  Aligned_cols=55  Identities=18%  Similarity=0.266  Sum_probs=46.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP   65 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp   65 (86)
                      +||||+-  |..||.+.+...+...|..+.        ...|...+++...|+...+..+|.+|-
T Consensus       357 VMYEMmC--GRLPFyn~dh~kLFeLIl~ed--------~kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  357 VMYEMMC--GRLPFYNKDHEKLFELILMED--------LKFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             HHHHHHh--ccCcccccchhHHHHHHHhhh--------ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence            4789997  689999998888887776643        466888999999999999999999985

>KOG2052|consensus

Probab=96.66  E-value=0.0043  Score=41.86  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=43.6

Q ss_pred             CCCCCCCC-----HHHHHHHHHhhhhhccccCCCCCCCCC-----cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         11 EQPYEDFS-----DQRVVEHISHFSRSTAKHIMLPQPINC-----PKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        11 ~~P~~~~~-----~~~i~~~v~~~~~~~~~~~~~~~p~~~-----~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +.||.++-     -.++...|+-.      ..|+..|...     -..|..+|+.||..+|..|-++-.|.+.|.++.+
T Consensus       433 ~~Pyyd~Vp~DPs~eeMrkVVCv~------~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  433 QLPYYDVVPSDPSFEEMRKVVCVQ------KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             cCCcccCCCCCCCHHHHhcceeec------ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            58998742     22333333321      2235555432     3468899999999999999999999999998763

>KOG0597|consensus

Probab=96.51  E-value=0.0019  Score=44.98  Aligned_cols=63  Identities=14%  Similarity=0.225  Sum_probs=50.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |++||...+-.+++..|...        ....|+..+.....++..-+..||..|-+-.+++.+
T Consensus       189 ilYE~~~--G~PPF~a~si~~Lv~~I~~d--------~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  189 ILYELYV--GQPPFYARSITQLVKSILKD--------PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHHHhc--CCCCchHHHHHHHHHHHhcC--------CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            3789999  89999877766666666542        134467889999999999999999999999998765

>KOG0593|consensus

Probab=96.49  E-value=0.0099  Score=38.67  Aligned_cols=29  Identities=17%  Similarity=0.371  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.-+.+++..|+..||++|++.++++.+
T Consensus       256 ~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  256 ISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             chHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            34467899999999999999999998753

>KOG0587|consensus

Probab=96.45  E-value=0.0027  Score=45.73  Aligned_cols=64  Identities=22%  Similarity=0.287  Sum_probs=49.2

Q ss_pred             eceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          3 WEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         3 ~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .|+..  |.+|+.++++...++.|-..     .++.+..|...+....++|..|+..+-..||+..+++.+
T Consensus       219 IElad--G~PPl~DmHPmraLF~IpRN-----PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  219 IEMAE--GAPPLCDMHPMRALFLIPRN-----PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             ehhcC--CCCCccCcchhhhhccCCCC-----CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            46666  68999999988777666442     222344466778889999999999999999999998764

>KOG0696|consensus

Probab=96.30  E-value=0.0058  Score=41.34  Aligned_cols=55  Identities=20%  Similarity=0.366  Sum_probs=45.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP   65 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp   65 (86)
                      +||||+.  |++||.+.+..++.+.|.+..        ...|...+.+..++...-+...|.+|-
T Consensus       539 LLyEmla--GQpPFdGeDE~elF~aI~ehn--------vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  539 LLYEMLA--GQPPFDGEDEDELFQAIMEHN--------VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHHcc--------CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            3789998  899999999999988887643        344778899999998888888888874

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=96.29  E-value=0.0043  Score=39.06  Aligned_cols=28  Identities=11%  Similarity=0.018  Sum_probs=24.7

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+|+..||.+|+|+.+++.+
T Consensus       287 ~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         287 DSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             ChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            4567899999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0585|consensus

Probab=96.27  E-value=0.0056  Score=41.71  Aligned_cols=64  Identities=22%  Similarity=0.285  Sum_probs=48.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCC--CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPI--NCPKEIFDLMCECWQKHDSDRPNFREIHLFL   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~--~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l   74 (86)
                      |||-++-  |+.||.+....+....|...        ++.+|.  ....++.+||.+.+..||+.|-+..+|..+.
T Consensus       308 TLYCllf--G~~PF~~~~~~~l~~KIvn~--------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  308 TLYCLLF--GQLPFFDDFELELFDKIVND--------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             hHHHhhh--ccCCcccchHHHHHHHHhcC--------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            3555554  58999988777777777652        134443  3578899999999999999999999997764

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=96.25  E-value=0.0044  Score=38.92  Aligned_cols=28  Identities=11%  Similarity=0.044  Sum_probs=24.7

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+.+++.+|+..||.+|||+.+++.+
T Consensus       287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~h  314 (317)
T cd07867         287 DSKVFLLLQKLLTMDPTKRITSEQALQD  314 (317)
T ss_pred             ChHHHHHHHHHhccCcccccCHHHHhcC
Confidence            4568889999999999999999998763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0032|consensus

Probab=96.16  E-value=0.0089  Score=39.55  Aligned_cols=65  Identities=9%  Similarity=0.015  Sum_probs=48.2

Q ss_pred             eceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          3 WEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         3 ~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |.|+.  |..||.+.+.......|..+...-   ...+. +..+....+++.++...+|.+|.++.+++.+
T Consensus       229 yiLL~--G~~PF~~~~~~~~~~~i~~~~~~f---~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  229 YILLS--GVPPFWGETEFEIFLAILRGDFDF---TSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HHHhh--CCCCCcCCChhHHHHHHHcCCCCC---CCCCc-cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            34444  589999998777777777654310   00111 3568899999999999999999999999885

>KOG0614|consensus

Probab=96.01  E-value=0.0056  Score=42.26  Aligned_cols=57  Identities=18%  Similarity=0.271  Sum_probs=47.7

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN   66 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps   66 (86)
                      ++|+++  |.+||++.++...+..|.+|.-      ...+|...+....++|.+....+|.+|--
T Consensus       609 i~ELL~--G~pPFs~~dpmktYn~ILkGid------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  609 IYELLT--GSPPFSGVDPMKTYNLILKGID------KIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHc--CCCCCCCCchHHHHHHHHhhhh------hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            689999  7999999999888888887653      25678888888899999988999998865

>KOG0604|consensus

Probab=95.90  E-value=0.0049  Score=40.00  Aligned_cols=58  Identities=14%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             CCCCCCCCCH----HHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         10 REQPYEDFSD----QRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        10 ~~~P~~~~~~----~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      |-+||.+.+.    ..+..+|..|+..      .+.|  ++++.+..++++..+..+|.+|-++.+++.+
T Consensus       259 GyPPFYS~hg~aispgMk~rI~~gqy~------FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  259 GYPPFYSNHGLAISPGMKRRIRTGQYE------FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             CCCcccccCCccCChhHHhHhhccCcc------CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            4799987543    3466777777652      3333  3577889999999999999999999999764

>KOG4158|consensus

Probab=95.74  E-value=0.018  Score=38.89  Aligned_cols=66  Identities=15%  Similarity=0.197  Sum_probs=45.3

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      -||||.  +.-||.+.....+-   ...++   +-..+..|+.||..+.+++..-+..||.+|++...-.+.++
T Consensus       447 aYEIfg--~~NPFY~rGem~L~---~r~Yq---e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  447 AYEIFG--RSNPFYKRGEMLLD---TRTYQ---ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             HHHHhc--cCCcccccchheec---hhhhh---hhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            479998  77999873321110   00111   11226668899999999999999999999999876655554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=95.54  E-value=0.013  Score=33.71  Aligned_cols=27  Identities=33%  Similarity=0.418  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.+++..|+..+|.+||+..++++.
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            577889999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0595|consensus

Probab=95.47  E-value=0.013  Score=39.07  Aligned_cols=66  Identities=18%  Similarity=0.311  Sum_probs=50.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |+.||...+..++...+.++..     ..+..+..++..+.+++..-...++.+|-+|.+...+
T Consensus       203 Ilyq~l~--g~~Pf~a~t~~eL~~~~~k~~~-----~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  203 ILYQCLT--GKPPFDAETPKELLLYIKKGNE-----IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             HHHHHHh--CCCCccccCHHHHHHHHhcccc-----ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence            3789999  8999999999888877776543     2244455667777788888888999999888876543

>KOG0611|consensus

Probab=95.24  E-value=0.03  Score=38.00  Aligned_cols=56  Identities=16%  Similarity=0.242  Sum_probs=43.7

Q ss_pred             cCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          8 FAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         8 ~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +| ..||.+.+...++.+|..|..       .  -+..|++..-||.-++-.||+.|.++.+|..+
T Consensus       248 yG-tMPFDG~Dhk~lvrQIs~GaY-------r--EP~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  248 YG-TMPFDGRDHKRLVRQISRGAY-------R--EPETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             hc-ccccCCchHHHHHHHhhcccc-------c--CCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            45 799999988888888887643       1  12345666788888899999999999999775

>KOG0586|consensus

Probab=94.89  E-value=0.023  Score=39.50  Aligned_cols=62  Identities=13%  Similarity=0.125  Sum_probs=46.9

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +|-++.  |..||.+.+......++..|..        -.|-.++.+..+++.+.+..+|.+|++.+++..+
T Consensus       245 ly~LV~--GsLPFDG~~lk~Lr~rvl~gk~--------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  245 LYALVE--GSLPFDGQNLKELRPRVLRGKY--------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             heeeee--cccccCCcccccccchheeeee--------cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            556666  6899998776665555555432        3355677888999999999999999999999764

>KOG1035|consensus

Probab=94.53  E-value=0.039  Score=41.42  Aligned_cols=24  Identities=21%  Similarity=0.117  Sum_probs=21.3

Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         49 IFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        49 l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      -..+|.....+||++|||+.++++
T Consensus       847 e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  847 EASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhh
Confidence            367888889999999999999976

>PHA03210 serine/threonine kinase US3; Provisional

Probab=94.39  E-value=0.046  Score=37.17  Aligned_cols=29  Identities=14%  Similarity=0.067  Sum_probs=25.3

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+++.+|+..||.+||++.+++.+
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            45677788999999999999999999874

>KOG1027|consensus

Probab=94.30  E-value=0.078  Score=38.45  Aligned_cols=65  Identities=18%  Similarity=0.280  Sum_probs=40.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|.+++.| .-||.+.-..+  ..|..|...   ..-+..-..+  +..+||.++...+|..||++.+++.+
T Consensus       703 vfyYvltgG-~HpFGd~~~R~--~NIl~~~~~---L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  703 VFYYVLTGG-SHPFGDSLERQ--ANILTGNYT---LVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             eEEEEecCC-ccCCCchHHhh--hhhhcCccc---eeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            356777766 89997643222  233333321   0011111222  77899999999999999999999753

>KOG0576|consensus

Probab=94.07  E-value=0.11  Score=37.22  Aligned_cols=59  Identities=12%  Similarity=0.124  Sum_probs=42.9

Q ss_pred             CCCCCCCCCHHHHHHHHHh-hhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         10 REQPYEDFSDQRVVEHISH-FSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        10 ~~~P~~~~~~~~i~~~v~~-~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      -++|..+.++.++.+...+ ++.    ++.+.-+......++.+++-|+..+|.+||+...++.
T Consensus       211 Lqpplfdlhpmr~l~LmTkS~~q----pp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  211 LQPPLFDLHPMRALFLMTKSGFQ----PPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             cCCcccccchHHHHHHhhccCCC----CCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            3477778888887777665 222    1222223457788999999999999999999988765

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=93.51  E-value=0.063  Score=37.26  Aligned_cols=26  Identities=8%  Similarity=0.042  Sum_probs=23.5

Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         48 EIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        48 ~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..++|+.+|+..||.+||++.+++.+
T Consensus       425 ~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        425 AGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhCC
Confidence            45689999999999999999999885

>KOG0660|consensus

Probab=93.39  E-value=0.37  Score=31.85  Aligned_cols=31  Identities=16%  Similarity=0.019  Sum_probs=27.7

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.+++...+|+.+++..||.+|.|+.+.+.+
T Consensus       280 p~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  280 PNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            3577888999999999999999999998875

>KOG1187|consensus

Probab=92.59  E-value=0.23  Score=32.69  Aligned_cols=31  Identities=16%  Similarity=0.304  Sum_probs=26.1

Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         49 IFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        49 l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +..+..+|...+|.+||++.+++..|+.+..
T Consensus       324 ~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  324 LAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            5566789999999999999999998866543

>KOG1151|consensus

Probab=90.71  E-value=0.49  Score=32.81  Aligned_cols=61  Identities=15%  Similarity=0.339  Sum_probs=39.2

Q ss_pred             cCCCCCCCCC-CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          8 FAREQPYEDF-SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         8 ~g~~~P~~~~-~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      +| ..||... +...|++.-.-..   ......+.-+.++++..++|.+|++..-++|....++..
T Consensus       679 YG-rKPFGhnqsQQdILqeNTIlk---AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  679 YG-RKPFGHNQSQQDILQENTILK---ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             cc-CCCCCCchhHHHHHhhhchhc---ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            56 7999763 4444543211100   011113333578899999999999999999988887754

>KOG0659|consensus

Probab=89.17  E-value=0.44  Score=30.68  Aligned_cols=30  Identities=10%  Similarity=0.132  Sum_probs=26.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.+..+++...|..||.+|.++++.+++
T Consensus       252 aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  252 AASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             cccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            467788999999999999999999998875

>KOG1167|consensus

Probab=87.50  E-value=0.6  Score=31.48  Aligned_cols=31  Identities=16%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+..+++++.+|+..+|.+|-++++.+++
T Consensus       351 d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  351 DVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             ccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence            4456789999999999999999999998764

>KOG0671|consensus

Probab=87.48  E-value=0.55  Score=31.50  Aligned_cols=26  Identities=23%  Similarity=0.341  Sum_probs=24.0

Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         48 EIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        48 ~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.+|+.+.+..||.+|.++.|.+.+
T Consensus       381 ~LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  381 QLFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             HHHHHHHHHHccCccccccHHHHhcC
Confidence            58899999999999999999999875

>KOG0986|consensus

Probab=86.16  E-value=0.39  Score=33.14  Aligned_cols=57  Identities=14%  Similarity=0.117  Sum_probs=39.4

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~   67 (86)
                      +||||+.  |+.||....    ..+|-.++.+..        -.-|..++.+..++...-+..||.+|--.
T Consensus       375 llYemi~--G~sPFr~~KeKvk~eEvdrr~~~~~--------~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  375 LLYEMIA--GHSPFRQRKEKVKREEVDRRTLEDP--------EEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHHHHHc--ccCchhhhhhhhhHHHHHHHHhcch--------hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            3789998  789997632    234444444321        23357788999999999999999988543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=84.98  E-value=1.1  Score=30.98  Aligned_cols=31  Identities=19%  Similarity=0.210  Sum_probs=26.1

Q ss_pred             CCCcHHHHHHHHHHhccCC---CCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHD---SDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p---~~Rps~~~l~~~   73 (86)
                      ...+...++++.++...++   .+|+|+.+++.|
T Consensus       467 d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        467 DRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             cccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            4567889999999998765   789999999875

>KOG0600|consensus

Probab=82.00  E-value=2.1  Score=29.89  Aligned_cols=28  Identities=14%  Similarity=0.134  Sum_probs=25.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      .++...+|+...+..||.+|.|+.+.+.
T Consensus       372 ~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  372 FPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhc
Confidence            5778899999999999999999998765

>KOG0667|consensus

Probab=81.42  E-value=1.4  Score=31.12  Aligned_cols=27  Identities=15%  Similarity=0.201  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ....+++.+|+..||.+|++..+.+.+
T Consensus       476 ~~F~dflk~~L~~dP~~R~tp~qal~H  502 (586)
T KOG0667|consen  476 KLFIDFLKRCLEWDPAERITPAQALNH  502 (586)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            457899999999999999999998875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-11
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-11
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-11
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		8e-11
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		8e-11
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		8e-11
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-10
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-10
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-10
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-10
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-10
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-10
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-10
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-10
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-10
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-10
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-10
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-10
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-10
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-09
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-09
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-09
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-09
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-09
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		5e-09
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		6e-09
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		6e-09
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		6e-09
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		6e-09
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-09
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-09
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		7e-09
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-09
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		7e-09
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		9e-09
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-08
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-08
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-08
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		4e-08
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		4e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		4e-08
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-08
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		4e-08
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-08
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-08
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-08
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-08
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-07
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-07
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-07
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-07
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-07
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-07
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-07
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		3e-07
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-07
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-07
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-07
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-07
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-07
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-07
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-07
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		4e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-07
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-06
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-06
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-06
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		5e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		6e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		6e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		8e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		9e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		9e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		9e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-05
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-05
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-05
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		1e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-05
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-05
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		3e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-05
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		6e-05
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		7e-05
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		7e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		7e-05
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		7e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		7e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		8e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		8e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		9e-05
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		9e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		9e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		9e-05
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		3e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		3e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-04

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 203 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 254
Query: 62  SDRPNFREI 70
           SDRP F +I
Sbjct: 255 SDRPKFGQI 263

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 209 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 260
Query: 62  SDRPNFREI 70
           SDRP F +I
Sbjct: 261 SDRPKFGQI 269

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 224 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPIALHQLMLDCWQKER 275
Query: 62  SDRPNFREI 70
           SDRP F +I
Sbjct: 276 SDRPKFGQI 284

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 228 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 279
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 280 NNRPKFEQI 288

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 211 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 262
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 263 NNRPKFEQI 271

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 211 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 262
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 263 NNRPKFEQI 271

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D S+Q V++ I    R       LP P++CP  +  LM +CWQK  
Sbjct: 238 MWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPAPMDCPAGLHQLMLDCWQKER 289
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 290 AERPKFEQI 298

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 240 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 291
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 292 NNRPKFEQI 300

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 238 LWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDR 289
Query: 62  SDRPNFREI 70
           ++RP F +I
Sbjct: 290 NNRPKFEQI 298

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++T+  E+PY + S+  V++ I+   R       LP P++CP  I+ LM +CWQ+  
Sbjct: 240 MWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQER 291
Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 292 ARRPKFADI 300

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY + ++Q V++ +    R       LP P++CP  ++ LM +CWQK  
Sbjct: 217 MWEVVSYG-ERPYWEMTNQDVIKAVEEGYR-------LPSPMDCPAALYQLMLDCWQKER 268
Query: 62  SDRPNFREI 70
           + RP F EI
Sbjct: 269 NSRPKFDEI 277

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE++++  E+PY D ++Q V+  I    R       LP P++CP  +  LM +CWQK  
Sbjct: 204 MWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLDCWQKDR 255
Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 256 NHRPKFGQI 264

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+++F  E+PY D S+Q V+  I    R       LP P +CP  +  LM +CWQK  
Sbjct: 211 MWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPTSLHQLMLDCWQKDR 262
Query: 62  SDRPNFREI 70
           + RP F ++
Sbjct: 263 NARPRFPQV 271

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+ ++   QPY  +S+Q VVE I +         +LP P +CP  ++ LM ECW +  
Sbjct: 220 LWEVFSYGL-QPYCGYSNQDVVEMIRNRQ-------VLPCPDDCPAWVYALMIECWNEFP 271
Query: 62  SDRPNFREIH 71
           S RP F++IH
Sbjct: 272 SRRPRFKDIH 281

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+++F  E+PY D S+Q V+  I    R       LP P +CP  +  LM +CWQK  
Sbjct: 213 MWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPTSLHQLMLDCWQKDR 264
Query: 62  SDRPNFREI 70
           + RP F ++
Sbjct: 265 NARPRFPQV 273

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+ ++   QPY  +S+Q VVE I +         +LP P +CP  ++ LM ECW +  
Sbjct: 237 LWEVFSYGL-QPYCGYSNQDVVEMIRNRQ-------VLPCPDDCPAWVYALMIECWNEFP 288
Query: 62  SDRPNFREIH 71
           S RP F++IH
Sbjct: 289 SRRPRFKDIH 298

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+  V+E I+          +L +P  CP+E+++LM  CWQ+  
Sbjct: 220 LWEIFTYGK-QPWYQLSNNEVIECITQGR-------VLQRPRTCPQEVYELMLGCWQREP 271
Query: 62  SDRPNFREIHLFLQ 75
             R N + IH  LQ
Sbjct: 272 HMRKNIKGIHTLLQ 285

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 220 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 271
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 272 KMRPSFLEI 280

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+  V+E I+          +L +P  CPKE++D+M  CWQ+  
Sbjct: 225 LWEIFTYGK-QPWFQLSNTEVIECITQGR-------VLERPRVCPKEVYDVMLGCWQREP 276
Query: 62  SDRPNFREIHLFLQ 75
             R N +EI+  L 
Sbjct: 277 QQRLNIKEIYKILH 290

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 252 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 303
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 304 KMRPSFLEI 312

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 224 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 275
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 276 KMRPSFLEI 284

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 223 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 274
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 275 KMRPSFLEI 283

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 224 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 275
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 276 KMRPSFLEI 284

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 223 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 274
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 275 KMRPSFLEI 283

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 221 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 272
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 273 KMRPSFLEI 281

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 217 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 268
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 269 KMRPSFLEI 277

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 230 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 281
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 282 KMRPSFLEI 290

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI ++   QPY   + + V+ ++   +       +L  P NCP E+++LM  CW K  
Sbjct: 266 LWEIFSYGL-QPYYGMAHEEVIYYVRDGN-------ILACPENCPLELYNLMRLCWSKLP 317
Query: 62  SDRPNFREIHLFLQR 76
           +DRP+F  IH  LQR
Sbjct: 318 ADRPSFCSIHRILQR 332

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  +F+LM  CWQ + 
Sbjct: 230 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 281
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 282 KMRPSFLEI 290

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE++++  E+PY D ++Q V+  I    R       LP P++CP  +  LM +CWQK 
Sbjct: 229 VMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLDCWQKD 280
Query: 61  DSDRPNFREI 70
            + RP F +I
Sbjct: 281 RNHRPKFGQI 290

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 221 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 272
Query: 62  SDRPNFREI 70
             RP F EI
Sbjct: 273 KMRPTFLEI 281

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 223 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 274
Query: 62  SDRPNFREI 70
           + RP F EI
Sbjct: 275 NMRPTFLEI 283

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 222 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 273
Query: 62  SDRPNFREI 70
           + RP F EI
Sbjct: 274 NMRPTFLEI 282

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 222 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 273
Query: 62  SDRPNFREI 70
           + RP F EI
Sbjct: 274 NMRPTFLEI 282

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  + +LM  CWQ + 
Sbjct: 217 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLLELMRMCWQYNP 268
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 269 KMRPSFLEI 277

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 219 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 270
Query: 62  SDRPNFREI 70
             RP F EI
Sbjct: 271 KMRPTFLEI 279

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 222 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 273
Query: 62  SDRPNFREI 70
             RP F EI
Sbjct: 274 KMRPTFLEI 282

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T A EQPY+  S+++V+       R   +  +L +P NCP  + +LM  CWQ + 
Sbjct: 215 LWEIATLA-EQPYQGLSNEQVL-------RFVMEGGLLDKPDNCPDMLLELMRMCWQYNP 266
Query: 62  SDRPNFREI 70
             RP+F EI
Sbjct: 267 KMRPSFLEI 275

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 222 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 273
Query: 62  SDRPNFREI 70
             RP F EI
Sbjct: 274 KMRPTFLEI 282

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI + A EQPY+  S+++V++ +            L QP NCP+ + DLM  CWQ + 
Sbjct: 222 LWEITSLA-EQPYQGLSNEQVLKFVMDGG-------YLDQPDNCPERVTDLMRMCWQFNP 273
Query: 62  SDRPNFREI 70
             RP F EI
Sbjct: 274 KMRPTFLEI 282

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+L +  E+PY + +++ V+  +    R       LP P+ CP  +  LM +CW K  
Sbjct: 244 MWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLDCWHKDR 295
Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 296 AQRPRFSQI 304

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+L +  E+PY + +++ V+  +    R       LP P+ CP  +  LM +CW K  
Sbjct: 244 MWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLDCWHKDR 295
Query: 62  SDRPNFREI 70
           + RP F +I
Sbjct: 296 AQRPRFSQI 304

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 200 LWEIATYGM-SPYPGIDPSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 252 SDRPSFAEIH 261

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 200 LWEIATYGM-SPYPGIDPSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 252 SDRPSFAEIH 261

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 200 LWEIATYGM-SPYPGIDPSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 252 SDRPSFAEIH 261

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 409 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 460
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 461 SDRPSFAEIH 470

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 207 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 259 SDRPSFAEIH 268

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 207 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 259 SDRPSFAEIH 268

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 204 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 256 SDRPSFAEIH 265

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 213 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 265
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 266 PEDRPTFVALRDFL 279

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 213 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 265
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 266 PEDRPTFVALRDFL 279

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 203 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 255 SDRPSFAEIH 264

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 448 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 499
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 500 SDRPSFAEIH 509

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 203 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 255 SDRPSFAEIH 264

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 207 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 259 SDRPSFAEIH 268

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 204 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 256 SDRPSFAEIH 265

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 207 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 259
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 260 PEDRPTFVALRDFL 273

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 206 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 257
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 258 SDRPSFAEIH 267

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 254 SDRPSFAEIH 263

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 204 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 256 SDRPSFAEIH 265

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 215 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 266
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 267 SDRPSFAEIH 276

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 276 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 327
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 328 EDRPNFAII 336

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 203 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 255
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 256 PEDRPTFVALRDFL 269

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 207 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 259
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 260 PEDRPTFVALRDFL 273

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 242 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 293
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 294 EDRPNFAII 302

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 253 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 304
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 305 EDRPNFAII 313

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 203 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 255
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 256 PEDRPTFVALRDFL 269

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 207 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 259 SDRPSFAEIH 268

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 250 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 301
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 302 EDRPNFAII 310

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 252 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 303
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 304 EDRPNFAII 312

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 262 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 313
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 314 EDRPNFAII 322

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 250 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 301
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 302 EDRPNFAII 310

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 236 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 287
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 288 EDRPNFAII 296

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 250 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 301
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 302 EDRPNFAII 310

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I            LP+P +CP++I+++M +CW   
Sbjct: 203 TLWEMFTYGQE-PWIGLNGSQILHKIDKEGER------LPRPEDCPQDIYNVMVQCWAHK 255
Query: 61  DSDRPNFREIHLFL 74
             DRP F  +  FL
Sbjct: 256 PEDRPTFVALRDFL 269

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 236 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 287
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 288 EDRPNFAII 296

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 236 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 287
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 288 EDRPNFAII 296

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ + 
Sbjct: 207 LWEIATYGM-SPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 62  SDRPNFREIH 71
           SDRP+F EIH
Sbjct: 259 SDRPSFAEIH 268

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 457 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 509
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 510 TFEYLQAFLE 519

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 227 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 278
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 279 EDRPNFAII 287

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 235 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 286
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 287 EDRPNFAII 295

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ   
Sbjct: 235 LWEIFSLGY-MPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQP 286
Query: 62  SDRPNFREI 70
            DRPNF  I
Sbjct: 287 EDRPNFAII 295

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   S+  V+       R+  +   +P+P NCP+E++++M  CW+   
Sbjct: 375 LMEIVTYGR-IPYPGMSNPEVI-------RALERGYRMPRPENCPEELYNIMMRCWKNRP 426
Query: 62  SDRPNFREIHLFL 74
            +RP F  I   L
Sbjct: 427 EERPTFEYIQSVL 439

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 426
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 427 TFEYLQAFLE 436

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 426
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 427 TFEYLQAFLE 436

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 426
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 427 TFEYLQAFLE 436

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 201 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 253
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 254 TFEYLQAFLE 263

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 257
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 258 TFEYLQAFLE 267

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 375 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 427
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 428 TFEYLQAFLE 437

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 198 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 250
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 251 TFEYLQAFLE 260

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   S+  V+       R+  +   +P+P NCP+E++++M  CW+   
Sbjct: 359 LMEIVTYGR-IPYPGMSNPEVI-------RALERGYRMPRPENCPEELYNIMMRCWKNRP 410
Query: 62  SDRPNFREIHLFL 74
            +RP F  I   L
Sbjct: 411 EERPTFEYIQSVL 423

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 205 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERP 257
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 258 TFEYLQAFLE 267

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   S+  V+       R+  +   +P+P NCP+E++++M  CW+   
Sbjct: 202 LMEIVTYGR-IPYPGMSNPEVI-------RALERGYRMPRPENCPEELYNIMMRCWKNRP 253
Query: 62  SDRPNFREIHLFL 74
            +RP F  I   L
Sbjct: 254 EERPTFEYIQSVL 266

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 260
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 261 TFEYLQAFLE 270

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 197 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 249
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 250 TFEYLQAFLE 259

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 6   LTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP 65
           LT     PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K   +RP
Sbjct: 199 LTTKGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERP 251
Query: 66  NFREIHLFLQ 75
            F  +  FL+
Sbjct: 252 TFEYLQAFLE 261

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+   ++ I+           L +P  CP E++ +M  CWQ+  
Sbjct: 250 LWEIFTYGK-QPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQREP 301
Query: 62  SDRPNFREIHLFLQ 75
             R + +++H  LQ
Sbjct: 302 QQRHSIKDVHARLQ 315

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+   ++ I+           L +P  CP E++ +M  CWQ+  
Sbjct: 221 LWEIFTYGK-QPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQREP 272
Query: 62  SDRPNFREIHLFLQ 75
             R + +++H  LQ
Sbjct: 273 QQRHSIKDVHARLQ 286

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+ + QP+   S+   ++ I+           L +P  CP E++ +M  CWQ+  
Sbjct: 227 LWEIFTYGK-QPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQREP 278
Query: 62  SDRPNFREIHLFLQ 75
             R + +++H  LQ
Sbjct: 279 QQRHSIKDVHARLQ 292

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++  
Sbjct: 228 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKP 279
Query: 62  SDRPNFREIHLFLQR 76
            +RP+F +I + L R
Sbjct: 280 YERPSFAQILVSLNR 294

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL+F + QP+    ++ V+  +    R       LP+P  CP  ++ LM  CW    
Sbjct: 204 MWEILSFGK-QPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYDP 255
Query: 62  SDRPNFREI 70
           SDRP F E+
Sbjct: 256 SDRPRFTEL 264

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++  
Sbjct: 231 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKP 282
Query: 62  SDRPNFREIHLFLQR 76
            +RP+F +I + L R
Sbjct: 283 YERPSFAQILVSLNR 297

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL+F + QP+    ++ V+  +    R       LP+P  CP  ++ LM  CW    
Sbjct: 216 MWEILSFGK-QPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYDP 267
Query: 62  SDRPNFREI 70
           SDRP F E+
Sbjct: 268 SDRPRFTEL 276

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++  
Sbjct: 221 LWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKP 272
Query: 62  SDRPNFREIHLFLQR 76
            +RP+F +I + L R
Sbjct: 273 YERPSFAQILVSLNR 287

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL+F + QP+    ++ V+  +    R       LP+P  CP  ++ LM  CW    
Sbjct: 200 MWEILSFGK-QPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYDP 251
Query: 62  SDRPNFREI 70
           SDRP F E+
Sbjct: 252 SDRPRFTEL 260

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 224 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 280
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 281 MIMTECWNNNVNQRPSFRDLAL 302

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 224 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 280
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 281 MIMTECWNNNVNQRPSFRDLAL 302

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 237 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 293
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 294 MIMTECWNNNVNQRPSFRDLAL 315

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 262
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 263 MIMTECWNNNVNQRPSFRDLAL 284

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 207 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 263
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 264 MIMTECWNNNVNQRPSFRDLAL 285

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 213 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 269
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 270 MIMTECWNNNVNQRPSFRDLAL 291

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 262
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 263 MIMTECWNNNVNQRPSFRDLAL 284

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 212 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 268
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 269 MIMTECWNNNVNQRPSFRDLAL 290

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 262
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 263 MIMTECWNNNVNQRPSFRDLAL 284

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 211 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 267
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 268 MIMTECWNNNVNQRPSFRDLAL 289

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 209 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 265
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 266 MIMTECWNNNVNQRPSFRDLAL 287

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 204 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 260
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 261 MIMTECWNNNVNQRPSFRDLAL 282

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 210 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 266
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 267 MIMTECWNNNVNQRPSFRDLAL 288

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 209 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 265
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 266 MIMTECWNNNVNQRPSFRDLAL 287

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 205 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 261
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 262 MIMTECWNNNVNQRPSFRDLAL 283

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 1   TLWEILTF---AREQPYE-------DFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIF 50
            L+E+ T+   ++  P E       D   Q +V H+    ++  +   LP+P  CP EI+
Sbjct: 209 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR---LPRPDGCPDEIY 265
Query: 51  DLMCECWQKHDSDRPNFREIHL 72
            +M ECW  + + RP+FR++ L
Sbjct: 266 MIMTECWNNNVNQRPSFRDLAL 287

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE  +     PY + S+Q+  E +    R       LP P  CP  +F LM +CW    
Sbjct: 305 LWETFSLG-ASPYPNLSNQQTREFVEKGGR-------LPCPELCPDAVFRLMEQCWAYEP 356
Query: 62  SDRPNFREIHLFLQ 75
             RP+F  I+  LQ
Sbjct: 357 GQRPSFSTIYQELQ 370

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE  +     PY + S+Q+  E +    R       LP P  CP  +F LM +CW    
Sbjct: 305 LWETFSLG-ASPYPNLSNQQTREFVEKGGR-------LPCPELCPDAVFRLMEQCWAYEP 356
Query: 62  SDRPNFREIHLFLQ 75
             RP+F  I+  LQ
Sbjct: 357 GQRPSFSTIYQELQ 370

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V + +    R       + QP  CP ++++LM  CW+   
Sbjct: 221 LWEIATYGM-SPYPGIDLSQVYDLLEKGYR-------MEQPEGCPPKVYELMRACWKWSP 272
Query: 62  SDRPNFREIH 71
           +DRP+F E H
Sbjct: 273 ADRPSFAETH 282

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 230 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 281
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 282 SRRPRFTEL 290

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 207 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 258
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 259 SRRPRFTEL 267

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 202 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 253
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 254 SRRPRFTEL 262

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 205 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 256
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 257 SRRPRFTEL 265

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 202 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 253
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 254 SRRPRFTEL 262

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 202 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 253
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 254 SRRPRFTEL 262

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI T     PY    +  + +++ H  R       L QP +C  E++++M  CW+  
Sbjct: 238 TMWEIATRGM-TPYPGVQNHEMYDYLLHGHR-------LKQPEDCLDELYEIMYSCWRTD 289
Query: 61  DSDRPNFREIHLFLQR 76
             DRP F  + L L++
Sbjct: 290 PLDRPTFSVLRLQLEK 305

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 204 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 255
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 256 SRRPRFTEL 264

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 202 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 253
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 254 SRRPRFTEL 262

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 582 MWEILMHGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 633
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 634 SRRPRFTEL 642

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 199 MWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 250
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 251 SRRPRFTEL 259

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW    
Sbjct: 582 MWEILMHGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDP 633
Query: 62  SDRPNFREI 70
           S RP F E+
Sbjct: 634 SRRPRFTEL 642

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 215 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 267 ADSRPKFRE--LIIEFSKMARDPQ 288

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI+T   + PY    +  +  ++   +R       L QP  C +E++DLM +CW   
Sbjct: 228 TMWEIMTRG-QTPYAGIENAEIYNYLIGGNR-------LKQPPECMEEVYDLMYQCWSAD 279
Query: 61  DSDRPNFREIHLFLQ 75
              RP+F  + + L+
Sbjct: 280 PKQRPSFTCLRMELE 294

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L E++T  R  PY   +++ V+E +    R       +P P +CP  + +LM  CW+K  
Sbjct: 196 LTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMIHCWKKDP 247
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  +  FL+
Sbjct: 248 EERPTFEYLQSFLE 261

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+    + + + +    R       LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-AKPYDGIPAREIPDLLEKGER-------LPQPPICTIDVYMIMVKCWMID 261
Query: 61  DSDRPNFREI 70
              RP FRE+
Sbjct: 262 SECRPRFREL 271

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 215 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 267 ADSRPKFRE--LIIEFSKMARDPQ 288

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 215 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 267 ADSRPKFRE--LIIEFSKMARDPQ 288

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 215 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 267 ADSRPKFRE--LIIEFSKMARDPQ 288

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 205 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 256
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 257 ADSRPKFRE--LIIEFSKMARDPQ 278

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 211 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 263 ADSRPKFRE--LIIEFSKMARDPQ 284

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 262 ADSRPKFRE--LIIEFSKMARDPQ 283

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 211 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 263 ADSRPKFRE--LIIEFSKMARDPQ 284

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 211 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 263 ADSRPKFRE--LIIEFSKMARDPQ 284

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 262 ADSRPKFRE--LIIEFSKMARDPQ 283

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 214 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 265
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 266 ADSRPKFRE--LIIEFSKMARDPQ 287

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 202 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 253
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 254 ADSRPKFRE--LIIEFSKMARDPQ 275

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 262 ADSRPKFRE--LIIEFSKMARDPQ 283

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 212 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 263
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 264 ADSRPKFRE--LIIEFSKMARDPQ 285

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 209 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 260
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 261 ADSRPKFRE--LIIEFSKMARDPQ 282

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 233 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 284
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 285 ADSRPKFRE--LIIEFSKMARDPQ 306

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 209 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 260
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 261 ADSRPKFRE--LIIEFSKMARDPQ 282

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 212 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 263
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 264 ADSRPKFRE--LIIEFSKMARDPQ 285

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 242 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 293
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 294 ADSRPKFRE--LIIEFSKMARDPQ 315

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+EI+T+ +  PY   ++  V+  +S   R       +P+  NCP E++D+M  CW++  
Sbjct: 200 LYEIVTYGK-IPYPGRTNADVMSALSQGYR-------MPRMENCPDELYDIMKMCWKEKA 251
Query: 62  SDRPNF 67
            +RP F
Sbjct: 252 EERPTF 257

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 259
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 260 ADSRPKFRE--LIIEFSKMARDPQ 281

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 211 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 262
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 263 ADSRPKFRE--LIIEFSKMARDPQ 284

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 196 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 247
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 248 EDRPTFDYLRSVLE 261

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 261
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 262 ADSRPKFRE--LIIEFSKMARDPQ 283

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 210 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 261
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 262 ADSRPKFRE--LIIEFSKMARDPQ 283

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 195 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 246
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 247 EDRPTFDYLRSVLE 260

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+           S  S    K   LPQP  C  +++ +M +CW   
Sbjct: 218 TVWELMTFG-SKPYDGIP-------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 269
Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE  L ++   +  +P+
Sbjct: 270 ADSRPKFRE--LIIEFSKMARDPQ 291

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+EI+T+ +  PY   ++  V+  +S   R       +P+  NCP E++D+M  CW++  
Sbjct: 201 LYEIVTYGK-IPYPGRTNADVMTALSQGYR-------MPRVENCPDELYDIMKMCWKEKA 252
Query: 62  SDRPNF 67
            +RP F
Sbjct: 253 EERPTF 258

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE L++  ++PY+      V+  I    R       +  P  CP E++ LM +CW   
Sbjct: 202 TMWEALSYG-QKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 253
Query: 61  DSDRPNF 67
             DRP+F
Sbjct: 254 WEDRPDF 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 252 EDRPTFDYLRSVLE 265

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 252 EDRPTFDYLRSVLE 265

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 252 EDRPTFDYLRSVLE 265

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+    + + + +    R       LPQP  C  +++ +M +CW   
Sbjct: 231 TIWELMTFG-GKPYDGIPTREIPDLLEKGER-------LPQPPICTIDVYMVMVKCWMID 282
Query: 61  DSDRPNFREI 70
              RP F+E+
Sbjct: 283 ADSRPKFKEL 292

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 201 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 252
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 253 EDRPTFDYLRSVLE 266

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 1   TLWEILTF--AREQPYEDFSD-------QRVVEHISHFSRSTAKHIMLPQPINCPKEIFD 51
           TL+E+LT+  + + P+  F++       Q  V  ++       +   LP+P  CP EI+ 
Sbjct: 204 TLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER---LPRPDRCPCEIYH 260
Query: 52  LMCECWQKHDSDRPNFREIHLFLQRKNLGY 81
           LM  CW+   S RP F+ +   LQ     Y
Sbjct: 261 LMKNCWETEASFRPTFQNLVPILQTAQEKY 290

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 202 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 253
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 254 EDRPTFDYLRSVLE 267

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 1   TLWEILTF--AREQPYEDFSD-------QRVVEHISHFSRSTAKHIMLPQPINCPKEIFD 51
           TL+E+LT+  + + P+  F++       Q  V  ++       +   LP+P  CP EI+ 
Sbjct: 203 TLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER---LPRPDRCPCEIYH 259
Query: 52  LMCECWQKHDSDRPNFREIHLFLQRKNLGY 81
           LM  CW+   S RP F+ +   LQ     Y
Sbjct: 260 LMKNCWETEASFRPTFQNLVPILQTAQEKY 289

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 205 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 256
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 257 EDRPTFDYLRSVLE 270

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+    + + + +    R       LPQP  C  +++ +M +CW   
Sbjct: 208 TIWELMTFG-GKPYDGIPTREIPDLLEKGER-------LPQPPICTIDVYMVMVKCWMID 259
Query: 61  DSDRPNFREI 70
              RP F+E+
Sbjct: 260 ADSRPKFKEL 269

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 211 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 262
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 263 DERPTFK 269

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 202 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 253
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 254 DERPTFK 260

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 211 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 262
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 263 DERPTFK 269

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE L++  ++PY+      V+  I    R       +  P  CP E++ LM +CW   
Sbjct: 528 TMWEALSYG-QKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 579
Query: 61  DSDRPNF 67
             DRP+F
Sbjct: 580 WEDRPDF 586

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 208 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 259
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 260 EDRPTFDYLRSVLE 273

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 206 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 257
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 258 EDRPTFDYLRSVLE 271

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 210 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 261
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 262 EDRPTFDYLRSVLE 275

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 252 EDRPTFDYLRSVLE 265

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 206 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 257
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 258 EDRPTFDYLRSVLE 271

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI+T     PY     +R+      F+     H M  +P NC +E++ LM +CW++  
Sbjct: 242 LWEIVTLG-GNPYPGIPPERL------FNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEP 293
Query: 62  SDRPNFREIHLFLQR 76
             RP F +I   L++
Sbjct: 294 DKRPVFADISKDLEK 308

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 196 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 247
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 248 DERPTFK 254

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 196 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 247
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 248 DERPTFK 254

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI+T     PY     +R+      F+     H M  +P NC +E++ LM +CW++  
Sbjct: 242 LWEIVTLG-GNPYPGIPPERL------FNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEP 293
Query: 62  SDRPNFREIHLFLQR 76
             RP F +I   L++
Sbjct: 294 DKRPVFADISKDLEK 308

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI+T     PY     +R+      F+     H M  +P NC +E++ LM +CW++  
Sbjct: 242 LWEIVTLG-GNPYPGIPPERL------FNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEP 293
Query: 62  SDRPNFREIHLFLQR 76
             RP F +I   L++
Sbjct: 294 DKRPVFADISKDLEK 308

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 209 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 260
Query: 62  SDRPNFREIHLFLQ 75
            DRP F  +   L+
Sbjct: 261 EDRPTFDYLRSVLE 274

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 195 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 246
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 247 DERPTFK 253

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI       A+ + L +P    ++++ +M  CW +  
Sbjct: 191 MWEIYSLGK-MPYERFTNSETAEHI-------AQGLRLYRPHLASEKVYTIMYSCWHEKA 242
Query: 62  SDRPNFR 68
            +RP F+
Sbjct: 243 DERPTFK 249

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 198 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 249
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 250 ENRPGFAAVELRLR 263

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 204 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 255
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 256 ENRPGFAAVELRLR 269

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 204 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 255
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 256 ENRPGFAAVELRLR 269

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 200 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 251
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 252 ENRPGFAAVELRLR 265

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 210 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 261
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 262 ENRPGFAAVELRLR 275

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF  E PY       V + +    R       L QP  C  +++ +M +CW   
Sbjct: 206 TVWELMTFGAE-PYAGLRLAEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMID 257
Query: 61  DSDRPNFREI 70
           ++ RP F+E+
Sbjct: 258 ENIRPTFKEL 267

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F R  PY     + VV  +        K   +  P  CP  ++D+M  CW    
Sbjct: 376 LWEIYSFGR-VPYPRIPLKDVVPRVE-------KGYKMDAPDGCPPAVYDVMKNCWHLDA 427
Query: 62  SDRPNFREI 70
           + RP F ++
Sbjct: 428 ATRPTFLQL 436

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRS--TAKHIMLPQPINCPKEIFDLMCECWQK 59
           LWE+LT     PY          HI  F  +   A+   LPQP  CP  ++ +M +CW+ 
Sbjct: 218 LWELLTRG-APPYR---------HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEA 267
Query: 60  HDSDRPNFR 68
             + RP FR
Sbjct: 268 DPAVRPTFR 276

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 563 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 614
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 615 ENRPGFAAVELRLR 628

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 250 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 302
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 303 THRPTFQQICSFLQEQ 318

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 218 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 269
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 270 ENRPGFAAVELRLR 283

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 562 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 613
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 614 ENRPGFAAVELRLR 627

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 220 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 271
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 272 ENRPGFAAVELRLR 285

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW    
Sbjct: 220 MWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDV 271
Query: 62  SDRPNFREIHLFLQ 75
            +RP F  + L L+
Sbjct: 272 ENRPGFAAVELRLR 285

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 256 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 308
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 309 THRPTFQQICSFLQEQ 324

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF  E PY       V + +    R       L QP  C  +++ +M +CW   
Sbjct: 224 TVWELMTFGAE-PYAGLRLAEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMID 275
Query: 61  DSDRPNFREI 70
           ++ RP F+E+
Sbjct: 276 ENIRPTFKEL 285

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 256 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 308
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 309 THRPTFQQICSFLQEQ 324

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 244 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 296
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 297 THRPTFQQICSFLQEQ 312

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 252 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 304
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 305 THRPTFQQICSFLQEQ 320

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +     PY            S F +       + QP   PK I+ +M  CW    
Sbjct: 258 LWEIFSLGL-NPYPGILVN------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 310
Query: 62  SDRPNFREIHLFLQRK 77
           + RP F++I  FLQ +
Sbjct: 311 THRPTFQQICSFLQEQ 326

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 39  LPQPINCPKEIFDLMCECWQKHDSDRPNFREI 70
           LP+P  CP E++ LM  CW+   S RP F  +
Sbjct: 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE+ S+  VVE IS   R       L +P      ++ +M  CW++  
Sbjct: 194 MWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWKERP 245
Query: 62  SDRPNFREI 70
            DRP F  +
Sbjct: 246 EDRPAFSRL 254

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE+ S+  VVE IS   R       L +P      ++ +M  CW++  
Sbjct: 214 MWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWKERP 265
Query: 62  SDRPNFREI 70
            DRP F  +
Sbjct: 266 EDRPAFSRL 274

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++T     PY D +   +  ++    R       L QP  CP  ++++M +CW    
Sbjct: 286 LWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPKA 337
Query: 62  SDRPNFREI 70
             RP+F E+
Sbjct: 338 EMRPSFSEL 346

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE+ S+  VVE IS   R       L +P      ++ +M  CW++  
Sbjct: 194 MWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWKERP 245
Query: 62  SDRPNFREI 70
            DRP F  +
Sbjct: 246 EDRPAFSRL 254

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-24
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-24
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-24
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-23
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-22
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-21
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-21
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-21
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-21
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-21
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-21
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	9e-21
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-20
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-20
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-20
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-20
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-20
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-20
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-20
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-20
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-20
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-20
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-20
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-20
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-20
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	5e-20
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-20
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-20
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-20
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	7e-20
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-20
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-19
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-19
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-19
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-19
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-19
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-19
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-19
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-19
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-19
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-18
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-18
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-18
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-18
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-18
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-18
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-18
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-15
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-13
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-04

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 92.7 bits (231), Expect = 1e-24
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T+  +QP+   S+   ++ I+           L +P  CP E++ +M  CWQ+ 
Sbjct: 249 VLWEIFTYG-KQPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQRE 300

Query: 61  DSDRPNFREIHLFLQR 76
              R + +++H  LQ 
Sbjct: 301 PQQRHSIKDVHARLQA 316

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 91.5 bits (228), Expect = 3e-24
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T+ + QP+   S+  V+E I+           L +P  CPKE++D+M  CWQ+ 
Sbjct: 224 ILWEIFTYGK-QPWFQLSNTEVIECITQGRV-------LERPRVCPKEVYDVMLGCWQRE 275

Query: 61  DSDRPNFREIHLFLQR 76
              R N +EI+  L  
Sbjct: 276 PQQRLNIKEIYKILHA 291

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 90.7 bits (226), Expect = 5e-24
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE+ ++   QPY  +S+Q VVE I +          LP P +CP  ++ LM ECW + 
Sbjct: 219 VLWEVFSYG-LQPYCGYSNQDVVEMIRNRQV-------LPCPDDCPAWVYALMIECWNEF 270

Query: 61  DSDRPNFREIHLFLQ 75
            S RP F++IH  L+
Sbjct: 271 PSRRPRFKDIHSRLR 285

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 89.7 bits (223), Expect = 2e-23
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI ++   QPY   + + V+ ++   +        L  P NCP E+++LM  CW K 
Sbjct: 265 VLWEIFSYG-LQPYYGMAHEEVIYYVRDGNI-------LACPENCPLELYNLMRLCWSKL 316

Query: 61  DSDRPNFREIHLFLQR 76
            +DRP+F  IH  LQR
Sbjct: 317 PADRPSFCSIHRILQR 332

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 85.8 bits (213), Expect = 4e-22
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T A EQPY+  S+++V+  +            L +P NCP  +F+LM  CWQ +
Sbjct: 229 VLWEIATLA-EQPYQGLSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYN 280

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F EI   ++ 
Sbjct: 281 PKMRPSFLEIISSIKE 296

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 83.1 bits (206), Expect = 3e-21
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW   
Sbjct: 206 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYD 257

Query: 61  DSDRPNFREIHLFLQR 76
            S RP F E+   L  
Sbjct: 258 PSRRPRFTELKAQLST 273

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 83.5 bits (207), Expect = 3e-21
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI T     PY    +  + +++ H  R       L QP +C  E++++M  CW+  
Sbjct: 238 TMWEIATRGM-TPYPGVQNHEMYDYLLHGHR-------LKQPEDCLDELYEIMYSCWRTD 289

Query: 61  DSDRPNFREIHLFLQR 76
             DRP F  + L L++
Sbjct: 290 PLDRPTFSVLRLQLEK 305

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 83.5 bits (207), Expect = 4e-21
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ  
Sbjct: 234 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQ 285

Query: 61  DSDRPNFREIHLFLQR 76
             DRPNF  I   ++ 
Sbjct: 286 PEDRPNFAIILERIEY 301

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 82.6 bits (205), Expect = 4e-21
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WEIL+F  +QP+    ++ V+  +    R       LP+P  CP  ++ LM  CW   
Sbjct: 203 CMWEILSFG-KQPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYD 254

Query: 61  DSDRPNFREIHLFLQR 76
            SDRP F E+   L  
Sbjct: 255 PSDRPRFTELVCSLSD 270

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 82.3 bits (204), Expect = 7e-21
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE++T     PY D +   +  ++    R       L QP  CP  ++++M +CW   
Sbjct: 221 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPK 272

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F E+   +  
Sbjct: 273 AEMRPSFSELVSRISA 288

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 82.8 bits (205), Expect = 8e-21
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE++T+  E+PY + S+  V++ I+   R       LP P++CP  I+ LM +CWQ+ 
Sbjct: 239 VMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQE 290

Query: 61  DSDRPNFREIHLFLQR 76
            + RP F +I   L +
Sbjct: 291 RARRPKFADIVSILDK 306

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 81.5 bits (202), Expect = 9e-21
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PYE+ S+  VVE IS   R       L +P      ++ +M  CW++  
Sbjct: 195 MWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWRERP 246

Query: 62  SDRPNFREIHLFLQR 76
            DRP F  +   L  
Sbjct: 247 EDRPAFSRLLRQLAE 261

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 81.9 bits (203), Expect = 9e-21
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI +  +  PYE F++    EHI+   R       L +P    ++++ +M  CW +  
Sbjct: 211 MWEIYSLGK-MPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIMYSCWHEKA 262

Query: 62  SDRPNFREIHLFLQR 76
            +RP F+ +   +  
Sbjct: 263 DERPTFKILLSNILD 277

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 82.8 bits (205), Expect = 1e-20
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI +     PY   S+Q V+E ++   R       +  P NCP  ++ +M +CWQ  
Sbjct: 275 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQ 326

Query: 61  DSDRPNFREIHLFLQR 76
             DRPNF  I   ++ 
Sbjct: 327 PEDRPNFAIILERIEY 342

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 81.9 bits (203), Expect = 1e-20
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 10/84 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+      +   +    R       LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMRKCWMID 259

Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
              RP FRE+ +   +  +  +P+
Sbjct: 260 ADSRPKFRELIIEFSK--MARDPQ 281

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 82.0 bits (203), Expect = 1e-20
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE+L +   +PY + +++ V+  +    R       LP P+ CP  +  LM +CW K 
Sbjct: 243 VMWEVLAYGE-RPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLDCWHKD 294

Query: 61  DSDRPNFREIHLFLQRKNLGYNPET 85
            + RP F +I   L    L  +PE+
Sbjct: 295 RAQRPRFSQIVSVLD--ALIRSPES 317

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 81.6 bits (202), Expect = 2e-20
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WEI+T  +  PY    +  +  ++   +R       L QP  C +E++DLM +CW   
Sbjct: 228 TMWEIMTRGQ-TPYAGIENAEIYNYLIGGNR-------LKQPPECMEEVYDLMYQCWSAD 279

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F  + + L+ 
Sbjct: 280 PKQRPSFTCLRMELEN 295

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 80.7 bits (200), Expect = 2e-20
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WE+ +  +  PY+ +++  VV  +S   R       L +P      I+ +M  CW +  
Sbjct: 195 MWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYSCWHELP 246

Query: 62  SDRPNFREIHLFLQ 75
             RP F+++   ++
Sbjct: 247 EKRPTFQQLLSSIE 260

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 81.1 bits (201), Expect = 2e-20
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE L++ + +PY+      V+  I    R       +  P  CP E++ LM +CW   
Sbjct: 202 TMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 253

Query: 61  DSDRPNFREIHLFLQR 76
             DRP+F  +   ++ 
Sbjct: 254 WEDRPDFLTVEQRMRA 269

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 82.0 bits (203), Expect = 2e-20
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE++++  E+PY + S+Q V++ +    R       LP P++CP  ++ LM +CWQK 
Sbjct: 239 VLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKD 290

Query: 61  DSDRPNFREIHLFLQR 76
            ++RP F +I   L +
Sbjct: 291 RNNRPKFEQIVSILDK 306

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 80.7 bits (200), Expect = 2e-20
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +    R       + +P  CP+++++LM  CWQ + 
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNP 253

Query: 62  SDRPNFREIHLFLQR 76
           SDRP+F EIH   + 
Sbjct: 254 SDRPSFAEIHQAFET 268

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 80.7 bits (200), Expect = 3e-20
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++  
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251

Query: 62  SDRPNFREIHLFLQR 76
            DRP F  +   L+ 
Sbjct: 252 EDRPTFDYLRSVLED 266

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 80.7 bits (200), Expect = 3e-20
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F R  PY     + VV  +    +       +  P  CP  ++++M  CW    
Sbjct: 204 LWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYEVMKNCWHLDA 255

Query: 62  SDRPNFREIHLFLQR 76
           + RP+F ++   L+ 
Sbjct: 256 AMRPSFLQLREQLEH 270

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 81.3 bits (201), Expect = 3e-20
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE++T     PY D +   +  ++    R       L QP  CP  ++++M +CW   
Sbjct: 285 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPK 336

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F E+   +  
Sbjct: 337 AEMRPSFSELVSRISA 352

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 81.3 bits (201), Expect = 3e-20
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI T     PY     + + + +    R       + +P NC  E++ +M +CW    
Sbjct: 295 MWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVP 346

Query: 62  SDRPNFREIHLFLQR 76
           S RP F+++   L R
Sbjct: 347 SQRPTFKQLVEDLDR 361

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 80.8 bits (200), Expect = 4e-20
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++ 
Sbjct: 230 LLWEIVSLGG-TPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREK 281

Query: 61  DSDRPNFREIHLFLQR 76
             +RP+F +I + L R
Sbjct: 282 PYERPSFAQILVSLNR 297

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 80.0 bits (198), Expect = 5e-20
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE  ++ + +PY       V   +    R       +  P  CP+E++DLM  CW   
Sbjct: 209 LMWEAFSYGQ-KPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYD 260

Query: 61  DSDRPNFREIHLFLQR 76
             +RP F  + L L+ 
Sbjct: 261 VENRPGFAAVELRLRN 276

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 80.0 bits (198), Expect = 6e-20
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE+LT     PY       +   ++   R       LPQP  CP  ++ +M +CW+  
Sbjct: 217 LLWELLTRGA-PPYRHIDPFDLTHFLAQGRR-------LPQPEYCPDSLYQVMQQCWEAD 268

Query: 61  DSDRPNFREIHLFLQR 76
            + RP FR +   +++
Sbjct: 269 PAVRPTFRVLVGEVEQ 284

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 80.9 bits (200), Expect = 6e-20
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI +F R  PY     + VV  +    +       +  P  CP  ++D+M  CW    
Sbjct: 376 LWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYDVMKNCWHLDA 427

Query: 62  SDRPNFREIHLFLQR 76
           + RP F ++   L+ 
Sbjct: 428 ATRPTFLQLREQLEH 442

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 80.0 bits (198), Expect = 7e-20
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI+T     PY     +R+   +    R       + +P NC +E++ LM +CW++ 
Sbjct: 241 LLWEIVTLGG-NPYPGIPPERLFNLLKTGHR-------MERPDNCSEEMYRLMLQCWKQE 292

Query: 61  DSDRPNFREIHLFLQR 76
              RP F +I   L++
Sbjct: 293 PDKRPVFADISKDLEK 308

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 80.0 bits (198), Expect = 7e-20
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           +WEI T     PY     + + + +    R       + +P NC  E++ +M +CW    
Sbjct: 249 MWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVP 300

Query: 62  SDRPNFREIHLFLQR 76
           S RP F+++   L R
Sbjct: 301 SQRPTFKQLVEDLDR 315

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 81.1 bits (200), Expect = 7e-20
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW   
Sbjct: 581 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYD 632

Query: 61  DSDRPNFREIHLFLQR 76
            S RP F E+   L  
Sbjct: 633 PSRRPRFTELKAQLST 648

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 80.5 bits (199), Expect = 1e-19
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+T+ R  PY   S+  V+  +    R       +P+P NCP+E++++M  CW+   
Sbjct: 375 LMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKNRP 426

Query: 62  SDRPNFREIHLFLQR 76
            +RP F  I   L  
Sbjct: 427 EERPTFEYIQSVLDD 441

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 79.3 bits (196), Expect = 2e-19
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T     PY     + + + +    R       + +P NC  E++ +M +CW    
Sbjct: 283 LWEIFTLGG-SPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVP 334

Query: 62  SDRPNFREIHLFLQR 76
           S RP F+++   L R
Sbjct: 335 SQRPTFKQLVEDLDR 349

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 78.1 bits (193), Expect = 3e-19
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY       V + +    R       L QP  C  +++ +M +CW   
Sbjct: 206 TVWELMTFGA-EPYAGLRLAEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMID 257

Query: 61  DSDRPNFREIHLFLQR 76
           ++ RP F+E+     R
Sbjct: 258 ENIRPTFKELANEFTR 273

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 78.5 bits (194), Expect = 4e-19
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE  +     PY + S+Q+  E +    R       LP P  CP  +F LM +CW   
Sbjct: 304 LLWETFSLGA-SPYPNLSNQQTREFVEKGGR-------LPCPELCPDAVFRLMEQCWAYE 355

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F  I+  LQ 
Sbjct: 356 PGQRPSFSTIYQELQS 371

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 78.7 bits (194), Expect = 5e-19
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWEI T+    PY      +V E +    R       + +P  CP+++++LM  CWQ + 
Sbjct: 409 LWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNP 460

Query: 62  SDRPNFREIHLFLQR 76
           SDRP+F EIH   + 
Sbjct: 461 SDRPSFAEIHQAFET 475

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 77.4 bits (191), Expect = 6e-19
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+      +   +    R       LPQP  C  +++ +M +CW   
Sbjct: 208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMID 259

Query: 61  DSDRPNFREIHLFLQR 76
              RP FRE+ +   +
Sbjct: 260 ADSRPKFRELIIEFSK 275

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 77.9 bits (192), Expect = 7e-19
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L E+ T  R  PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K  
Sbjct: 371 LTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEP 422

Query: 62  SDRPNFREIHLFLQR 76
            +RP F  +  FL+ 
Sbjct: 423 EERPTFEYLQAFLED 437

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 76.9 bits (190), Expect = 8e-19
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHF-SRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
           TLWE+ T+ + +P+   +  +++  I     R       LP+P +CP++I+++M +CW  
Sbjct: 213 TLWEMFTYGQ-EPWIGLNGSQILHKIDKEGER-------LPRPEDCPQDIYNVMVQCWAH 264

Query: 60  HDSDRPNFREIHLFLQR 76
              DRP F  +  FL  
Sbjct: 265 KPEDRPTFVALRDFLLE 281

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 78.0 bits (192), Expect = 8e-19
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L E+ T  R  PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K  
Sbjct: 454 LTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEP 505

Query: 62  SDRPNFREIHLFLQR 76
            +RP F  +  FL+ 
Sbjct: 506 EERPTFEYLQAFLED 520

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 77.3 bits (190), Expect = 1e-18
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE L++ + +PY+      V+  I    R       +  P  CP E++ LM +CW   
Sbjct: 528 TMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 579

Query: 61  DSDRPNFREIHLFLQR 76
             DRP+F  +   ++ 
Sbjct: 580 WEDRPDFLTVEQRMRA 595

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 75.8 bits (187), Expect = 2e-18
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 10/76 (13%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWEI +    +P      QR ++      +       LP P      + +L+  C    
Sbjct: 207 TLWEICSGGD-KPLSALDSQRKLQFYEDRHQ-------LPAPKAAE--LANLINNCMDYE 256

Query: 61  DSDRPNFREIHLFLQR 76
              RP+FR I   L  
Sbjct: 257 PDHRPSFRAIIRDLNS 272

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 75.4 bits (186), Expect = 3e-18
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 21/90 (23%)

Query: 1   TLWEILTFARE--------------QPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCP 46
            L+E+ T+  +                        ++E + +  R       LP+P  CP
Sbjct: 206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-------LPRPDGCP 258

Query: 47  KEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
            EI+ +M ECW  + + RP+FR++ L + +
Sbjct: 259 DEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 75.7 bits (187), Expect = 3e-18
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 2   LWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           LWE+ +     PY     D +  + I    R       +  P + P E++D+M  CW   
Sbjct: 237 LWELFSLGS-SPYPGMPVDSKFYKMIKEGFR-------MLSPEHAPAEMYDIMKTCWDAD 288

Query: 61  DSDRPNFREIHLFLQR 76
              RP F++I   +++
Sbjct: 289 PLKRPTFKQIVQLIEK 304

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 75.4 bits (186), Expect = 3e-18
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 20/89 (22%)

Query: 1   TLWEILTFAREQ-------------PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPK 47
           TL E+LT+                  +   +  R+V  +    R       LP P NCP 
Sbjct: 218 TLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR-------LPCPPNCPD 270

Query: 48  EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
           E++ LM +CW+   S+R +F+ +    + 
Sbjct: 271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 75.5 bits (186), Expect = 3e-18
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 21/90 (23%)

Query: 1   TLWEILTFARE--------------QPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCP 46
            L+E+ T+  +                        ++E + +  R       LP+P  CP
Sbjct: 237 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-------LPRPDGCP 289

Query: 47  KEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
            EI+ +M ECW  + + RP+FR++ L + +
Sbjct: 290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 74.6 bits (184), Expect = 8e-18
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 9/77 (11%)

Query: 1   TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
            LWEI +     PY     D+     +   +R       +  P     E++  M +CW  
Sbjct: 239 LLWEIFSLGA-SPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHG 290

Query: 60  HDSDRPNFREIHLFLQR 76
             S RP F E+   L  
Sbjct: 291 EPSQRPTFSELVEHLGN 307

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 74.3 bits (183), Expect = 8e-18
 Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 20/89 (22%)

Query: 1   TLWEILTFAREQ-------------PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPK 47
           TL+E+LT                       +  R+ E +    R       LP+P  CP 
Sbjct: 226 TLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-------LPRPDKCPA 278

Query: 48  EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
           E++ LM  CW+   S RP F  +   L+ 
Sbjct: 279 EVYHLMKNCWETEASFRPTFENLIPILKT 307

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 74.2 bits (183), Expect = 9e-18
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 2   LWEILTFAREQPYEDF-SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           LWEI +     PY     + +  + +    +       + QP   PK I+ +M  CW   
Sbjct: 256 LWEIFSLGL-NPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQACWALE 307

Query: 61  DSDRPNFREIHLFLQR 76
            + RP F++I  FLQ 
Sbjct: 308 PTHRPTFQQICSFLQE 323

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 72.3 bits (178), Expect = 5e-17
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 9/76 (11%)

Query: 2   LWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           LWEI +     PY     D    + I +  +       + QP    +EI+ +M  CW   
Sbjct: 264 LWEIFSLGV-NPYPGIPVDANFYKLIQNGFK-------MDQPFYATEEIYIIMQSCWAFD 315

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F  +  FL  
Sbjct: 316 SRKRPSFPNLTSFLGC 331

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 69.2 bits (170), Expect = 5e-16
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+LT   E P+       V   ++         + LP P  CP+    LM +CW    
Sbjct: 204 LWELLT--GEVPFRGIDGLAVAYGVAM------NKLALPIPSTCPEPFAKLMEDCWNPDP 255

Query: 62  SDRPNFREIHLFLQ 75
             RP+F  I   L 
Sbjct: 256 HSRPSFTNILDQLT 269

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 67.8 bits (166), Expect = 2e-15
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM--------LPQPINCPKEIFDL 52
            L+E+ T+   +     ++   +             ++        LP P  CP E+ +L
Sbjct: 219 VLYELFTYCD-KSCSPSAEFLRMMGCER-DVPALSRLLELLEEGQRLPAPPACPAEVHEL 276

Query: 53  MCECWQKHDSDRPNFREIHLFLQR 76
           M  CW     DRP+F  +   L  
Sbjct: 277 MKLCWAPSPQDRPSFSALGPQLDM 300

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 66.5 bits (162), Expect = 9e-15
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 9/77 (11%)

Query: 1   TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
            LWEI +     PY     D+     +   +R       +  P     E++  M +CW  
Sbjct: 284 LLWEIFSLGA-SPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHG 335

Query: 60  HDSDRPNFREIHLFLQR 76
             S RP F E+   L  
Sbjct: 336 EPSQRPTFSELVEHLGN 352

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 65.1 bits (159), Expect = 2e-14
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
            +E+    RE P++    + ++  +    +           I   KEI D++  CW    
Sbjct: 233 WYELHA--REWPFKTQPAEAIIWQMGTGMK------PNLSQIGMGKEISDILLFCWAFEQ 284

Query: 62  SDRPNFREIHLFLQR 76
            +RP F ++   L++
Sbjct: 285 EERPTFTKLMDMLEK 299

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 64.2 bits (157), Expect = 3e-14
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE++T  RE P+ D S+  +   ++       + +    P      +  LM  C  +  
Sbjct: 201 LWELVT--REVPFADLSNMEIGMKVAL------EGLRPTIPPGISPHVSKLMKICMNEDP 252

Query: 62  SDRPNFREIHLFLQR 76
           + RP F  I   L++
Sbjct: 253 AKRPKFDMIVPILEK 267

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 64.3 bits (157), Expect = 4e-14
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           LWE+ T   +QP+ + +  +VV  +        K   L  P N   ++  ++  CW    
Sbjct: 229 LWELAT--LQQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAIIEGCWTNEP 280

Query: 62  SDRPNFREIHLFLQR 76
             RP+F  I   L+ 
Sbjct: 281 WKRPSFATIMDLLRP 295

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 63.5 bits (155), Expect = 8e-14
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+E++T   + PY + +++  +  I    R +    +     NCPK +  LM EC +K  
Sbjct: 215 LYELMT--GQLPYSNINNRDQI--IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKR 270

Query: 62  SDRPNFREIHLFLQR 76
            +RP+F  I   ++ 
Sbjct: 271 DERPSFPRILAEIEE 285

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 63.1 bits (154), Expect = 1e-13
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L+ ILT   E P++++S       I   +    + +    P +CP  + +++  CW    
Sbjct: 218 LYTILT--GEGPFDEYSYG----KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271

Query: 62  SDRPNFREIHLFLQR 76
             RP+F  I   L  
Sbjct: 272 KKRPHFSYIVKELSE 286

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 62.7 bits (153), Expect = 1e-13
 Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 2   LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
           L EI+      P           ++  F            P NCP   F +   C     
Sbjct: 212 LCEIIGRVNADPDYLPRTMDFGLNVRGFLD-------RYCPPNCPPSFFPITVRCCDLDP 264

Query: 62  SDRPNFREIHLFLQ 75
             RP+F ++  +L+
Sbjct: 265 EKRPSFVKLEHWLE 278

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.0 bits (151), Expect = 3e-13
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 2   LWEILTFAREQPYEDFSD--QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
           LWE++T  R +P+++      R++  + + +R        P   N PK I  LM  CW K
Sbjct: 193 LWEVIT--RRKPFDEIGGPAFRIMWAVHNGTR-------PPLIKNLPKPIESLMTRCWSK 243

Query: 60  HDSDRPNFREIHLFLQR 76
             S RP+  EI   +  
Sbjct: 244 DPSQRPSMEEIVKIMTH 260

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 16/89 (17%)

Query: 2   LWEILT--------FAREQPYEDFSDQRVVEHISHFSRSTAKHIMLP------QPINCPK 47
           LWE+             + PY D                     + P          C +
Sbjct: 242 LWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMREIVCIKKLRPSFPNRWSSDECLR 299

Query: 48  EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
           ++  LM ECW  + + R     +   L +
Sbjct: 300 QMGKLMTECWAHNPASRLTALRVKKTLAK 328

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 24/93 (25%)

Query: 2   LWEILT--------FAREQPYEDF-----SDQRVVEHISHFSRSTAKHIMLPQPIN---- 44
           LWE+             + P+ D      S + + + +               P      
Sbjct: 213 LWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV------DQQRPNIPNRWFSD 266

Query: 45  -CPKEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
                +  LM ECW ++ S R     I   L +
Sbjct: 267 PTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.71
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.69
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.69
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.62
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.53
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.46
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.43
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.42
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.41
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.38
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.36
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.36
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.3
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.29
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.29
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.29
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.28
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.28
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.27
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.26
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.26
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.25
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.25
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.25
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.23
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.22
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.22
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.22
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.22
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.21
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.21
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.2
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.2
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.2
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.19
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.18
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.18
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.18
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.17
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.17
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.15
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.1
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.1
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.08
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.07
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.06
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.05
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.01
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.01
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.98
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.97
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.91
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.88
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.87
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.87
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.87
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.86
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.85
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.85
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.85
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.84
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.84
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.83
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.81
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.81
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.79
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.79
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.78
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.77
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.77
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.76
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.76
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.75
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.75
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.75
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.73
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.73
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.73
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.72
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.72
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.72
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.72
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.71
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.7
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.7
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.7
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.69
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.69
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.69
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.68
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.68
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.68
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.67
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.67
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.67
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.66
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.66
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.66
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.66
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.65
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.65
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.65
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.64
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.64
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.63
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.63
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.62
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.62
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.62
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.61
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.61
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.61
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.61
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.61
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.6
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.6
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.59
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.59
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.59
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.58
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.57
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.57
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.57
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.57
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.56
3bhy_A	283	Death-associated protein kinase 3; death associate	98.56
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.56
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.56
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.55
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.55
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.55
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.55
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.55
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.53
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.53
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.53
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.52
3niz_A	311	Rhodanese family protein; structural genomics, str	98.52
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.52
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.51
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.51
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.51
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.51
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.5
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.49
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.49
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.49
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.49
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.48
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.47
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.46
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.46
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.46
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.46
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.45
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.45
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.44
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.44
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.43
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.43
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.43
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.43
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.42
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.41
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.41
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.4
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.4
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.4
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.39
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.38
3uqc_A	286	Probable conserved transmembrane protein; structur	98.38
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.38
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.37
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.36
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.36
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.35
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.35
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.34
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.34
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.33
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.33
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.31
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.31
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.31
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.31
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.3
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.28
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.28
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.27
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.27
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.26
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.25
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.25
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.24
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.23
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.22
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.21
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.18
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.13
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.13
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.1
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.03
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.03
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.01
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.87
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.96
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.89
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	96.72
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	94.58
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	93.14
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	80.25

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.71  E-value=6e-18  Score=106.10  Aligned_cols=70  Identities=41%  Similarity=0.837  Sum_probs=62.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      +||||+|+| ..||.+.+..+++..+..+.+       ++.|..||.+++++|.+||..+|++||+|.+|+..|+++.
T Consensus       236 vl~El~t~g-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          236 VLWEVFSYG-LQPYCGYSNQDVVEMIRNRQV-------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHTTT-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            479999987 799999999999988887655       6778899999999999999999999999999999998763

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.69  E-value=2.6e-17  Score=102.87  Aligned_cols=73  Identities=37%  Similarity=0.765  Sum_probs=65.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||+|+| +.||.+.+..+++..+.++.+       ++.|..+|.+++++|.+||..+|++||||.+|...|+.+...
T Consensus       219 vl~Ellt~G-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          219 VLWEIFTYG-KQPWYQLSNNEVIECITQGRV-------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            479999977 799999999999998888765       677889999999999999999999999999999999987654


Q ss_pred             C
Q psy10555         81 Y   81 (86)
Q Consensus        81 ~   81 (86)
                      .
T Consensus       291 ~  291 (299)
T 4asz_A          291 S  291 (299)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.69  E-value=4.1e-17  Score=103.11  Aligned_cols=72  Identities=31%  Similarity=0.726  Sum_probs=64.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +||||+|+| +.||.+.+..+++..+.++.+       ++.|..++.++.++|.+||..||++||||.+|+..|+.+...
T Consensus       249 vl~Ellt~G-~~Pf~~~~~~~~~~~i~~g~~-------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          249 VLWEIFTYG-KQPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHHTTS-CCTTCSSCHHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHHcCCC-------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            479999987 799999999999888887765       777889999999999999999999999999999999998654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.62  E-value=3.8e-16  Score=99.52  Aligned_cols=71  Identities=27%  Similarity=0.582  Sum_probs=60.4

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +||||+|+| +.||.+.+ ...+...+..+.+       ++.|..++.+++++|.+||..||++||||.+|+.+|+.+..
T Consensus       276 ~l~El~t~G-~~Pf~~~~~~~~~~~~i~~g~~-------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          276 LLWEIFSLG-ASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             HHHHHTTTS-CCSSTTCCCSHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            479999987 79999876 4456666766655       77788999999999999999999999999999999998643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.53  E-value=2.1e-14  Score=90.05  Aligned_cols=77  Identities=22%  Similarity=0.397  Sum_probs=59.3

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +||||++  |+.||.+.+.. .+...+..+.+   .+.....+..++.++.+++.+||..+|++||||.+|+..|+.+..
T Consensus       226 vl~Ellt--g~~Pf~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          226 VLYELMT--GELPYSHINNRDQIIFMVGRGYA---SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHHH--SSCTTTTCCCHHHHHHHHHTTCC---CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHH--CCCCCCCCChHHHHHHHHhcCCC---CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            4799999  78999987654 44455555443   111223456899999999999999999999999999999998876


Q ss_pred             CCC
Q psy10555         80 GYN   82 (86)
Q Consensus        80 ~~~   82 (86)
                      .++
T Consensus       301 ~lp  303 (307)
T 3omv_A          301 SLP  303 (307)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            553

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.46  E-value=5.9e-14  Score=89.34  Aligned_cols=72  Identities=35%  Similarity=0.689  Sum_probs=62.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       ++.|..++.++.++|.+||..+|.+||+|.+++..|+++...
T Consensus       304 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          304 LLWETFSLG-ASPYPNLSNQQTREFVEKGGR-------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHTTS-CCSSTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            478999877 799999998888777776554       667888999999999999999999999999999999998654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.43  E-value=1.6e-13  Score=89.24  Aligned_cols=72  Identities=32%  Similarity=0.731  Sum_probs=63.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||+++| +.||.+.+..++...+..+.+       .+.|..++.++.++|.+||..+|++||+|.+|+..|+.+...
T Consensus       374 ~l~el~t~g-~~P~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          374 LLMEIVTYG-RIPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            478999878 799999998888888877655       666888999999999999999999999999999999997654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.42  E-value=8.9e-14  Score=90.42  Aligned_cols=72  Identities=28%  Similarity=0.643  Sum_probs=62.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||+++| ..||.+.+..++...+..+.+       ++.|..++.++.++|.+||..+|.+||+|.+++..|+.+...
T Consensus       375 ~l~el~t~g-~~P~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          375 LLWEIYSFG-RVPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHTTT-CCSSTTSCTTTHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            478999877 799999887777777777655       677889999999999999999999999999999999987543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.41  E-value=2.9e-13  Score=88.03  Aligned_cols=74  Identities=31%  Similarity=0.699  Sum_probs=63.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       .+.|..++..+.++|.+||..+|++||+|.+++..|+.+...
T Consensus       370 ~l~el~t~g-~~P~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          370 LLTELTTKG-RVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            478999877 799999998888888877655       666788999999999999999999999999999999997654


Q ss_pred             CC
Q psy10555         81 YN   82 (86)
Q Consensus        81 ~~   82 (86)
                      ..
T Consensus       442 ~~  443 (452)
T 1fmk_A          442 TE  443 (452)
T ss_dssp             SC
T ss_pred             CC
Confidence            33

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.38  E-value=5.3e-13  Score=88.49  Aligned_cols=74  Identities=31%  Similarity=0.699  Sum_probs=64.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      +||||++.| ..||.+....+++..+..+.+       .+.|..++..+.++|.+||..+|++||+|.+|+..|+.+...
T Consensus       453 ~l~el~t~g-~~P~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          453 LLTELTTKG-RVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHTTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            478999877 799999998888888877655       666788999999999999999999999999999999997654


Q ss_pred             CC
Q psy10555         81 YN   82 (86)
Q Consensus        81 ~~   82 (86)
                      ..
T Consensus       525 ~~  526 (535)
T 2h8h_A          525 TE  526 (535)
T ss_dssp             CS
T ss_pred             cC
Confidence            43

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.36  E-value=8.7e-13  Score=82.32  Aligned_cols=77  Identities=36%  Similarity=0.677  Sum_probs=61.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||+++| ..||.+.+..++...+..+..       ...|..++.++.+++.+||..+|.+||++.+++..|+++...
T Consensus       265 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          265 VLWEIFSYG-LQPYYGMAHEEVIYYVRDGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHHHhcC-CCcCCCCChHHHHHHHhCCCc-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            368899877 799999988888877776543       556778999999999999999999999999999999998877


Q ss_pred             CCCCC
Q psy10555         81 YNPET   85 (86)
Q Consensus        81 ~~~~~   85 (86)
                      +..++
T Consensus       337 ~~~~~  341 (343)
T 1luf_A          337 AEGTV  341 (343)
T ss_dssp             -----
T ss_pred             hhhhc
Confidence            66543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.36  E-value=8.6e-13  Score=88.79  Aligned_cols=70  Identities=30%  Similarity=0.722  Sum_probs=61.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||+++| +.||.+.+..++...+..+.+       +..|..++.++.++|.+||..+|++||+|.+++..|+.+.
T Consensus       528 ~l~ellt~G-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          528 TMWEALSYG-QKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             HHHHHHTTS-CCTTTTCCSHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            478999877 799999988888888887665       6778889999999999999999999999999999998853

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.30  E-value=1.4e-12  Score=85.75  Aligned_cols=71  Identities=37%  Similarity=0.734  Sum_probs=61.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||+++| ..||.+.+..++...+..+.+       ...|..++.++.++|.+||..+|.+||+|.+++..|+.+..
T Consensus       408 ~l~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          408 LLWEIATYG-MSPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHHHTTS-CCSSTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            478999877 799999888777777766544       66788899999999999999999999999999999998743

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.29  E-value=4.9e-12  Score=85.51  Aligned_cols=71  Identities=28%  Similarity=0.709  Sum_probs=62.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||+++| ..||.+.+..++...+..+.+       ...|..++.++.++|.+||..+|++||++.+++..|+++..
T Consensus       561 ~l~ellt~G-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          561 LMWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            478999877 799999998888888877655       66678899999999999999999999999999999998653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.29  E-value=2.1e-12  Score=82.11  Aligned_cols=71  Identities=28%  Similarity=0.656  Sum_probs=60.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       294 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          294 LMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             HHHHHHTTS-CCSSTTCCGGGHHHHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCCCCCCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            478999877 799999887777777766544       56678899999999999999999999999999999998753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=1.9e-12  Score=82.57  Aligned_cols=75  Identities=27%  Similarity=0.554  Sum_probs=61.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++..+.+++.+||..+|++||++.+++..|+++...
T Consensus       285 il~ellt~~-~~p~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          285 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHTTS-CCSCTTSCSSCHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCc-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            478999866 689988776666666665544       556778999999999999999999999999999999998766


Q ss_pred             CCC
Q psy10555         81 YNP   83 (86)
Q Consensus        81 ~~~   83 (86)
                      +..
T Consensus       357 ~~~  359 (373)
T 3c1x_A          357 FIG  359 (373)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.28  E-value=8.6e-12  Score=76.52  Aligned_cols=71  Identities=28%  Similarity=0.709  Sum_probs=60.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       +..|..++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       209 il~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          209 LMWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            368888767 799999888888777776544       55677899999999999999999999999999999998643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.28  E-value=5.8e-12  Score=78.75  Aligned_cols=72  Identities=32%  Similarity=0.797  Sum_probs=61.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       .+.+..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       243 il~ell~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          243 VMWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHTTS-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCC-CCCcccCCHHHHHHHHHcCCC-------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            368888767 799999998888887776544       566788999999999999999999999999999999987554

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.27  E-value=8.6e-12  Score=78.12  Aligned_cols=71  Identities=37%  Similarity=0.870  Sum_probs=60.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       .+.+..++..+.+++.+||..+|.+||++.+++..|+++..
T Consensus       239 il~ellt~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          239 VMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCcccCCHHHHHHHHHCCCc-------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            368888767 799999888888877776544       55677899999999999999999999999999999998643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.26  E-value=7e-12  Score=79.60  Aligned_cols=71  Identities=35%  Similarity=0.720  Sum_probs=60.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+.+..
T Consensus       275 il~ellt~g-~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          275 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            368998767 799999988888887776544       55677899999999999999999999999999999987643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.26  E-value=6.3e-12  Score=80.07  Aligned_cols=71  Identities=37%  Similarity=0.890  Sum_probs=60.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| +.||.+.+..++...+..+.+       .+.+..++..+.+++.+||..+|.+||++.+++..|+.+..
T Consensus       239 il~ellt~g-~~P~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          239 VLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             HHHHHHTTC--CTTTTCCHHHHHHHHHTTEE-------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            468988777 799999988888877776654       55677899999999999999999999999999999998643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.25  E-value=9.9e-12  Score=75.08  Aligned_cols=71  Identities=25%  Similarity=0.451  Sum_probs=58.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++  ++.||.+.+..++...+....      .++..|..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       200 il~el~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          200 LLWELVT--REVPFADLSNMEIGMKVALEG------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHH--CSCTTTTSCHHHHHHHHHHSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHh--CCCCccccChHHHHHHHHhcC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            4689999  689999988777665554321      2356677899999999999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.25  E-value=1e-11  Score=77.17  Aligned_cols=76  Identities=25%  Similarity=0.449  Sum_probs=59.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++  +..||.+.+..++...+....      .....|..++.++.+++.+||..+|.+||++.++++.|+.+...
T Consensus       228 il~ellt--g~~Pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          228 ILWELAT--LQQPWGNLNPAQVVAAVGFKC------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHH--CCCTTTTSCHHHHHHHHHHSC------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcC------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            4789999  789999988877766664322      22566788999999999999999999999999999999998765


Q ss_pred             CCCC
Q psy10555         81 YNPE   84 (86)
Q Consensus        81 ~~~~   84 (86)
                      ..+.
T Consensus       300 ~~p~  303 (309)
T 3p86_A          300 AVPP  303 (309)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            5443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=6.8e-12  Score=76.84  Aligned_cols=71  Identities=30%  Similarity=0.712  Sum_probs=59.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       +..|..++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       202 il~ellt~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          202 TMWEALSYG-QKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             HHHHHHTTS-CCTTTTCCTHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCcccCCHHHHHHHHhcCCc-------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            368888767 799999887777777776544       56678899999999999999999999999999999998643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.23  E-value=1.2e-11  Score=76.99  Aligned_cols=75  Identities=32%  Similarity=0.693  Sum_probs=61.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       230 il~ellt~g-~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          230 LLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHGGGTCC-------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCC-CCCCCCCcHHHHHHHhhcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            368888766 699999888877777665543       555678899999999999999999999999999999987665


Q ss_pred             CCC
Q psy10555         81 YNP   83 (86)
Q Consensus        81 ~~~   83 (86)
                      ...
T Consensus       302 ~~~  304 (327)
T 1fvr_A          302 RKT  304 (327)
T ss_dssp             SSC
T ss_pred             hcC
Confidence            543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.22  E-value=8.5e-12  Score=76.20  Aligned_cols=71  Identities=34%  Similarity=0.728  Sum_probs=59.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       .+.+..++..+.+++.+||..+|.+||++.+++..|+++..
T Consensus       206 ~l~ell~~g-~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          206 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             HHHHHHTTS-CCTTTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-CCCCCcCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            368888656 799998887777777766543       55677899999999999999999999999999999998754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.22  E-value=1.2e-11  Score=75.01  Aligned_cols=72  Identities=24%  Similarity=0.595  Sum_probs=59.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||...+.......+..+..       ...|..++..+.+++.+||..+|.+||++.++++.|+.+...
T Consensus       194 il~~l~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          194 LMWEVFSLG-KMPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHHHcCC-CCCccccChHHHHHHHHcCCC-------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            367888766 799999888877777765543       555677899999999999999999999999999999998654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.22  E-value=1.7e-11  Score=74.42  Aligned_cols=71  Identities=31%  Similarity=0.594  Sum_probs=59.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++..+.+++.+||..+|.+||++.+++++|+++..
T Consensus       196 ~l~~ll~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          196 LMWEVFSEG-KIPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCC-CCCCCCCCHHHHHHHHhcCcc-------CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            367888766 799999888888777776543       55567789999999999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.22  E-value=1.7e-11  Score=74.09  Aligned_cols=71  Identities=31%  Similarity=0.594  Sum_probs=59.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++..+.+++.+||..+|.+||++.+++..|+++..
T Consensus       194 il~~l~~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          194 LMWEVFSEG-KIPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhccC-CCCCCCCCHHHHHHHHhcCCc-------CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            367888766 799999888887777776543       45567789999999999999999999999999999998754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.21  E-value=1.2e-11  Score=76.26  Aligned_cols=72  Identities=31%  Similarity=0.701  Sum_probs=59.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+++...
T Consensus       241 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          241 LLWEIVTLG-GNPYPGIPPERLFNLLKTGHR-------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHTTS-CCSSTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHhhcCCc-------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            368888867 699998887777776665443       556778999999999999999999999999999999997654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.21  E-value=2e-11  Score=76.28  Aligned_cols=71  Identities=28%  Similarity=0.656  Sum_probs=60.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       248 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          248 LMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCcCcCCHHHHHHHHhcCCC-------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            368888867 799999888887777766543       55677899999999999999999999999999999998754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.21  E-value=1e-11  Score=75.69  Aligned_cols=71  Identities=27%  Similarity=0.639  Sum_probs=58.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||...+..++...+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+.+..
T Consensus       203 il~~l~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          203 LLWEIYSFG-RVPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             HHHHHHTTS-CCSCTTSCGGGHHHHHTTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHhcCCC-------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            368888766 799998877777766665443       55677899999999999999999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.20  E-value=1.2e-11  Score=77.21  Aligned_cols=71  Identities=30%  Similarity=0.739  Sum_probs=59.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+...+...+..+.+       .+.+..++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       208 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTTS-CCTTTTCCGGGHHHHHHTTCC-------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHhcC-CCCccCCCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            368888877 799998887777666665543       55677899999999999999999999999999999988643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.20  E-value=1.9e-11  Score=74.44  Aligned_cols=72  Identities=31%  Similarity=0.634  Sum_probs=60.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       199 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          199 LLTEIVTHG-RIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCcccCHHHHHHHHhcccC-------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            368888766 799999888887777766543       555678999999999999999999999999999999986543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.20  E-value=2.2e-11  Score=77.57  Aligned_cols=71  Identities=30%  Similarity=0.657  Sum_probs=60.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++.++.+++.+||..+|.+||++.++++.|+++..
T Consensus       282 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          282 LLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHTTCC-------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            368888767 699999988888877776544       56678899999999999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.19  E-value=2.4e-11  Score=74.14  Aligned_cols=71  Identities=27%  Similarity=0.630  Sum_probs=59.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||...+..+....+..+.+       ...|..++..+.+++.+||..+|.+||++.+++.+|+++..
T Consensus       210 ~l~~l~t~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          210 LMWEIYSLG-KMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCccccChhHHHHHHhcccC-------CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            368888766 799999888887777776543       55567889999999999999999999999999999998753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.19  E-value=1.7e-11  Score=74.80  Aligned_cols=70  Identities=36%  Similarity=0.740  Sum_probs=57.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||...+...+...+..+.+       .+.+..++..+.+++.+||..+|.+||++.+++..|+.+.
T Consensus       203 il~~llt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          203 CMWEILSFG-KQPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             HHHHHHTTT-CCTTTTSCGGGHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCcccCChHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            368888766 799988777666666665443       5557789999999999999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.18  E-value=1.1e-11  Score=79.00  Aligned_cols=64  Identities=22%  Similarity=0.295  Sum_probs=55.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+..       ++.+..++.++.+|+.+||..||++|||+.+++++
T Consensus       214 ilyemlt--G~~PF~~~~~~~~~~~i~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          214 VLYELCT--LKHAFEAGSMKNLVLKIISGSF-------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCcCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4799999  7899999998888888877644       45567899999999999999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.18  E-value=1.2e-11  Score=77.09  Aligned_cols=71  Identities=30%  Similarity=0.658  Sum_probs=59.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       206 ~l~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          206 TVWELMTFG-AEPYAGLRLAEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHHHHTTS-CCTTTTSCTTHHHHHHHTTCB-------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHhCC-CCCccccCHHHHHHHHHcCCC-------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            368888867 799998887777777766544       56677788999999999999999999999999999998743

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.17  E-value=2e-11  Score=76.32  Aligned_cols=71  Identities=30%  Similarity=0.729  Sum_probs=59.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       .+.+..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       208 il~ell~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTTS-CCTTTTCCGGGHHHHHHTTCC-------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            368888867 799999887777766665543       56677899999999999999999999999999999998753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.17  E-value=1.3e-11  Score=76.36  Aligned_cols=73  Identities=32%  Similarity=0.670  Sum_probs=60.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.| ..||.+.+...+...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+++...
T Consensus       238 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          238 TMWEIATRG-MTPYPGVQNHEMYDYLLHGHR-------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             HHHHHHTTS-CCSSTTCCGGGHHHHHHTTCC-------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-CCCCccCCHHHHHHHHHcCCC-------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            368888866 799998887777766665543       556778999999999999999999999999999999998665


Q ss_pred             C
Q psy10555         81 Y   81 (86)
Q Consensus        81 ~   81 (86)
                      .
T Consensus       310 l  310 (313)
T 3brb_A          310 L  310 (313)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.17  E-value=3.2e-11  Score=73.08  Aligned_cols=69  Identities=32%  Similarity=0.637  Sum_probs=55.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  +..||.+.+.......+....      ...+.+..++..+.+++.+||..+|.+||++.++++.|+++
T Consensus       203 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          203 LLWELLT--GEVPFRGIDGLAVAYGVAMNK------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHH--CCCTTTTSCHHHHHHHHHTSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHhhhcCC------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            3688999  789999988776665555432      22455778999999999999999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.17  E-value=4e-11  Score=74.66  Aligned_cols=70  Identities=36%  Similarity=0.738  Sum_probs=58.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++..+.+++.+||..+|.+||++.+++..|+.+.
T Consensus       234 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          234 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCCCCcCHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            368888767 799998888877777766544       5556789999999999999999999999999999998764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.16  E-value=3.1e-11  Score=74.08  Aligned_cols=75  Identities=27%  Similarity=0.554  Sum_probs=60.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.+ ..||.+.+..++...+..+.+       ...|..++..+.+++.+||..+|.+||++.++++.|+++...
T Consensus       221 il~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          221 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHHTTS-CCSSTTSCTTTHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC-CCCCccCCHHHHHHHHhcCCC-------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            367888856 678887776666666655443       455778899999999999999999999999999999998776


Q ss_pred             CCC
Q psy10555         81 YNP   83 (86)
Q Consensus        81 ~~~   83 (86)
                      +..
T Consensus       293 ~~~  295 (298)
T 3f66_A          293 FIG  295 (298)
T ss_dssp             SCC
T ss_pred             hcc
Confidence            654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.15  E-value=5e-11  Score=73.84  Aligned_cols=70  Identities=40%  Similarity=0.752  Sum_probs=58.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+..++...+..+..       ...+..++..+.+++.+||..+|.+||++.+++..|+++.
T Consensus       229 il~el~~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          229 VLWEIATLA-EQPYQGLSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHHTS-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHhcC-CCccccCCHHHHHHHHHcCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            368888866 799999888887777766443       4557789999999999999999999999999999998863

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.14  E-value=2.9e-11  Score=75.05  Aligned_cols=71  Identities=31%  Similarity=0.665  Sum_probs=59.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       228 il~ell~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          228 TMWEIMTRG-QTPYAGIENAEIYNYLIGGNR-------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHHHHHTTS-CCTTTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCccccChHHHHHHHhcCCC-------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            368888866 799999887777776665443       55677899999999999999999999999999999998643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.14  E-value=1e-11  Score=78.80  Aligned_cols=71  Identities=13%  Similarity=0.159  Sum_probs=56.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++  |+.||.+.+..+++..+..+..     .....|+.++.++.+++.+||..||.+|||+.|+++++....
T Consensus       245 ilyemlt--G~~Pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l  315 (336)
T 4g3f_A          245 MMLHMLN--GCHPWTQYFRGPLCLKIASEPP-----PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL  315 (336)
T ss_dssp             HHHHHHH--SSCSSTTTCCSCCHHHHHHSCC-----GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHH--CcCCCCCCCHHHHHHHHHcCCC-----CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            4799999  7899998776666666665422     112346789999999999999999999999999999887643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.14  E-value=5.5e-11  Score=80.68  Aligned_cols=70  Identities=34%  Similarity=0.752  Sum_probs=60.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++.| ..||.+.+..+++..+..+.+       ++.|..++..+.+++.+||..+|.+||++.+++..|+++.
T Consensus       581 il~ellt~g-~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          581 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            368988766 799999988888887776544       5667889999999999999999999999999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.13  E-value=1e-10  Score=71.42  Aligned_cols=72  Identities=31%  Similarity=0.813  Sum_probs=58.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.+..++...+....      ...+.+..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       213 il~~l~~~g-~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          213 TLWEMFTYG-QEPWIGLNGSQILHKIDKEG------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHhCC-CCCcccCCHHHHHHHHHccC------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            367888766 79999988877776665422      2255567899999999999999999999999999999998754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=5.5e-11  Score=72.80  Aligned_cols=74  Identities=28%  Similarity=0.610  Sum_probs=58.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.+ .+||...+...+...+..+..       .+.+..++..+.+++.+||..+|.+||++.+++..|+++...
T Consensus       217 il~~l~~g~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          217 LLWELLTRG-APPYRHIDPFDLTHFLAQGRR-------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             HHHHHHHTS-CCTTTTSCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCC-CCCCccCCHHHHHHHhhcCCC-------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            368888855 566777777666666665443       556778999999999999999999999999999999997655


Q ss_pred             CC
Q psy10555         81 YN   82 (86)
Q Consensus        81 ~~   82 (86)
                      +.
T Consensus       289 l~  290 (298)
T 3pls_A          289 LL  290 (298)
T ss_dssp             CC
T ss_pred             Hh
Confidence            43

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.11  E-value=7.6e-11  Score=72.61  Aligned_cols=75  Identities=24%  Similarity=0.591  Sum_probs=57.4

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+.... .+...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++..|+++..
T Consensus       236 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          236 FLWELFSLG-SSPYPGMPVDSKFYKMIKEGFR-------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             HHHHHHTTT-CCSSTTCCSSHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCcccchhHHHHHhccCCC-------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            368888766 7999886643 34444444332       45567889999999999999999999999999999999766


Q ss_pred             CCCC
Q psy10555         80 GYNP   83 (86)
Q Consensus        80 ~~~~   83 (86)
                      ....
T Consensus       308 ~~~~  311 (313)
T 1t46_A          308 ESTN  311 (313)
T ss_dssp             HTCC
T ss_pred             Hhhc
Confidence            5444

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.10  E-value=1.3e-10  Score=71.97  Aligned_cols=73  Identities=32%  Similarity=0.600  Sum_probs=56.6

Q ss_pred             CEeceeecCCCCCCCCCC--HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFS--DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++  |..||....  ...+...+..+.+       ++.+..++..+.+++.+||..+|.+||++.+++..|+.+.
T Consensus       192 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          192 ILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTR-------PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             HHHHHHH--TCCTTTTTCSSHHHHHHHHHTTCC-------CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             HHHHHHH--CCCCchhhCccHHHHHHHHhcCCC-------CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            3689999  789998653  3334444444332       5556789999999999999999999999999999999986


Q ss_pred             cCCC
Q psy10555         79 LGYN   82 (86)
Q Consensus        79 ~~~~   82 (86)
                      ..+.
T Consensus       263 ~~~~  266 (307)
T 2eva_A          263 RYFP  266 (307)
T ss_dssp             GGCC
T ss_pred             Hhcc
Confidence            6554

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.10  E-value=7.3e-11  Score=72.95  Aligned_cols=72  Identities=21%  Similarity=0.401  Sum_probs=56.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++  +..||...+...+...+..+.++      ...+..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       232 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          232 IWYELHA--REWPFKTQPAEAIIWQMGTGMKP------NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHHH--SSCSSSSCCHHHHHHHHHTTCCC------CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHhccCCCC------CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            4689999  78999998888777777665431      122346788999999999999999999999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=1.1e-10  Score=72.96  Aligned_cols=73  Identities=26%  Similarity=0.535  Sum_probs=55.3

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+.+.. .+...+..+.+       ...|..++.++.+++.+||..+|.+||++.+++.+|+.+..
T Consensus       263 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          263 LLWEIFSLG-VNPYPGIPVDANFYKLIQNGFK-------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHHTTTS-CCSSTTCCCSHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHcCC-CCCcccCCcHHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            468888766 7999887643 33444444322       55677889999999999999999999999999999998765


Q ss_pred             CC
Q psy10555         80 GY   81 (86)
Q Consensus        80 ~~   81 (86)
                      ..
T Consensus       335 ~~  336 (344)
T 1rjb_A          335 DA  336 (344)
T ss_dssp             --
T ss_pred             HH
Confidence            43

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.09  E-value=1.2e-10  Score=73.07  Aligned_cols=71  Identities=25%  Similarity=0.542  Sum_probs=55.9

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+... ..+...+..+..       ...|..++.++.+++.+||..+|.+||++.+++.+|+++..
T Consensus       284 il~ellt~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          284 LLWEIFSLG-ASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             HHHHHTTTS-CCSSTTCCCSHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-CCCCCccchhHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            368888766 799988653 344445544433       55677899999999999999999999999999999998653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.08  E-value=1e-10  Score=71.41  Aligned_cols=70  Identities=37%  Similarity=0.752  Sum_probs=57.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++.| ..||.+.+...+...+....+       ...|..++..+.+++.+||..+|.+||++.++++.|+.+.
T Consensus       201 il~~ll~~g-~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          201 LLWEIATYG-MSPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             HHHHHHTTS-CCSSTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHhccCC-------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            367888766 799998887777766665433       5567789999999999999999999999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.08  E-value=9.1e-11  Score=71.65  Aligned_cols=69  Identities=26%  Similarity=0.532  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCCHHH--HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQR--VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~--i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  ++.||...+...  ....+...      +..+..+..++.++.+++.+||..+|.+||++.++++.|+++
T Consensus       217 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          217 ILYTILT--GEGPFDEYSYGKIKFINMIREE------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHH--SSCTTTTCCCCHHHHHHHHHHS------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHc--CCCCCccccccHHHHHHHHhcc------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            4689999  789998765332  23333321      223556778999999999999999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.08  E-value=8.1e-11  Score=72.85  Aligned_cols=63  Identities=21%  Similarity=0.175  Sum_probs=54.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..++...+..+.        ...|..++.++.+++.+|+..||++|||+.+++++
T Consensus       201 ily~llt--g~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          201 ILYVMLC--RRLPFDDESIPVLFKNISNGV--------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTC--------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            4789999  789999988888887777643        45577899999999999999999999999999874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.07  E-value=7.1e-11  Score=72.46  Aligned_cols=43  Identities=37%  Similarity=0.876  Sum_probs=38.7

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCC
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGY   81 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~   81 (86)
                      .+.|..++.++.+++.+||..+|.+||++.+++..|+++....
T Consensus       251 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            6667889999999999999999999999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.07  E-value=2.3e-10  Score=70.10  Aligned_cols=74  Identities=28%  Similarity=0.530  Sum_probs=55.0

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++  +..||.+.+. ..+...+..+...   ......+..++..+.+++.+||..+|.+||++.+++..|+++..
T Consensus       214 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          214 VLYELMT--GQLPYSNINNRDQIIEMVGRGSLS---PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHH--SSCTTSSCCCHHHHHHHHHHTSCC---CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHH--CCCCccccchHHHHHHHhcccccC---cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            3689999  7899988654 4455555544321   11112235788999999999999999999999999999998754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.07  E-value=8.8e-11  Score=71.89  Aligned_cols=76  Identities=12%  Similarity=0.187  Sum_probs=54.5

Q ss_pred             CEeceeecCCCCCCCCC---CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDF---SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~---~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  |+.||.+.   ...+.+..+..+...   .........++.++.+++.+||..+|.+||++.++.+.|+++
T Consensus       207 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          207 VFMYFLR--GSLPWQGLKAATNKQKYERIGEKKQS---TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHHHHHH--SSCTTSSCCSCCHHHHHHHHHHHHHH---SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHc--CCCCcchhhccccHHHHHHHHhhccC---ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            3689998  78999874   344445544443221   000112347899999999999999999999999999999987


Q ss_pred             hcCC
Q psy10555         78 NLGY   81 (86)
Q Consensus        78 ~~~~   81 (86)
                      ....
T Consensus       282 ~~~~  285 (298)
T 1csn_A          282 LERL  285 (298)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            6543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.06  E-value=5.3e-11  Score=74.27  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=32.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++..+.++|.+||..||++||||.+|++.|+++...
T Consensus       263 ~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          263 ALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999988654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.06  E-value=1.8e-10  Score=71.04  Aligned_cols=71  Identities=25%  Similarity=0.542  Sum_probs=55.6

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++||+++.| ..||.+... ..+...+..+.+       ...+..++.++.+++.+||..+|.+||++.+++.+|+.+..
T Consensus       239 il~~l~t~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          239 LLWEIFSLG-ASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             HHHHHHTTS-CCSSTTCCCSHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCcccchhHHHHHHhccCcc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            368888766 799988653 444555554433       55567789999999999999999999999999999998643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.06  E-value=2.8e-11  Score=75.41  Aligned_cols=65  Identities=12%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+ ...+...+..+.+      +...+..+++++.+++.+||..||++|||+.+++++
T Consensus       218 ilyellt--g~~Pf~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          218 CMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCCCcHHHHHHHHHcCCC------CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4799999  789998755 4556666665433      122345678899999999999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.06  E-value=6.9e-11  Score=71.85  Aligned_cols=66  Identities=20%  Similarity=0.274  Sum_probs=55.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQ   75 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~   75 (86)
                      ++||+++  +..||...+..++...+..+..       ...|..++.++.+++.+||..+|.+||++.+++.++.
T Consensus       205 il~~l~~--g~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          205 LLYELCA--LMPPFTAFSQKELAGKIREGKF-------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHH--CCCCCcccCHHHHHHHHhhccc-------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            3689998  7899999888777777776543       4556788999999999999999999999999988654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.05  E-value=2.4e-10  Score=71.15  Aligned_cols=71  Identities=30%  Similarity=0.632  Sum_probs=54.4

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+..... +...+..+..       ...|..++..+.+++.+||..+|.+||++.+++..|+++..
T Consensus       255 il~el~t~g-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          255 LLWEIFSLG-LNPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HHHHHTTTS-CCSSTTCCSSHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC-CCCCcccchhHHHHHHHhcCCC-------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            368888767 79998865433 3333333322       45567789999999999999999999999999999988643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.01  E-value=1.6e-10  Score=72.41  Aligned_cols=63  Identities=19%  Similarity=0.286  Sum_probs=53.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+.++.        +..|..++.++.+++.+||..||++||+     +.+++++
T Consensus       215 ilyemlt--G~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          215 LMFEMLT--GTLPFQGKDRKETMTMILKAK--------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCcCHHHHHHHHHcCC--------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            4789999  789999999888888887642        4567889999999999999999999998     4677653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.01  E-value=1.2e-10  Score=74.12  Aligned_cols=66  Identities=12%  Similarity=0.120  Sum_probs=53.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+..     ...+.+..++.++.+|+.+||..||++|||+.+++++
T Consensus       259 ilyeml~--G~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          259 MVIEMVD--GEPPYFNEPPLKAMKMIRDNLP-----PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSSC-----CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHH--CCCCCCCcCHHHHHHHHHcCCC-----CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            4789999  7899999988888877765422     1233345689999999999999999999999999874

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.98  E-value=3e-10  Score=73.96  Aligned_cols=66  Identities=12%  Similarity=0.120  Sum_probs=54.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+..     .....+..++.++.+|+.+||..||++||++.+++++
T Consensus       336 ilyeml~--G~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          336 MVIEMVD--GEPPYFNEPPLKAMKMIRDNLP-----PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC-----CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHH--CCCCCCCcCHHHHHHHHHcCCC-----CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            4789999  7999999998888887776432     1233456789999999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.97  E-value=1.4e-10  Score=70.91  Aligned_cols=76  Identities=14%  Similarity=0.160  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  |+.||.+.+   ..+.+..+......   ......+..++.++.+++.+||..+|.+||++.++++.|+++
T Consensus       204 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          204 VLMYFNL--GSLPWQGLKAATKRQKYERISEKKMS---TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHHH--SSCTTSSCCCSSSSSHHHHHHHHHHH---SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCCCCcCchhhhhhhhhhcccccC---CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            4689999  789998743   22233333332220   000111357889999999999999999999999999999987


Q ss_pred             hcCC
Q psy10555         78 NLGY   81 (86)
Q Consensus        78 ~~~~   81 (86)
                      ....
T Consensus       279 ~~~~  282 (296)
T 3uzp_A          279 FHRQ  282 (296)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            5543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.95  E-value=4e-11  Score=73.31  Aligned_cols=75  Identities=15%  Similarity=0.158  Sum_probs=51.4

Q ss_pred             CEeceeecCCCCCCCCCCHH---HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQ---RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~---~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  |+.||.+.+..   +.+..+......   .........++.++.+++.+||..+|.+||++.++++.|+++
T Consensus       204 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          204 VLMYFNL--GSLPWQGLKAATKRQKYERISEKKMS---TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHHH--SSCTTSSCCCSSSSSHHHHHHHHHHH---SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhc--CCCCCcccchhhhhhhhhhhhccccc---chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            3688998  78999874322   223333332210   000011256789999999999999999999999999999986


Q ss_pred             hcC
Q psy10555         78 NLG   80 (86)
Q Consensus        78 ~~~   80 (86)
                      ...
T Consensus       279 ~~~  281 (296)
T 4hgt_A          279 FHR  281 (296)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.95  E-value=1.7e-10  Score=71.72  Aligned_cols=43  Identities=37%  Similarity=0.848  Sum_probs=38.6

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCC
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGY   81 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~   81 (86)
                      .+.+..++.++.+++.+||..+|.+||++.+++..|+.+...+
T Consensus       270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            5667889999999999999999999999999999999876554

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.94  E-value=4.1e-10  Score=68.73  Aligned_cols=70  Identities=26%  Similarity=0.390  Sum_probs=52.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++.+ ..||...+...........         ...|...+.++.+++.+||..+|.+||++.+++..|+++.+.
T Consensus       207 il~el~~g~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          207 TLWEICSGG-DKPLSALDSQRKLQFYEDR---------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHTT---------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             HHHHHHcCC-CCCccccchHHHHHHhhcc---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            368899855 5777777665544433321         344556788899999999999999999999999999997554

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.93  E-value=7.3e-10  Score=68.34  Aligned_cols=73  Identities=14%  Similarity=0.165  Sum_probs=52.9

Q ss_pred             CEeceeecCCCCCCCCC--CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDF--SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~--~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++  +..||.+.  +...+...+..+..      ....+..++.++.+++.+||..+|.+||++.+++..|+++.
T Consensus       225 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          225 LLYEMAA--LQSPFYGDKMNLYSLCKKIEQCDY------PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             HHHHHHH--SSCTTC---CCHHHHHHHHHTTCS------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCCcccchhHHHHHHHhhcccC------CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            3689998  67999763  33445555544322      12223568899999999999999999999999999999875


Q ss_pred             cCC
Q psy10555         79 LGY   81 (86)
Q Consensus        79 ~~~   81 (86)
                      ...
T Consensus       297 ~~~  299 (310)
T 2wqm_A          297 ACT  299 (310)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.91  E-value=1.5e-09  Score=66.67  Aligned_cols=63  Identities=25%  Similarity=0.328  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+..++...+..+.        ...|..++..+.+++.+||..+|.+||++.+++.+
T Consensus       202 il~~l~~--g~~p~~~~~~~~~~~~i~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          202 TLYNITT--GLYPFEGDNIYKLFENIGKGS--------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHCC--------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCchHHHHHHHHhcCC--------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            3689998  789999888777777666542        34567899999999999999999999999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.90  E-value=6.2e-10  Score=69.24  Aligned_cols=71  Identities=31%  Similarity=0.514  Sum_probs=51.1

Q ss_pred             CEeceeecCCCCCCCCCCH---------------HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC
Q psy10555          1 TLWEILTFAREQPYEDFSD---------------QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP   65 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~---------------~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp   65 (86)
                      ++||+++  +..||.....               ..+...+..+.       +.+.+..++.++.+++.+||..+|.+||
T Consensus       219 il~~ll~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rp  289 (327)
T 3lxl_A          219 VLYELFT--YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ-------RLPAPPACPAEVHELMKLCWAPSPQDRP  289 (327)
T ss_dssp             HHHHHHT--TTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHh--CCCCCccccchhhhhcccccccccHHHHHHHhhccc-------CCCCCCcccHHHHHHHHHHcCCChhhCc
Confidence            3688888  6788764322               12233333322       3566788999999999999999999999


Q ss_pred             CHHHHHHHHHHhhcC
Q psy10555         66 NFREIHLFLQRKNLG   80 (86)
Q Consensus        66 s~~~l~~~l~~~~~~   80 (86)
                      ++.+++..|+.+...
T Consensus       290 s~~ell~~L~~~~~~  304 (327)
T 3lxl_A          290 SFSALGPQLDMLWSG  304 (327)
T ss_dssp             CHHHHHHHHHHC---
T ss_pred             CHHHHHHHHHHHHhh
Confidence            999999999987543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.90  E-value=9.5e-10  Score=69.06  Aligned_cols=77  Identities=13%  Similarity=0.164  Sum_probs=49.6

Q ss_pred             CEeceeecCCCCCCCCC-CHHHHHHHHHhhhhhccccC--CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDF-SDQRVVEHISHFSRSTAKHI--MLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~-~~~~i~~~v~~~~~~~~~~~--~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++  |+.||.+. ....................  ....+..++.++.+++.+||..+|.+||++.+++..|+.+
T Consensus       249 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          249 CMLRWLC--GKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHH--SSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHHHHh--CCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            4789999  78999652 22222222222221000000  0001127889999999999999999999999999999986


Q ss_pred             hc
Q psy10555         78 NL   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       327 ~~  328 (345)
T 2v62_A          327 GI  328 (345)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.89  E-value=1e-09  Score=68.92  Aligned_cols=63  Identities=11%  Similarity=0.158  Sum_probs=53.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..++...+..+.        ...|..++.++.+++.+||..||.+||++.+++++
T Consensus       203 il~ell~--g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          203 ILYTLVS--GSLPFDGQNLKELRERVLRGK--------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3689999  789999998888877776643        34567789999999999999999999999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.87  E-value=8.8e-10  Score=68.03  Aligned_cols=66  Identities=18%  Similarity=0.228  Sum_probs=51.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+.......+.....     .....|..++..+.+++.+||..+|.+||++.+++++
T Consensus       205 il~ell~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          205 MAIEMIE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHHCS-----CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC-----CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            4789999  7899998887666555544322     1234466789999999999999999999999999874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.87  E-value=8.3e-10  Score=67.92  Aligned_cols=64  Identities=22%  Similarity=0.248  Sum_probs=52.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+...+...+..+..       ...+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       208 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          208 TAIELAR--GEPPHSELHPMKVLFLIPKNNP-------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC-------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHcc--CCCCCCCcCHHHHHHHhhcCCC-------CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            3689998  7899998887776666655432       44466789999999999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.87  E-value=1.3e-09  Score=68.81  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=51.0

Q ss_pred             CEeceeecCCCCCCCCC-CHHHHHHHHHhhhhhcccc--CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDF-SDQRVVEHISHFSRSTAKH--IMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~-~~~~i~~~v~~~~~~~~~~--~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++  |+.||.+. ...................  .....+..++.++.+++..||..+|.+||++.+|...|+.+
T Consensus       250 ~l~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          250 CMIQWLT--GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             HHHHHHH--SCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            4789999  78999863 2222222222221100000  00111257899999999999999999999999999999886


Q ss_pred             hcC
Q psy10555         78 NLG   80 (86)
Q Consensus        78 ~~~   80 (86)
                      ...
T Consensus       328 ~~~  330 (364)
T 3op5_A          328 LKA  330 (364)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=68.08  Aligned_cols=42  Identities=38%  Similarity=0.888  Sum_probs=37.8

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      .+.|..++.++.+++.+||..+|.+||++.+++..|+.+...
T Consensus       282 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            556778999999999999999999999999999999987643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.85  E-value=1.4e-09  Score=66.78  Aligned_cols=40  Identities=35%  Similarity=0.769  Sum_probs=36.8

Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555         39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus        39 ~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      .+.|..++.++.+++.+||..+|.+||++.++++.|+++.
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          262 LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            5667889999999999999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.85  E-value=1.9e-09  Score=65.60  Aligned_cols=63  Identities=24%  Similarity=0.335  Sum_probs=52.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+....+....        ...|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       196 il~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          196 LCYEFLV--GKPPFEANTYQETYKRISRVE--------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHTC--------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHH--CCCCCCCCcHHHHHHHHHhCC--------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            3688998  789999888777766665432        44567789999999999999999999999999985

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.85  E-value=2.5e-09  Score=65.70  Aligned_cols=65  Identities=20%  Similarity=0.248  Sum_probs=50.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+...+...+.....      ..+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       229 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          229 TLYCFVF--GQCPFMDERIMCLHSKIKSQAL------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCC------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHHHHH--CCCCCCCccHHHHHHHHhcccC------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            3689998  7899998877666665554321      123345788999999999999999999999998764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.84  E-value=6.9e-10  Score=68.57  Aligned_cols=73  Identities=15%  Similarity=0.220  Sum_probs=51.4

Q ss_pred             CEeceeecCCCCCCCCCC--HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFS--DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++  ++.||....  ...+...+....       ..+.+..++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       235 il~el~~--g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          235 VLYAMMF--GEGPYDMVFQKGDSVALAVQNQL-------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             HHHHHHH--SSCTTHHHHHTTSCHHHHHHCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             HHHHHHh--CCCChhhhhcccchhhHHhhccC-------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence            3688998  789986421  111222222211       14445678999999999999999999999999999999986


Q ss_pred             cCCC
Q psy10555         79 LGYN   82 (86)
Q Consensus        79 ~~~~   82 (86)
                      ...+
T Consensus       306 ~~~~  309 (317)
T 2buj_A          306 PPAP  309 (317)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            5443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.84  E-value=2.3e-09  Score=65.02  Aligned_cols=63  Identities=16%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+...+...+..+.        ...|..++..+.+++.+||..+|.+||++.+++.+
T Consensus       200 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          200 ILYALLC--GTLPFDDEHVPTLFKKIRGGV--------FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCcHHHHHHHhhcCc--------ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            3688998  689999888777776665432        34567789999999999999999999999999885

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.83  E-value=7.8e-10  Score=68.52  Aligned_cols=68  Identities=21%  Similarity=0.234  Sum_probs=45.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++||+++  +..||.+.....+...   .       ...+.+...+..+.+++.+||..+|.+||++.+++.+|+.+...
T Consensus       242 il~el~~--g~~p~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          242 ILYLLCF--RQHPFEDGAKLRIVNG---K-------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             HHHHHHH--SSCCC----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCCcchhHHHhhcC---c-------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            3688898  7899976554332211   1       11333556778899999999999999999999999999987543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.81  E-value=1.7e-09  Score=68.37  Aligned_cols=65  Identities=20%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||.+.+....+..+..+..      ....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       242 il~ell~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          242 TCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            4789999  7899998887666555554322      122345788999999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.81  E-value=7e-10  Score=73.10  Aligned_cols=74  Identities=15%  Similarity=0.238  Sum_probs=52.5

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++  |+.||.+..   ..+.+..+......   ......+..++.++.+++..||..+|.+||++.+|+..|+.+
T Consensus       202 il~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~---~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          202 VLMYFLR--GSLPWQGLKAGTKKQKYEKISEKKVA---TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHH--SSCTTSSCCCSSHHHHHHHHHHHHHH---SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCCccccchhHHHHHHHHhhcccc---ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            4789999  789998754   33344444332220   000111257889999999999999999999999999999886


Q ss_pred             hc
Q psy10555         78 NL   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       277 ~~  278 (483)
T 3sv0_A          277 FI  278 (483)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.79  E-value=9.8e-10  Score=68.50  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  |..||.+.+   ..+.+..+.......   ........+| ++.+++..||..+|.+||++.+|...|+++
T Consensus       206 il~ell~--g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          206 MFMYFLR--GSLPWQGLKADTLKERYQKIGDTKRAT---PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HHHHHHH--SSCTTTTCCCSSHHHHHHHHHHHHHHS---CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhc--CCCCccccccccHHHHHHHHHhhhccC---CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            4789999  789998854   334444444433210   0000113456 999999999999999999999999999876


Q ss_pred             hc
Q psy10555         78 NL   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       280 ~~  281 (330)
T 2izr_A          280 FD  281 (330)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.78  E-value=8.4e-09  Score=64.83  Aligned_cols=74  Identities=9%  Similarity=0.104  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCC--HHHHHHHHHhhhhhccccCCCCCC------CCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS--DQRVVEHISHFSRSTAKHIMLPQP------INCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~--~~~i~~~v~~~~~~~~~~~~~~~p------~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  |..||....  ...+..........     ....+      ..++.++.+++.+||..+|.+||++.+++.
T Consensus       257 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          257 CMLKWLY--GFLPWTNCLPNTEDIMKQKQKFVDK-----PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHH--SCCTTGGGTTCHHHHHHHHHHHHHS-----CCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHh--CCCCcccCCcCHHHHHHHHHhccCC-----hhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            4789999  789998753  33333333221110     01111      246899999999999999999999999999


Q ss_pred             HHHHhhcCC
Q psy10555         73 FLQRKNLGY   81 (86)
Q Consensus        73 ~l~~~~~~~   81 (86)
                      .|+.+....
T Consensus       330 ~L~~~~~~~  338 (352)
T 2jii_A          330 NLEALLQDL  338 (352)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999876543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.77  E-value=5.3e-09  Score=63.61  Aligned_cols=67  Identities=15%  Similarity=0.090  Sum_probs=51.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+...+...+..+...    ...+....++.++.+++.+||..+|.+||++.+++++
T Consensus       196 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          196 ILYILLV--GYPPFWDEDQHRLYAQIKAGAYD----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHH--CCCCCCCCchhHHHHHHHhcccc----CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            3688998  78999998888777777654321    1112224688999999999999999999999999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.77  E-value=3.1e-09  Score=65.18  Aligned_cols=66  Identities=23%  Similarity=0.271  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.......+..+..     .....+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       211 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          211 TLIEMAQ--IEPPHHELNPMRVLLKIAKSDP-----PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC-----CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             HHHHHhc--CCCCCccCCHHHHHHHHhccCC-----cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            3688998  7899998887766655554322     1123356788999999999999999999999999763

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.76  E-value=4.9e-09  Score=65.27  Aligned_cols=38  Identities=18%  Similarity=0.292  Sum_probs=33.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCC
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGY   81 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~   81 (86)
                      .++..+.+++.+||..+|.+||++.+++.+|+.+....
T Consensus       301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          301 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.76  E-value=7.9e-09  Score=63.61  Aligned_cols=67  Identities=13%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+...+...+..+...    ...+.+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       196 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          196 ITYILLC--GYPPFYEETESKLFEKIKEGYYE----FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHCCCC----CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHcCCCC----CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            3688998  78999988887777777665421    1122235688999999999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.76  E-value=6.4e-09  Score=64.54  Aligned_cols=39  Identities=21%  Similarity=0.464  Sum_probs=35.0

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCCC
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYN   82 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~~   82 (86)
                      .++.++.+++.+||..+|.+||++.+++.+|+.+.....
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            567789999999999999999999999999999876644

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.76  E-value=2.4e-09  Score=67.30  Aligned_cols=60  Identities=12%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI   70 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l   70 (86)
                      ++|||++  |..||.+.+..+++..+.++.        ...|..++.++.+|+.+|+..||++|+++.++
T Consensus       223 ilyeml~--G~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~  282 (311)
T 4aw0_A          223 IIYQLVA--GLPPFRAGNEGLIFAKIIKLE--------YDFPEKFFPKARDLVEKLLVLDATKRLGCEEM  282 (311)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTC--------CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCC--------CCCCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence            4789999  789999988888888887643        45577899999999999999999999999885

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.75  E-value=4.2e-09  Score=64.36  Aligned_cols=67  Identities=16%  Similarity=0.164  Sum_probs=52.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+..++...+..+...    ...+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       211 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          211 ILYILLS--GTPPFYGKNEYDILKRVETGKYA----FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC----CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCCCC----CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            3688998  78999998888777777664321    1111125688999999999999999999999999884

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.75  E-value=5.3e-09  Score=65.21  Aligned_cols=66  Identities=14%  Similarity=0.167  Sum_probs=50.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+....+.....     .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       230 il~el~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          230 MVIEMVD--GEPPYFSDSPVQAMKRLRDSPP-----PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSSC-----CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhcCCC-----CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3689999  7899998887777666654321     1122234578999999999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.75  E-value=2.7e-09  Score=66.45  Aligned_cols=36  Identities=11%  Similarity=0.156  Sum_probs=31.9

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++.++.+++.+||..+|.+|||+.++++.|+++...
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          284 GMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            345699999999999999999999999999987643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.73  E-value=1.3e-09  Score=67.05  Aligned_cols=76  Identities=16%  Similarity=0.360  Sum_probs=48.6

Q ss_pred             CEeceeecCCCCCCCCCCHH----HHHHHHHhhhhhc---cccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ----RVVEHISHFSRST---AKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~----~i~~~v~~~~~~~---~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||......    .+...+.......   ........+..++..+.+++.+||..+|.+||++.+++..
T Consensus       223 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          223 VLLEIIT--GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHH--CCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHH--CCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3688998  78999764432    2222222110000   0001112233456789999999999999999999999999


Q ss_pred             HHHhh
Q psy10555         74 LQRKN   78 (86)
Q Consensus        74 l~~~~   78 (86)
                      |+++.
T Consensus       301 L~~l~  305 (307)
T 2nru_A          301 LQEMT  305 (307)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            99874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.73  E-value=8.3e-09  Score=63.57  Aligned_cols=66  Identities=20%  Similarity=0.420  Sum_probs=48.3

Q ss_pred             CEeceeecCCCCCCCCC-CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDF-SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~-~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||... ...++...+..+..     ...+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       218 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          218 SLVELAT--GQFPYKNCKTDFEVLTKVLQEEP-----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHHH--SSCTTTTCCSHHHHHHHHHHSCC-----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHh--CCCCCCCCCccHHHHHHHhccCC-----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            4689999  68999874 44455555554322     1122234688999999999999999999999999764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.73  E-value=5e-09  Score=64.83  Aligned_cols=72  Identities=17%  Similarity=0.121  Sum_probs=53.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-NFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-s~~~l~~~l~~~~~   79 (86)
                      ++||+++  +..||.+.+...+...+.....     .....+..++.++.+++.+||..+|.+|| ++.++...|+....
T Consensus       224 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          224 VLYECLT--GSPPYQGDQLSVMGAHINQAIP-----RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             HHHHHHH--SSCSSCSCHHHHHHHHHHSCCC-----CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             HHHHHHH--CCCCCCCchHHHHHHHhccCCC-----CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            3689999  6899988765544444433211     11123467889999999999999999999 99999999988644

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.72  E-value=8.3e-09  Score=63.14  Aligned_cols=33  Identities=27%  Similarity=0.397  Sum_probs=30.7

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++.++.+++.+||..+|.+||++.++++.|+++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            557899999999999999999999999999886

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.72  E-value=6.6e-09  Score=63.34  Aligned_cols=63  Identities=17%  Similarity=0.226  Sum_probs=51.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+....+....        ...|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       201 il~~l~~--g~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          201 LCYEFLV--GMPPFDSPSHTETHRRIVNVD--------LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTTC--------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             HHHHHHH--CCCCCCCCCHhHHHHHHhccc--------cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            3688998  789999887776666555432        34567889999999999999999999999999874

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.72  E-value=9.6e-09  Score=64.08  Aligned_cols=69  Identities=12%  Similarity=0.140  Sum_probs=52.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~   76 (86)
                      ++||+++  +..||.+.+..+....+..+..      ....+  ..++.++.+++.+||..+|.+||++.+++++  +..
T Consensus       265 il~el~~--g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          265 LLHLLLM--GAVPFPGVNDADTISQVLNKKL------CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCC------CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             HHHHHHH--CCCCCCCCChHHHHHHHHhccc------ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence            4689998  7899999887777666655322      12212  3478999999999999999999999999884  444


Q ss_pred             h
Q psy10555         77 K   77 (86)
Q Consensus        77 ~   77 (86)
                      +
T Consensus       337 ~  337 (345)
T 3hko_A          337 F  337 (345)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.72  E-value=8.5e-09  Score=67.84  Aligned_cols=63  Identities=16%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+...+...+..+.        ...|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       205 il~ellt--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          205 ILYALLC--GTLPFDDDHVPTLFKKICDGI--------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             HHHHHHH--SSCSSCCSSSHHHHHHHHTTC--------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHhcCC--------cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            3689998  789999888777777776543        34567789999999999999999999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.71  E-value=9.5e-09  Score=63.67  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+.......+.....      ....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       223 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          223 TAIEMAE--GAPPLCDMHPMRALFLIPRNPA------PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC------CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCcHHHHHHHhhcCcc------ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            3689999  7899998887666555544221      122245788999999999999999999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.70  E-value=1.7e-08  Score=61.73  Aligned_cols=66  Identities=15%  Similarity=0.140  Sum_probs=48.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+..++...+.....     .........+.++.+++.+||..+|.+||++.+++.+
T Consensus       214 il~~ll~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          214 VMYFLLT--GCLPFTGTSLEEVQQKATYKEP-----NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCC-----CCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHhhhccCCc-----ccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3689999  7899999887776655544221     0011123468999999999999999999999999863

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.70  E-value=6.5e-09  Score=64.66  Aligned_cols=40  Identities=8%  Similarity=0.260  Sum_probs=34.5

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCCCCC
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGYNPE   84 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~~~~   84 (86)
                      ++.++.+++.+||..+|.+|||+.+++..|+++...+..+
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          284 AVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            4458999999999999999999999999999987666544

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.70  E-value=7.4e-09  Score=63.86  Aligned_cols=66  Identities=18%  Similarity=0.261  Sum_probs=49.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+.......+.....     .....+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       214 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          214 TAIEMAE--GKPPYADIHPMRAIFMIPTNPP-----PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC-----CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHhcCCC-----cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            3688998  7899998877665554443221     1123355678999999999999999999999999763

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.69  E-value=7.7e-09  Score=64.50  Aligned_cols=67  Identities=15%  Similarity=0.121  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||.+.+..+....+.....    ......+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       222 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          222 IAYMLLT--HTSPFVGEDNQETYLNISQVNV----DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCC----CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCCchHHHHHHHhccc----ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            3689999  7899999887776666655322    11123345788999999999999999999999999874

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.69  E-value=8.3e-09  Score=62.99  Aligned_cols=65  Identities=14%  Similarity=0.312  Sum_probs=46.9

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...... .........      ...+..|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       214 il~~l~~--g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          214 TIIEMAT--GKPPFYELGEPQAAMFKVGMF------KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHHHHH--TSCTTGGGSSHHHHHHHHHHH------CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCccCCCchhHHHHhhccc------cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            3689999  68999875432 222222111      11245567889999999999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.69  E-value=1.6e-08  Score=63.71  Aligned_cols=63  Identities=17%  Similarity=0.271  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..++...+..+.        ...|..++.++.+++.+||..+|.+||     ++.+++.+
T Consensus       194 il~ell~--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          194 VMYEMMC--GRLPFYNQDHERLFELILMEE--------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            4789999  789999988877777776532        345678899999999999999999999     89999775

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.68  E-value=9.4e-09  Score=62.38  Aligned_cols=69  Identities=14%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH--H
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP----INCPKEIFDLMCECWQKHDSDRPNFREIHLF--L   74 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p----~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l   74 (86)
                      ++||+++  +..||...+..++...+..+..        ..|    ..++..+.+++.+||..+|.+||++.+++.+  +
T Consensus       196 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~  265 (277)
T 3f3z_A          196 MMYVLLC--GYPPFSAPTDSEVMLKIREGTF--------TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF  265 (277)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCC--------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhCCC--------CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence            3689999  7899999888877777766432        222    2678999999999999999999999999864  5


Q ss_pred             HHhhc
Q psy10555         75 QRKNL   79 (86)
Q Consensus        75 ~~~~~   79 (86)
                      +....
T Consensus       266 ~~~~~  270 (277)
T 3f3z_A          266 EKQLS  270 (277)
T ss_dssp             HHHHC
T ss_pred             hcccc
Confidence            44433

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.68  E-value=4.1e-09  Score=65.92  Aligned_cols=63  Identities=16%  Similarity=0.211  Sum_probs=51.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||......+....+..+.        ...|..++..+.+++.+||..+|.+||++.+++.+
T Consensus       230 il~~l~~--g~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          230 IMYTLLV--GKPPFETSCLKETYLRIKKNE--------YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHTC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHHH--CcCCCCCCCHHHHHHHHhcCC--------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            3689999  789999887776666555432        34567889999999999999999999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.68  E-value=2.3e-08  Score=65.25  Aligned_cols=65  Identities=22%  Similarity=0.244  Sum_probs=52.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..++...+..+...      .+.+  ..++.++.+++.+||..||.+||++.+++++
T Consensus       202 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          202 ILYILLV--GYPPFWDEDQHRLYQQIKAGAYD------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHTCCC------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHHhCCCC------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            3688998  78999998888888887765431      2222  4688999999999999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.68  E-value=1e-08  Score=63.07  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-NFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-s~~~l~~~l~~~~~   79 (86)
                      ++||+++  |+.||.+.+.............+   ......+..++..+.+++.+||..+|.+|| ++.++...|+.+..
T Consensus       201 ~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          201 VLYEMLV--GEPPFNGETAVSIAIKHIQDSVP---NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             HHHHHHH--SSCSSCSSCHHHHHHHHHSSCCC---CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHhhccCC---CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            4689999  78999988766544333332110   000122457889999999999999999998 89999999988654


Q ss_pred             C
Q psy10555         80 G   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       276 ~  276 (294)
T 4eqm_A          276 E  276 (294)
T ss_dssp             S
T ss_pred             h
Confidence            4

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.67  E-value=4.5e-09  Score=64.38  Aligned_cols=63  Identities=16%  Similarity=0.211  Sum_probs=51.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||......+....+..+.        ...|..++..+.+++.+||..+|.+||++.+++.+
T Consensus       204 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          204 IMYTLLV--GKPPFETSCLKETYLRIKKNE--------YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTTC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhhcc--------CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            3688998  789999887776665555432        34567889999999999999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.67  E-value=1.9e-08  Score=64.36  Aligned_cols=65  Identities=14%  Similarity=0.215  Sum_probs=48.1

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.. ....+..+....      .....|...+.++.+++.+||..+|.+||++.+++.+
T Consensus       256 il~ell~--G~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          256 ILYYMTY--GKTPFQQIINQISKLHAIIDPN------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHHHH--SSCTTTTCCCHHHHHHHHHCTT------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH--CCCcchhhhHHHHHHHHHhCcc------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            4789998  789998754 333333343321      1244566778999999999999999999999999865

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.67  E-value=4.5e-09  Score=64.24  Aligned_cols=65  Identities=12%  Similarity=0.267  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.. ...+...+..+..      ....+...+.++.+++.+||..+|.+||++.+++.+
T Consensus       218 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          218 CMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             HHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCcCcHHHHHHHHhccCC------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            3688998  789998854 4455555554332      122345677899999999999999999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.66  E-value=1.6e-08  Score=63.97  Aligned_cols=63  Identities=16%  Similarity=0.185  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+++.+||..+|.+||+     +.+++.+
T Consensus       227 il~ell~--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          227 LIYEMAA--GYPPFFADQPIQIYEKIVSGK--------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             hHhHHhh--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            4689999  789999988888887777643        4457789999999999999999999998     8888764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.66  E-value=2e-08  Score=65.13  Aligned_cols=63  Identities=17%  Similarity=0.259  Sum_probs=52.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..++...+....        ...|..++.++.+++.+||..||.+||     ++.+++.+
T Consensus       338 il~ell~--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          338 VMYEMMC--GRLPFYNQDHEKLFELILMEE--------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHhCC--------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            4789999  789999988887777766532        345678899999999999999999999     99999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.66  E-value=1.4e-09  Score=67.10  Aligned_cols=39  Identities=26%  Similarity=0.646  Sum_probs=34.9

Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         41 QPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        41 ~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      .|..++..+.+++.+||..+|++||++.+++..|+.+..
T Consensus       244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            356788999999999999999999999999999988643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.66  E-value=1.9e-08  Score=62.12  Aligned_cols=65  Identities=14%  Similarity=0.223  Sum_probs=47.3

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||..... ......+...      ......|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       228 il~el~~--g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          228 ILYYMTY--GKTPFQQIINQISKLHAIIDP------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HHHHHHH--SSCTTTTCCSHHHHHHHHHCT------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCchhhHHHHHHHHHHHHhc------ccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            3689998  7899987543 2223333221      11244566778999999999999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.65  E-value=7.7e-09  Score=69.41  Aligned_cols=67  Identities=7%  Similarity=0.072  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+...    .....+..++.++.+|+.+||..||.+||++.+++++
T Consensus       345 ilyeml~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          345 LSYILLS--GLSPFGGENDDETLRNVKSCDWN----MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHTTCCC----CCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCcCHHHHHHHHHhCCCC----CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            3689999  78999999988888888764320    0112235688999999999999999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.65  E-value=3e-08  Score=62.16  Aligned_cols=65  Identities=14%  Similarity=0.223  Sum_probs=47.5

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+... ...+..+...      ......|...+.++.+++.+||..+|.+||++.+++.+
T Consensus       209 il~ell~--g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          209 ILYYMTY--GKTPFQQIINQISKLHAIIDP------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHHH--SSCTTTTCCSHHHHHHHHHCT------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCcchhhhhHHHHHHHHhcC------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            4689998  7899987543 2333333221      11245567788999999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.65  E-value=1.5e-08  Score=66.24  Aligned_cols=67  Identities=16%  Similarity=0.164  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+++..+..+...    ...+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       211 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          211 ILYILLS--GTPPFYGKNEYDILKRVETGKYA----FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            3689998  78999999888888877765431    0111124678999999999999999999999999885

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.64  E-value=8.5e-09  Score=64.62  Aligned_cols=71  Identities=10%  Similarity=0.091  Sum_probs=40.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.......+...+.............+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       218 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          218 IMYILLC--GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             HHHHHHH--SSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3688998  7899987654433221111111000111122225789999999999999999999999999984

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.64  E-value=9.6e-09  Score=64.16  Aligned_cols=63  Identities=13%  Similarity=0.111  Sum_probs=48.6

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCC-------------------CCCcHHHHHHHHHHhccC
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQP-------------------INCPKEIFDLMCECWQKH   60 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p-------------------~~~~~~l~~l~~~Cw~~~   60 (86)
                      ++||+++  +..||...+. .++...+..+..        ..|                   ..++.++.+++.+||..+
T Consensus       241 il~~l~~--g~~pf~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  310 (348)
T 2pml_X          241 CLYVMFY--NVVPFSLKISLVELFNNIRTKNI--------EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN  310 (348)
T ss_dssp             HHHHHHH--SSCSSCCSSCSHHHHHHHTSCCC--------CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSS
T ss_pred             HHHHHHh--CCCCCCCCCcHHHHHHHHhccCc--------CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCC
Confidence            3689999  7899988665 666666654321        222                   568899999999999999


Q ss_pred             CCCCCCHHHHHHH
Q psy10555         61 DSDRPNFREIHLF   73 (86)
Q Consensus        61 p~~Rps~~~l~~~   73 (86)
                      |.+||++.+++.+
T Consensus       311 P~~Rps~~e~l~h  323 (348)
T 2pml_X          311 PAERITSEDALKH  323 (348)
T ss_dssp             GGGSCCHHHHHTS
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999873

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.63  E-value=2e-08  Score=61.85  Aligned_cols=71  Identities=15%  Similarity=0.193  Sum_probs=47.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh-------------ccccCCCCCC----------CCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS-------------TAKHIMLPQP----------INCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~-------------~~~~~~~~~p----------~~~~~~l~~l~~~Cw   57 (86)
                      ++||+++  |..||.+.+..+....+......             ...+...+.+          +.++.++.+++.+||
T Consensus       192 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  269 (311)
T 4agu_A          192 VFAELLS--GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCL  269 (311)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHc
Confidence            3689998  78999988766554444321100             0000011111          357888999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..+|.+|||+.+++++
T Consensus       270 ~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          270 HMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CSSTTTSCCHHHHHTS
T ss_pred             cCChhhcCCHHHHhcC
Confidence            9999999999999874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.63  E-value=2.5e-08  Score=62.29  Aligned_cols=63  Identities=17%  Similarity=0.345  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+++.+||..+|.+||     ++.+++.+
T Consensus       210 il~el~~--g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          210 LMYDMLT--GAPPFTGENRKKTIDKILKCK--------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHTC--------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            3689999  789999988877777766532        345678899999999999999999999     77788764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.62  E-value=1.1e-08  Score=62.55  Aligned_cols=67  Identities=12%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+...+...+..+...    ...+....++..+.+++.+||..+|.+||++.+++.+
T Consensus       218 ~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          218 IMYTLLA--GSPPFWHRKQMLMLRMIMSGNYQ----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHH--CCCCCcCccHHHHHHHHhcCCcc----cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            3689998  78999988877766666654320    0011124678999999999999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.62  E-value=1.4e-08  Score=65.16  Aligned_cols=67  Identities=12%  Similarity=0.110  Sum_probs=51.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+....+..+..    .........++.++.+++.+||..+|.+||++.+++.+
T Consensus       239 il~ellt--g~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          239 LGYVLLS--GLSPFAGEDDLETLQNVKRCDW----EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHHCCC----CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC----CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            4789999  7899999887777766665322    11122235688999999999999999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.62  E-value=1e-08  Score=62.42  Aligned_cols=65  Identities=17%  Similarity=0.355  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.... .......+.....      ....+..++.++.+++.+||..+|.+||++.+++++
T Consensus       202 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          202 TMIELAI--LRFPYDSWGTPFQQLKQVVEEPS------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHHHH--TSCSSCCCSCHHHHHHHHHHSCC------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHH--CCCCccccCchHHHHHHHhccCC------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            3688998  789998743 3333333332211      122235688999999999999999999999999873

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.61  E-value=1e-08  Score=66.92  Aligned_cols=67  Identities=16%  Similarity=0.181  Sum_probs=52.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+++..+..+...    ...+....++.++.+++.+||..+|.+|||+.+++.+
T Consensus       216 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          216 ILYILLS--GCPPFNGANEYDILKKVEKGKYT----FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCCC----CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHcCCCC----CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            3689998  78999999888888887765321    0111124678999999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.61  E-value=1.6e-09  Score=66.76  Aligned_cols=67  Identities=12%  Similarity=0.115  Sum_probs=42.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP----INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p----~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+...+...+.....    ......+    ..++.++.+++.+||..+|.+||++.+++.+
T Consensus       187 il~el~t--g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          187 IMYILLC--GYPPFYSNHGLAISPGMKTRIR----MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             HHHHHHH--SSCSCCC-------CCSCCSSC----TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCCcchhhhHHHHHHHh----hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            4689999  7899987654433221111111    0011222    4688999999999999999999999999885

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.61  E-value=2.3e-08  Score=65.56  Aligned_cols=65  Identities=17%  Similarity=0.224  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..++...+..+..      ..+.+  ..++.++.+++.+||..+|.+|||+.+++.+
T Consensus       226 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          226 ILFILLA--GYPPFGGQTDQEILRKVEKGKY------TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCC------CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC------CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            3689998  7899999988888887776543      12222  4688999999999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.61  E-value=1.3e-08  Score=63.56  Aligned_cols=65  Identities=15%  Similarity=0.180  Sum_probs=51.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCC--CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLP--QPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~--~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+++..+..+..      ..+  ....++.++.+++.+||..+|.+||++.+++.+
T Consensus       192 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          192 LVYVLLS--GINPFLAETNQQIIENIMNAEY------TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHTCC------CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCcCCCHHHHHHHHHcCCC------CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            3689999  7899999888887777766432      011  114688999999999999999999999999885

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.61  E-value=5e-08  Score=60.12  Aligned_cols=71  Identities=10%  Similarity=-0.029  Sum_probs=48.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccc-cC-------------CC-----CCCCCCcHHHHHHHHHHhccCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAK-HI-------------ML-----PQPINCPKEIFDLMCECWQKHD   61 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~-~~-------------~~-----~~p~~~~~~l~~l~~~Cw~~~p   61 (86)
                      ++||+++  +..||.+.+..+....+......... ..             ..     ...+.++.++.+++.+|+..||
T Consensus       208 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  285 (308)
T 3g33_A          208 IFAEMFR--RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNP  285 (308)
T ss_dssp             HHHHTTT--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCC
Confidence            3689998  78999988877666555442210000 00             00     0013577899999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy10555         62 SDRPNFREIHLF   73 (86)
Q Consensus        62 ~~Rps~~~l~~~   73 (86)
                      .+|||+.+++++
T Consensus       286 ~~R~t~~e~l~h  297 (308)
T 3g33_A          286 HKRISAFRALQH  297 (308)
T ss_dssp             TTSCCHHHHHTS
T ss_pred             ccCCCHHHHhcC
Confidence            999999999874

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.60  E-value=8.8e-09  Score=64.33  Aligned_cols=67  Identities=12%  Similarity=0.091  Sum_probs=50.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+....+......    .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       206 il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          206 ITYILLS--GASPFLGDTKQETLANVSAVNYE----FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHHTCCC----CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHH--CcCCCCCCCHHHHHHHHHhcCCC----cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            3689998  78999988877777666553220    0001124678999999999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.60  E-value=2.4e-08  Score=61.97  Aligned_cols=67  Identities=13%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+.+..+....+..+...    .....+..++..+.+++.+||..+|.+||++.+++.+
T Consensus       207 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          207 ITYILLS--GASPFLGDTKQETLANITSVSYD----FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHTTCCC----CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhcccc----cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            3689999  78999988877777666653220    0011125688999999999999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.59  E-value=2.7e-08  Score=60.33  Aligned_cols=41  Identities=24%  Similarity=0.083  Sum_probs=35.5

Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcCC
Q psy10555         41 QPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLGY   81 (86)
Q Consensus        41 ~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~~   81 (86)
                      .+..++..+.+++.+||..+|.+||++.+++..|..+....
T Consensus       236 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            35678899999999999999999999999999999886553

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.59  E-value=3.7e-08  Score=62.44  Aligned_cols=65  Identities=12%  Similarity=0.082  Sum_probs=50.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCC--CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQ--PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~--p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+.......+..+..      ....  ...++..+.+++.+||..+|.+||++.+++.+
T Consensus       294 il~ell~--g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          294 ILFTLLA--GSPPFWHRRQILMLRMIMEGQY------QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCC------CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhCCC------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            4789999  7899998887777666665432      1111  14678899999999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.59  E-value=4.5e-08  Score=62.26  Aligned_cols=67  Identities=13%  Similarity=0.102  Sum_probs=51.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+...    .....+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       207 il~~ll~--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          207 ITYILLS--GASPFLGDTKQETLANITAVSYD----FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHTTCCC----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcCCC----CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3688998  78999998888887777664320    0011125678999999999999999999999999763

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.58  E-value=2.2e-08  Score=63.43  Aligned_cols=63  Identities=17%  Similarity=0.210  Sum_probs=52.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF------REIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~------~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+++.+|+..+|.+|+++      .+++.+
T Consensus       213 il~ell~--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          213 LLYEMLC--GHAPFEAENEDDLFEAILNDE--------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence            4789999  789999998888888877643        34567789999999999999999999998      777653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.57  E-value=5.1e-08  Score=64.07  Aligned_cols=65  Identities=14%  Similarity=0.090  Sum_probs=52.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCC--CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQ--PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~--p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+..+++..+..+..      ..+.  ...++.++.+++.+||..+|.+||++.+++.+
T Consensus       236 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          236 IMYILLC--GYPPFGGQNDQDIIKKVEKGKY------YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCCC------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCCC------CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            3688998  7899999988888888876532      1111  15688999999999999999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.57  E-value=1.5e-08  Score=64.26  Aligned_cols=65  Identities=17%  Similarity=0.158  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+...+...+..+..      ..+.+  ..++.++.+++.+||..+|.+||++.+++.+
T Consensus       219 il~~ll~--g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          219 ILYILLV--GYPPFWDEDQHRLYAQIKAGAY------DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCC------CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhCCC------CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            3689999  7899999888888777776532      12212  3578999999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.57  E-value=6.3e-08  Score=59.21  Aligned_cols=71  Identities=8%  Similarity=0.033  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcccc----------CC-----------CCCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKH----------IM-----------LPQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~----------~~-----------~~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |..||.+.+..+.+..+..........          ..           ......++.++.+++.+||..
T Consensus       190 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  267 (288)
T 1ob3_A          190 IFAEMVN--GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKL  267 (288)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCC
Confidence            3689998  789999887665554443311100000          00           001235788999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      ||.+||++.+++.+
T Consensus       268 dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          268 DPNQRITAKQALEH  281 (288)
T ss_dssp             STTTSCCHHHHHTS
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.56  E-value=8.1e-08  Score=59.23  Aligned_cols=63  Identities=14%  Similarity=0.178  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCC---------------HHHHHHHHHhhhhhccccCCCCCC----CCCcHHHHHHHHHHhccCC
Q psy10555          1 TLWEILTFAREQPYEDFS---------------DQRVVEHISHFSRSTAKHIMLPQP----INCPKEIFDLMCECWQKHD   61 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---------------~~~i~~~v~~~~~~~~~~~~~~~p----~~~~~~l~~l~~~Cw~~~p   61 (86)
                      ++|||++  |..||.+..               ...+...+..+.        ...|    ..++.++.+++.+||..||
T Consensus       215 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP  284 (316)
T 2ac3_A          215 ILYILLS--GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK--------YEFPDKDWAHISCAAKDLISKLLVRDA  284 (316)
T ss_dssp             HHHHHHH--SSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC--------CCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             HHHHHHH--CCCCCcccccccccccccccchhHHHHHHHHHhccC--------cccCchhcccCCHHHHHHHHHHhhCCh
Confidence            3689999  789997643               123444444432        2222    3578999999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy10555         62 SDRPNFREIHLF   73 (86)
Q Consensus        62 ~~Rps~~~l~~~   73 (86)
                      .+||++.+++++
T Consensus       285 ~~Rps~~e~l~h  296 (316)
T 2ac3_A          285 KQRLSAAQVLQH  296 (316)
T ss_dssp             TTSCCHHHHHHS
T ss_pred             hhCCCHHHHhcC
Confidence            999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.56  E-value=7.9e-09  Score=62.82  Aligned_cols=73  Identities=12%  Similarity=0.075  Sum_probs=53.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~~   78 (86)
                      ++||+++  +..||.+.+..+....+..+...    .....+..++..+.+++.+||..+|.+||++.+++.+  ++.+.
T Consensus       200 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          200 ITYILLS--GASPFLGETKQETLTNISAVNYD----FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTTCCC----CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             HHHHHHH--CCCCCCCcchHHHHHHhHhcccC----CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            3688998  68999988877766666543210    0011125678999999999999999999999999984  55554


Q ss_pred             c
Q psy10555         79 L   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       274 ~  274 (283)
T 3bhy_A          274 R  274 (283)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.56  E-value=4.4e-08  Score=62.10  Aligned_cols=63  Identities=22%  Similarity=0.358  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+++.+||..+|.+||+     +.+++.+
T Consensus       210 il~ell~--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          210 LLYEMLA--GQAPFEGEDEDELFQSIMEHN--------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            3789999  789999988888887776542        4457789999999999999999999995     5777654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.56  E-value=5e-09  Score=63.62  Aligned_cols=63  Identities=13%  Similarity=0.214  Sum_probs=44.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+..+....+...        ....|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       201 il~~l~~--g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          201 MFYTLLI--GRPPFDTDTVKNTLNKVVLA--------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             HHHHHHH--SSCSSCCCSCC-----CCSS--------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHh--CCCCCCChhHHHHHHHHhhc--------ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            3688888  68999875543333322211        134466789999999999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.55  E-value=2.4e-08  Score=61.08  Aligned_cols=71  Identities=18%  Similarity=0.210  Sum_probs=47.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccc--cCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAK--HIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~--~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||...+.................  .........++.++.+++.+||..+|.+||++.+++.+
T Consensus       216 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          216 TAIELAT--GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             HHHHHHH--SSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            3689999  78999887655444333322110000  00012234678999999999999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.55  E-value=6.9e-08  Score=59.70  Aligned_cols=71  Identities=13%  Similarity=0.067  Sum_probs=48.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc-ccc------------------CCCCCCCCCcHHHHHHHHHHhccCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST-AKH------------------IMLPQPINCPKEIFDLMCECWQKHD   61 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~-~~~------------------~~~~~p~~~~~~l~~l~~~Cw~~~p   61 (86)
                      ++||+++  +..||.+.+....+..+....... ...                  .....+..++..+.+++.+||..+|
T Consensus       208 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  285 (326)
T 1blx_A          208 IFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  285 (326)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSST
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCc
Confidence            3689998  789999887666555554321100 000                  0001124678999999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy10555         62 SDRPNFREIHLF   73 (86)
Q Consensus        62 ~~Rps~~~l~~~   73 (86)
                      .+||++.+++.+
T Consensus       286 ~~Rpt~~e~l~h  297 (326)
T 1blx_A          286 AKRISAYSALSH  297 (326)
T ss_dssp             TTSCCHHHHHTS
T ss_pred             ccCCCHHHHhcC
Confidence            999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.55  E-value=5.6e-08  Score=61.29  Aligned_cols=67  Identities=13%  Similarity=0.094  Sum_probs=49.9

Q ss_pred             CEeceeecCCCCCCCC---CCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYED---FSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~---~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+   .+..++...+..+...    .....+..++.++.+++.+||..||.+||++.+++.+
T Consensus       209 il~ell~--g~~Pf~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          209 LLYTMLT--GYTPFANGPDDTPEEILARIGSGKFS----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             HHHHHHH--SSCSSCSSTTSCHHHHHHHHHHCCCC----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHhc--CCCCCCCCCcCCHHHHHHHHccCCcc----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3689999  7899986   3456677777664331    0011235688999999999999999999999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.55  E-value=6.2e-08  Score=61.38  Aligned_cols=65  Identities=22%  Similarity=0.391  Sum_probs=44.9

Q ss_pred             CEeceeecCCCCCCCCCCH----HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD----QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~----~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.+.    ..++..+....      ...+....++.++.+++.+||..+|.+||++.+++.+
T Consensus       207 il~ell~--g~~Pf~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          207 TLYVMLV--GAYPFEDPEEPRDYRKTIQRILSVK------YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHH--SSCSCC----CCCHHHHHHHHHTTC------CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCccHHHHHHHHHHHhcCC------CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            3689998  7899987443    33333333321      1133334678999999999999999999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.55  E-value=5.6e-08  Score=60.75  Aligned_cols=63  Identities=19%  Similarity=0.270  Sum_probs=52.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+.+..+..+.        ...|..++.++.+++.+|+..+|.+|+     ++.+++.+
T Consensus       192 il~ell~--g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          192 LIYEMLA--GYTPFYDSNTMKTYEKILNAE--------LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCC--------CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            3689999  789999888877777776532        345678899999999999999999999     88888764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.53  E-value=8.7e-08  Score=60.13  Aligned_cols=71  Identities=14%  Similarity=0.026  Sum_probs=48.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCC---------------CCC-----CCCCcHHHHHHHHHHhccC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM---------------LPQ-----PINCPKEIFDLMCECWQKH   60 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~---------------~~~-----p~~~~~~l~~l~~~Cw~~~   60 (86)
                      ++||+++  |..||.+.+..+.+..+............               +..     ...++.++.+++.+||..+
T Consensus       202 il~ell~--g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  279 (346)
T 1ua2_A          202 ILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN  279 (346)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccC
Confidence            3689998  68999888776665555442210000000               000     1356789999999999999


Q ss_pred             CCCCCCHHHHHHH
Q psy10555         61 DSDRPNFREIHLF   73 (86)
Q Consensus        61 p~~Rps~~~l~~~   73 (86)
                      |.+||++.+++.+
T Consensus       280 P~~Rpt~~ell~h  292 (346)
T 1ua2_A          280 PCARITATQALKM  292 (346)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.53  E-value=5.4e-08  Score=60.69  Aligned_cols=71  Identities=11%  Similarity=-0.012  Sum_probs=47.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccC----------CCCC------------CCCCcHHHHHHHHHHhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHI----------MLPQ------------PINCPKEIFDLMCECWQ   58 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~----------~~~~------------p~~~~~~l~~l~~~Cw~   58 (86)
                      ++||+++  +..||.+.+..+.+..+...........          ....            +..++.++.+++.+||.
T Consensus       227 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  304 (329)
T 3gbz_A          227 IWAEMLM--KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE  304 (329)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC
T ss_pred             HHHHHHH--CCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHcc
Confidence            3689998  7899998877665555543211000000          0000            01167889999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy10555         59 KHDSDRPNFREIHLF   73 (86)
Q Consensus        59 ~~p~~Rps~~~l~~~   73 (86)
                      .||.+||++.+++++
T Consensus       305 ~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          305 MDPVKRISAKNALEH  319 (329)
T ss_dssp             SSGGGSCCHHHHHTS
T ss_pred             CChhhCCCHHHHhCC
Confidence            999999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.53  E-value=4.4e-08  Score=59.31  Aligned_cols=60  Identities=12%  Similarity=-0.032  Sum_probs=43.3

Q ss_pred             EeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         2 l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||+++  +..++....   ....+..+..       ...|..++.++.+++.+||..+|.+||++.+++++
T Consensus       221 l~~l~~--~~~~~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          221 VVCAAG--AEPLPRNGD---QWHEIRQGRL-------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHHHTT--CCCCCSSSH---HHHHHHTTCC-------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHHhc--CCCCCcchh---HHHHHHcCCC-------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            678887  545543332   2233444332       45567899999999999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.52  E-value=1.5e-08  Score=64.50  Aligned_cols=32  Identities=13%  Similarity=0.265  Sum_probs=27.2

Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         42 PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        42 p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..++.++.+|+.+||..||.+||++.+++.+
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            34578899999999999999999999999865

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.52  E-value=4.8e-08  Score=60.58  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=45.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccC----------------C------CCCCCCCcHHHHHHHHHHhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHI----------------M------LPQPINCPKEIFDLMCECWQ   58 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~----------------~------~~~p~~~~~~l~~l~~~Cw~   58 (86)
                      ++||+++  |..||.+.+..+....+...........                .      ....+.++.++.+++.+|+.
T Consensus       209 il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  286 (311)
T 3niz_A          209 IFAEMIT--GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLC  286 (311)
T ss_dssp             HHHHHHH--SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcC
Confidence            3689998  7899988665444444432111000000                0      00113467889999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy10555         59 KHDSDRPNFREIHLF   73 (86)
Q Consensus        59 ~~p~~Rps~~~l~~~   73 (86)
                      .||.+|||+.+++++
T Consensus       287 ~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          287 FDPNKRISARDAMNH  301 (311)
T ss_dssp             SCTTTSCCHHHHHTS
T ss_pred             CChhHCCCHHHHhcC
Confidence            999999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.52  E-value=3.2e-08  Score=63.02  Aligned_cols=67  Identities=13%  Similarity=0.094  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  +..||.+.+..+.+..+..+...    ........++.++.+++.+||..+|.+||++.+++.+
T Consensus       277 il~ellt--g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          277 IAYMLLS--GLSPFLGDNDAETLNNILACRWD----LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHTCCC----SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhccCC----CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            4689999  78999998877777666553220    0011124688999999999999999999999999873

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.51  E-value=5.6e-09  Score=66.29  Aligned_cols=58  Identities=16%  Similarity=0.070  Sum_probs=40.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++  |..||.+.+.......+            ...+..++.++.+++.+||..+|.+||++.++++
T Consensus       302 il~ellt--g~~Pf~~~~~~~~~~~~------------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          302 VIYWIWC--ADLPITKDAALGGSEWI------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHH--SSCCC------CCSGGG------------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHH--CCCCCcccccccchhhh------------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            4789999  68999765543322111            1223578899999999999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.51  E-value=5.9e-08  Score=61.70  Aligned_cols=71  Identities=15%  Similarity=0.084  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhh-hhcc--------------------ccCCCCCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFS-RSTA--------------------KHIMLPQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~-~~~~--------------------~~~~~~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||.+.+..+.+..+.+.. .+..                    .......|..++.++.+++.+||..
T Consensus       231 il~ell~--g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (383)
T 3eb0_A          231 VFGELIL--GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY  308 (383)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence            3689998  789999887665544443210 0000                    0000012456889999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      +|.+||++.+++.+
T Consensus       309 dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          309 EPDLRINPYEAMAH  322 (383)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhhCCCHHHHhcC
Confidence            99999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.51  E-value=6.5e-08  Score=60.98  Aligned_cols=66  Identities=17%  Similarity=0.097  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||.+. ..++...+..+...    ........++.++.+++.+||..+|.+||++.+++.+
T Consensus       222 il~~ll~--g~~pf~~~-~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          222 ILFILLS--GCLPFYGT-KERLFEGIIKGKYK----MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHHHHHH--SSCSSCSS-HHHHHHHHHHTCCC----CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCc-HHHHHHHHHcCCCC----CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            3689998  78999875 34455555543220    0000114678999999999999999999999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.51  E-value=3.6e-08  Score=62.72  Aligned_cols=30  Identities=20%  Similarity=0.293  Sum_probs=28.1

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+|+.+||..||.+|||+.+++.+
T Consensus       300 ~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          300 DCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence            678899999999999999999999999876

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.50  E-value=1.3e-07  Score=57.89  Aligned_cols=71  Identities=10%  Similarity=-0.001  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccc----------cCCCCC-----------CCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAK----------HIMLPQ-----------PINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~----------~~~~~~-----------p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++||+++  +..||.+.+..+....+.........          ......           .+.++.++.+++.+|+..
T Consensus       193 ~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  270 (299)
T 2r3i_A          193 IFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHY  270 (299)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCc
Confidence            3689999  78999988766555544432110000          000000           124678999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      ||++||++.+++.+
T Consensus       271 dP~~Rpt~~~~l~h  284 (299)
T 2r3i_A          271 DPNKRISAKAALAH  284 (299)
T ss_dssp             STTTSCCHHHHHTS
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.49  E-value=1.4e-08  Score=64.16  Aligned_cols=62  Identities=21%  Similarity=0.315  Sum_probs=51.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH-HHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR-EIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~-~l~~   72 (86)
                      ++|||++  |..||.+.+..++...+..+.        +..|..++.++.+++.+||..+|.+||++. +++.
T Consensus       207 il~ell~--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          207 LLYEMLI--GQSPFHGQDEEELFHSIRMDN--------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHhCC--------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            3689999  789999988888877776532        345677899999999999999999999997 6654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.49  E-value=8.3e-09  Score=64.02  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=32.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      .++..+.+++.+||..+|++||++.+++..|+.+...
T Consensus       280 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            4567889999999999999999999999999987543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.49  E-value=6.2e-08  Score=62.70  Aligned_cols=29  Identities=10%  Similarity=0.068  Sum_probs=26.5

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+|+.+||..||.+|||+.+++++
T Consensus       381 ~~~~~~dli~~~L~~dP~~Rpta~e~L~H  409 (429)
T 3kvw_A          381 DDPLFLDFLKQCLEWDPAVRMTPGQALRH  409 (429)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             chHHHHHHHHHHCCCChhhCCCHHHHhCC
Confidence            46789999999999999999999999874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.49  E-value=7.9e-08  Score=62.11  Aligned_cols=71  Identities=13%  Similarity=0.053  Sum_probs=49.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccc------------------cCCCCC-----CCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAK------------------HIMLPQ-----PINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~------------------~~~~~~-----p~~~~~~l~~l~~~Cw   57 (86)
                      ++|||++  |+.||.+.+..+.+..|.........                  +...+.     .+.++.++.+|+.+|+
T Consensus       252 il~ell~--G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL  329 (398)
T 4b99_A          252 IFGEMLA--RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML  329 (398)
T ss_dssp             HHHHHHH--TSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHC
Confidence            4789999  78999998877766666542210000                  000000     1246788999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..||.+|+|+.+++++
T Consensus       330 ~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          330 RFEPSARISAAAALRH  345 (398)
T ss_dssp             CSSTTTSCCHHHHTTS
T ss_pred             cCChhHCcCHHHHhcC
Confidence            9999999999999875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.48  E-value=6.2e-08  Score=60.30  Aligned_cols=75  Identities=11%  Similarity=0.099  Sum_probs=50.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCC----------------------CCCCCCCcHHHHHHHHHHhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM----------------------LPQPINCPKEIFDLMCECWQ   58 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~----------------------~~~p~~~~~~l~~l~~~Cw~   58 (86)
                      ++|||++  |..||.+.+..+....+............                      ...++.++.++.+++.+|+.
T Consensus       190 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  267 (324)
T 3mtl_A          190 IFYEMAT--GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQ  267 (324)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcC
Confidence            3689998  78999998876665555442210000000                      00113467889999999999


Q ss_pred             cCCCCCCCHHHHHHH--HHHh
Q psy10555         59 KHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        59 ~~p~~Rps~~~l~~~--l~~~   77 (86)
                      .||.+|||+.+++++  |..+
T Consensus       268 ~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          268 FEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             SSGGGSCCHHHHTTSGGGGGG
T ss_pred             cCcccCCCHHHHhcChhhhhc
Confidence            999999999999874  4444

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.47  E-value=4.1e-08  Score=60.36  Aligned_cols=71  Identities=13%  Similarity=0.031  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc-----------------cccCCC-----CCCCCCcHHHHHHHHHHhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST-----------------AKHIML-----PQPINCPKEIFDLMCECWQ   58 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~-----------------~~~~~~-----~~p~~~~~~l~~l~~~Cw~   58 (86)
                      ++||+++  |+.||.+.+..+.+..+.......                 ......     ..++.++.++.+++.+||.
T Consensus       214 il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  291 (320)
T 2i6l_A          214 IFAEMLT--GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILT  291 (320)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSC
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcC
Confidence            3689999  789999887665555443321000                 000000     0124688999999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy10555         59 KHDSDRPNFREIHLF   73 (86)
Q Consensus        59 ~~p~~Rps~~~l~~~   73 (86)
                      .+|.+||++.+++.+
T Consensus       292 ~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          292 FSPMDRLTAEEALSH  306 (320)
T ss_dssp             SSGGGSCCHHHHHTS
T ss_pred             CCccccCCHHHHhCC
Confidence            999999999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.46  E-value=1.9e-07  Score=58.64  Aligned_cols=31  Identities=16%  Similarity=0.364  Sum_probs=28.1

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..++.++.+++.+||..+|.+||++.+++.+
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            3578899999999999999999999999874

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.46  E-value=7.9e-08  Score=65.52  Aligned_cols=63  Identities=22%  Similarity=0.375  Sum_probs=52.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF-----REIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~-----~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+|+.+|+..+|.+|+++     .+|+.+
T Consensus       531 ilyellt--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          531 LLYEMLA--GQAPFEGEDEDELFQSIMEHN--------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHSSC--------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHhCC--------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            4789999  789999998888888877642        45577899999999999999999999997     777653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.46  E-value=2.3e-09  Score=67.61  Aligned_cols=63  Identities=14%  Similarity=0.143  Sum_probs=46.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+.....+...+..        .....|..++.++.+++.+||..||.+|||+.+++++
T Consensus       197 il~~ll~--g~~Pf~~~~~~~~~~~i~~--------~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          197 VLYVMLV--GRLPFDDEFIPNLFKKVNS--------CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHHHHH--SSCSSBCSSSTTCBCCCCS--------SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCccHHHHHHHHHc--------CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            3678888  6799977554333222221        1234567789999999999999999999999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.46  E-value=8.1e-08  Score=59.62  Aligned_cols=71  Identities=11%  Similarity=0.089  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcccc----------C----------------CCCCCCCCcHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKH----------I----------------MLPQPINCPKEIFDLMC   54 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~----------~----------------~~~~p~~~~~~l~~l~~   54 (86)
                      ++|||++  |..||.+.+..+.+..+..........          .                ....+..++.++.+++.
T Consensus       198 il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  275 (317)
T 2pmi_A          198 ILAEMIT--GKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLH  275 (317)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHH
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHH
Confidence            3689999  789999888766655554321100000          0                00112357789999999


Q ss_pred             HHhccCCCCCCCHHHHHHH
Q psy10555         55 ECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        55 ~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +||..||.+||++.+++.+
T Consensus       276 ~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          276 GLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             HHSCSSGGGSCCHHHHTTS
T ss_pred             HHCCCCcccCCCHHHHhCC
Confidence            9999999999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.45  E-value=8.9e-08  Score=60.36  Aligned_cols=67  Identities=12%  Similarity=0.042  Sum_probs=48.4

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+....+ +...+..+..    ....+....++.++.+++.+||..+|++||++.+++.+
T Consensus       239 il~ell~--g~~pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          239 ITYILLC--GFEPFYDERGDQFMFRRILNCEY----YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHHH--SSCTTCCTTCHHHHHHHHHTTCC----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCcccHHHHHHHHhCCC----ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4789999  789998765443 5555554322    01112235688999999999999999999999999874

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.45  E-value=1.2e-07  Score=58.56  Aligned_cols=74  Identities=18%  Similarity=0.106  Sum_probs=50.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH-HHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL-FLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~-~l~~~~~   79 (86)
                      ++|||++  ++.||.+.+...+.........    ......+..++.++.+++.+||..+|.+||+..+++. .+.+...
T Consensus       208 ~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          208 VLYEVLT--GEPPFTGDSPVSVAYQHVREDP----IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHCCC----CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHhcCCC----CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            4789999  7899998887665544443211    0000112468999999999999999999997666554 4555543


Q ss_pred             C
Q psy10555         80 G   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       282 ~  282 (311)
T 3ork_A          282 G  282 (311)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.44  E-value=6.5e-08  Score=58.49  Aligned_cols=65  Identities=17%  Similarity=0.134  Sum_probs=45.5

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||...+.. .....+.....      .......++..+.+++.+||..+|.+||++.+++++
T Consensus       197 il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          197 VLTAMLA--GELPWDQPSDSCQEYSDWKEKKT------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             HHHHHHH--SSCCCSCSCTTSHHHHHHHTTCT------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCchHHHHHHHhhhccc------ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            3688998  78999875532 22233322111      122234678999999999999999999999999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.44  E-value=1.7e-08  Score=62.71  Aligned_cols=68  Identities=18%  Similarity=0.377  Sum_probs=42.6

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+.. +.+..+..+..   ..........++.++.+++.+||..+|.+||++.+++.+
T Consensus       218 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          218 TLYELAT--GRFPYPKWNSVFDQLTQVVKGDP---PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             HHHHHHH--SCCCSSCC-------CCCCCSCC---CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHH--CCCCCCCcchHHHHHHHHhcCCC---CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence            3688998  68999875432 22211111111   000011124588999999999999999999999999763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.43  E-value=9.7e-08  Score=59.83  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=50.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcc------------------------ccCCCCCCCCCcHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTA------------------------KHIMLPQPINCPKEIFDLMCEC   56 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~------------------------~~~~~~~p~~~~~~l~~l~~~C   56 (86)
                      ++||+++  |+.||.+.+....+..+........                        .......+...+.++.+++.+|
T Consensus       221 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  298 (360)
T 3e3p_A          221 IFAEMML--GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL  298 (360)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHH
Confidence            4789999  7899998877665555543210000                        0000111223678899999999


Q ss_pred             hccCCCCCCCHHHHHHH--HHHh
Q psy10555         57 WQKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        57 w~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      |..+|.+||++.+++.+  |..+
T Consensus       299 L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          299 LQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             TCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             hccCccccCCHHHHhcCcccccc
Confidence            99999999999999875  4444

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.43  E-value=2.4e-08  Score=62.21  Aligned_cols=71  Identities=20%  Similarity=0.220  Sum_probs=46.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh-------------ccccCCCC----------CCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS-------------TAKHIMLP----------QPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~-------------~~~~~~~~----------~p~~~~~~l~~l~~~Cw   57 (86)
                      ++||+++  |+.||.+.+..+....+......             ...+...+          ..+.++..+.+++.+||
T Consensus       214 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  291 (331)
T 4aaa_A          214 LVTEMFM--GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCL  291 (331)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHT
T ss_pred             HHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHh
Confidence            3689998  78999987765544443321000             00000010          01357889999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..+|.+||++.+++.+
T Consensus       292 ~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          292 HIDPDKRPFCAELLHH  307 (331)
T ss_dssp             CSSGGGSCCGGGGGGS
T ss_pred             ccCcccCCCHHHHhcC
Confidence            9999999999999764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.43  E-value=9.4e-08  Score=60.33  Aligned_cols=71  Identities=14%  Similarity=0.045  Sum_probs=46.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc------------------cccCCCC-----CCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST------------------AKHIMLP-----QPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~------------------~~~~~~~-----~p~~~~~~l~~l~~~Cw   57 (86)
                      ++||+++  |..||.+.+..+.+..+.......                  .......     ..+.++.++.+++.+|+
T Consensus       221 il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  298 (364)
T 3qyz_A          221 ILAEMLS--NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML  298 (364)
T ss_dssp             HHHHHHH--SSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHH--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHc
Confidence            4689999  789998876554444433210000                  0000000     01457889999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..||.+||++.+++.+
T Consensus       299 ~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          299 TFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CSSTTTSCCHHHHHTS
T ss_pred             CCChhhCCCHHHHhcC
Confidence            9999999999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.43  E-value=7.4e-08  Score=60.10  Aligned_cols=65  Identities=17%  Similarity=0.134  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||...+.. ...........      .......++.++.+++.+||..+|.+||++.+++++
T Consensus       197 il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          197 VLTAMLA--GELPWDQPSDSCQEYSDWKEKKT------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHHHH--SSCSCSSSCTTSHHHHHHHTTCT------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCchHHHHHHHHhcccc------cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            3689999  78999875532 22222222111      122235688999999999999999999999999774

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.42  E-value=6.1e-08  Score=59.93  Aligned_cols=33  Identities=18%  Similarity=0.236  Sum_probs=28.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH--HHHh
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      .+.++.+++.+||..||.+||++.+++++  |+.+
T Consensus       301 ~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             hHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            45788999999999999999999999875  4444

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.41  E-value=6.2e-08  Score=60.32  Aligned_cols=28  Identities=25%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+||..||.+||++.+++.+
T Consensus       307 ~~~l~~li~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          307 HVQLFDLMRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            4578899999999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.41  E-value=1.6e-07  Score=58.73  Aligned_cols=31  Identities=13%  Similarity=-0.005  Sum_probs=28.3

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.++.+++.+||..||.+||++.+++.+
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            3678899999999999999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.40  E-value=1.9e-08  Score=64.56  Aligned_cols=65  Identities=12%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CEeceeecCCCCCCCCCCHH----HHHHHHHhhhhhccccCCCCC--CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ----RVVEHISHFSRSTAKHIMLPQ--PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~----~i~~~v~~~~~~~~~~~~~~~--p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..    .+...+..+..      ..+.  ...++.++.+++.+||..+|.+||++.+++.+
T Consensus       252 il~ell~--g~~pf~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          252 IMYILLC--GYPPFYSNHGLAISPGMKTRIRMGQY------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHHH--SSCSCCCCTTCSSCCSHHHHHHHTCC------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCccccccHHHHHHHHcCcc------cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            4689998  78999764422    13334444322      1221  24688999999999999999999999999886

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.40  E-value=1.8e-07  Score=58.66  Aligned_cols=68  Identities=16%  Similarity=0.069  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCC---------------------------CcHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPIN---------------------------CPKEIFDLM   53 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~---------------------------~~~~l~~l~   53 (86)
                      ++|||++  |..||.+.+.......+.......   .....+..                           .+..+.+++
T Consensus       218 il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  292 (351)
T 3mi9_A          218 IMAEMWT--RSPIMQGNTEQHQLALISQLCGSI---TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI  292 (351)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCC---CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHH
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHhCCC---ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHH
Confidence            3689999  789999888776665555432100   00000100                           256789999


Q ss_pred             HHHhccCCCCCCCHHHHHHH
Q psy10555         54 CECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        54 ~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+|+..||.+||++.+++.+
T Consensus       293 ~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          293 DKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhcCChhhCCCHHHHhCC
Confidence            99999999999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.40  E-value=2e-07  Score=59.12  Aligned_cols=71  Identities=10%  Similarity=0.015  Sum_probs=47.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc-c-------------------ccCC---CCCCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST-A-------------------KHIM---LPQPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~-~-------------------~~~~---~~~p~~~~~~l~~l~~~Cw   57 (86)
                      ++||+++  |..||.+.+..+.+..+....... .                   ....   ...++.++.++.+++.+|+
T Consensus       231 il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  308 (371)
T 4exu_A          231 IMAEMLT--GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  308 (371)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHC
Confidence            3689999  789999887665554443211000 0                   0000   0012356899999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..+|.+||++.+++++
T Consensus       309 ~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          309 ELDVDKRLTAAQALTH  324 (371)
T ss_dssp             CSCTTTSCCHHHHHTS
T ss_pred             CCChhhcCCHHHHhcC
Confidence            9999999999999875

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.39  E-value=2.9e-07  Score=57.73  Aligned_cols=71  Identities=10%  Similarity=0.007  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh--------------------ccccCC---CCCCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS--------------------TAKHIM---LPQPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~--------------------~~~~~~---~~~p~~~~~~l~~l~~~Cw   57 (86)
                      ++||+++  |..||.+.+..+.+..+......                    .....+   ...++.++.++.+++.+||
T Consensus       213 il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  290 (353)
T 3coi_A          213 IMAEMLT--GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  290 (353)
T ss_dssp             HHHHHHH--SSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHc
Confidence            3689998  78999988766554444321100                    000000   1123467899999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..+|.+||++.+++.+
T Consensus       291 ~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          291 ELDVDKRLTAAQALTH  306 (353)
T ss_dssp             CSCTTTSCCHHHHHTS
T ss_pred             CCCcccCCCHHHHhcC
Confidence            9999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.38  E-value=4.9e-08  Score=62.05  Aligned_cols=27  Identities=11%  Similarity=-0.071  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.+|+.+||..||++|||+.+++++
T Consensus       347 ~~~~dli~~mL~~dP~~Rpta~e~L~h  373 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQPYYALQH  373 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHHHHHHHhcCCChhhCCCHHHHhcC
Confidence            378899999999999999999999764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.38  E-value=1.8e-08  Score=62.05  Aligned_cols=74  Identities=11%  Similarity=0.082  Sum_probs=48.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCC--CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIML--PQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~--~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++||+++  |+.||.+.+....+........   .....  ..+..++.++.+++.+||..||.+| |+.+++..|+++.
T Consensus       191 il~ellt--g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          191 SLYALLV--NRWPLPEAGVRSGLAPAERDTA---GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HHHHHHH--SEECSCCCSBCCCSEECCBCTT---SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             HHHHHHH--CCCCCCcCCcchhhHHHHHHhc---cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            4689999  7899987654221100000000   00000  1135789999999999999999999 9999999999875


Q ss_pred             cC
Q psy10555         79 LG   80 (86)
Q Consensus        79 ~~   80 (86)
                      ..
T Consensus       265 ~~  266 (286)
T 3uqc_A          265 AV  266 (286)
T ss_dssp             C-
T ss_pred             cc
Confidence            43

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.38  E-value=1e-07  Score=59.07  Aligned_cols=33  Identities=3%  Similarity=-0.047  Sum_probs=29.4

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      .+..+.+++.+||..||++||++.+++.+..+.
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            455788999999999999999999999998864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.37  E-value=2.2e-07  Score=59.43  Aligned_cols=71  Identities=13%  Similarity=0.068  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhh-hcc----------ccCCC----------CCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSR-STA----------KHIML----------PQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~-~~~----------~~~~~----------~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||.+.+..+.+..+.+... +..          .....          ..+..++.++.+++.+||..
T Consensus       231 il~ell~--g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (394)
T 4e7w_A          231 VMAELMQ--GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY  308 (394)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence            4689999  7899998876554444332100 000          00000          01234788999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      +|.+||++.+++.+
T Consensus       309 dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          309 TPSARLTAIEALCH  322 (394)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhhCCCHHHHhcC
Confidence            99999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.36  E-value=2.6e-07  Score=58.30  Aligned_cols=63  Identities=21%  Similarity=0.237  Sum_probs=47.1

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~   71 (86)
                      ++|||++  |..||...+    ...+...+...        .++.|..++..+.+++.+||..+|.+||     ++.+++
T Consensus       251 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell  320 (355)
T 1vzo_A          251 LMYELLT--GASPFTVDGEKNSQAEISRRILKS--------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK  320 (355)
T ss_dssp             HHHHHHH--SSCTTSCTTSCCCHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH
T ss_pred             HHHHHHH--CCCCCccCCccchHHHHHHHHhcc--------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHH
Confidence            4789999  789997532    33344333321        1455678899999999999999999999     999998


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       321 ~h  322 (355)
T 1vzo_A          321 EH  322 (355)
T ss_dssp             TS
T ss_pred             cC
Confidence            75

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.36  E-value=1.6e-07  Score=60.01  Aligned_cols=58  Identities=19%  Similarity=0.212  Sum_probs=48.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR   68 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~   68 (86)
                      ++|||++  |..||.+.+..+++..+..+.        ...|..++.++.+++.+||..+|.+|+++.
T Consensus       228 il~ell~--G~~Pf~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          228 VLYEMLY--GLPPFYSRNTAEMYDNILNKP--------LQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHHHHHH--SSCTTCCSBHHHHHHHHHHSC--------CCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHhcc--------cCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            4789998  789999988888877776532        345678899999999999999999999974

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.35  E-value=3.3e-07  Score=56.07  Aligned_cols=30  Identities=13%  Similarity=-0.026  Sum_probs=27.5

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+++.+|+..||.+|||+.+++++
T Consensus       254 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          254 KLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            478899999999999999999999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.35  E-value=1.1e-07  Score=59.03  Aligned_cols=66  Identities=14%  Similarity=0.130  Sum_probs=45.6

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++  +..||...... .+...+..+...    ..+..+..++.++.+++.+||..+|.+||++.+++.
T Consensus       208 il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          208 ILFICLS--GYPPFSEHRTQVSLKDQITSGKYN----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHH--SSCSSCSTTCSSCHHHHHHHTCCC----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHh--CCCCCcccchHHHHHHHHHhCccc----cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            3688998  78999765432 334444443220    001112467899999999999999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.34  E-value=2.4e-07  Score=59.19  Aligned_cols=78  Identities=13%  Similarity=0.079  Sum_probs=50.1

Q ss_pred             CEeceeecCCCCCCCCC----CHHHHHHHHHhhhhhcc-------------ccCCCCCC----CCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDF----SDQRVVEHISHFSRSTA-------------KHIMLPQP----INCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~----~~~~i~~~v~~~~~~~~-------------~~~~~~~p----~~~~~~l~~l~~~Cw~~   59 (86)
                      ++||+++  |..||...    ...+++..+..+.....             .....+.+    ...+..+.+++.+||..
T Consensus       212 il~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~  289 (396)
T 4eut_A          212 TFYHAAT--GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA  289 (396)
T ss_dssp             HHHHHHH--SSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHH--CCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhcc
Confidence            4789999  78999753    23345555544321000             00001111    22455788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhcC
Q psy10555         60 HDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus        60 ~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ||++||++.+++..+..+...
T Consensus       290 dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          290 DQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CTTTSCCHHHHHHHHHHHHTC
T ss_pred             ChhhhccHHHHHHHHHHHhhc
Confidence            999999999999999887543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.34  E-value=1.3e-07  Score=58.79  Aligned_cols=57  Identities=25%  Similarity=0.344  Sum_probs=43.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||....  .    +..+.        ...+..++.++.+++.+||..+|.+||++.+++++
T Consensus       238 il~el~~--g~~pf~~~~--~----~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          238 LLYDMVC--GDIPFEHDE--E----IIRGQ--------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HHHHHHH--SSCSCCSHH--H----HHHCC--------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCChh--h----hhccc--------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688898  689986532  1    11211        33456789999999999999999999999999874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.33  E-value=2.9e-07  Score=59.42  Aligned_cols=71  Identities=17%  Similarity=0.110  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhh-hhc--------c--ccCCCC----------CCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFS-RST--------A--KHIMLP----------QPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~-~~~--------~--~~~~~~----------~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||.+.+..+.+..+.+.. .+.        .  .....+          .+..++.++.+|+.+||..
T Consensus       246 il~ell~--G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~  323 (420)
T 1j1b_A          246 VLAELLL--GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY  323 (420)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence            4789999  789999877554433332210 000        0  000000          1245688999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      +|.+||++.+++.+
T Consensus       324 dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          324 TPTARLTPLEACAH  337 (420)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhHCCCHHHHhCC
Confidence            99999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.33  E-value=3.2e-07  Score=56.50  Aligned_cols=57  Identities=25%  Similarity=0.410  Sum_probs=43.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||....  +    +...        ....+..++.++.+++.+||..+|.+||++.+++.+
T Consensus       228 il~~l~~--g~~pf~~~~--~----~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          228 LLYDMVC--GDIPFERDQ--E----ILEA--------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHHHHH--SSCSCCSHH--H----HHHT--------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCChH--H----Hhhh--------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3688888  688986432  1    1111        134567889999999999999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.31  E-value=5.4e-07  Score=57.15  Aligned_cols=71  Identities=10%  Similarity=0.063  Sum_probs=47.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhh-hc---------------------cc-cCCCCCCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSR-ST---------------------AK-HIMLPQPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~-~~---------------------~~-~~~~~~p~~~~~~l~~l~~~Cw   57 (86)
                      ++|||++  |+.||.+.+..+.+..+..... +.                     .. .........++..+.+++.+|+
T Consensus       215 il~ell~--g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL  292 (367)
T 1cm8_A          215 IMAEMIT--GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  292 (367)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHc
Confidence            3689998  7899998776554444432110 00                     00 0000112467899999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..||.+||++.+++.+
T Consensus       293 ~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          293 VLDAEQRVTAGEALAH  308 (367)
T ss_dssp             CSSTTTSCCHHHHHHS
T ss_pred             cCChhHCCCHHHHhcC
Confidence            9999999999999885

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.31  E-value=8.8e-08  Score=60.15  Aligned_cols=27  Identities=19%  Similarity=0.186  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         47 KEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        47 ~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.+++.+||..||.+||++.+++++
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            677899999999999999999998753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.31  E-value=3.8e-07  Score=57.26  Aligned_cols=71  Identities=8%  Similarity=0.042  Sum_probs=47.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc------------------cccCC------CCCCCCCcHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST------------------AKHIM------LPQPINCPKEIFDLMCEC   56 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~------------------~~~~~------~~~p~~~~~~l~~l~~~C   56 (86)
                      ++||+++  +..||.+.+..+....+.......                  .....      ...++..+..+.+++.+|
T Consensus       223 il~~l~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  300 (362)
T 3pg1_A          223 VMAEMFN--RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM  300 (362)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHH
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHH
Confidence            3688998  789999877665555443211000                  00000      001235678899999999


Q ss_pred             hccCCCCCCCHHHHHHH
Q psy10555         57 WQKHDSDRPNFREIHLF   73 (86)
Q Consensus        57 w~~~p~~Rps~~~l~~~   73 (86)
                      |..+|.+||++.+++++
T Consensus       301 L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          301 LEFNPQRRISTEQALRH  317 (362)
T ss_dssp             TCSSGGGSCCHHHHHTS
T ss_pred             hcCChhhCCCHHHHHcC
Confidence            99999999999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.31  E-value=2.2e-08  Score=63.42  Aligned_cols=69  Identities=9%  Similarity=-0.023  Sum_probs=44.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHH--HHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRV--VEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i--~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++  |..||.+......  ...... ..........+.+..++.++.+++.+||..+|++||++.+++.
T Consensus       282 il~ellt--g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          282 SIYRVWC--LFLPFGLVTPGIKGSWKRPSL-RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHH--SSCSTTBCCTTCTTCCCBCCT-TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHh--CCCCCCCcCcccccchhhhhh-hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            4789999  6899987643210  000000 0000011122333578999999999999999999999999976

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.30  E-value=6e-07  Score=56.62  Aligned_cols=63  Identities=11%  Similarity=0.226  Sum_probs=45.4

Q ss_pred             CEeceeecCCCCCCCCC---------CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH----
Q psy10555          1 TLWEILTFAREQPYEDF---------SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF----   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~---------~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~----   67 (86)
                      ++|||++  |..||...         ....+...+..+        ....|..++.++.+++.+||..+|.+||++    
T Consensus       199 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~  268 (345)
T 3a8x_A          199 LMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQT  268 (345)
T ss_dssp             HHHHHHH--SSCTTTTTTC-------CHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTT
T ss_pred             HHHHHHh--CCCCcCCcccccccccccHHHHHHHHHcC--------CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcC
Confidence            4789999  78999752         222334444432        145577899999999999999999999995    


Q ss_pred             --HHHHHH
Q psy10555         68 --REIHLF   73 (86)
Q Consensus        68 --~~l~~~   73 (86)
                        .+++.+
T Consensus       269 ~~~~i~~h  276 (345)
T 3a8x_A          269 GFADIQGH  276 (345)
T ss_dssp             HHHHHHTS
T ss_pred             CHHHHhcC
Confidence              666653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.28  E-value=1.7e-08  Score=62.58  Aligned_cols=33  Identities=18%  Similarity=0.351  Sum_probs=29.8

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      .+..+.+++.+||..+|.+||++.+++.+|+..
T Consensus       277 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          277 EVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            346799999999999999999999999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.28  E-value=1.1e-07  Score=60.34  Aligned_cols=28  Identities=18%  Similarity=0.127  Sum_probs=25.7

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+++.+|+..||.+|||+.+++.+
T Consensus       292 ~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          292 ASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence            5678999999999999999999999885

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.27  E-value=1.2e-07  Score=61.06  Aligned_cols=58  Identities=17%  Similarity=0.094  Sum_probs=41.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++  |+.||...+..+....+            ......++.++.+++.+||..+|.+||++.+++.
T Consensus       306 il~ellt--g~~Pf~~~~~~~~~~~~------------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          306 AIYWIWC--ADLPNTDDAALGGSEWI------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHH--SSCCCCTTGGGSCSGGG------------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHH--CCCCCCCcchhhhHHHH------------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            4789999  68999876543322211            1222467899999999999999999999666543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.27  E-value=5.3e-07  Score=57.89  Aligned_cols=62  Identities=18%  Similarity=0.344  Sum_probs=46.0

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-~~~l~~   72 (86)
                      ++|||++  |..||...+   ...++..+...        ....|..++.++.+++.+||..+|.+||+ +.++..
T Consensus       206 il~ellt--G~~Pf~~~~~~~~~~~~~~~~~~--------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          206 TAYELLR--GRRPYHIRSSTSSKEIVHTFETT--------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHH--SSCSSCCCTTSCHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHh--CCCCCCCCCCccHHHHHHHHhhc--------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            4789999  789997533   33444444332        14557789999999999999999999998 777765

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.26  E-value=1.4e-07  Score=59.32  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=27.3

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+.++.+++.+||..||.+||++.+++.+
T Consensus       304 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          304 KDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             cchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            3456788999999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.26  E-value=9.7e-08  Score=61.59  Aligned_cols=67  Identities=12%  Similarity=0.107  Sum_probs=46.4

Q ss_pred             CEeceeecCCCCCCCCCCH-HHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~-~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  |..||.+... ..+...+..+...    ..+.....++..+.+++.+||..+|.+||++.+++.+
T Consensus       333 il~~llt--g~~pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          333 ILFICLS--GYPPFSEHRTQVSLKDQITSGKYN----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHHHHHH--SSCSSCCCSSSCCHHHHHHTTCCC----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHH--CCCCCCCCcchHHHHHHHhcCCCC----CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            3688998  7899987542 2344444443220    0011124678999999999999999999999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.25  E-value=4.9e-07  Score=56.67  Aligned_cols=57  Identities=18%  Similarity=0.330  Sum_probs=42.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++||+++  +..||......      ..        .....|..++.++.+++.+||..+|.+||++.+++.+
T Consensus       219 il~el~~--g~~pf~~~~~~------~~--------~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          219 TLYTLVF--EENPFCELEET------VE--------AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHH--SSCSCSSGGGG------TT--------TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHh--CCCchhhHHHH------Hh--------hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3678887  67888653210      11        1134466789999999999999999999999999885

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.25  E-value=1.2e-06  Score=56.52  Aligned_cols=63  Identities=11%  Similarity=0.220  Sum_probs=45.5

Q ss_pred             CEeceeecCCCCCCCCCC---------HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH----
Q psy10555          1 TLWEILTFAREQPYEDFS---------DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF----   67 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---------~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~----   67 (86)
                      ++|||++  |..||....         ...+...+..+        ....|..++.++.+++.+||..+|.+|+++    
T Consensus       242 llyell~--G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~  311 (396)
T 4dc2_A          242 LMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQT  311 (396)
T ss_dssp             HHHHHHH--SSCSSTTTTC------CCHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTT
T ss_pred             HHHHHHh--CCCCCcccccccccchhhHHHHHHHHhcc--------ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCC
Confidence            4789999  789996421         22244444432        145677899999999999999999999984    


Q ss_pred             --HHHHHH
Q psy10555         68 --REIHLF   73 (86)
Q Consensus        68 --~~l~~~   73 (86)
                        .+++.+
T Consensus       312 ~~~ei~~H  319 (396)
T 4dc2_A          312 GFADIQGH  319 (396)
T ss_dssp             HHHHHHHS
T ss_pred             CHHHHhcC
Confidence              666653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.24  E-value=2.2e-07  Score=60.77  Aligned_cols=28  Identities=11%  Similarity=0.099  Sum_probs=25.4

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+|+.+|+..||.+|||+.+++++
T Consensus       329 s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          329 ASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            4568999999999999999999999875

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.23  E-value=5e-07  Score=57.41  Aligned_cols=71  Identities=14%  Similarity=0.061  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh-cc----------------c-cCCCC-----CCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS-TA----------------K-HIMLP-----QPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~-~~----------------~-~~~~~-----~p~~~~~~l~~l~~~Cw   57 (86)
                      ++|||++  |..||.+.+..+.+..+.+.... ..                . .....     ....++..+.+|+.+|+
T Consensus       219 il~ell~--g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL  296 (367)
T 2fst_X          219 IMAELLT--GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  296 (367)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhC
Confidence            3689999  78999988765554444331100 00                0 00000     01346788999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..||.+||++.+++.+
T Consensus       297 ~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          297 VLDSDKRITAAQALAH  312 (367)
T ss_dssp             CSSGGGSCCHHHHHTS
T ss_pred             CCCcccCcCHHHHhcC
Confidence            9999999999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.22  E-value=8e-07  Score=57.48  Aligned_cols=67  Identities=22%  Similarity=0.349  Sum_probs=52.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSD--RPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~--Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+...    ...+....++.++.+++.+|+..+|.+  |+++.+++.+
T Consensus       262 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          262 FLYEMLV--GDTPFYADSLVGTYSKIMNHKNS----LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTHHHH----CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCChhhHHHHHHhcccc----ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            4789999  78999998888888777664321    112323478999999999999988888  9999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.21  E-value=1.6e-07  Score=58.58  Aligned_cols=65  Identities=14%  Similarity=0.198  Sum_probs=44.5

Q ss_pred             CEeceeecCCCCCCCCCC-------HHHHHHHHHhhhhhccccCCCCC--CCCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-------DQRVVEHISHFSRSTAKHIMLPQ--PINCPKEIFDLMCECWQKHDSDRPNFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-------~~~i~~~v~~~~~~~~~~~~~~~--p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~   71 (86)
                      ++||+++  |..||.+.+       ..+++..+..+..      ....  ...++.++.+++.+||..+|.+||++.+++
T Consensus       198 il~~ll~--g~~pf~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          198 ILYTMLS--GQVPFQSHDRSLTCTSAVEIMKKIKKGDF------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HHHHHHH--SSCTTC-------CCCHHHHHHHHTTTCC------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             HHHHHHh--CCCCCCCCccccccccHHHHHHHHHcCCC------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            3689998  689997643       2345555554321      0111  135789999999999999999999999887


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       270 ~h  271 (325)
T 3kn6_A          270 YN  271 (325)
T ss_dssp             TC
T ss_pred             cC
Confidence            53

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.18  E-value=5.6e-07  Score=58.24  Aligned_cols=67  Identities=13%  Similarity=0.155  Sum_probs=48.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCC---CCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDR---PNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~R---ps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+......   ...+..+..++.++.+++.+|+. +|.+|   |++.+++.+
T Consensus       259 ilyellt--G~~Pf~~~~~~~~~~~i~~~~~~---~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          259 FAYEMFY--GQTPFYADSTAETYGKIVHYKEH---LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTHHHH---CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcccC---cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            4789998  78999998888877777653321   00111235789999999999998 99988   689998775

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.14  E-value=4e-07  Score=58.98  Aligned_cols=68  Identities=16%  Similarity=0.166  Sum_probs=42.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++.| ..||.+.....  ..+..+.... .......+..++.++.+++.+||..+|.+||++.+++.
T Consensus       228 il~ellt~g-~~Pf~~~~~~~--~~i~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          228 VFYYILSKG-KHPFGDKYSRE--SNIIRGIFSL-DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHTTS-CCTTCSTTTHH--HHHHHTCCCC-CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCC-CCCCCCchhhH--HHHhcCCCCc-ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            368888766 79997654332  1222222100 00000011234578999999999999999999999976

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.13  E-value=3.7e-07  Score=56.50  Aligned_cols=32  Identities=6%  Similarity=0.061  Sum_probs=28.9

Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         42 PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        42 p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..++.++.+++.+||..+|++||++.+++.+
T Consensus       274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          274 TAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            45788999999999999999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.13  E-value=1.1e-06  Score=58.88  Aligned_cols=62  Identities=16%  Similarity=0.278  Sum_probs=47.0

Q ss_pred             CEeceeecCCCCCCCCC----CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH-----HHHH
Q psy10555          1 TLWEILTFAREQPYEDF----SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNF-----REIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~----~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~-----~~l~   71 (86)
                      ++|||++  |..||.+.    ...++...+..+.        ...|..++.++.+++.+||..+|.+||++     .+++
T Consensus       378 ilyellt--G~~PF~~~~~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          378 TLYEMIA--ARGPFRARGEKVENKELKQRVLEQA--------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             HHHHHHH--SSCSSCCTTCCCCHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             HHHHHHh--CCCCCCCCccchhHHHHHHHHhhcc--------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            4789999  78999874    3455555554421        44567899999999999999999999975     6665


Q ss_pred             H
Q psy10555         72 L   72 (86)
Q Consensus        72 ~   72 (86)
                      .
T Consensus       448 ~  448 (543)
T 3c4z_A          448 T  448 (543)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.10  E-value=3.9e-07  Score=57.52  Aligned_cols=29  Identities=10%  Similarity=-0.008  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+..+.+|+.+||..+|++||++.+++++
T Consensus       364 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          364 EAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             HHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             hHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            35678899999999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=55.49  Aligned_cols=28  Identities=11%  Similarity=0.018  Sum_probs=25.7

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +..+.+|+.+|+..||.+|||+.+++.+
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            5678899999999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.06  E-value=5.5e-07  Score=58.44  Aligned_cols=66  Identities=9%  Similarity=0.084  Sum_probs=41.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++||+++.| ..||...........+.....     .....+...+..+.+++.+||..+|.+||++.+++.
T Consensus       218 il~ellt~g-~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          218 VFYYVISEG-SHPFGKSLQRQANILLGACSL-----DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHTTS-CBTTBSTTTHHHHHHTTCCCC-----TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCC-CCCcchhhHHHHHHHhccCCc-----cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            367888766 688876544433222111100     001112233456789999999999999999999985

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.05  E-value=1.5e-06  Score=52.91  Aligned_cols=32  Identities=16%  Similarity=-0.002  Sum_probs=28.5

Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         42 PINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        42 p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +...+..+.+++.+||..||.+||++.+++.+
T Consensus       253 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          253 DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             cccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            45677889999999999999999999999874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.05  E-value=2e-06  Score=57.99  Aligned_cols=63  Identities=14%  Similarity=0.212  Sum_probs=47.8

Q ss_pred             CEeceeecCCCCCCCCCC----HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS----DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIH   71 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~----~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~   71 (86)
                      ++|||++  |..||.+.+    ...+...+...        ....|..++.++.+++.+||..+|.+|+     ++.+++
T Consensus       374 ilyeLlt--G~~PF~~~~~~~~~~~i~~~i~~~--------~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil  443 (576)
T 2acx_A          374 LLYEMIA--GQSPFQQRKKKIKREEVERLVKEV--------PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVK  443 (576)
T ss_dssp             HHHHHHH--SSCSSSCSSSCCCHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred             HHHHHHh--CCCCCcccccchhHHHHHHHhhcc--------cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHH
Confidence            4789999  789998753    34455444432        1345678899999999999999999999     788887


Q ss_pred             HH
Q psy10555         72 LF   73 (86)
Q Consensus        72 ~~   73 (86)
                      .+
T Consensus       444 ~H  445 (576)
T 2acx_A          444 EH  445 (576)
T ss_dssp             TS
T ss_pred             hC
Confidence            64

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.03  E-value=1.6e-07  Score=58.59  Aligned_cols=30  Identities=10%  Similarity=-0.007  Sum_probs=25.9

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..++...+++.+||..||.+|||+.+++++
T Consensus       251 ~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          251 QKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            345667889999999999999999999873

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.03  E-value=2.2e-06  Score=58.89  Aligned_cols=63  Identities=14%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             CEeceeecCCCCCCCCC---CHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q psy10555          1 TLWEILTFAREQPYEDF---SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~---~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~   72 (86)
                      ++|||++  |..||.+.   +..++...+...        ....|..++.++.+|+.+|+..||.+|++     +.+++.
T Consensus       380 ilYEmLt--G~~PF~~~~~~~~~~i~~~i~~~--------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          380 MLFKLLR--GHSPFRQHKTKDKHEIDRMTLTM--------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHHH--SSCTTCGGGCCCHHHHHHHHHHC--------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHhhcCC--------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            4789999  78999763   333444444432        14567789999999999999999999998     688866


Q ss_pred             H
Q psy10555         73 F   73 (86)
Q Consensus        73 ~   73 (86)
                      |
T Consensus       450 H  450 (689)
T 3v5w_A          450 S  450 (689)
T ss_dssp             S
T ss_pred             C
Confidence            4

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.01  E-value=2e-06  Score=56.09  Aligned_cols=65  Identities=14%  Similarity=0.211  Sum_probs=50.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC---CCCcHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP---INCPKEIFDLMCECWQKHDSD--RPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p---~~~~~~l~~l~~~Cw~~~p~~--Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+......      ...|   ..++.++.+++.+|+..+|++  |+++.+++.+
T Consensus       270 il~ellt--G~~Pf~~~~~~~~~~~i~~~~~~------~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          270 CMYEMLY--GETPFYAESLVETYGKIMNHKER------FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTHHHH------CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCChhHHHHhhhhcccc------ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            4789999  78999998888877777653321      2333   458999999999998777776  9999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.97  E-value=6.8e-06  Score=52.41  Aligned_cols=31  Identities=23%  Similarity=0.300  Sum_probs=27.7

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+.+..+|+.+|+..||.+|+|+.+++++
T Consensus       323 ~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          323 NEVPDEAYDLLDKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             TTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            3567889999999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.96  E-value=6.3e-07  Score=55.51  Aligned_cols=29  Identities=17%  Similarity=0.171  Sum_probs=27.3

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++.++.+++.+||..||.+|||+.+++++
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            78999999999999999999999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.87  E-value=5.1e-07  Score=55.70  Aligned_cols=30  Identities=10%  Similarity=0.062  Sum_probs=26.7

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+||..+|.+||++.+++++
T Consensus       297 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          297 QKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             cCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            456788999999999999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.96  E-value=0.00054  Score=44.25  Aligned_cols=31  Identities=6%  Similarity=0.005  Sum_probs=28.4

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.++.+|+.+||..||.+||++.+++.+
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            3578999999999999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.89  E-value=0.00088  Score=43.39  Aligned_cols=31  Identities=10%  Similarity=0.041  Sum_probs=28.2

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.++.+|+.+|+..||.+||++.+++.+
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            3568899999999999999999999999885

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=96.72  E-value=0.00023  Score=48.99  Aligned_cols=26  Identities=8%  Similarity=-0.089  Sum_probs=20.6

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREI   70 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l   70 (86)
                      .+..+.+++.+||..||.+||++.++
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            56889999999999999999999773

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=94.58  E-value=0.0074  Score=37.86  Aligned_cols=34  Identities=9%  Similarity=0.043  Sum_probs=27.4

Q ss_pred             CcHHHHHHHHHHhccCCCCC-CCHHHHHHHHHHhh
Q psy10555         45 CPKEIFDLMCECWQKHDSDR-PNFREIHLFLQRKN   78 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~R-ps~~~l~~~l~~~~   78 (86)
                      .+..+.+++..|+..+|.+| |++.++...|+.+.
T Consensus       304 ~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          304 HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence            35678899999999999988 67888877777643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=93.14  E-value=0.091  Score=35.88  Aligned_cols=31  Identities=13%  Similarity=0.007  Sum_probs=24.3

Q ss_pred             cHHHHHHHHHHhccCCCCCCC-HHHHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPN-FREIHLFLQR   76 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps-~~~l~~~l~~   76 (86)
                      +..+.+++.+||..+|.+||+ +.++...+..
T Consensus       294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            467899999999999999995 5555554554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=80.25  E-value=0.15  Score=31.39  Aligned_cols=23  Identities=4%  Similarity=0.046  Sum_probs=19.6

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIH   71 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~   71 (86)
                      .++.++.+|+.+|+..+     |+.+++
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHH
Confidence            46788999999999976     888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-11
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-10
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-07
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-06
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.002

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 1e-11
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TLWE+ T+ +E P+   +  +++  I        +   LP+P +CP++I+++M +CW   
Sbjct: 203 TLWEMFTYGQE-PWIGLNGSQILHKIDK------EGERLPRPEDCPQDIYNVMVQCWAHK 255

Query: 61  DSDRPNFREIHLFLQR 76
             DRP F  +  FL  
Sbjct: 256 PEDRPTFVALRDFLLE 271

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 3e-11
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI ++   QPY   + + V+ ++   +        L  P NCP E+++LM  CW K 
Sbjct: 231 VLWEIFSYGL-QPYYGMAHEEVIYYVRDGNI-------LACPENCPLELYNLMRLCWSKL 282

Query: 61  DSDRPNFREIHLFLQR 76
            +DRP+F  IH  LQR
Sbjct: 283 PADRPSFCSIHRILQR 298

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (130), Expect = 5e-11
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE++++  E+PY D ++Q V+  I    R       LP P++CP  +  LM +CWQK 
Sbjct: 222 VMWEVMSY-GERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLDCWQKD 273

Query: 61  DSDRPNFREIHLFLQR 76
            + RP F +I   L +
Sbjct: 274 RNHRPKFGQIVNTLDK 289

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-10
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE  ++  ++PY       V   +    R       +  P  CP+E++DLM  CW   
Sbjct: 199 LMWEAFSY-GQKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYD 250

Query: 61  DSDRPNFREIHLFLQ 75
             +RP F  + L L+
Sbjct: 251 VENRPGFAAVELRLR 265

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-10
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WEI +  +  PYE F++    EHI+   R       L +P    ++++ +M  CW + 
Sbjct: 190 LMWEIYSLGK-MPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIMYSCWHEK 241

Query: 61  DSDRPNFREI 70
             +RP F+ +
Sbjct: 242 ADERPTFKIL 251

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-10
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE++TF   +PY+      +   +    R       LPQP  C  +++ +M +CW   
Sbjct: 202 TVWELMTF-GSKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMID 253

Query: 61  DSDRPNFREIHLFLQR 76
              RP FRE+ +   +
Sbjct: 254 ADSRPKFRELIIEFSK 269

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.4 bits (125), Expect = 2e-10
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T+    PY      +V E +        K   + +P  CP+++++LM  CWQ +
Sbjct: 205 LLWEIATY-GMSPYPGIDLSQVYELLE-------KDYRMERPEGCPEKVYELMRACWQWN 256

Query: 61  DSDRPNFREIHLFLQR 76
            SDRP+F EIH   + 
Sbjct: 257 PSDRPSFAEIHQAFET 272

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-10
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L E+ T  R  PY    ++ V++ +    R       +P P  CP+ + DLMC+CW+K 
Sbjct: 203 LLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKE 254

Query: 61  DSDRPNFREIHLFLQRKNLGYNPE 84
             +RP F  +  FL+       P+
Sbjct: 255 PEERPTFEYLQAFLEDYFTSTEPQ 278

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-10
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI +F R  PY     + VV  +    +       +  P  CP  ++++M  CW   
Sbjct: 189 LLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYEVMKNCWHLD 240

Query: 61  DSDRPNFREIHLFLQR 76
            + RP+F ++   L+ 
Sbjct: 241 AAMRPSFLQLREQLEH 256

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 3e-10
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T+WE L++  ++PY+      V+  I    R       +  P  CP E++ LM +CW   
Sbjct: 201 TMWEALSY-GQKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 252

Query: 61  DSDRPNFREIHLFLQ 75
             DRP+F  +   ++
Sbjct: 253 WEDRPDFLTVEQRMR 267

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 5e-10
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L+E++T   + PY + +++  +  +    R      +     NCPK +  LM EC +K 
Sbjct: 198 VLYELMT--GQLPYSNINNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 253

Query: 61  DSDRPNFREIHLFLQR 76
             +RP F +I   ++ 
Sbjct: 254 RDERPLFPQILASIEL 269

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 5e-10
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI++     PY   +   + E +    R       L +P+NC  E++DLM +CW++ 
Sbjct: 215 LLWEIVSL-GGTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREK 266

Query: 61  DSDRPNFREIHLFLQR 76
             +RP+F +I + L R
Sbjct: 267 PYERPSFAQILVSLNR 282

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 7e-10
 Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI +     PY           +            + QP    +EI+ +M  CW   
Sbjct: 255 LLWEIFSLGV-NPYPGIPVDANFYKLIQ------NGFKMDQPFYATEEIYIIMQSCWAFD 307

Query: 61  DSDRPNFREIHLFLQ 75
              RP+F  +  FL 
Sbjct: 308 SRKRPSFPNLTSFLG 322

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 8e-10
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE++T+  E+PY + S+  V++ I+   R       LP P++CP  I+ LM +CWQ+ 
Sbjct: 202 VMWEVMTY-GERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQE 253

Query: 61  DSDRPNFREIHLFLQR 76
            + RP F +I   L +
Sbjct: 254 RARRPKFADIVSILDK 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 9e-10
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L EI+T  R  PY   ++  V++++    R       + +P NCP+E++ LM  CW++ 
Sbjct: 199 LLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKER 250

Query: 61  DSDRPNFREIHLFLQ 75
             DRP F  +   L+
Sbjct: 251 PEDRPTFDYLRSVLE 265

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 9e-10
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE++T     PY D +   +  ++    R       L QP  CP  ++++M +CW   
Sbjct: 223 LLWELMTR-GAPPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPK 274

Query: 61  DSDRPNFREIHLFLQR 76
              RP+F E+   +  
Sbjct: 275 AEMRPSFSELVSRISA 290

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 1e-09
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WE+ +   + PYE+ S+  VVE IS   R       L +P      ++ +M  CW++ 
Sbjct: 191 LMWEVFSE-GKIPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWKER 242

Query: 61  DSDRPNFREIHLFLQR 76
             DRP F  +   L  
Sbjct: 243 PEDRPAFSRLLRQLAE 258

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +WEIL     +P++   +  V+  I +  R       LP P NCP  ++ LM +CW   
Sbjct: 198 CMWEILMHGV-KPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYD 249

Query: 61  DSDRPNFREIHLFLQR 76
            S RP F E+   L  
Sbjct: 250 PSRRPRFTELKAQLST 265

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 3e-09
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T     PY     + + + +    R       + +P NC  E++ +M +CW   
Sbjct: 226 LLWEIFTL-GGSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAV 277

Query: 61  DSDRPNFREIHLFLQR 76
            S RP F+++   L R
Sbjct: 278 PSQRPTFKQLVEDLDR 293

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 4e-09
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI T   EQPY+  S+++V+  +            L +P NCP  +F+LM  CWQ +
Sbjct: 224 VLWEIATL-AEQPYQGLSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYN 275

Query: 61  DSDRPNFREIHLFLQRK 77
              RP+F EI   ++ +
Sbjct: 276 PKMRPSFLEIISSIKEE 292

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 7e-09
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWE+ +           D +  + I        +   +  P + P E++D+M  CW   
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDAD 288

Query: 61  DSDRPNFREIHLFLQR 76
              RP F++I   +++
Sbjct: 289 PLKRPTFKQIVQLIEK 304

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 7e-08
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           TL E+     E P+ + +  RV+  I+     T     L QP        D + +C +K+
Sbjct: 204 TLIEMAE--IEPPHHELNPMRVLLKIAKSEPPT-----LAQPSRWSSNFKDFLKKCLEKN 256

Query: 61  DSDRPNFREI--HLFLQR 76
              R    ++  H F+  
Sbjct: 257 VDARWTTSQLLQHPFVTV 274

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 9e-08
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            LWEI +           D+     +   +R       +  P     E++  M +CW   
Sbjct: 225 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGE 277

Query: 61  DSDRPNFREIHLFLQR 76
            S RP F E+   L  
Sbjct: 278 PSQRPTFSELVEHLGN 293

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (101), Expect = 6e-07
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             +E L    + P+E  + Q   + I          +    P    +   DL+    + +
Sbjct: 193 LCYEFLV--GKPPFEANTYQETYKRI--------SRVEFTFPDFVTEGARDLISRLLKHN 242

Query: 61  DSDRPNFREI--HLFLQRKN 78
            S RP  RE+  H ++   +
Sbjct: 243 PSQRPMLREVLEHPWITANS 262

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 6e-07
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 11/76 (14%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L+E+       P+  FS + +   I               P     E+ +++       
Sbjct: 203 LLYELCA--LMPPFTAFSQKELAGKIREGKF-------RRIPYRYSDELNEIITRMLNLK 253

Query: 61  DSDRPNFREI--HLFL 74
           D  RP+  EI  +  +
Sbjct: 254 DYHRPSVEEILENPLI 269

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 7e-07
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 10/80 (12%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
           T  E+    R+ P  + +    + HI+             Q  +  +   + +  C QK 
Sbjct: 203 TCIELAE--RKPPLFNMNAMSALYHIAQ------NESPALQSGHWSEYFRNFVDSCLQKI 254

Query: 61  DSDRPNFREI--HLFLQRKN 78
             DRP    +  H F+ R+ 
Sbjct: 255 PQDRPTSEVLLKHRFVLRER 274

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 9e-07
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 9/78 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
              E++    E PY + +  R +  I+           L  P        D +  C    
Sbjct: 205 MAIEMIE--GEPPYLNENPLRALYLIATNGTPE-----LQNPEKLSAIFRDFLNRCLDMD 257

Query: 61  DSDRPNFREI--HLFLQR 76
              R + +E+  H FL+ 
Sbjct: 258 VEKRGSAKELLQHQFLKI 275

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 2e-06
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            + E+ T   E PY +  +   +     + R T+             E+ +++  C +++
Sbjct: 201 CMLEMAT--SEYPYSECQNAAQI-----YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253

Query: 61  DSDRPNFREI--HLFLQ 75
             +R + +++  H F Q
Sbjct: 254 KDERYSIKDLLNHAFFQ 270

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 7e-06
 Identities = 9/86 (10%), Positives = 22/86 (25%), Gaps = 4/86 (4%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L          P++        +     S       +       P E    +  C    
Sbjct: 202 VLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLR 259

Query: 61  DSDRPNFREIHLFLQR--KNLGYNPE 84
             D+P++  +    +      G++ +
Sbjct: 260 FDDKPDYSYLRQLFRNLFHRQGFSYD 285

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.8 bits (92), Expect = 7e-06
 Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)

Query: 1   TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
                L  +        +   +  E I    +ST    +       P+E +  M      
Sbjct: 202 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA---GFPEEFYKYMHYARNL 258

Query: 60  HDSDRPNFREIHLFLQR--KNLGYNPE 84
                P++  +     +  + L    +
Sbjct: 259 AFDATPDYDYLQGLFSKVLERLNTTED 285

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 9e-06
 Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 16/90 (17%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM--------------LPQPINCP 46
             WEI    R        D ++  +    S  + + +                 Q     
Sbjct: 207 VFWEIAR--RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 264

Query: 47  KEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
           + +  +M ECW  + + R     I   L +
Sbjct: 265 RVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            ++ +L+     P+   ++Q+++E+I +   +               E  D +     K 
Sbjct: 192 LVYVLLS--GINPFLAETNQQIIENIMNAEYT----FDEEAFKEISIEAMDFVDRLLVKE 245

Query: 61  DSDRPNFREI--HLFLQRK 77
              R    E   H +L++K
Sbjct: 246 RKSRMTASEALQHPWLKQK 264

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 8/78 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            ++ +L      P+       ++  I     S       P+  +    + DL+       
Sbjct: 204 IMYTLLA--GSPPFWHRKQMLMLRMI----MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 257

Query: 61  DSDRPNFREI--HLFLQR 76
              R    E   H F Q+
Sbjct: 258 PQKRYTAEEALAHPFFQQ 275

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            ++ +L      P+       +   +    R        P+     +E+  L+    +  
Sbjct: 202 IMYILLC--GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 259

Query: 61  DSDRPNFREI--HLFLQR 76
            + R    E   H ++ +
Sbjct: 260 PTQRMTITEFMNHPWIMQ 277

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 5e-05
 Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 8/80 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             + +L+     P+   + Q  + ++S  +             N      D +     K 
Sbjct: 205 ITYILLS--GASPFLGDTKQETLANVSAVNYE----FEDEYFSNTSALAKDFIRRLLVKD 258

Query: 61  DSDRPNFREI--HLFLQRKN 78
              R   ++   H +++ K+
Sbjct: 259 PKKRMTIQDSLQHPWIKPKD 278

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 5e-05
 Identities = 10/78 (12%), Positives = 19/78 (24%), Gaps = 9/78 (11%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L  +L           S Q   +          K   L            L+ +   ++
Sbjct: 195 VLTAMLAGELPWDQPSDSCQEYSDWKE-------KKTYLNPWKKIDSAPLALLHKILVEN 247

Query: 61  DSDRPNFREI--HLFLQR 76
            S R    +I    +  +
Sbjct: 248 PSARITIPDIKKDRWYNK 265

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.3 bits (86), Expect = 6e-05
 Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 8/77 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             + +L      P+ D +D ++ E I             P   +      D +    +K 
Sbjct: 198 IAYILLC--GYPPFYDENDAKLFEQI----LKAEYEFDSPYWDDISDSAKDFIRHLMEKD 251

Query: 61  DSDRPNFREI--HLFLQ 75
              R    +   H ++ 
Sbjct: 252 PEKRFTCEQALQHPWIA 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 37.0 bits (85), Expect = 8e-05
 Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 8/80 (10%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             + +L+     P+    D   ++++    +            +   E  D +    QK 
Sbjct: 217 LGYVLLS--GLSPFAGEDDLETLQNV----KRCDWEFDEDAFSSVSPEAKDFIKNLLQKE 270

Query: 61  DSDRPNFREI--HLFLQRKN 78
              R    +   H +L+  +
Sbjct: 271 PRKRLTVHDALEHPWLKGDH 290

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 37.0 bits (85), Expect = 8e-05
 Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 8/81 (9%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
             + +L+     P+   +D   + ++    +S   ++         ++  D + +     
Sbjct: 214 LSYILLS--GLSPFGGENDDETLRNV----KSCDWNMDDSAFSGISEDGKDFIRKLLLAD 267

Query: 61  DSDRPNFREI--HLFLQRKNL 79
            + R    +   H +L   N 
Sbjct: 268 PNTRMTIHQALEHPWLTPGNA 288

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 8e-04
 Identities = 8/78 (10%), Positives = 25/78 (32%), Gaps = 10/78 (12%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            +++++      P+   ++  + + I          +    P     +  DL+ +     
Sbjct: 199 IIYQLVA--GLPPFRAGNEYLIFQKI--------IKLEYDFPEKFFPKARDLVEKLLVLD 248

Query: 61  DSDRPNFREIHLFLQRKN 78
            + R    E+  +   K 
Sbjct: 249 ATKRLGCEEMEGYGPLKA 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.002
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 10/69 (14%)

Query: 1   TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
            L+E+L    + P+    ++ +   I        +      P    KE  DL+ + + + 
Sbjct: 192 LLYEMLI--GQSPFHGQDEEELFHSI--------RMDNPFYPRWLEKEAKDLLVKLFVRE 241

Query: 61  DSDRPNFRE 69
              R   R 
Sbjct: 242 PEKRLGVRG 250

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.62
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.62
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.62
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.61
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.6
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.58
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.58
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.57
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.55
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.55
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.53
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.53
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.52
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.52
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.52
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.48
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.48
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.46
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.43
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.38
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.29
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.17
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.13
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.13
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.08
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.06
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.05
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.03
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.02
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.89
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	98.88
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.87
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.82
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.8
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.78
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.78
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.77
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.76
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.74
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.72
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.69
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.68
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.66
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.66
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.65
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.65
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.57
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.54
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.43
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.36
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.35
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.33
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.25
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.24
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.24
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.76
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.89

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-16  Score=97.60  Aligned_cols=70  Identities=30%  Similarity=0.722  Sum_probs=61.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++.| +.||.+.+..++...+..|.+       ++.|+.+|.++++++.+||..+|++||+|.+|.+.|+...
T Consensus       201 ~l~E~lt~G-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         201 TMWEALSYG-QKPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             HHHHHHTTS-CCTTTTCCTHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            479999877 799999988888888887765       6778899999999999999999999999999999888643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.4e-16  Score=96.21  Aligned_cols=69  Identities=28%  Similarity=0.678  Sum_probs=61.3

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||+++| +.||.+.+..++...+.++.+       ++.|..++.++.+++.+||..+|++||||.+++++|.++
T Consensus       190 ~l~el~t~g-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         190 LMWEIYSLG-KMPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHTTS-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             hhHhHHhcC-CCCCCCCCHHHHHHHHHhCCC-------CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            479999877 799999999889888887665       677889999999999999999999999999999998653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.6e-16  Score=95.13  Aligned_cols=69  Identities=29%  Similarity=0.737  Sum_probs=61.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++.| +.||.+.+..++...+.++.+       ++.|..+|.++.+++.+||..+|++||||.+|...|+.+
T Consensus       199 ~l~ellt~g-~~Pf~~~~~~~~~~~i~~~~~-------~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         199 LMWEAFSYG-QKPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             hhhHHhhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            479999877 799999998888888887665       777889999999999999999999999999998888764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=4.2e-16  Score=95.69  Aligned_cols=71  Identities=37%  Similarity=0.846  Sum_probs=63.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||+|+| +.||.+.+..+++..+..+.+       ++.|..++.++.+++.+||..+|++||+|.+|+..|+++..
T Consensus       222 vl~el~t~g-~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         222 VMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            479999877 799999998888888887655       66788899999999999999999999999999999998754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.7e-16  Score=95.69  Aligned_cols=76  Identities=32%  Similarity=0.672  Sum_probs=65.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.+ ..||.+.+..+++..+.++.+       ++.|..++.++.+++.+||..+|++|||+.+++++|+++...
T Consensus       215 il~ell~~~-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         215 LLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHGGGTCC-------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHhcCC-------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            479999855 578999999998888887665       777888999999999999999999999999999999998766


Q ss_pred             CCCC
Q psy10555         81 YNPE   84 (86)
Q Consensus        81 ~~~~   84 (86)
                      .+..
T Consensus       287 ~~~~  290 (309)
T d1fvra_         287 RKTY  290 (309)
T ss_dssp             SSCS
T ss_pred             CcCC
Confidence            5543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.7e-16  Score=95.12  Aligned_cols=71  Identities=27%  Similarity=0.639  Sum_probs=63.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| +.||...+..+++..+..+.+       ++.|..++.++.+++.+||..||.+||||.++++.|+.+.+
T Consensus       189 il~el~t~~-~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         189 LLWEIYSFG-RVPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHHHHHTTS-CCSCTTSCGGGHHHHHTTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            479999877 799998888888888887665       77788899999999999999999999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=9.6e-16  Score=93.95  Aligned_cols=70  Identities=40%  Similarity=0.777  Sum_probs=61.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++.+ ..||.+.+..+++..+..+.+       ++.|..++.++.+++.+||..+|++||||.+|.+.|+++.
T Consensus       231 vl~ell~~~-~~p~~~~~~~e~~~~v~~~~~-------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         231 VLWEIFSYG-LQPYYGMAHEEVIYYVRDGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHTTT-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hHHHHHccC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            479999854 578999999998888887655       6678889999999999999999999999999999999885

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1e-15  Score=92.38  Aligned_cols=71  Identities=31%  Similarity=0.594  Sum_probs=61.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||...+..+++..+..+.+       +..|..++.++.+++.+||..+|++||||.+++++|+++..
T Consensus       191 il~el~t~~-~~~~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         191 LMWEVFSEG-KIPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHTTS-CCTTCSCCHHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHhcCC-------CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            479999977 688888888888888887655       66688899999999999999999999999999999998753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.6e-16  Score=93.52  Aligned_cols=71  Identities=34%  Similarity=0.728  Sum_probs=62.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| ..||.+.+..+++..+..+.+       ++.|+.++.++.+++.+||..+|++|||+.+|+..|+++..
T Consensus       198 il~e~lt~g-~~P~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         198 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHTTS-CCTTTTCCGGGHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-CCCCCCCCHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            479999877 799999988888888887655       67788999999999999999999999999999999998743

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.9e-15  Score=90.59  Aligned_cols=71  Identities=37%  Similarity=0.870  Sum_probs=60.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.+ .+||.+.+..+++..+..+.+       ++.|..++.++.+++.+||..+|++||+|.+|+..|+++..
T Consensus       202 il~el~t~~-~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         202 VMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTTCC-------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCccccCCHHHHHHHHhccCC-------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            479999866 567777888888888877655       67788899999999999999999999999999999987643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.3e-15  Score=90.69  Aligned_cols=70  Identities=31%  Similarity=0.835  Sum_probs=59.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||+++| +.||.+.+..++...+...      +.+++.+..++.++.+++.+||..+|++||||.+|.+.|.+.
T Consensus       203 il~emlt~G-~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         203 TLWEMFTYG-QEPWIGLNGSQILHKIDKE------GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHTTS-CCTTTTCCHHHHHHHHHTS------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCcCHHHHHHHHHhC------CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            479999877 7999999988888777642      233677788999999999999999999999999999988764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.7e-15  Score=92.54  Aligned_cols=70  Identities=30%  Similarity=0.760  Sum_probs=61.5

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||+|.| +.||.+.+..++...+..+.+       ++.|+.++.++.+++.+||..+|.+||||.+|+.+|+.+.
T Consensus       202 il~el~t~g-~~p~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         202 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHHHTTS-CCTTTTSCGGGHHHHHHHTCC-------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            479999877 799999888888888877665       6778899999999999999999999999999999988764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=5e-15  Score=90.69  Aligned_cols=70  Identities=30%  Similarity=0.672  Sum_probs=61.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++.| ..||.+.+..++...+..+.+       ++.|..++.++.+++.+||+.+|.+|||+.++++.|+++.
T Consensus       226 vl~ell~~g-~~p~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         226 LLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHTTCC-------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhccCC-CCCCCCCCHHHHHHHHHcCCC-------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            479999877 799999988888877776654       6778889999999999999999999999999999999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.8e-15  Score=91.15  Aligned_cols=69  Identities=41%  Similarity=0.773  Sum_probs=61.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++++ ..||.+.+..+++..+..+.+       ++.|..++..+.++|.+||+.+|++|||+.+|++.|++.
T Consensus       224 il~El~t~~-~~p~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         224 VLWEIATLA-EQPYQGLSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHHHHHTS-CCTTTTSCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhCCC-------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            479999955 699999999998888877655       777889999999999999999999999999999998875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.3e-15  Score=92.15  Aligned_cols=75  Identities=27%  Similarity=0.554  Sum_probs=57.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++++ .+|+...+..++...+..|.+       +..|..++.++.+++.+||..+|++||++.+|+++|+++.+.
T Consensus       223 vl~El~t~~-~p~~~~~~~~~~~~~i~~g~~-------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         223 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHHHTTS-CCSCC------CHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCC-CCCCCCCCHHHHHHHHHcCCC-------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            479999955 344445566667777777665       667888999999999999999999999999999999998777


Q ss_pred             CCC
Q psy10555         81 YNP   83 (86)
Q Consensus        81 ~~~   83 (86)
                      +..
T Consensus       295 ~~~  297 (311)
T d1r0pa_         295 FIG  297 (311)
T ss_dssp             CCS
T ss_pred             hhh
Confidence            543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=6.9e-15  Score=89.08  Aligned_cols=71  Identities=31%  Similarity=0.640  Sum_probs=60.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| .+||...+..+++..+..+.+       +..|..++.++.+++.+||..+|++||||.+|++.|+.+.+
T Consensus       199 vl~ellt~~-~~~~~~~~~~~~~~~i~~~~~-------~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         199 LLTEIVTHG-RIPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhcCC-------CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            479999966 577777888888888877655       66788899999999999999999999999999999998654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.1e-14  Score=88.57  Aligned_cols=76  Identities=25%  Similarity=0.451  Sum_probs=58.6

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++  |+.||.+.+.. .+...+..+...   +.....+..++.++.+++.+||..+|++||||.+|+..|+.+..
T Consensus       198 ~l~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         198 VLYELMT--GQLPYSNINNRDQIIFMVGRGYLS---PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHHHHHH--SSCTTTTCCCHHHHHHHHHHTSCC---CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHH--CCCCCCCCChHHHHHHHHhcCCCC---CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            4799999  78999987654 455555555431   11123456789999999999999999999999999999999876


Q ss_pred             CC
Q psy10555         80 GY   81 (86)
Q Consensus        80 ~~   81 (86)
                      ..
T Consensus       273 ~~  274 (276)
T d1uwha_         273 SL  274 (276)
T ss_dssp             TC
T ss_pred             cC
Confidence            54

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.3e-14  Score=89.67  Aligned_cols=68  Identities=28%  Similarity=0.593  Sum_probs=55.2

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQR   76 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~   76 (86)
                      ++|||++.| +.||.+.+..+ +...+..+.+       ++.|..++.++.+||.+||..+|++||||.+|+++|..
T Consensus       255 il~emlt~g-~~Pf~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         255 LLWEIFSLG-VNPYPGIPVDANFYKLIQNGFK-------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHTTTS-CCSSTTCCCSHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhcCCC-------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            479999877 79999876544 4444444433       77788999999999999999999999999999999863

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.5e-14  Score=87.28  Aligned_cols=74  Identities=31%  Similarity=0.699  Sum_probs=61.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.| .+||.+....+++..+..+.+       .+.+..++.++.+++.+||..+|++||++.+|+..|+.....
T Consensus       203 il~el~t~~-~p~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         203 LLTELTTKG-RVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHTTT-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhcCC-------CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            479999866 577777888888888877655       667889999999999999999999999999999999986554


Q ss_pred             CC
Q psy10555         81 YN   82 (86)
Q Consensus        81 ~~   82 (86)
                      ..
T Consensus       275 ~~  276 (285)
T d1fmka3         275 TE  276 (285)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=4.4e-14  Score=86.14  Aligned_cols=72  Identities=36%  Similarity=0.720  Sum_probs=59.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhcC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNLG   80 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~~   80 (86)
                      ++|||++.+ .+||.+.+..++...+..+.+       ++.|..++.++.+++.+||..+|++|||+.+++..|+.+...
T Consensus       205 ~l~ell~~~-~p~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         205 LLWEIATYG-MSPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHHTTS-CCSSTTCCHHHHHHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHHHhCC-CCCCCcchHHHHHHHHhcCCC-------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            479999855 466667777777777766554       677888999999999999999999999999999999887543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=6.4e-14  Score=85.48  Aligned_cols=70  Identities=27%  Similarity=0.598  Sum_probs=57.3

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhh
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKN   78 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~   78 (86)
                      ++|||++.+ ..||.+.+ ...+...+..+.+       +..|..++.++.+++.+||..+|++|||+.+++++|+.+.
T Consensus       225 il~ellt~~-~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         225 LLWEIFSLG-ASPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHHTTS-CCSSTTCCCSHHHHHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhcCCC-------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            479999855 67898865 3445556666554       6778889999999999999999999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.1e-13  Score=83.80  Aligned_cols=71  Identities=25%  Similarity=0.625  Sum_probs=55.9

Q ss_pred             CEeceeecCCCCCCCCCCHHH-HHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQR-VVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~-i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      ++|||++.| .+||.+.+... +...+..+.+       +..|..++.++.+|+.+||..+|++||||.+|+..|+++..
T Consensus       236 ~l~ellt~g-~p~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         236 FLWELFSLG-SSPYPGMPVDSKFYKMIKEGFR-------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             HHHHHHTTT-CCSSTTCCSSHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-CCCCCCCCHHHHHHHHHhcCCC-------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            479999866 67777766544 4444455444       66678899999999999999999999999999999987543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.8e-13  Score=80.21  Aligned_cols=64  Identities=20%  Similarity=0.303  Sum_probs=55.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..++...+..+..       ...|..++.++.+++.+||..||.+|||+.+++++
T Consensus       203 ilyel~t--g~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         203 LLYELCA--LMPPFTAFSQKELAGKIREGKF-------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHcCCC-------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            4789999  7899999998888888877543       45577899999999999999999999999999763

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.5e-12  Score=75.64  Aligned_cols=63  Identities=24%  Similarity=0.335  Sum_probs=53.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+.++.        ...|..++.++.+++.+||..||++|||+.+++++
T Consensus       193 ilyell~--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         193 LCYEFLV--GKPPFEANTYQETYKRISRVE--------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHTTC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHHHhc--CCCCCCCCCHHHHHHHHHcCC--------CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            4789999  789999988888887776542        45577899999999999999999999999999873

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=5.9e-12  Score=76.55  Aligned_cols=75  Identities=11%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++||+++  |+.||...........+...............+..+|.++.+++..||..+|++||++.++.+.|+.+
T Consensus       202 ~l~el~t--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         202 VLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHH--SSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            4789999  78999886654433322221110000000112357899999999999999999999999998888874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=5.7e-12  Score=76.74  Aligned_cols=66  Identities=23%  Similarity=0.299  Sum_probs=53.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+..     .....|..++.++.+|+.+||..||.+|||+.+++++
T Consensus       204 ilyemlt--g~~Pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         204 TLIEMAE--IEPPHHELNPMRVLLKIAKSEP-----PTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHHH--SSCTTTTSCGGGHHHHHHHSCC-----CCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHcCCC-----CCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  7899999888777777766432     1234456789999999999999999999999999774

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.08  E-value=1.9e-11  Score=75.09  Aligned_cols=65  Identities=20%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+.+..+..+..      ....+..++.++.+++.+||..||.+|||+.+++++
T Consensus       203 ilyel~~--g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         203 TCIELAE--RKPPLFNMNAMSALYHIAQNES------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHSCC------CCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHhCCC------CCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            4789999  7899999888777777766433      122345689999999999999999999999999763

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.1e-11  Score=73.65  Aligned_cols=66  Identities=18%  Similarity=0.224  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+.+..+..+..     .....|..++.++.+++.+||..||++|||+.+++++
T Consensus       205 ilyemlt--G~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         205 MAIEMIE--GEPPYLNENPLRALYLIATNGT-----PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HHHHHHH--SSCTTTTSCHHHHHHHHHHHCS-----CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             HHHHHhh--CCCCCCCCCHHHHHHHHHhCCC-----CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  7899999887766666554322     1234456789999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.7e-11  Score=74.08  Aligned_cols=65  Identities=12%  Similarity=0.267  Sum_probs=50.1

Q ss_pred             CEeceeecCCCCCCCCCC-HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~-~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.. ..++...+..+..      ....+..+++++.+++.+||..+|++|||+.+++++
T Consensus       201 ilyel~~--g~~Pf~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         201 CMLEMAT--SEYPYSECQNAAQIYRRVTSGVK------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             HHHHHHH--SSCTTTTCSSHHHHHHHHTTTCC------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCcccHHHHHHHHHcCCC------CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            4789999  789998754 4556666665433      122345678999999999999999999999999863

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.03  E-value=8.1e-11  Score=72.12  Aligned_cols=67  Identities=15%  Similarity=0.131  Sum_probs=53.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..++...+..+...    ...+.+..++.++.+++.+||..||++|||+.+++++
T Consensus       198 ilyell~--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         198 IAYILLC--GYPPFYDENDAKLFEQILKAEYE----FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHTTCCC----CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHhccCCC----CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            4789999  78999998888888777765431    1122345789999999999999999999999999874

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.02  E-value=1.3e-10  Score=69.92  Aligned_cols=73  Identities=18%  Similarity=0.129  Sum_probs=55.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHhhc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-NFREIHLFLQRKNL   79 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-s~~~l~~~l~~~~~   79 (86)
                      ++|||++  |..||.+.+..++...+..+..    .........+|.++.+++.+||..||.+|| ++.++...|.++.+
T Consensus       203 ilyellt--G~~Pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         203 VLYEVLT--GEPPFTGDSPVSVAYQHVREDP----IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHCCC----CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             HHHHHHh--CCCCCCCcCHHHHHHHHHhcCC----CCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence            4789999  7899999887776665554321    001122357899999999999999999999 89999998888754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=3.4e-11  Score=73.19  Aligned_cols=67  Identities=12%  Similarity=0.091  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+...    .....++.++.++.+++.+||..||.+|||+.+++++
T Consensus       205 ilyell~--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         205 ITYILLS--GASPFLGDTKQETLANVSAVNYE----FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHTTCCC----CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHc--CCCCCCCCCHHHHHHHHHhcCCC----CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  78999999888888877764321    0011235788999999999999999999999999874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.95  E-value=9.5e-11  Score=70.91  Aligned_cols=67  Identities=12%  Similarity=0.103  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+...+...+..+...    ...+..+.+++++.+++.+||..+|.+||++.+++.+
T Consensus       204 ilyeml~--g~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         204 IMYTLLA--GSPPFWHRKQMLMLRMIMSGNYQ----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             hhhhhcc--CCCCCCCCCHHHHHHHHHhCCCC----CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            4789999  68999999888888777765321    1122234789999999999999999999999998764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=5.6e-11  Score=72.33  Aligned_cols=62  Identities=11%  Similarity=0.167  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~   72 (86)
                      ++|||++  |+.||.+.+..++...+.++.        ...|..++.++.+|+.+||..||.+|||+.++..
T Consensus       199 ilyell~--g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         199 IIYQLVA--GLPPFRAGNEYLIFQKIIKLE--------YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHTTC--------CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHHHhh--CCCCCCCcCHHHHHHHHHcCC--------CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            4789999  789999988888888776542        4567789999999999999999999999998643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.89  E-value=2.8e-10  Score=70.90  Aligned_cols=67  Identities=12%  Similarity=0.110  Sum_probs=53.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+..    ......+..++.++.+|+.+||..||.+|||+.+++.+
T Consensus       217 ilyellt--G~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         217 LGYVLLS--GLSPFAGEDDLETLQNVKRCDW----EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHHHH--SCCSSCCSSHHHHHHHHHHCCC----CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC----CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  7899999988888877776432    01122235789999999999999999999999999874

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=9.1e-11  Score=72.26  Aligned_cols=62  Identities=21%  Similarity=0.315  Sum_probs=52.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHH-HHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR-EIHL   72 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~-~l~~   72 (86)
                      ++|||++  |+.||.+.+..++...+..+.        +..|..++.++.+++.+||..||.+||++. +++.
T Consensus       192 ilyemlt--G~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         192 LLYEMLI--GQSPFHGQDEEELFHSIRMDN--------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHcCC--------CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            4799999  789999999888887776532        456778999999999999999999999995 6754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.87  E-value=3.4e-10  Score=70.43  Aligned_cols=67  Identities=7%  Similarity=0.072  Sum_probs=52.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+...    ........++.++.+|+.+||..||++|||+.+++.+
T Consensus       214 ilyell~--G~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         214 LSYILLS--GLSPFGGENDDETLRNVKSCDWN----MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHTCCC----SCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCCC----CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  78999998888888777664320    0111124578999999999999999999999999885

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.82  E-value=4e-10  Score=68.37  Aligned_cols=75  Identities=12%  Similarity=0.184  Sum_probs=52.6

Q ss_pred             CEeceeecCCCCCCCCCC---HHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFS---DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK   77 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~---~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~   77 (86)
                      ++|||++  |+.||.+..   .......+......   ......+..+|.++.+++..||..+|++||+++.+...|+++
T Consensus       202 ~l~ellt--g~~Pf~~~~~~~~~~~~~~i~~~~~~---~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         202 VFMYFLR--GSLPWQGLKAATNKQKYERIGEKKQS---TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHHHH--SSCTTSSCCSCCHHHHHHHHHHHHHH---SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CCCcCCCccchhHHHHHHHHHhccCC---CChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            4789999  789998643   33344444433221   000112357899999999999999999999999999988876


Q ss_pred             hcC
Q psy10555         78 NLG   80 (86)
Q Consensus        78 ~~~   80 (86)
                      ...
T Consensus       277 ~~~  279 (293)
T d1csna_         277 LER  279 (293)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.5e-09  Score=67.43  Aligned_cols=63  Identities=16%  Similarity=0.185  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |..||.+.+...++..+..+.        +..|..++.++.+++.+|+..||.+|+     ++.+++++
T Consensus       227 ilyemlt--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         227 LIYEMAA--GYPPFFADQPIQIYEKIVSGK--------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             HHHHHHh--CCCCCCCcCHHHHHHHHhcCC--------CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence            4789999  789999988888888777643        455778999999999999999999994     89999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=9.3e-10  Score=67.66  Aligned_cols=65  Identities=15%  Similarity=0.180  Sum_probs=52.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCC--CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLP--QPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~--~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+..+++..+..+..      ..+  .++.++.++.+++.+|+..||.+|||+.+++++
T Consensus       192 ily~ll~--G~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         192 LVYVLLS--GINPFLAETNQQIIENIMNAEY------TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHTCC------CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhCCC------CCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4789999  7899999998888888876432      111  124688999999999999999999999999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.78  E-value=2.1e-09  Score=65.98  Aligned_cols=63  Identities=19%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRP-----NFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rp-----s~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..+++..+..+.        ...|+.++.++.+++.+|+..+|.+|+     ++.+++++
T Consensus       190 ilyemlt--G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         190 LIYEMLA--GYTPFYDSNTMKTYEKILNAE--------LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HHHHHHH--SSCTTCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             hHHHHHh--CCCCCCCcCHHHHHHHHHcCC--------CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            4789999  789999999888888877643        355678999999999999999999996     89998764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.9e-09  Score=65.89  Aligned_cols=63  Identities=17%  Similarity=0.262  Sum_probs=53.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+..++...+..+.        +..|..++.++.+|+.+|+..||.+|++     +.+++++
T Consensus       194 ilyeml~--G~~pf~~~~~~~~~~~i~~~~--------~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         194 VMYEMMC--GRLPFYNQDHERLFELILMEE--------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHCC--------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HHHHHHH--CCCCCCCcCHHHHHHHHhcCC--------CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            4789999  789999999888877776542        4567889999999999999999999995     7888774

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3e-09  Score=64.41  Aligned_cols=75  Identities=13%  Similarity=0.065  Sum_probs=51.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh-cc------------------ccCCCCCCCCCcHHHHHHHHHHhccCC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS-TA------------------KHIMLPQPINCPKEIFDLMCECWQKHD   61 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~-~~------------------~~~~~~~p~~~~~~l~~l~~~Cw~~~p   61 (86)
                      ++|||++  |+.||.+.+..+.+..+.+.... ..                  .......+...+..+.+|+.+|+..||
T Consensus       204 il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP  281 (305)
T d1blxa_         204 IFAEMFR--RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  281 (305)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSST
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCCh
Confidence            4789999  78999998877666655432100 00                  000011234578899999999999999


Q ss_pred             CCCCCHHHHHHH--HHHh
Q psy10555         62 SDRPNFREIHLF--LQRK   77 (86)
Q Consensus        62 ~~Rps~~~l~~~--l~~~   77 (86)
                      .+|||+.+++++  |+.+
T Consensus       282 ~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         282 AKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TTSCCHHHHHTSGGGTTC
T ss_pred             hHCcCHHHHhcChhhcCc
Confidence            999999999875  4444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=6.3e-10  Score=67.88  Aligned_cols=34  Identities=21%  Similarity=0.348  Sum_probs=30.6

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHhhc
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLFLQRKNL   79 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~l~~~~~   79 (86)
                      +..+.+++.+||..||++||||.+|+..|+++..
T Consensus       264 ~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         264 LRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999998754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.2e-09  Score=65.90  Aligned_cols=65  Identities=17%  Similarity=0.134  Sum_probs=45.7

Q ss_pred             CEeceeecCCCCCCCCCCHH-HHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQ-RVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~-~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||...+.. .....+.....      .......++.++.+++.+||..||.+|||+.+++++
T Consensus       195 ilyeml~--G~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         195 VLTAMLA--GELPWDQPSDSCQEYSDWKEKKT------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             HHHHHHH--SSCSCSSSSTTSHHHHHHHTTCT------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHh--CCCCCCCCChHHHHHHHHhcCCC------CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            4789999  78999775432 22222222111      122235678999999999999999999999999764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.69  E-value=8e-09  Score=62.10  Aligned_cols=71  Identities=8%  Similarity=0.034  Sum_probs=48.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhc-c-------c-------------cCCCCCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRST-A-------K-------------HIMLPQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~-~-------~-------------~~~~~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||.+.+..+.+..+....-.. .       .             ......+..++.++.+++.+|+..
T Consensus       190 ~l~el~~--G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~  267 (286)
T d1ob3a_         190 IFAEMVN--GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKL  267 (286)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHH--CCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccC
Confidence            4789998  789999888766555543211000 0       0             000011245678999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy10555         60 HDSDRPNFREIHLF   73 (86)
Q Consensus        60 ~p~~Rps~~~l~~~   73 (86)
                      ||++|||+.+++++
T Consensus       268 dP~~R~s~~ell~H  281 (286)
T d1ob3a_         268 DPNQRITAKQALEH  281 (286)
T ss_dssp             STTTSCCHHHHHTS
T ss_pred             ChhHCcCHHHHhcC
Confidence            99999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=8.8e-09  Score=62.32  Aligned_cols=71  Identities=14%  Similarity=0.039  Sum_probs=49.0

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcccc---------------CCCCC-----CCCCcHHHHHHHHHHhccC
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKH---------------IMLPQ-----PINCPKEIFDLMCECWQKH   60 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~---------------~~~~~-----p~~~~~~l~~l~~~Cw~~~   60 (86)
                      ++|||++  |..||.+.+..+.+..+.+........               .....     .+..+.++.+|+.+|+..|
T Consensus       190 il~el~~--g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~d  267 (299)
T d1ua2a_         190 ILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN  267 (299)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHh--CcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCC
Confidence            4789999  789999888777666655421100000               00000     1246789999999999999


Q ss_pred             CCCCCCHHHHHHH
Q psy10555         61 DSDRPNFREIHLF   73 (86)
Q Consensus        61 p~~Rps~~~l~~~   73 (86)
                      |++|||+.+++++
T Consensus       268 P~~R~sa~e~L~H  280 (299)
T d1ua2a_         268 PCARITATQALKM  280 (299)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             hhhCcCHHHHhCC
Confidence            9999999999874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=4.2e-09  Score=63.24  Aligned_cols=57  Identities=25%  Similarity=0.353  Sum_probs=44.7

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |+.||.+.  .+    +..+.        ...+..++.++.+++.+||..||++|||+.+++++
T Consensus       199 ilyell~--g~~Pf~~~--~~----i~~~~--------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         199 LLYDMVC--GDIPFEHD--EE----IIRGQ--------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             HHHHHHH--SSCSCCSH--HH----HHHCC--------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             eehhHhh--CCCCCCCc--hH----Hhhcc--------cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            4789999  78999753  22    22322        34567899999999999999999999999999874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=7.7e-10  Score=68.41  Aligned_cols=69  Identities=13%  Similarity=0.189  Sum_probs=43.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQP--INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p--~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ++|||++  |..||.+.+.......+......  .....+.+  ..++.++.+|+.+|+..||++|||+.+++.+
T Consensus       202 ily~llt--g~~Pf~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         202 IMYILLC--GYPPFYSNHGLAISPGMKTRIRM--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             HHHHHTT--SSCSCEETTCC--------CCCS--CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hHHHHhh--CCCCCCCCCHHHHHHHHHHHHhc--CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            4789998  78999876544333333221110  01111111  3578899999999999999999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.65  E-value=4.6e-09  Score=65.54  Aligned_cols=66  Identities=15%  Similarity=0.175  Sum_probs=46.4

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      ++|||++  |+.||.+.+............     ......|..++.++.+++.+||..||.+||+     +.+++.+
T Consensus       195 ilyemlt--G~~Pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         195 MLFKLLR--GHSPFRQHKTKDKHEIDRMTL-----TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HHHHHHH--SSCSSCSSCSSCHHHHHHHSS-----SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHhcc-----cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            4789999  789998754322222111111     1124456789999999999999999999999     6888764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2e-09  Score=66.16  Aligned_cols=67  Identities=21%  Similarity=0.196  Sum_probs=48.8

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPN-----FREIHLF   73 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~p~~~~~~l~~l~~~Cw~~~p~~Rps-----~~~l~~~   73 (86)
                      +||||++  |+.||.+.+..+....+.++...    ..++.|..++.++.+++.+||..||.+|++     +.+++.+
T Consensus       221 iLyellt--G~~PF~~~~~~~~~~~i~~~~~~----~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         221 LMYELLT--GASPFTVDGEKNSQAEISRRILK----SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             HHHHHHH--SSCTTSCTTSCCCHHHHHHHHHH----CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhccc----CCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            4789999  78999876544333444433221    124557789999999999999999999995     7888763

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=2.2e-08  Score=60.57  Aligned_cols=77  Identities=10%  Similarity=-0.006  Sum_probs=50.9

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcccc----------CCCCC-----------CCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKH----------IMLPQ-----------PINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~----------~~~~~-----------p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||.+.+....+..+..........          .....           ...++.++.+++.+|+..
T Consensus       192 ily~m~~--G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~  269 (298)
T d1gz8a_         192 IFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHY  269 (298)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCS
T ss_pred             hhhHHhh--CCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccC
Confidence            4689999  689999888766555543321100000          00000           024568899999999999


Q ss_pred             CCCCCCCHHHHHHH--HHHhhc
Q psy10555         60 HDSDRPNFREIHLF--LQRKNL   79 (86)
Q Consensus        60 ~p~~Rps~~~l~~~--l~~~~~   79 (86)
                      ||++|||+.+++++  |+.+..
T Consensus       270 dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         270 DPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             STTTSCCHHHHHTSGGGTTCCC
T ss_pred             ChhHCcCHHHHhCCHhhccCCC
Confidence            99999999999986  555533

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=4.8e-08  Score=59.35  Aligned_cols=71  Identities=14%  Similarity=0.076  Sum_probs=46.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhccccCCCCC---------------C---------CCCcHHHHHHHHHH
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQ---------------P---------INCPKEIFDLMCEC   56 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~~~~~~~~---------------p---------~~~~~~l~~l~~~C   56 (86)
                      ++|||++  |+.||.+.+.......+.+.............               +         ...+.++.+|+.+|
T Consensus       211 il~el~~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~m  288 (318)
T d3blha1         211 IMAEMWT--RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKL  288 (318)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHH
T ss_pred             eeeeHhh--CCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHH
Confidence            4789999  78999988776665555442210000000000               0         01255678899999


Q ss_pred             hccCCCCCCCHHHHHHH
Q psy10555         57 WQKHDSDRPNFREIHLF   73 (86)
Q Consensus        57 w~~~p~~Rps~~~l~~~   73 (86)
                      +..||++|||+.+++++
T Consensus       289 L~~dP~~R~sa~elL~H  305 (318)
T d3blha1         289 LVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             SCSSTTTSCCHHHHHHS
T ss_pred             CcCChhHCcCHHHHHcC
Confidence            99999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=9.5e-08  Score=58.71  Aligned_cols=75  Identities=11%  Similarity=0.080  Sum_probs=49.1

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhh-------------------c----cccCCCCCCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRS-------------------T----AKHIMLPQPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~-------------------~----~~~~~~~~p~~~~~~l~~l~~~Cw   57 (86)
                      ++|||++  |..||.+.+....+..+......                   .    ...........++.++.+|+.+|+
T Consensus       208 il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (346)
T d1cm8a_         208 IMAEMIT--GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  285 (346)
T ss_dssp             HHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             HHHHHHH--CcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHC
Confidence            4688998  78999887765544333221100                   0    000001112456789999999999


Q ss_pred             ccCCCCCCCHHHHHHH--HHHh
Q psy10555         58 QKHDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~--l~~~   77 (86)
                      ..||.+|||+.+++++  |+.+
T Consensus       286 ~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         286 VLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             CSSTTTSCCHHHHHHSGGGTTT
T ss_pred             cCChhHCcCHHHHhcChhhCcC
Confidence            9999999999999986  5443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=8.2e-08  Score=58.90  Aligned_cols=71  Identities=11%  Similarity=0.055  Sum_probs=47.6

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhhhcc-----------------ccCCC-C-----CCCCCcHHHHHHHHHHh
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTA-----------------KHIML-P-----QPINCPKEIFDLMCECW   57 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~~~~-----------------~~~~~-~-----~p~~~~~~l~~l~~~Cw   57 (86)
                      ++|||++  |..||.+.+.......+........                 ..... .     ....++.++.+|+.+|+
T Consensus       208 ~l~~ll~--g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (348)
T d2gfsa1         208 IMAELLT--GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  285 (348)
T ss_dssp             HHHHHHH--SSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHC
Confidence            4688998  7899998876655555443211000                 00000 0     01346788999999999


Q ss_pred             ccCCCCCCCHHHHHHH
Q psy10555         58 QKHDSDRPNFREIHLF   73 (86)
Q Consensus        58 ~~~p~~Rps~~~l~~~   73 (86)
                      ..||.+|||+.+++++
T Consensus       286 ~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         286 VLDSDKRITAAQALAH  301 (348)
T ss_dssp             CSSGGGSCCHHHHHTS
T ss_pred             cCChhhCcCHHHHhcC
Confidence            9999999999999884

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.6e-07  Score=57.41  Aligned_cols=30  Identities=17%  Similarity=0.426  Sum_probs=27.2

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+|+..||++|||+.+++++
T Consensus       269 ~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         269 VFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             TBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            357889999999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.4e-07  Score=58.10  Aligned_cols=75  Identities=13%  Similarity=0.044  Sum_probs=49.2

Q ss_pred             CEeceeecCCCCCCCCCCHHHHHHHHHhhhh-----------hccccCCC----------CCCCCCcHHHHHHHHHHhcc
Q psy10555          1 TLWEILTFAREQPYEDFSDQRVVEHISHFSR-----------STAKHIML----------PQPINCPKEIFDLMCECWQK   59 (86)
Q Consensus         1 ~l~Ei~t~g~~~P~~~~~~~~i~~~v~~~~~-----------~~~~~~~~----------~~p~~~~~~l~~l~~~Cw~~   59 (86)
                      ++|||++  |+.||...+..+.+..+....-           ........          ......++++.+|+.+|+..
T Consensus       212 il~el~~--g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~  289 (350)
T d1q5ka_         212 VLAELLL--GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY  289 (350)
T ss_dssp             HHHHHHH--TSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCS
T ss_pred             EEEehhh--CCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccC
Confidence            4689999  7899988776555444432100           00000000          01234688999999999999


Q ss_pred             CCCCCCCHHHHHHH--HHHh
Q psy10555         60 HDSDRPNFREIHLF--LQRK   77 (86)
Q Consensus        60 ~p~~Rps~~~l~~~--l~~~   77 (86)
                      ||++|||+.+++++  |+.+
T Consensus       290 dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         290 TPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             SGGGSCCHHHHHTSGGGGGG
T ss_pred             ChhHCcCHHHHhcCHhhccc
Confidence            99999999999875  5554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.5e-07  Score=54.65  Aligned_cols=31  Identities=13%  Similarity=-0.053  Sum_probs=27.5

Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         43 INCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        43 ~~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ...+..+.+|+.+|+..||.+|||+.|++++
T Consensus       253 ~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         253 PKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            4567889999999999999999999999774

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=4.9e-07  Score=55.58  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=27.5

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      ..+.++.+++.+|+..||.+|||+.+++.+
T Consensus       266 ~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         266 NADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            567789999999999999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1e-07  Score=58.84  Aligned_cols=28  Identities=11%  Similarity=0.099  Sum_probs=25.4

Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         46 PKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        46 ~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      +.++.+|+.+|+..||++|||+++++++
T Consensus       284 s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         284 ASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            4578899999999999999999999875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.76  E-value=5.9e-06  Score=50.14  Aligned_cols=30  Identities=17%  Similarity=0.132  Sum_probs=27.2

Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         44 NCPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        44 ~~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .++.++.+|+.+|+..||.+|||+.+++++
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            467889999999999999999999999873

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.89  E-value=8.1e-05  Score=45.28  Aligned_cols=29  Identities=21%  Similarity=0.165  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy10555         45 CPKEIFDLMCECWQKHDSDRPNFREIHLF   73 (86)
Q Consensus        45 ~~~~l~~l~~~Cw~~~p~~Rps~~~l~~~   73 (86)
                      .+.++.+|+.+|+..||.+|||+.+++.+
T Consensus       300 ~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         300 EAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             cCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            45678999999999999999999999875