Psyllid ID: psy10556

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Secondary Structure (PSIPRED)
cccccccEEEEcccEEEEccccccccccccccEEEccccccEEccccHHHHccccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHcHHHEEEcccccEEEccccccccccHHHcEEHHHccEEcHHHccHHHHEEEEEccccEEEEcEEcc
Coil and Loop (DISEMBL)
MAESTKNCLVHAGYSIKISNFGVVRNLYaadyydlggksalpiRWMAWESIvkvpsqdgpsqsyrifnl
Flexible Loop (DISEMBL)
MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVkvpsqdgpsqsyrifnl
Low Complexity Region (SEG)
MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Disordered region (IsUnstruct)
******NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV***************
Disordered Region (DISOPRED)
*AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Disordered Region (DISEMBL)
MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Disordered Region (DISPRO)
***STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	69	2.2.26 [Sep-21-2011]
Q63474	910	Epithelial discoidin doma	yes	N/A	0.710	0.053	0.591	3e-13
Q03146	911	Epithelial discoidin doma	yes	N/A	0.710	0.053	0.591	3e-13
Q16832	855	Discoidin domain-containi	no	N/A	0.710	0.057	0.591	4e-13
Q7YR43	909	Epithelial discoidin doma	yes	N/A	0.710	0.053	0.591	4e-13
Q08345	913	Epithelial discoidin doma	yes	N/A	0.710	0.053	0.591	4e-13
Q62371	854	Discoidin domain-containi	no	N/A	0.710	0.057	0.591	4e-13
P35739	799	High affinity nerve growt	no	N/A	0.710	0.061	0.530	7e-11
Q3UFB7	799	High affinity nerve growt	no	N/A	0.710	0.061	0.530	7e-11
P04629	796	High affinity nerve growt	no	N/A	0.710	0.061	0.530	8e-11
Q91044	827	NT-3 growth factor recept	no	N/A	0.710	0.059	0.530	4e-10

>sp|Q63474|DDR1_RAT Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct: 765 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 813

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|Q03146|DDR1_MOUSE Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct: 766 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 814

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing, but also tumor cell invasion. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Phosphorylates PTPN11 (By similarity). Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q16832|DDR2_HUMAN Discoidin domain-containing receptor 2 OS=Homo sapiens GN=DDR2 PE=1 SV=2

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 712 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 760

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q7YR43|DDR1_PANTR Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct: 764 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 812

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q08345|DDR1_HUMAN Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct: 768 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 816

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing (By similarity). Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q62371|DDR2_MOUSE Discoidin domain-containing receptor 2 OS=Mus musculus GN=Ddr2 PE=1 SV=2

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 711 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 759

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P35739|NTRK1_RAT High affinity nerve growth factor receptor OS=Rattus norvegicus GN=Ntrk1 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 655 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 703

Receptor tyrosine kinase involved in the development and the maturation of the central and peripheral nervous systems through regulation of proliferation, differentiation and survival of sympathetic and nervous neurons. High affinity receptor for NGF which is its primary ligand, it can also bind and be activated by NTF3/neurotrophin-3. However, NTF3 only supports axonal extension through NTRK1 but has no effect on neuron survival. Upon dimeric NGF ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades driving cell survival and differentiation. Through SHC1 and FRS2 activates a GRB2-Ras-MAPK cascade that regulates cell differentiation and survival. Through PLCG1 controls NF-Kappa-B activation and the transcription of genes involved in cell survival. Through SHC1 and SH2B1 controls a Ras-PI3 kinase-AKT1 signaling cascade that is also regulating survival. In absence of ligand and activation, may promote cell death, making the survival of neurons dependent on trophic factors.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q3UFB7|NTRK1_MOUSE High affinity nerve growth factor receptor OS=Mus musculus GN=Ntrk1 PE=1 SV=2

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 655 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 703

Receptor tyrosine kinase involved in the development and the maturation of the central and peripheral nervous systems through regulation of proliferation, differentiation and survival of sympathetic and nervous neurons. High affinity receptor for NGF which is its primary ligand, it can also bind and be activated by NTF3/neurotrophin-3. However, NTF3 only supports axonal extension through NTRK1 but has no effect on neuron survival. Upon dimeric NGF ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades driving cell survival and differentiation. Through SHC1 and FRS2 activates a GRB2-Ras-MAPK cascade that regulates cell differentiation and survival. Through PLCG1 controls NF-Kappa-B activation and the transcription of genes involved in cell survival. Through SHC1 and SH2B1 controls a Ras-PI3 kinase-AKT1 signaling cascade that is also regulating survival. In absence of ligand and activation, may promote cell death, making the survival of neurons dependent on trophic factors.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P04629|NTRK1_HUMAN High affinity nerve growth factor receptor OS=Homo sapiens GN=NTRK1 PE=1 SV=4

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 652 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 700

Isoform TrkA-III is resistant to NGF, constitutively activates AKT1 and NF-kappa-B and is unable to activate the Ras-MAPK signaling cascade. Antagonizes the anti-proliferative NGF-NTRK1 signaling that promotes neuronal precursors differentiation. Isoform TrkA-III promotes angiogenesis and has oncogenic activity when overexpressed.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q91044|NTRK3_CHICK NT-3 growth factor receptor OS=Gallus gallus GN=NTRK3 PE=2 SV=2

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 37/49 (75%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV A   +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI+
Sbjct: 683 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 731

Receptor for neurotrophin-3 (NT-3). This is a tyrosine-protein kinase receptor. Known substrates for the trk receptors are SHC1, PI-3 kinase and PLCG1. The KT and KD isoforms fail to stimulate transformation, process outgrowth or survival. Isoform KI25 exhibits tyrosine phosphorylation in the absence of ligand and is unable to mediate survival of neuronal cells.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
395754700	124	PREDICTED: discoidin domain-containing r	0.782	0.435	0.592	1e-12
224073049	763	PREDICTED: discoidin domain-containing r	0.710	0.064	0.612	2e-12
432091335	729	Discoidin domain-containing receptor 2 [	0.739	0.069	0.588	3e-12
61098306	873	general transcription factor IIH, polype	0.710	0.056	0.612	3e-12
118404968	879	discoidin domain receptor tyrosine kinas	0.710	0.055	0.591	3e-12
344307700	864	PREDICTED: epithelial discoidin domain-c	0.956	0.076	0.484	4e-12
405970308	953	Discoidin domain-containing receptor 2 [	0.710	0.051	0.632	4e-12
431916092	1499	Discoidin domain-containing receptor 2 [	0.710	0.032	0.591	4e-12
449509169	629	PREDICTED: LOW QUALITY PROTEIN: discoidi	0.710	0.077	0.591	6e-12
449268162	648	Discoidin domain-containing receptor 2,	0.710	0.075	0.591	7e-12

>gi|395754700|ref|XP_002832405.2| PREDICTED: discoidin domain-containing receptor 2-like [Pongo abelii]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 44/54 (81%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQ 57
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+ V SQ
Sbjct: 56  ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLVSSQ 109

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|224073049|ref|XP_002191748.1| PREDICTED: discoidin domain-containing receptor 2-like [Taeniopygia guttata]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/49 (61%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWMAWESI+
Sbjct: 610 ATRNCLVGNNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL 658

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432091335|gb|ELK24490.1| Discoidin domain-containing receptor 2 [Myotis davidii]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV 54
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+ V
Sbjct: 272 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLV 322

Source: Myotis davidii

Species: Myotis davidii

Genus: Myotis

Family: Vespertilionidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|61098306|ref|NP_001012818.1| general transcription factor IIH, polypeptide 4 precursor [Gallus gallus] gi|60098663|emb|CAH65162.1| hypothetical protein RCJMB04_4p22 [Gallus gallus]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/49 (61%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWMAWESI+
Sbjct: 728 ATRNCLVGNNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL 776

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|118404968|ref|NP_001072499.1| discoidin domain receptor tyrosine kinase 2 precursor [Xenopus (Silurana) tropicalis] gi|112419254|gb|AAI21932.1| discoidin domain receptor family, member 2 [Xenopus (Silurana) tropicalis]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IK+++FG+ RNLY+ DYY + G++ LPIRWMAWESI+
Sbjct: 734 ATRNCLVGNSYTIKVADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL 782

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344307700|ref|XP_003422518.1| PREDICTED: epithelial discoidin domain-containing receptor 1 [Loxodonta africana]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/66 (48%), Positives = 46/66 (69%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+ V     P+  
Sbjct: 769 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMVYLSQPPACP 828

Query: 64  YRIFNL 69
             ++ L
Sbjct: 829 LGVYEL 834

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405970308|gb|EKC35223.1| Discoidin domain-containing receptor 2 [Crassostrea gigas]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 42/49 (85%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKIS+FG+ R+LY+ADYY + G++ LPIRWMAWESI+
Sbjct: 794 ATRNCLVGTNYTIKISDFGMSRSLYSADYYRIEGRAVLPIRWMAWESIL 842

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|431916092|gb|ELK16346.1| Discoidin domain-containing receptor 2 [Pteropus alecto]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4    STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
            +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 1356 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 1404

Source: Pteropus alecto

Species: Pteropus alecto

Genus: Pteropus

Family: Pteropodidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449509169|ref|XP_004186239.1| PREDICTED: LOW QUALITY PROTEIN: discoidin domain-containing receptor 2 [Taeniopygia guttata]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 485 ATRNCLVGKHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 533

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449268162|gb|EMC79032.1| Discoidin domain-containing receptor 2, partial [Columba livia]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 504 ATRNCLVGKQYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 552

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
UNIPROTKB|F1NZD5	67	DDR2 "Uncharacterized protein"	0.710	0.731	0.591	4.4e-13
UNIPROTKB|H0Y9F4	277	DDR1 "Epithelial discoidin dom	0.710	0.176	0.591	9.8e-13
UNIPROTKB|Q5F3X2	873	GTF2H4 "Uncharacterized protei	0.710	0.056	0.612	3.1e-12
UNIPROTKB|J3KQG8	378	DDR1 "Epithelial discoidin dom	0.710	0.129	0.591	3.1e-12
MGI|MGI:1345277	854	Ddr2 "discoidin domain recepto	0.710	0.057	0.591	5e-12
UNIPROTKB|F1MIE0	855	DDR2 "Uncharacterized protein"	0.710	0.057	0.591	5e-12
UNIPROTKB|Q16832	855	DDR2 "Discoidin domain-contain	0.710	0.057	0.591	5e-12
UNIPROTKB|F1MCM5	466	DDR1 "Tyrosine-protein kinase	0.710	0.105	0.591	5e-12
UNIPROTKB|E2RNZ4	866	DDR2 "Uncharacterized protein"	0.710	0.056	0.591	5.1e-12
UNIPROTKB|F1S212	872	DDR2 "Uncharacterized protein"	0.710	0.056	0.591	5.1e-12

UNIPROTKB|F1NZD5 DDR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:     6 ATRNCLVGKRYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 54

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

UNIPROTKB|H0Y9F4 DDR1 "Epithelial discoidin domain-containing receptor 1" [Homo sapiens (taxid:9606)]

 Score = 170 (64.9 bits), Expect = 9.8e-13, P = 9.8e-13
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct:   125 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 173

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q5F3X2 GTF2H4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 176 (67.0 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 30/49 (61%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWMAWESI+
Sbjct:   728 ATRNCLVGNNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL 776

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J3KQG8 DDR1 "Epithelial discoidin domain-containing receptor 1" [Homo sapiens (taxid:9606)]

 Score = 170 (64.9 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct:   233 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 281

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1345277 Ddr2 "discoidin domain receptor family, member 2" [Mus musculus (taxid:10090)]

 Score = 174 (66.3 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:   711 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 759

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISO

GO:0005518 "collagen binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0030199 "collagen fibril organization" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=ISO

GO:0031214 "biomineral tissue development" evidence=IMP

GO:0035988 "chondrocyte proliferation" evidence=IMP

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=ISO;IDA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=ISO;IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IMP

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IMP

UNIPROTKB|F1MIE0 DDR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:   712 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 760

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|Q16832 DDR2 "Discoidin domain-containing receptor 2" [Homo sapiens (taxid:9606)]

 Score = 174 (66.3 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:   712 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 760

GO:0007155 "cell adhesion" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=IDA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IDA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=ISS

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0045860 "positive regulation of protein kinase activity" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=IMP

GO:0005518 "collagen binding" evidence=IDA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IDA

GO:0003416 "endochondral bone growth" evidence=ISS

GO:0035988 "chondrocyte proliferation" evidence=ISS;TAS

GO:0010715 "regulation of extracellular matrix disassembly" evidence=TAS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS;TAS

GO:0048146 "positive regulation of fibroblast proliferation" evidence=ISS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0030199 "collagen fibril organization" evidence=ISS

GO:0031214 "biomineral tissue development" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MCM5 DDR1 "Tyrosine-protein kinase receptor" [Bos taurus (taxid:9913)]

 Score = 170 (64.9 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   ++IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct:   321 ATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL 369

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|E2RNZ4 DDR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:   723 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 771

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F1S212 DDR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query:     4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
             +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct:   727 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 775

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q63474	DDR1_RAT	2, ., 7, ., 1, 0, ., 1	0.5918	0.7101	0.0538	yes	N/A
Q24488	ROR1_DROME	2, ., 7, ., 1, 0, ., 1	0.5102	0.7101	0.0715	yes	N/A
Q03146	DDR1_MOUSE	2, ., 7, ., 1, 0, ., 1	0.5918	0.7101	0.0537	yes	N/A
Q08345	DDR1_HUMAN	2, ., 7, ., 1, 0, ., 1	0.5918	0.7101	0.0536	yes	N/A
Q7YR43	DDR1_PANTR	2, ., 7, ., 1, 0, ., 1	0.5918	0.7101	0.0539	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	69
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-23
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-20
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	8e-20
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-19
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-15
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-15
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-15
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	8e-15
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-14
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-14
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-13
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-13
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	9e-13
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-12
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-11
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	8e-10
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-09
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-09
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-08
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-08
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	2e-08
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-07
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-06
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-06
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-06
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	4e-06
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-06
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	6e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	9e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	9e-06
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-05
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-05
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.001
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.001
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.001
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.002
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.003
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.003
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.003
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.004

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 88.6 bits (220), Expect = 2e-23
 Identities = 29/47 (61%), Positives = 40/47 (85%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           T+NCLV   Y+IKI++FG+ RNLY++DYY + G++ LPIRWMAWES+
Sbjct: 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESV 204

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 80.0 bits (197), Expect = 4e-20
 Identities = 30/49 (61%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWMAWESI+
Sbjct: 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL 204

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 79.6 bits (196), Expect = 8e-20
 Identities = 29/49 (59%), Positives = 41/49 (83%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV   Y+IKI++FG+ RNLY+ DYY + G++ LPIRWM+WESI+
Sbjct: 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL 205

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 77.3 bits (190), Expect = 5e-19
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV    +IKI++FG+ RNLYA DYY + G++ LPIRWMAWE I+
Sbjct: 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL 213

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 67.1 bits (164), Expect = 3e-15
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV  G ++KIS+FG+ R++Y+ADYY +  KS LP+RWM  E+I
Sbjct: 151 AARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI 198

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 66.7 bits (163), Expect = 3e-15
 Identities = 25/48 (52%), Positives = 34/48 (70%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +T+NCLV     +KI +FG+ R++Y  DYY +GG + LPIRWM  ESI
Sbjct: 149 ATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESI 196

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 66.9 bits (163), Expect = 3e-15
 Identities = 26/49 (53%), Positives = 38/49 (77%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 149 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 197

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 65.6 bits (160), Expect = 8e-15
 Identities = 25/48 (52%), Positives = 34/48 (70%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +T+NCLV     +KI++FG+ RN+Y+ADYY      A+PIRWM  ESI
Sbjct: 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESI 204

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 65.4 bits (159), Expect = 1e-14
 Identities = 26/49 (53%), Positives = 37/49 (75%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV A   +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI+
Sbjct: 150 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 198

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 64.5 bits (158), Expect = 2e-14
 Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV     +KIS+FG+ R+LY  DYY   G   LPIRWMA ES+
Sbjct: 132 NCLVGENLVVKISDFGLSRDLYDDDYYRKRGGK-LPIRWMAPESL 175

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 63.9 bits (156), Expect = 4e-14
 Identities = 23/48 (47%), Positives = 34/48 (70%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V    ++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 146 AARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 193

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 23/45 (51%), Positives = 29/45 (64%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV     +KIS+FG+ R++Y  DYY       LPIRWMA ES+
Sbjct: 135 NCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL 179

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
            +NCLV     +KIS+FG+ R++Y  DYY   G   LPI+WMA ES+
Sbjct: 130 ARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESL 176

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 63.3 bits (155), Expect = 5e-14
 Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV     +KIS+FG+ R+LY  DYY + G   LPIRWMA ES+
Sbjct: 133 NCLVGENLVVKISDFGLSRDLYDDDYYKVKGGK-LPIRWMAPESL 176

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 61.5 bits (149), Expect = 3e-13
 Identities = 23/48 (47%), Positives = 35/48 (72%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 146 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 193

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 61.2 bits (148), Expect = 4e-13
 Identities = 25/49 (51%), Positives = 36/49 (73%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV     +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI+
Sbjct: 147 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 195

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 60.4 bits (146), Expect = 9e-13
 Identities = 26/49 (53%), Positives = 36/49 (73%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+N LV    ++KIS+ G+ R +YAADYY L G S LPIRWM+ E+I+
Sbjct: 151 ATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM 199

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 59.7 bits (144), Expect = 1e-12
 Identities = 22/48 (45%), Positives = 35/48 (72%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+
Sbjct: 146 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 193

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 55.6 bits (134), Expect = 4e-11
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 5/52 (9%)

Query: 6   KNCLV-HAGYS----IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +NCLV   GY     +KI +FG+ R++Y +DYY   G+  LP+RWMA ES++
Sbjct: 135 RNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLL 186

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 52.1 bits (125), Expect = 8e-10
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)

Query: 6   KNCLVH---AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWES 50
           +NCL+     G   KI++FG+ R++Y A YY  GG++ LPI+WM  E+
Sbjct: 145 RNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEA 192

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 51.5 bits (123), Expect = 1e-09
 Identities = 22/49 (44%), Positives = 33/49 (67%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           + +N L+     +KIS+ G+ R +Y+ADYY +  KS LPIRWM  E+I+
Sbjct: 151 AARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM 199

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 50.7 bits (121), Expect = 2e-09
 Identities = 16/48 (33%), Positives = 34/48 (70%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+++   ++ +++FG+ + +Y+ DYY  G  S LP++W+A ES+
Sbjct: 140 AARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESL 187

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 1e-08
 Identities = 14/46 (30%), Positives = 32/46 (69%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +NC++    ++ +++FG+ + +Y+ DYY  G  + +P++W+A ES+
Sbjct: 142 RNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 187

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 48.2 bits (115), Expect = 2e-08
 Identities = 16/48 (33%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           +NC++   +++K+++FG+ R++Y  +YY +   +   LP++WMA ES+
Sbjct: 127 RNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL 174

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 47.8 bits (114), Expect = 2e-08
 Identities = 17/50 (34%), Positives = 31/50 (62%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NC++     +KI++  + R+L+  DY+ LG     P++WMA ES+V 
Sbjct: 144 AARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN 193

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 17/46 (36%), Positives = 30/46 (65%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N LV   + +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 161 RNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL 206

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 45.4 bits (107), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 33/48 (68%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+++   ++ +++FG+ + +Y  DYY  G  + +P++W+A ES+
Sbjct: 139 AARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL 186

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 44.8 bits (106), Expect = 3e-07
 Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV +   +K+S   + +++Y ++YY L   + +P+RW+A E++
Sbjct: 144 AARNCLVSSQREVKVSLLSLSKDVYNSEYYKL-RNALIPLRWLAPEAV 190

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 44.2 bits (104), Expect = 5e-07
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV  G  +KIS+FG+ R++Y  D Y    K  +P++WMA ES+
Sbjct: 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL 201

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 43.4 bits (102), Expect = 1e-06
 Identities = 18/49 (36%), Positives = 31/49 (63%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV 54
           +NCL+ A  ++KI ++G+  N Y  DYY    +  +P+RW+A E + +V
Sbjct: 129 RNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV 177

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 43.0 bits (101), Expect = 1e-06
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWE 49
           +NC + A  S+KI ++G+    Y  DYY      A+P+RW+A E
Sbjct: 129 RNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPE 172

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 42.6 bits (100), Expect = 2e-06
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R ++  DYY       LP++WMA E++
Sbjct: 161 AARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL 208

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 41.9 bits (98), Expect = 4e-06
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 214

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 164 AARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEAL 211

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL 208

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 41.3 bits (97), Expect = 5e-06
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N LV +   +K+ +FG+ R L    YY    K  LPI+WMA ESI
Sbjct: 136 RNVLVSSPDCVKLGDFGLSRYLEDESYYK-ASKGKLPIKWMAPESI 180

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 40.9 bits (96), Expect = 6e-06
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N L+  G  +KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 170 RNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 215

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.0 bits (96), Expect = 6e-06
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N L+     +KI +FG+ R++Y    Y   G + LP++WMA ESI
Sbjct: 202 RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 7e-06
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 4/48 (8%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESI 51
           +N LV     +KI++FG+ + L   +  Y+  GGK  +PI+WMA ESI
Sbjct: 138 RNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGK--VPIKWMALESI 183

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 40.6 bits (95), Expect = 9e-06
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 241 RNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 286

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 9e-06
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA ESI
Sbjct: 201 AARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 4   STKNCLVHAGYSIKISNFGVVR--NLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +N LV +   +KI++FG+ R  ++   +Y+  GGK  +PI+WMA ESI+ 
Sbjct: 136 AARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK--VPIKWMALESILH 185

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G  +KI +FG+ R++     Y   G + LP++WMA ESI
Sbjct: 264 AARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI 311

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 206 AARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 253

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G  +KI +FG+ R++     Y   G + LP++WMA ESI
Sbjct: 266 AARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI 313

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 38.7 bits (90), Expect = 4e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 241 AARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI 288

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.8 bits (90), Expect = 4e-05
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 136 AARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGK--VPIKWMALESIL 184

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 38.8 bits (90), Expect = 5e-05
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV     +KIS+FG+ R      Y   GG   +P++W A E++
Sbjct: 121 AARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEAL 168

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+ +   ++I++FGV   LY  D      +   PI+WMA ESI
Sbjct: 136 AARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI 183

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +NCLV     +KIS+FG+ R      Y    G   +PI+W A E++
Sbjct: 122 RNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEAL 167

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 6   KNCLVHAGYSIKISNFGVVRNL-YAADYYDLGGKSALPIRWMAWESI 51
           +N L+ +   +KI +FG++R L    D+Y +     +P  W A ES+
Sbjct: 126 RNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL 172

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 15/64 (23%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           +N LV++    K+S+FG+ R L  ++  Y   GGK   PIRW A E+I           +
Sbjct: 135 RNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKI--PIRWTAPEAI-----------A 181

Query: 64  YRIF 67
           YR F
Sbjct: 182 YRKF 185

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +KI++FG+ R L     +Y   GGK  +PI+WMA E I
Sbjct: 136 AARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK--MPIKWMALECI 183

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 35.2 bits (81), Expect = 9e-04
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV   + +K+++FG+ R L   D Y     +  PI+W A ES+
Sbjct: 131 AARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 177

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLY---AADYYDLGGKSALPIRWMAWESI 51
           + +N LV++    K+S+FG+ R L     A Y   GGK  +PIRW A E+I
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK--IPIRWTAPEAI 181

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLY---AADYYDLGGKSALPIRWMAWESI 51
           + +N LV++    K+S+FG+ R L       Y   GGK  +PIRW A E+I
Sbjct: 134 AARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGK--IPIRWTAPEAI 182

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNL-YAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +KIS+FG+ + L    DYY +      PI W A E +
Sbjct: 136 AARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL 184

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWE 49
           +NCLV     +K+S+FG+ R +    Y    G +  P++W   E
Sbjct: 129 RNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG-TKFPVKWAPPE 171

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV     +KIS+FG+ R      Y   G K  +PI+W A E++
Sbjct: 120 AARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ-IPIKWTAPEAL 166

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYA-ADYY--DLGGKSALPIRWMAWESI 51
           +N L+   +  KIS+FG+ R L A +DYY     G+   P++W A E I
Sbjct: 124 RNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR--WPLKWYAPECI 170

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 33.4 bits (76), Expect = 0.003
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV   Y  KI++FG+ R     + Y       LP+RWMA ES+
Sbjct: 151 AARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL 195

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NCLV     +K+S+FG+ R     D Y     +  P++W + E  
Sbjct: 127 AARNCLVGENQVVKVSDFGMTR-FVLDDQYTSSTGTKFPVKWSSPEVF 173

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
KOG0197|consensus	468		99.86
KOG1026|consensus	774		99.83
KOG0196|consensus	996		99.79
KOG1095|consensus	1025		99.79
KOG0200|consensus	609		99.71
KOG0194|consensus	474		99.69
KOG1094|consensus	807		99.68
KOG0581|consensus	364		99.67
KOG4257|consensus	974		99.61
KOG4278|consensus	1157		99.59
KOG0983|consensus	391		99.58
KOG0616|consensus	355		99.57
KOG0192|consensus	362		99.56
KOG0598|consensus	357		99.56
KOG0984|consensus	282		99.54
KOG4721|consensus	904		99.52
KOG1006|consensus	361		99.52
KOG0199|consensus	1039		99.51
KOG0694|consensus	694		99.5
KOG0198|consensus	313		99.5
KOG0593|consensus	396		99.49
KOG0661|consensus	538		99.49
KOG0582|consensus	516		99.48
KOG0659|consensus	318		99.48
KOG0595|consensus	429		99.46
KOG0583|consensus	370		99.46
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.46
KOG0578|consensus	550		99.46
KOG0594|consensus	323		99.45
KOG0588|consensus	786		99.43
KOG0591|consensus	375		99.43
KOG0663|consensus	419		99.43
KOG1024|consensus	563		99.43
KOG1187|consensus	361		99.41
KOG0600|consensus	560		99.4
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.39
KOG0660|consensus	359		99.38
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.38
KOG0986|consensus	591		99.37
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.36
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.35
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.34
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.34
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.34
KOG0201|consensus	467		99.33
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.33
KOG0577|consensus	948		99.33
KOG0597|consensus	808		99.33
PTZ00283	496	serine/threonine protein kinase; Provisional	99.33
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.32
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.32
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.32
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.32
KOG0615|consensus	475		99.32
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.31
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.31
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.31
KOG0696|consensus	683		99.31
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.31
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.31
KOG1025|consensus	1177		99.3
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.3
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.3
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.3
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.3
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.3
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.29
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.29
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.29
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.29
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.29
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.29
KOG0667|consensus	586		99.28
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.28
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.28
KOG0611|consensus	668		99.27
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.27
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.27
KOG0579|consensus	1187		99.27
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.27
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.27
PTZ00267	478	NIMA-related protein kinase; Provisional	99.27
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.27
KOG0658|consensus	364		99.26
KOG0614|consensus	732		99.26
KOG4236|consensus	888		99.26
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.26
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.26
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.25
KOG0592|consensus	604		99.25
KOG0599|consensus	411		99.25
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.25
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.25
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.25
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.25
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.25
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.25
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.24
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.24
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.24
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.24
KOG0574|consensus	502		99.24
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.24
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.24
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.24
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.24
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.24
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.24
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.23
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.23
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.23
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.23
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.23
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.23
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.22
PHA03207	392	serine/threonine kinase US3; Provisional	99.22
PHA03211	461	serine/threonine kinase US3; Provisional	99.22
KOG0575|consensus	592		99.22
PHA02882	294	putative serine/threonine kinase; Provisional	99.21
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.21
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.21
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.21
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.21
KOG2052|consensus	513		99.21
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.21
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.21
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.21
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.2
KOG0664|consensus	449		99.2
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.2
PHA03210	501	serine/threonine kinase US3; Provisional	99.2
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.2
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.2
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.2
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.2
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.2
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.19
KOG0666|consensus	438		99.19
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.19
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.19
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.18
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.18
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.18
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.17
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.17
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.16
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.16
PHA03212	391	serine/threonine kinase US3; Provisional	99.16
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.16
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.16
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.16
PHA03209	357	serine/threonine kinase US3; Provisional	99.16
PHA02988	283	hypothetical protein; Provisional	99.14
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.14
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.14
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.14
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.13
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.13
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.13
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.13
KOG3653|consensus	534		99.13
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.12
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.12
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.12
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.12
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.12
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.12
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.12
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.11
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.11
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.11
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.11
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.11
KOG0193|consensus	678		99.11
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.11
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.11
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.11
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.1
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.1
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.1
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.1
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.1
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.1
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.1
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.1
PTZ00036	440	glycogen synthase kinase; Provisional	99.1
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.1
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.09
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.09
KOG0587|consensus	953		99.09
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.08
KOG0662|consensus	292		99.08
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.08
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.07
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.07
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.07
PTZ00284	467	protein kinase; Provisional	99.07
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.06
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.06
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.05
KOG4717|consensus	864		99.05
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.05
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.05
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.05
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.05
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.04
KOG0585|consensus	576		99.04
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.04
KOG0612|consensus	1317		99.04
KOG0580|consensus	281		99.04
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.04
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.03
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.03
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.02
PLN00181	793	protein SPA1-RELATED; Provisional	99.01
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.01
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.0
KOG0589|consensus	426		99.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.99
KOG0690|consensus	516		98.99
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.99
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.99
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.99
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.99
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.99
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.98
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.98
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.97
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.95
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.93
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.93
KOG4279|consensus	1226		98.93
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.93
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.93
KOG1151|consensus	775		98.92
KOG0584|consensus	632		98.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.92
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.92
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.92
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.92
KOG0033|consensus	355		98.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.91
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.9
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.9
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.9
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.9
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.9
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.9
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.89
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.89
KOG0669|consensus	376		98.89
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.88
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.88
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.88
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.87
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.87
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.87
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.86
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.85
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.85
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.85
KOG4645|consensus	1509		98.85
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.85
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.84
KOG0605|consensus	550		98.84
KOG0695|consensus	593		98.84
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.83
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.83
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.83
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.82
KOG0032|consensus	382		98.82
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.82
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.82
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.82
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.82
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.82
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.81
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.81
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.81
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.81
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.81
KOG0603|consensus	612		98.81
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.81
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.8
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.8
KOG0670|consensus	752		98.8
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.8
KOG0610|consensus	459		98.8
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.8
KOG0665|consensus	369		98.79
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.79
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.79
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.78
KOG1027|consensus	903		98.78
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.78
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.78
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.78
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.78
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.78
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.78
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.77
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.77
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.77
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.77
KOG0586|consensus	596		98.77
KOG0604|consensus	400		98.76
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.76
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.76
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.76
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.76
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.75
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.75
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.75
KOG0596|consensus	677		98.75
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.75
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.74
KOG0603|consensus	612		98.74
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.73
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.73
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.73
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.72
PLN00009	294	cyclin-dependent kinase A; Provisional	98.72
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.72
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.72
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.72
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.7
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.7
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.7
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.7
KOG4250|consensus	732		98.69
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.69
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.69
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.68
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.67
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.67
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.67
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.67
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.67
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.66
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.66
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.66
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.66
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.66
KOG0608|consensus	1034		98.64
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.63
KOG1989|consensus	738		98.63
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.62
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.62
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.61
KOG0671|consensus	415		98.6
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.6
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.6
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.58
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.57
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.57
KOG0590|consensus	601		98.56
KOG2345|consensus	302		98.56
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.56
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.56
KOG1152|consensus	772		98.55
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.55
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.55
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.54
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.53
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.5
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.48
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.46
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.43
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.37
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.35
KOG1035|consensus	1351		98.31
KOG1345|consensus	378		98.28
KOG0576|consensus	829		98.17
PRK09188	365	serine/threonine protein kinase; Provisional	98.04
KOG0668|consensus	338		98.01
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.01
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.98
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.77
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.71
KOG1033|consensus	516		97.57
KOG1023|consensus	484		97.54
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.36
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.3
KOG0590|consensus	601		97.25
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.2
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.11
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.08
PRK12274	218	serine/threonine protein kinase; Provisional	96.98
KOG0606|consensus	1205		96.88
KOG0195|consensus	448		96.84
KOG1290|consensus	590		96.71
KOG0607|consensus	463		96.69
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.63
KOG1164|consensus	322		96.3
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.23
KOG4158|consensus	598		96.21
smart00090	237	RIO RIO-like kinase.	96.05
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	95.81
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.53
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	95.22
PRK14879	211	serine/threonine protein kinase; Provisional	95.13
PRK09605	535	bifunctional UGMP family protein/serine/threonine	94.98
PRK10345	210	hypothetical protein; Provisional	94.78
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	94.67
KOG1165|consensus	449		94.45
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	93.87
KOG2137|consensus	700		93.42
KOG0601|consensus	524		92.62
KOG1240|consensus	1431		88.0
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	87.83
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	87.01
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	86.29
KOG1163|consensus	341		86.15
KOG1167|consensus	418		85.94
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	84.86
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	84.85
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	84.03
PRK10271	188	thiK thiamine kinase; Provisional	81.85
PF01636	239	APH: Phosphotransferase enzyme family This family	80.88
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	80.61

>KOG0197|consensus

Probab=99.86  E-value=1e-22  Score=109.44  Aligned_cols=66  Identities=26%  Similarity=0.425  Sum_probs=56.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .||.++|||++.+..+|++|||+++...... +......+.|++|+|||.+..+. +.++|+|||||+
T Consensus       327 RDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVl  393 (468)
T KOG0197|consen  327 RDLAARNILVDEDLVVKISDFGLARLIGDDE-YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVL  393 (468)
T ss_pred             hhhhhhheeeccCceEEEcccccccccCCCc-eeecCCCCCCceecCHHHHhhCCcccccceeehhhh
Confidence            4899999999999999999999999544333 44555667899999999999887 569999999986

>KOG1026|consensus

Probab=99.83  E-value=5.7e-22  Score=111.00  Aligned_cols=67  Identities=39%  Similarity=0.745  Sum_probs=61.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .||..+|+|+..+..+|+.|||+++..+..++|.......+|+|||+||.+.+++ .+.+|+|+|||.
T Consensus       627 RDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv  694 (774)
T KOG1026|consen  627 RDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV  694 (774)
T ss_pred             cchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence            4899999999999999999999999999999998877788999999999999988 569999999974

>KOG0196|consensus

Probab=99.79  E-value=2.5e-20  Score=104.90  Aligned_cols=66  Identities=30%  Similarity=0.415  Sum_probs=54.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC--cceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA--DYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .||.++|||++.+..||+.|||+++.+...  .++. ..++++|+||+|||.+..++ .+.+|+|||||.
T Consensus       755 RDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt-t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIV  823 (996)
T KOG0196|consen  755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT-TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  823 (996)
T ss_pred             hhhhhhheeeccceEEEeccccceeecccCCCcccc-ccCCccceeecChhHhhhcccCchhhccccceE
Confidence            489999999999999999999999965422  2333 33568899999999999988 568999999984

>KOG1095|consensus

Probab=99.79  E-value=1.6e-20  Score=107.78  Aligned_cols=68  Identities=29%  Similarity=0.624  Sum_probs=60.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~~   68 (69)
                      .||.++|+|++....+|+.|||+++.+...+++........|++||+||.+..+. .+++|+|+|||+.
T Consensus       826 RDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVll  894 (1025)
T KOG1095|consen  826 RDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLL  894 (1025)
T ss_pred             cchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHH
Confidence            4899999999999999999999999888888777766668899999999999766 6799999999863

>KOG0200|consensus

Probab=99.71  E-value=3.1e-18  Score=95.55  Aligned_cols=67  Identities=31%  Similarity=0.583  Sum_probs=54.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecC-CCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLG-GKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+.++||++..+..+|++|||+++......++... ....+|++|||||.+.... ..++|+|||||+
T Consensus       442 RDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~  510 (609)
T KOG0200|consen  442 RDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGIL  510 (609)
T ss_pred             hhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHH
Confidence            489999999999999999999999976665555432 2223799999999999855 458999999985

>KOG0194|consensus

Probab=99.69  E-value=1.3e-17  Score=90.61  Aligned_cols=66  Identities=29%  Similarity=0.354  Sum_probs=52.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~~   68 (69)
                      .|+.++|+|++.+..+|++|||+++.-.  .+.......++|++|+|||.+.... ..+.|+|+|||.+
T Consensus       286 RDIAARNcL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~  352 (474)
T KOG0194|consen  286 RDIAARNCLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL  352 (474)
T ss_pred             hhHhHHHheecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeE
Confidence            4889999999999999999999987532  2222222346899999999999877 4699999999874

>KOG1094|consensus

Probab=99.68  E-value=9.8e-18  Score=92.72  Aligned_cols=66  Identities=44%  Similarity=0.905  Sum_probs=59.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+.++|+|++.+.++|++|||+++.+...+++........|+||||+|.+..++ .+++|+|+||+
T Consensus       661 rd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgv  727 (807)
T KOG1094|consen  661 RDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGV  727 (807)
T ss_pred             ccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHH
Confidence            3789999999999999999999999988888887777777899999999999877 66999999986

>KOG0581|consensus

Probab=99.67  E-value=1.9e-17  Score=86.87  Aligned_cols=62  Identities=21%  Similarity=0.104  Sum_probs=49.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+||.|+|++.++.+|++|||.++.+.+..+ ...   .++..||+||.+.+..+ .++|+|++|+
T Consensus       203 RDIKPsNlLvNskGeVKicDFGVS~~lvnS~a-~tf---vGT~~YMsPERi~g~~Ys~~sDIWSLGL  265 (364)
T KOG0581|consen  203 RDIKPSNLLVNSKGEVKICDFGVSGILVNSIA-NTF---VGTSAYMSPERISGESYSVKSDIWSLGL  265 (364)
T ss_pred             ccCCHHHeeeccCCCEEeccccccHHhhhhhc-ccc---cccccccChhhhcCCcCCcccceecccH
Confidence            58999999999999999999999987655421 111   12345999999998774 5899999986

>KOG4257|consensus

Probab=99.61  E-value=4.7e-17  Score=90.89  Aligned_cols=66  Identities=29%  Similarity=0.475  Sum_probs=56.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+.++|||+.....+|+.|||+++.+....++... ..+.|++||+||.+..+. .+.+|+|.|||+
T Consensus       515 RDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVC  581 (974)
T KOG4257|consen  515 RDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVC  581 (974)
T ss_pred             hhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHH
Confidence            478999999999999999999999987766666443 557899999999999877 568999999875

>KOG4278|consensus

Probab=99.59  E-value=9.8e-17  Score=89.96  Aligned_cols=66  Identities=24%  Similarity=0.463  Sum_probs=56.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .||.++|+|+..+..+|+.|||+++.+.... +....+.+.|+.|+|||.+.... ..++|+|+|||+
T Consensus       389 RDLAARNCLVgEnhiVKvADFGLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVL  455 (1157)
T KOG4278|consen  389 RDLAARNCLVGENHIVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL  455 (1157)
T ss_pred             hhhhhhhccccccceEEeeccchhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHH
Confidence            4789999999999999999999999765544 55566678899999999999877 569999999986

>KOG0983|consensus

Probab=99.58  E-value=1.5e-15  Score=78.46  Aligned_cols=63  Identities=21%  Similarity=0.162  Sum_probs=49.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~-~~~~~w~~~i   66 (69)
                      .|+||.|||++..+.+|++|||++..+....+.....+ + |. |||||.+-...   + -++|+|++||
T Consensus       216 RDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAG-C-~~-YMaPERidp~~~~kYDiRaDVWSlGI  282 (391)
T KOG0983|consen  216 RDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAG-C-AA-YMAPERIDPPDKPKYDIRADVWSLGI  282 (391)
T ss_pred             cccCccceEEccCCCEEeecccccceeecccccccccC-C-cc-ccCccccCCCCCCccchhhhhhhhcc
Confidence            48999999999999999999999987776655544332 2 33 99999987532   2 3799999997

>KOG0616|consensus

Probab=99.57  E-value=2.7e-16  Score=81.40  Aligned_cols=62  Identities=18%  Similarity=0.193  Sum_probs=49.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||+|||++.+|.+|+.|||++...... .+..    ++...|+|||++.... ...+|.|++||+
T Consensus       168 RDLKPENiLlD~~G~iKitDFGFAK~v~~r-T~Tl----CGTPeYLAPEii~sk~ynkavDWWalGVL  230 (355)
T KOG0616|consen  168 RDLKPENLLLDQNGHIKITDFGFAKRVSGR-TWTL----CGTPEYLAPEIIQSKGYNKAVDWWALGVL  230 (355)
T ss_pred             ccCChHHeeeccCCcEEEEeccceEEecCc-EEEe----cCCccccChHHhhcCCCCcchhHHHHHHH
Confidence            489999999999999999999999765433 2322    2245699999999876 457899998875

>KOG0192|consensus

Probab=99.56  E-value=1.1e-15  Score=81.34  Aligned_cols=65  Identities=26%  Similarity=0.327  Sum_probs=48.2

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEeccccccC--C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV--P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~-~~~~~~w~~~i~   67 (69)
                      .|||+.|+|++.+. ++|++|||+++......  .......+..+|||||++.+.  . ..++|++||||.
T Consensus       167 rDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv  235 (362)
T KOG0192|consen  167 RDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV  235 (362)
T ss_pred             cccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH
Confidence            48999999999997 99999999997543321  111112234569999999953  4 568999999975

>KOG0598|consensus

Probab=99.56  E-value=6e-16  Score=81.28  Aligned_cols=65  Identities=17%  Similarity=0.101  Sum_probs=48.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||+|||++..|++++.|||++...........  ..+++.-|||||++.... ...+|.|+-||+
T Consensus       149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~--tfcGT~eYmAPEil~~~gy~~~vDWWsLGil  214 (357)
T KOG0598|consen  149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR--TFCGTPEYMAPEILLGKGYDKAVDWWSLGIL  214 (357)
T ss_pred             ccCCHHHeeecCCCcEEEeccccchhcccCCCccc--cccCCccccChHHHhcCCCCcccchHhHHHH
Confidence            48999999999999999999999985433221111  123445699999999766 458999988764

>KOG0984|consensus

Probab=99.54  E-value=2.6e-15  Score=75.00  Aligned_cols=63  Identities=24%  Similarity=0.221  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i   66 (69)
                      .|+||.|||++..+++|++|||.+..+..+-+..... ++-|  |||||.+..+.     .-++|+||.||
T Consensus       173 RDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~da-GCkp--YmaPEri~~e~n~~gY~vksDvWSLGI  240 (282)
T KOG0984|consen  173 RDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDA-GCKP--YMAPERINPELNQKGYSVKSDVWSLGI  240 (282)
T ss_pred             ccCCcceEEEccCCcEEEcccccceeehhhhHHHHhc-CCCc--cCChhhcCcccCcccceeehhhhhhhh
Confidence            4899999999999999999999998766553333222 2334  99999988532     23799999876

>KOG4721|consensus

Probab=99.52  E-value=1.4e-15  Score=84.57  Aligned_cols=64  Identities=27%  Similarity=0.326  Sum_probs=50.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|||..|||+..+..+|++|||.++.+..... ....  .+...|||||++.... ..++|+|+|||.
T Consensus       236 RDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST-kMSF--aGTVaWMAPEvIrnePcsEKVDIwSfGVV  300 (904)
T KOG4721|consen  236 RDLKSPNILISYDDVVKISDFGTSKELSDKST-KMSF--AGTVAWMAPEVIRNEPCSEKVDIWSFGVV  300 (904)
T ss_pred             hccCCCceEeeccceEEeccccchHhhhhhhh-hhhh--hhhHhhhCHHHhhcCCcccccceehhHHH
Confidence            48999999999999999999999876543321 1211  2345699999999877 789999999973

>KOG1006|consensus

Probab=99.52  E-value=3e-15  Score=76.99  Aligned_cols=63  Identities=21%  Similarity=0.206  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i   66 (69)
                      .|+||.|||++..+.+|++|||.+..+..+-+.... .++.|  |||||.+....   .-++|+||-||
T Consensus       192 RDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d-aGCrp--YmAPERi~p~~~gyDiRSDvWSLGI  257 (361)
T KOG1006|consen  192 RDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD-AGCRP--YMAPERIDPSDKGYDIRSDVWSLGI  257 (361)
T ss_pred             ccCChhheEEecCCCEeeecccchHhHHHHHHhhhc-cCCcc--ccChhccCCccCCcchhhhhhhhcc
Confidence            489999999999999999999999876544222222 23445  99999998643   24799999886

>KOG0199|consensus

Probab=99.51  E-value=4.9e-15  Score=83.77  Aligned_cols=66  Identities=26%  Similarity=0.428  Sum_probs=56.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-cceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+.++|+++.....+|++|||+.+-+..+ ..|......++|+.|-|||.+..+. ..++|+|.|||
T Consensus       236 RDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGV  303 (1039)
T KOG0199|consen  236 RDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGV  303 (1039)
T ss_pred             hhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhh
Confidence            488999999999999999999999987755 4565666778999999999999887 56899999987

>KOG0694|consensus

Probab=99.50  E-value=1.9e-15  Score=84.26  Aligned_cols=65  Identities=14%  Similarity=0.113  Sum_probs=49.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCC-CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQ-DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~w~~~i~   67 (69)
                      .|||..|||++..|.+|++|||++.......  ......+++..|||||++.+..|+ .+|.|++||+
T Consensus       492 RDlKLdNiLLD~eGh~kiADFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVL  557 (694)
T KOG0694|consen  492 RDLKLDNLLLDTEGHVKIADFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVL  557 (694)
T ss_pred             eecchhheEEcccCcEEecccccccccCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHH
Confidence            4899999999999999999999997533111  112223445679999999987754 7899999986

>KOG0198|consensus

Probab=99.50  E-value=2.7e-14  Score=74.81  Aligned_cols=67  Identities=18%  Similarity=0.122  Sum_probs=47.3

Q ss_pred             CCcccceeEEcC-CCeEEEcccCccccccc-CcceecCCCcccceeEEeccccccCCCC--CCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESIVKVPSQ--DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aPe~~~~~~~~--~~~~w~~~i~   67 (69)
                      ||+|+.|||++. ++.+|++|||++..... ...........++..|||||++..+...  .+|+|++|.-
T Consensus       141 ~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt  211 (313)
T KOG0198|consen  141 CDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT  211 (313)
T ss_pred             cCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence            699999999999 79999999998875442 1111111122334569999999965433  8999998753

>KOG0593|consensus

Probab=99.49  E-value=5.6e-15  Score=77.04  Aligned_cols=62  Identities=23%  Similarity=0.293  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-cCcceecCCCcccceeEE-eccccccCC-C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-AADYYDLGGKSALPIRWM-AWESIVKVP-S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-aPe~~~~~~-~-~~~~~w~~~i   66 (69)
                      .|+||+||+++.++.+|++|||+++.+. +.+.+.    .++..||. |||.+.+.. + ..+|+|+-|.
T Consensus       125 RDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT----DYVATRWYRaPELLvGDtqYG~pVDiWAiGC  190 (396)
T KOG0593|consen  125 RDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT----DYVATRWYRAPELLVGDTQYGKPVDIWAIGC  190 (396)
T ss_pred             ccCChhheEEecCCcEEeccchhhHhhcCCcchhh----hhhhhhhccChhhhcccCcCCCcccchhhhH
Confidence            4899999999999999999999999766 333332    24455565 999999855 3 4789997653

>KOG0661|consensus

Probab=99.49  E-value=5.5e-15  Score=80.18  Aligned_cols=62  Identities=19%  Similarity=0.237  Sum_probs=48.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEE-eccccccCC-C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWM-AWESIVKVP-S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-aPe~~~~~~-~-~~~~~w~~~i   66 (69)
                      .|+||+|||+..+..+|++|||++|......    ....++..||. |||++.... | ..+|+|++|.
T Consensus       134 RDlKPENiLi~~~~~iKiaDFGLARev~Skp----PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~Gc  198 (538)
T KOG0661|consen  134 RDLKPENILISGNDVIKIADFGLAREVRSKP----PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGC  198 (538)
T ss_pred             ccCChhheEecccceeEecccccccccccCC----CcchhhhcccccchHHhhhccccCCchHHHHHHH
Confidence            5899999999999999999999999765433    22345566676 999998654 3 4899998763

>KOG0582|consensus

Probab=99.48  E-value=9.8e-15  Score=78.82  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc--ceecCCCcccceeEEeccccccCC---CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~~   68 (69)
                      +|+|+.|||++.+|.+|+.|||.+..+....  .............|||||++....   ..++|+|+|||-+
T Consensus       150 RdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA  222 (516)
T KOG0582|consen  150 RDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITA  222 (516)
T ss_pred             cccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHH
Confidence            4899999999999999999999876544321  111111112234599999966433   4589999999843

>KOG0659|consensus

Probab=99.48  E-value=1.6e-14  Score=74.03  Aligned_cols=62  Identities=18%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeE-EeccccccCC-C-CCCCceEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRW-MAWESIVKVP-S-QDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~aPe~~~~~~-~-~~~~~w~~~   65 (69)
                      .|+||.|+|++.++.+|++|||+++.+.....  ...+. +..|| -|||.+.+.+ | ..+|+|+-|
T Consensus       125 RDlKPnNLLis~~g~lKiADFGLAr~f~~p~~--~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavG  189 (318)
T KOG0659|consen  125 RDLKPNNLLISSDGQLKIADFGLARFFGSPNR--IQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVG  189 (318)
T ss_pred             ccCCccceEEcCCCcEEeecccchhccCCCCc--ccccc-eeeeeccChHHhccchhcCCcchhhhHH
Confidence            48999999999999999999999998765431  11122 23455 4999999876 3 478999765

>KOG0595|consensus

Probab=99.46  E-value=6.3e-15  Score=78.58  Aligned_cols=63  Identities=22%  Similarity=0.225  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCC------CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG------YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~------~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+||+|||+...      -.+|++|||+++.+.+.......  ...|. |||||++...+| .+.|+|+-|.
T Consensus       133 RDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl--cGSpl-YMAPEV~~~~~YdAKADLWSiG~  202 (429)
T KOG0595|consen  133 RDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL--CGSPL-YMAPEVIMSQQYDAKADLWSIGT  202 (429)
T ss_pred             ccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh--hCCcc-ccCHHHHHhccccchhhHHHHHH
Confidence            5899999999875      56899999999976544311111  12344 999999987774 5899998663

>KOG0583|consensus

Probab=99.46  E-value=1.4e-14  Score=77.48  Aligned_cols=63  Identities=14%  Similarity=0.066  Sum_probs=48.2

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccc-cCcceecCCCcccceeEEeccccccCC-C--CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLY-AADYYDLGGKSALPIRWMAWESIVKVP-S--QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~-~--~~~~~w~~~i   66 (69)
                      .|+|++|++++.+ +.+|+.|||++.... .....   ...++...|+|||++.... +  ..+|+||.||
T Consensus       144 RDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l---~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV  211 (370)
T KOG0583|consen  144 RDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLL---KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV  211 (370)
T ss_pred             CCCCHHHEEecCCCCCEEEeccccccccCCCCCcc---cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence            5899999999999 999999999998652 22211   1223345699999999866 4  4799999986

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.46  E-value=1.4e-14  Score=76.03  Aligned_cols=67  Identities=28%  Similarity=0.527  Sum_probs=48.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||+++................+..|+|||.+.... ..++|+|++|+.
T Consensus       198 rDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i  265 (338)
T cd05102         198 RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVL  265 (338)
T ss_pred             CCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHH
Confidence            4899999999999999999999987543222111111122345699999987655 568999998863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0578|consensus

Probab=99.46  E-value=2.6e-14  Score=78.41  Aligned_cols=66  Identities=20%  Similarity=0.254  Sum_probs=49.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~~   68 (69)
                      +|+|..||+++.++.+|+.|||++..+..... .+..-.. ...|||||++.... ..++|+|+.||-+
T Consensus       393 rDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~TmVG-TPYWMAPEVvtrk~YG~KVDIWSLGIMa  459 (550)
T KOG0578|consen  393 RDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRSTMVG-TPYWMAPEVVTRKPYGPKVDIWSLGIMA  459 (550)
T ss_pred             eccccceeEeccCCcEEEeeeeeeeccccccC-ccccccC-CCCccchhhhhhcccCccccchhhhhHH
Confidence            58999999999999999999999976654331 1111112 34599999998655 4699999999854

>KOG0594|consensus

Probab=99.45  E-value=2.9e-14  Score=74.57  Aligned_cols=63  Identities=17%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-cCcceecCCCcccceeEEeccccccCC--CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-AADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i   66 (69)
                      .|+||+|++++.++.+|++|||+++.+. +.+.+   .+..+..+|-|||++.+..  .+.+|+|+.|.
T Consensus       144 RDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~y---t~evvTlWYRaPEvLlGs~~Ys~~vDiWs~Gc  209 (323)
T KOG0594|consen  144 RDLKPQNLLISSSGVLKLADFGLARAFSIPMRTY---TPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGC  209 (323)
T ss_pred             ccCCcceEEECCCCcEeeeccchHHHhcCCcccc---cccEEEeeccCHHHhcCCCcCCCCcchHhHHH
Confidence            4899999999999999999999998654 22322   2334456667999999875  45899998763

>KOG0588|consensus

Probab=99.43  E-value=2.9e-14  Score=79.95  Aligned_cols=63  Identities=19%  Similarity=0.145  Sum_probs=50.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i   66 (69)
                      .|+|++|+|++.+..+|++|||++..-.+...   ....|+...|.+||++.+.+|  ..+|+|+.||
T Consensus       136 RDLKpENlLLd~~~nIKIADFGMAsLe~~gkl---LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGV  200 (786)
T KOG0588|consen  136 RDLKPENLLLDVKNNIKIADFGMASLEVPGKL---LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGV  200 (786)
T ss_pred             ccCCchhhhhhcccCEeeeccceeecccCCcc---ccccCCCcccCCchhhcCCCCCCCccccchhHH
Confidence            48999999999999999999999976444432   223344567999999998875  4899999987

>KOG0591|consensus

Probab=99.43  E-value=9.5e-15  Score=75.65  Aligned_cols=64  Identities=17%  Similarity=0.129  Sum_probs=48.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+||.||.++.++.+|+.|||+++.+........ .... +..||+||.+.+.. ..++|+|+-|.
T Consensus       152 RDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~-S~VG-TPyYMSPE~i~~~~Y~~kSDiWslGC  216 (375)
T KOG0591|consen  152 RDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAH-SLVG-TPYYMSPERIHESGYNFKSDIWSLGC  216 (375)
T ss_pred             ccCcchheEEcCCCceeeccchhHhHhcchhHHHH-hhcC-CCcccCHHHHhcCCCCcchhHHHHHH
Confidence            48999999999999999999999987654431111 1112 33599999999877 56999998664

>KOG0663|consensus

Probab=99.43  E-value=3.8e-14  Score=74.66  Aligned_cols=64  Identities=19%  Similarity=0.089  Sum_probs=49.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i   66 (69)
                      .|+|+.|+|+...|.+|++|||+++......  .......++++|-|||.+.+..  .+..||||.|.
T Consensus       201 RDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGC  266 (419)
T KOG0663|consen  201 RDLKTSNLLLSHKGILKIADFGLAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGC  266 (419)
T ss_pred             cccchhheeeccCCcEEecccchhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHH
Confidence            4899999999999999999999999765442  1222334556677999999876  45899998863

>KOG1024|consensus

Probab=99.43  E-value=7.3e-15  Score=78.85  Aligned_cols=66  Identities=23%  Similarity=0.565  Sum_probs=57.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+.++|++++..-.+|+.|-.+++.+.+.++......+.-|++||+||.+.+.. ...+|+|+|||+
T Consensus       421 DiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVl  487 (563)
T KOG1024|consen  421 DIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVL  487 (563)
T ss_pred             hhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHH
Confidence            788999999999999999999999988888766555666699999999999877 568999999985

>KOG1187|consensus

Probab=99.41  E-value=8.7e-14  Score=74.24  Aligned_cols=65  Identities=14%  Similarity=0.137  Sum_probs=49.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccccc-CcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|||++.+...|++|||+++.... ........  .....|++||....+. ..++|+++|||+
T Consensus       201 rDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~--~gt~gY~~PEy~~~g~lt~KsDVySFGVv  267 (361)
T KOG1187|consen  201 RDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTV--MGTFGYLAPEYASTGKLTEKSDVYSFGVV  267 (361)
T ss_pred             CCCCHHHeeECCCCCEEccCccCcccCCccccceeeec--CCCCccCChhhhccCCcCcccccccchHH
Confidence            48999999999999999999999965443 22111110  2234599999998766 669999999985

>KOG0600|consensus

Probab=99.40  E-value=1.9e-13  Score=74.79  Aligned_cols=65  Identities=14%  Similarity=0.075  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~-~~~~~w~~~i   66 (69)
                      .|+|..|||++.++.+|+.|||+++.+..... .......++++|-+||.+.+.. | ..+|+|+-|.
T Consensus       242 RDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GC  308 (560)
T KOG0600|consen  242 RDIKGSNILIDNNGVLKIADFGLARFYTPSGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGC  308 (560)
T ss_pred             ccccccceEEcCCCCEEeccccceeeccCCCC-cccccceEEeeccChHHhcCCcccccceeehhhhH
Confidence            48999999999999999999999986554331 1122334456666999999866 3 4799998763

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.39  E-value=7.8e-14  Score=72.35  Aligned_cols=67  Identities=43%  Similarity=0.854  Sum_probs=48.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++................+..|+|||.+..+. ..++|+|++|+.
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  229 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT  229 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence            4899999999999999999999987544332222222223356799999987655 568999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0660|consensus

Probab=99.38  E-value=1.8e-13  Score=72.13  Aligned_cols=64  Identities=23%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEE-eccccccCC-C-CCCCceEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWM-AWESIVKVP-S-QDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-aPe~~~~~~-~-~~~~~w~~~   65 (69)
                      .|+||.|++++.+..+|++|||+++...... ....-...+..||. |||++.... + ...|+||-|
T Consensus       149 RDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvG  215 (359)
T KOG0660|consen  149 RDLKPSNLLLNADCDLKICDFGLARYLDKFF-EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVG  215 (359)
T ss_pred             cccchhheeeccCCCEEeccccceeeccccC-cccchhcceeeeeecCHHHHhccccccchhhhhhhh
Confidence            4899999999999999999999999764321 11111335556676 999998755 4 479999876

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.38  E-value=4.1e-13  Score=70.38  Aligned_cols=65  Identities=12%  Similarity=0.043  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++...........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       120 rDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  185 (325)
T cd05594         120 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK--TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  185 (325)
T ss_pred             cCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc--cccCCcccCCHHHHccCCCCCccccccccce
Confidence            48999999999999999999998864322211111  112235699999987655 568999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0986|consensus

Probab=99.37  E-value=1.2e-13  Score=75.10  Aligned_cols=63  Identities=14%  Similarity=0.039  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+||+|||++..++++++|+|++-.+.........   .++..|||||++.+..+ ...|.|+.|.
T Consensus       311 RDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~r---vGT~GYMAPEvl~ne~Y~~s~Dwf~lGC  374 (591)
T KOG0986|consen  311 RDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGR---VGTVGYMAPEVLQNEVYDFSPDWFSLGC  374 (591)
T ss_pred             ccCChhheeeccCCCeEeeccceEEecCCCCccccc---cCcccccCHHHHcCCcccCCccHHHHHh
Confidence            489999999999999999999999776654322211   22456999999998874 4677777664

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.36  E-value=1.8e-13  Score=71.37  Aligned_cols=67  Identities=28%  Similarity=0.424  Sum_probs=48.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++................+..|++||.+.... ..++|+|++|+.
T Consensus       133 ~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~  200 (316)
T cd05108         133 RDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT  200 (316)
T ss_pred             cccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHH
Confidence            4899999999999999999999997654322111111223356799999987655 568999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.35  E-value=3.5e-13  Score=71.99  Aligned_cols=67  Identities=31%  Similarity=0.562  Sum_probs=47.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.++.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvi  303 (374)
T cd05106         236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL  303 (374)
T ss_pred             ccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHH
Confidence            4899999999999999999999987543322111111122345699999987655 568999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.34  E-value=4.1e-13  Score=70.36  Aligned_cols=65  Identities=15%  Similarity=0.145  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++...........  ....+..|+|||++.... ..++|+|++|+.
T Consensus       125 rDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  190 (323)
T cd05616         125 RDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK--TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL  190 (323)
T ss_pred             cCCCHHHeEECCCCcEEEccCCCceecCCCCCccc--cCCCChhhcCHHHhcCCCCCCccchhchhHH
Confidence            48999999999999999999998864322111111  111234599999998765 568999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.34  E-value=5.9e-13  Score=69.78  Aligned_cols=65  Identities=12%  Similarity=0.051  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++..........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       119 rDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  184 (323)
T cd05571         119 RDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK--TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  184 (323)
T ss_pred             CCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc--ceecCccccChhhhcCCCCCccccCcccchh
Confidence            48999999999999999999998864322111101  111234599999998655 568999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.34  E-value=8.6e-13  Score=69.38  Aligned_cols=65  Identities=12%  Similarity=0.049  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++........  ......+..|+|||.+.... ...+|+|++|+.
T Consensus       119 rDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  184 (328)
T cd05593         119 RDLKLENLMLDKDGHIKITDFGLCKEGITDAAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  184 (328)
T ss_pred             cccCHHHeEECCCCcEEEecCcCCccCCCcccc--cccccCCcCccChhhhcCCCCCccCCccccchH
Confidence            489999999999999999999998643221111  11112234599999987655 568999999974

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0201|consensus

Probab=99.33  E-value=3.3e-13  Score=72.72  Aligned_cols=65  Identities=22%  Similarity=0.149  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|+++...+.+|+.|||++......... .. ...+...|||||++.... ..+.|+|+-||-
T Consensus       135 rDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r-r~-tfvGTPfwMAPEVI~~~~Y~~KADIWSLGIT  200 (467)
T KOG0201|consen  135 RDIKAANILLSESGDVKLADFGVAGQLTNTVKR-RK-TFVGTPFWMAPEVIKQSGYDTKADIWSLGIT  200 (467)
T ss_pred             ccccccceeEeccCcEEEEecceeeeeechhhc-cc-cccccccccchhhhccccccchhhhhhhhHH
Confidence            489999999999999999999998765443322 12 112233499999999644 569999998874

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.33  E-value=7.6e-13  Score=69.39  Aligned_cols=65  Identities=15%  Similarity=0.098  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++.......  .......+..|+|||.+.... ..++|+|++|+.
T Consensus       120 ~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  185 (325)
T cd05604         120 RDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAV  185 (325)
T ss_pred             cCCCHHHeEECCCCCEEEeecCCcccCCCCCC--CcccccCChhhCCHHHHcCCCCCCcCccccccce
Confidence            48999999999999999999999864322111  111112245699999998765 458999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0577|consensus

Probab=99.33  E-value=9e-13  Score=74.03  Aligned_cols=62  Identities=21%  Similarity=0.117  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~~   68 (69)
                      .|+|+.|||++..+.+|+.|||-+....+.+.   .   .++..|||||++..   +. ..++|+||.||-|
T Consensus       150 RDiKAGNILLse~g~VKLaDFGSAsi~~PAns---F---vGTPywMAPEVILAMDEGqYdgkvDvWSLGITC  215 (948)
T KOG0577|consen  150 RDIKAGNILLSEPGLVKLADFGSASIMAPANS---F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  215 (948)
T ss_pred             hhccccceEecCCCeeeeccccchhhcCchhc---c---cCCccccchhHheeccccccCCccceeeccchh
Confidence            48999999999999999999998875443321   1   11234999999984   34 3589999999865

>KOG0597|consensus

Probab=99.33  E-value=2.8e-13  Score=75.52  Aligned_cols=64  Identities=20%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      +|+||+||+++..+.+|+++||+++....+....... ...| .|||||.+.+..+ ..+|.|+.|.
T Consensus       124 rd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi-kGtP-lYmAPElv~e~pyd~~sDlWslGc  188 (808)
T KOG0597|consen  124 RDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI-KGTP-LYMAPELVEEQPYDHTSDLWSLGC  188 (808)
T ss_pred             ccCCcceeeecCCCceeechhhhhhhcccCceeeeec-cCcc-cccCHHHHcCCCccchhhHHHHHH
Confidence            5899999999999999999999999766543222221 1234 4999999997774 5899998664

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.33  E-value=1.7e-13  Score=75.50  Aligned_cols=67  Identities=19%  Similarity=0.173  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++................+..|+|||.+.... ..++|+|++|+.
T Consensus       167 rDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvi  234 (496)
T PTZ00283        167 RDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVL  234 (496)
T ss_pred             CCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999987543221111111112245699999998765 458999998864

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.32  E-value=1.8e-12  Score=66.85  Aligned_cols=66  Identities=27%  Similarity=0.548  Sum_probs=48.0

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.++................+..|++||.+.... ..++|+|++|+.
T Consensus       157 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  223 (293)
T cd05053         157 DLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL  223 (293)
T ss_pred             ccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhH
Confidence            799999999999999999999987544332221122222345699999877654 568999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.32  E-value=9.6e-13  Score=70.27  Aligned_cols=66  Identities=12%  Similarity=0.133  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++........... .....+..|+|||++....     ...+|+|++|+.
T Consensus       166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i  236 (370)
T cd05621         166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  236 (370)
T ss_pred             cCCCHHHEEECCCCCEEEEecccceecccCCceec-ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence            48999999999999999999999875432221111 1112345699999987531     357999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.32  E-value=8.9e-13  Score=69.14  Aligned_cols=65  Identities=14%  Similarity=0.092  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++..........  .......|+|||.+.... ..++|+|++|+.
T Consensus       120 rDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  185 (325)
T cd05602         120 RDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS--TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV  185 (325)
T ss_pred             cCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc--cccCCccccCHHHHcCCCCCCccccccccHH
Confidence            48999999999999999999999864322211111  111234699999988655 458999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.32  E-value=1.1e-12  Score=68.81  Aligned_cols=65  Identities=12%  Similarity=0.092  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........  .......+..|+|||.+.... ..++|+|++|+.
T Consensus       120 ~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  185 (323)
T cd05575         120 RDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAV  185 (323)
T ss_pred             CCCCHHHeEECCCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCccccccccchh
Confidence            48999999999999999999998864322211  111112234599999988655 457999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0615|consensus

Probab=99.32  E-value=1.4e-12  Score=70.15  Aligned_cols=64  Identities=14%  Similarity=0.096  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---C-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---S-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~-~~~~~w~~~i~   67 (69)
                      .|+||+|||+..+   ..+|+.|||++........-.+   .++++.|.|||++....   + .++|+||-|+.
T Consensus       300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~T---lCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcv  370 (475)
T KOG0615|consen  300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKT---LCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCV  370 (475)
T ss_pred             ccCCcceEEeccCCcceEEEecccchhhccccceehhh---hcCCccccChhheecCCeecccchheeeeccce
Confidence            5899999999876   7889999999986543322112   23345599999999744   2 36899998863

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.31  E-value=1.5e-12  Score=68.18  Aligned_cols=65  Identities=12%  Similarity=0.099  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++.........  ......+..|+|||.+.... ..+.|+|++|+.
T Consensus       120 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  185 (321)
T cd05603         120 RDLKPENILLDSQGHVVLTDFGLCKEGVEPEET--TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAV  185 (321)
T ss_pred             ccCCHHHeEECCCCCEEEccCCCCccCCCCCCc--cccccCCcccCCHHHhcCCCCCCcCcccccchh
Confidence            489999999999999999999988643222111  11112234699999987655 458999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.31  E-value=1.2e-12  Score=68.73  Aligned_cols=66  Identities=17%  Similarity=0.121  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++............ ....+..|+|||.+....  ...+|+|++|+.
T Consensus       129 rDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  196 (332)
T cd05614         129 RDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTY-SFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL  196 (332)
T ss_pred             cCCCHHHeEECCCCCEEEeeCcCCccccccCCCccc-cccCCccccCHHHhcCCCCCCCccccccchhh
Confidence            489999999999999999999998754322111111 112245699999987543  457999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=1.9e-12  Score=67.99  Aligned_cols=65  Identities=14%  Similarity=0.135  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++.........  ......+..|+|||.+....  ...+|+|++|+.
T Consensus       120 rDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvi  186 (330)
T cd05586         120 RDLKPENILLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVL  186 (330)
T ss_pred             ccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCccceeccccE
Confidence            489999999999999999999998643222111  11112245699999987543  457999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0696|consensus

Probab=99.31  E-value=3.6e-13  Score=73.14  Aligned_cols=64  Identities=16%  Similarity=0.127  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-cCcceecCCCcccceeEEeccccccCCCC-CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-AADYYDLGGKSALPIRWMAWESIVKVPSQ-DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~~~-~~~~w~~~i~   67 (69)
                      .|||..|++++..+.+|+.|||++..-. ......+   .++...|+|||++.+.++. .+|.|+|||+
T Consensus       474 RDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkT---FCGTPdYiAPEIi~YqPYgksvDWWa~GVL  539 (683)
T KOG0696|consen  474 RDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKT---FCGTPDYIAPEIIAYQPYGKSVDWWAFGVL  539 (683)
T ss_pred             eeccccceEeccCCceEeeecccccccccCCcceee---ecCCCcccccceEEecccccchhHHHHHHH
Confidence            4899999999999999999999986421 1111111   1334569999999998854 6888999986

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.31  E-value=9.2e-13  Score=70.38  Aligned_cols=67  Identities=31%  Similarity=0.543  Sum_probs=48.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.+..+++.|||++.................+..|++||.+.... ...+|+|++|+.
T Consensus       238 ~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~  305 (375)
T cd05104         238 RDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL  305 (375)
T ss_pred             cCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHH
Confidence            4899999999999999999999987543322111111223345699999998665 568999998864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.31  E-value=7e-13  Score=68.41  Aligned_cols=64  Identities=16%  Similarity=0.108  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++..........   ....+..|+|||.+.... ...+|+|++|+.
T Consensus       126 ~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi  190 (285)
T cd05631         126 RDLKPENILLDDRGHIRISDLGLAVQIPEGETVR---GRVGTVGYMAPEVINNEKYTFSPDWWGLGCL  190 (285)
T ss_pred             CCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec---CCCCCCCccCHhhhcCCCCCcccCchhHHHH
Confidence            4899999999999999999999987543222111   112245699999998655 557999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG1025|consensus

Probab=99.30  E-value=3.2e-13  Score=77.69  Aligned_cols=68  Identities=25%  Similarity=0.350  Sum_probs=54.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~~   68 (69)
                      .||.++|+|+.....+|+.|||++..+......-.....+.|+.|||-|.+..+.+ .++|+|+|||+.
T Consensus       822 rdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVti  890 (1177)
T KOG1025|consen  822 RDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTI  890 (1177)
T ss_pred             hhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhH
Confidence            37899999999999999999999987665532222334577899999999998775 489999999974

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.30  E-value=1.3e-12  Score=68.69  Aligned_cols=65  Identities=11%  Similarity=0.040  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++...........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       120 ~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  185 (329)
T cd05618         120 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS--TFCGTPNYIAPEILRGEDYGFSVDWWALGVL  185 (329)
T ss_pred             CCCCHHHEEECCCCCEEEeeCCccccccCCCCccc--cccCCccccCHHHHcCCCCCCccceecccHH
Confidence            48999999999999999999999864322111111  112234699999998665 458999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.30  E-value=5.9e-13  Score=70.25  Aligned_cols=67  Identities=28%  Similarity=0.529  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.++.+++.|||++..+..............+..|+|||.+.... ..++|+|++|+.
T Consensus       197 rDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~  264 (337)
T cd05054         197 RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVL  264 (337)
T ss_pred             CCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHH
Confidence            4899999999999999999999987643222111111122345699999887665 568999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.30  E-value=1.4e-12  Score=68.45  Aligned_cols=65  Identities=17%  Similarity=0.156  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++..........  .......|+|||.+.... ..++|+|++|+.
T Consensus       124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  189 (323)
T cd05584         124 RDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH--TFCGTIEYMAPEILMRSGHGKAVDWWSLGAL  189 (323)
T ss_pred             CCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc--ccCCCccccChhhccCCCCCCcceecccHHH
Confidence            48999999999999999999999864332221111  112235699999987655 468999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.30  E-value=4.4e-13  Score=68.79  Aligned_cols=67  Identities=39%  Similarity=0.752  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       148 ~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i  215 (283)
T cd05048         148 RDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV  215 (283)
T ss_pred             cccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHH
Confidence            3899999999999999999999987543322111111222345699999887655 557999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.30  E-value=7.4e-13  Score=69.28  Aligned_cols=65  Identities=15%  Similarity=0.138  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.........  ......+..|+|||.+.... ...+|+|++|+.
T Consensus       120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  185 (316)
T cd05592         120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK--ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVL  185 (316)
T ss_pred             CCCCHHHeEECCCCCEEEccCcCCeECCCCCCc--cccccCCccccCHHHHcCCCCCCcccchhHHHH
Confidence            489999999999999999999998653222111  11112234699999988655 458999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.29  E-value=1.5e-12  Score=66.43  Aligned_cols=67  Identities=21%  Similarity=0.618  Sum_probs=48.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.++................+..|++||.+.... ...+|+|++|+.
T Consensus       137 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i  204 (273)
T cd05035         137 RDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT  204 (273)
T ss_pred             cccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHH
Confidence            4899999999999999999999987554332221111122345699999987654 568999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=1.6e-12  Score=67.88  Aligned_cols=65  Identities=12%  Similarity=0.071  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++..........  .....+..|+|||.+.... ..++|+|++|+.
T Consensus       117 rDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi  182 (312)
T cd05585         117 RDLKPENILLDYQGHIALCDFGLCKLNMKDDDKT--NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVL  182 (312)
T ss_pred             CCCCHHHeEECCCCcEEEEECcccccCccCCCcc--ccccCCcccCCHHHHcCCCCCCccceechhHH
Confidence            4899999999999999999999986432221111  1111234599999998655 457999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.29  E-value=2.7e-12  Score=67.36  Aligned_cols=66  Identities=17%  Similarity=0.133  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||++..+......... ....+..|+|||.+..      .. ..++|+|++|+.
T Consensus       126 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i  198 (330)
T cd05601         126 RDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK-LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVI  198 (330)
T ss_pred             ccCchHheEECCCCCEEeccCCCCeECCCCCceeee-cccCCccccCHHHhccccccccCCCCCcceeecccce
Confidence            489999999999999999999998755433211111 1112346999999863      22 357999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.29  E-value=2.2e-12  Score=68.89  Aligned_cols=66  Identities=12%  Similarity=0.144  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++........... .....+..|+|||++....     ..++|+|++|+.
T Consensus       166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvi  236 (371)
T cd05622         166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  236 (371)
T ss_pred             CCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc-cCcccCccccCHHHHhccCCCccCCCccceeehhHH
Confidence            48999999999999999999999875433221111 1112345699999987431     357999999974

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.29  E-value=1e-12  Score=68.93  Aligned_cols=65  Identities=12%  Similarity=0.051  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       119 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  184 (323)
T cd05595         119 RDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  184 (323)
T ss_pred             cCCCHHHEEEcCCCCEEecccHHhccccCCCCccc--cccCCcCcCCcccccCCCCCchhchhhhHHH
Confidence            48999999999999999999998864322211101  111234599999987655 568999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.29  E-value=1.4e-12  Score=68.26  Aligned_cols=65  Identities=12%  Similarity=0.069  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++...........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       120 rDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  185 (321)
T cd05591         120 RDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT--TFCGTPDYIAPEILQELEYGPSVDWWALGVL  185 (321)
T ss_pred             cCCCHHHeEECCCCCEEEeecccceecccCCcccc--ccccCccccCHHHHcCCCCCCccceechhHH
Confidence            48999999999999999999998864322211111  112234699999987655 457999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0667|consensus

Probab=99.28  E-value=2.6e-12  Score=71.49  Aligned_cols=60  Identities=22%  Similarity=0.179  Sum_probs=43.3

Q ss_pred             CCcccceeEEcCC--CeEEEcccCcccccccCcceecCCCccccee-EEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG--YSIKISNFGVVRNLYAADYYDLGGKSALPIR-WMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~--~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      +||||+|||+...  ..+|++|||.+..... ..+.     .+..| |-|||++.+.+ ....||||+|.
T Consensus       313 cDLKPENILL~~~~r~~vKVIDFGSSc~~~q-~vyt-----YiQSRfYRAPEVILGlpY~~~IDmWSLGC  376 (586)
T KOG0667|consen  313 CDLKPENILLKDPKRSRIKVIDFGSSCFESQ-RVYT-----YIQSRFYRAPEVILGLPYDTAIDMWSLGC  376 (586)
T ss_pred             ccCChhheeeccCCcCceeEEecccccccCC-ccee-----eeeccccccchhhccCCCCCccceeehhh
Confidence            6999999999654  4779999999864322 2121     12223 56999999887 46899999874

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.28  E-value=2.7e-12  Score=68.11  Aligned_cols=67  Identities=19%  Similarity=0.158  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---------------------------------ecCCCcccceeEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---------------------------------DLGGKSALPIRWMA   47 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~a   47 (69)
                      .|+|+.||+++.++.+++.|||++.........                                 .......++..|+|
T Consensus       125 rDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A  204 (360)
T cd05627         125 RDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIA  204 (360)
T ss_pred             cCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccC
Confidence            489999999999999999999987643211000                                 00001123456999


Q ss_pred             ccccccCC-CCCCCceEEEEe
Q psy10556         48 WESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        48 Pe~~~~~~-~~~~~~w~~~i~   67 (69)
                      ||++.... ...+|+|++|+.
T Consensus       205 PE~~~~~~~~~~~DiwSlGvi  225 (360)
T cd05627         205 PEVFMQTGYNKLCDWWSLGVI  225 (360)
T ss_pred             HHHHcCCCCCCcceeccccce
Confidence            99988655 568999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.28  E-value=6e-13  Score=68.55  Aligned_cols=64  Identities=17%  Similarity=0.121  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||.+.......   .......+..|+|||.+.... ..++|+|++|+.
T Consensus       134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i  198 (290)
T cd07862         134 RDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI  198 (290)
T ss_pred             CCCCHHHEEEcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHH
Confidence            4899999999999999999999986543221   111112245699999987655 558999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0611|consensus

Probab=99.27  E-value=7.2e-13  Score=71.89  Aligned_cols=64  Identities=19%  Similarity=0.245  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCC--CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQ--DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~--~~~~w~~~i~   67 (69)
                      .|+|.+|||++.++.+|++|||++..+-..+...+..  ..|+ |.+||++.+..+.  .+|+|+.||+
T Consensus       177 RDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFC--GSPL-YASPEIvNG~PY~GPEVDsWsLGvL  242 (668)
T KOG0611|consen  177 RDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFC--GSPL-YASPEIVNGTPYKGPEVDSWSLGVL  242 (668)
T ss_pred             cccchhheeecCCCCeeeeccchhhhhccccHHHHhc--CCcc-cCCccccCCCCCCCCccchhhHHHH
Confidence            4899999999999999999999997654433322222  2244 9999999987754  6889988875

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.27  E-value=2e-12  Score=66.70  Aligned_cols=67  Identities=43%  Similarity=0.890  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++..+.+++.|||.++................+..|++||.+.... ...+|+|++|+.
T Consensus       154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  221 (296)
T cd05051         154 RDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT  221 (296)
T ss_pred             cccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence            4899999999999999999999987543332111111222345699999987654 568999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.27  E-value=1.6e-12  Score=66.64  Aligned_cols=67  Identities=39%  Similarity=0.753  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|+|||.+.... ...+|+|++|+.
T Consensus       146 ~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (280)
T cd05049         146 RDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV  213 (280)
T ss_pred             cccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHH
Confidence            4799999999999999999999987543322211112222345799999988666 457999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0579|consensus

Probab=99.27  E-value=9.7e-13  Score=74.58  Aligned_cols=64  Identities=20%  Similarity=0.166  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----C-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----P-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~-~~~~~~w~~~i   66 (69)
                      .|+|+.|||++.+|.+++.|||++-........ .. ...+...|||||+..+.     + .+.+|+|++||
T Consensus       154 RDLKAGNiL~TldGdirLADFGVSAKn~~t~qk-RD-sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI  223 (1187)
T KOG0579|consen  154 RDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK-RD-SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI  223 (1187)
T ss_pred             hhccccceEEEecCcEeeecccccccchhHHhh-hc-cccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence            489999999999999999999998543222111 11 11223459999998863     2 35899999997

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=3e-12  Score=67.32  Aligned_cols=62  Identities=18%  Similarity=0.138  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++.......     .....+..|+|||.+.... ...+|+|++|+.
T Consensus       125 ~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  187 (333)
T cd05600         125 RDLKPENFLIDASGHIKLTDFGLSKGIVTYA-----NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCM  187 (333)
T ss_pred             cCCCHHHEEECCCCCEEEEeCcCCccccccc-----CCcccCccccChhHhcCCCCCCccceecchHH
Confidence            4899999999999999999999987543211     1111234599999988665 568999999964

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.27  E-value=3.4e-12  Score=67.18  Aligned_cols=66  Identities=11%  Similarity=0.074  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++........... .....+..|+|||.+..     +. ...+|+|++|+.
T Consensus       126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi  197 (331)
T cd05624         126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS-SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC  197 (331)
T ss_pred             ccCchHHEEEcCCCCEEEEeccceeeccCCCceee-ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh
Confidence            48999999999999999999999865433221111 11123456999998864     22 457899999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.27  E-value=5.8e-13  Score=73.03  Aligned_cols=67  Identities=15%  Similarity=0.110  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++..+..............+..|+|||.+.... ..++|+|++|+.
T Consensus       193 rDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~  260 (478)
T PTZ00267        193 RDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVI  260 (478)
T ss_pred             CCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHH
Confidence            4899999999999999999999987643321111111112345699999987655 457899998864

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.27  E-value=1.6e-12  Score=68.17  Aligned_cols=65  Identities=11%  Similarity=0.033  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       120 ~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  185 (320)
T cd05590         120 RDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS--TFCGTPDYIAPEILQEMLYGPSVDWWAMGVL  185 (320)
T ss_pred             CCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc--ccccCccccCHHHHcCCCCCCccchhhhHHH
Confidence            48999999999999999999998864322211111  112245699999988655 457899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0658|consensus

Probab=99.26  E-value=2.8e-12  Score=67.85  Aligned_cols=61  Identities=23%  Similarity=0.141  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCccccee-EEeccccccCC--CCCCCceEEE
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIR-WMAWESIVKVP--SQDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~aPe~~~~~~--~~~~~~w~~~   65 (69)
                      +|+||.|+|++.+ +.+|++|||-+..+...+.-    ....-.| |-|||.+.+..  .++.|+||-|
T Consensus       149 RDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn----iSYicSRyYRaPELifga~~Yt~~IDiWSaG  213 (364)
T KOG0658|consen  149 RDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN----ISYICSRYYRAPELIFGATEYTTSIDIWSAG  213 (364)
T ss_pred             CCCChheEEEcCCCCeEEeccCCcceeeccCCCc----eeEEEeccccCHHHHcCccccCceeEEhhhh
Confidence            5999999999876 89999999999876543211    1111223 55999999866  4589999865

>KOG0614|consensus

Probab=99.26  E-value=3e-13  Score=74.63  Aligned_cols=64  Identities=14%  Similarity=0.060  Sum_probs=50.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||+|++++.++.+|+.|||++..+...+...+.   +++.-|.|||++.+.. ...+|.|+-|||
T Consensus       544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTF---cGTpEYVAPEIILnKGHD~avDyWaLGIl  608 (732)
T KOG0614|consen  544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTF---CGTPEYVAPEIILNKGHDRAVDYWALGIL  608 (732)
T ss_pred             ccCChhheeeccCCceEEeehhhHHHhccCCceeee---cCCcccccchhhhccCcchhhHHHHHHHH
Confidence            489999999999999999999999877655432232   2234599999999754 678999998876

>KOG4236|consensus

Probab=99.26  E-value=3.4e-12  Score=71.14  Aligned_cols=64  Identities=14%  Similarity=0.128  Sum_probs=48.4

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      ||+||+|+|+...   -.+|++|||.++.+..........+   ...|+|||++.... ....|||+.||.
T Consensus       688 CDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG---TPAYLaPEVLrnkGyNrSLDMWSVGVI  755 (888)
T KOG4236|consen  688 CDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG---TPAYLAPEVLRNKGYNRSLDMWSVGVI  755 (888)
T ss_pred             ccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC---CccccCHHHHhhccccccccceeeeEE
Confidence            6999999999765   4689999999998766543222221   23599999999755 457899999874

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.26  E-value=1.4e-12  Score=67.09  Aligned_cols=67  Identities=28%  Similarity=0.435  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++................+..|++||.+..+. ..++|+|++|+.
T Consensus       133 ~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  200 (279)
T cd05111         133 RNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVT  200 (279)
T ss_pred             cccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHH
Confidence            3899999999999999999999987543322111111122345699999987655 568999999864

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.26  E-value=2.7e-12  Score=67.91  Aligned_cols=62  Identities=19%  Similarity=0.240  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||++....... ..    ...+..|+|||.+.... ...+|+|++|+.
T Consensus       155 rDLkp~NILl~~~~~ikL~DFG~a~~~~~~~-~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  217 (340)
T PTZ00426        155 RDLKPENLLLDKDGFIKMTDFGFAKVVDTRT-YT----LCGTPEYIAPEILLNVGHGKAADWWTLGIF  217 (340)
T ss_pred             cCCCHHHEEECCCCCEEEecCCCCeecCCCc-ce----ecCChhhcCHHHHhCCCCCccccccchhhH
Confidence            4899999999999999999999987543221 11    11234599999987654 558999999974

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.25  E-value=2e-12  Score=67.93  Aligned_cols=65  Identities=12%  Similarity=0.058  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||++...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       120 rDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  185 (327)
T cd05617         120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS--TFCGTPNYIAPEILRGEEYGFSVDWWALGVL  185 (327)
T ss_pred             cCCCHHHEEEeCCCCEEEeccccceeccCCCCcee--cccCCcccCCHHHHCCCCCCchheeehhHHH
Confidence            48999999999999999999998864222111111  111234699999987655 458999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0592|consensus

Probab=99.25  E-value=1.4e-12  Score=71.93  Aligned_cols=66  Identities=15%  Similarity=0.128  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-----------ecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-----------DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+||+|||++.++++++.|||.+..+......           .......+.-.|.+||.+..+. ....|+|+||.
T Consensus       198 RDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGC  275 (604)
T KOG0592|consen  198 RDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGC  275 (604)
T ss_pred             ccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHH
Confidence            589999999999999999999998765432110           0001111234599999999877 66899998874

>KOG0599|consensus

Probab=99.25  E-value=9.7e-13  Score=68.38  Aligned_cols=63  Identities=21%  Similarity=0.161  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-------CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-------SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i   66 (69)
                      .|+|++|||++.+..+++.|||++..+...+.....   ++...|+|||++....       ...+|.|+.||
T Consensus       147 RDLKpENILlddn~~i~isDFGFa~~l~~GekLrel---CGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GV  216 (411)
T KOG0599|consen  147 RDLKPENILLDDNMNIKISDFGFACQLEPGEKLREL---CGTPGYLAPETIKCSMYENHPGYSKEVDEWACGV  216 (411)
T ss_pred             cccChhheeeccccceEEeccceeeccCCchhHHHh---cCCCcccChhheeeecccCCCCccchhhHHHHHH
Confidence            489999999999999999999998766555433222   2234599999998633       23688998775

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.25  E-value=1.1e-12  Score=67.32  Aligned_cols=67  Identities=34%  Similarity=0.732  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|+|||.+.... ...+|+|++|+.
T Consensus       143 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  210 (277)
T cd05062         143 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  210 (277)
T ss_pred             CCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence            4899999999999999999999886543322211111122245699999987655 557999998864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.25  E-value=4.5e-12  Score=67.72  Aligned_cols=67  Identities=19%  Similarity=0.218  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---ce------------------------------------------ec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---YY------------------------------------------DL   35 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---~~------------------------------------------~~   35 (69)
                      .|+|+.||+++.++.++++|||++..+....   ..                                          ..
T Consensus       125 rDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (382)
T cd05625         125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCL  204 (382)
T ss_pred             CCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccc
Confidence            4899999999999999999999875321000   00                                          00


Q ss_pred             CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556         36 GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        36 ~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .....++..|+|||++.... ...+|+|++|+.
T Consensus       205 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  237 (382)
T cd05625         205 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  237 (382)
T ss_pred             ccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence            00112345699999987655 568999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.25  E-value=1.7e-12  Score=69.01  Aligned_cols=67  Identities=19%  Similarity=0.193  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc---e------------------------------ecCCCcccceeEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY---Y------------------------------DLGGKSALPIRWMA   47 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~---~------------------------------~~~~~~~~~~~~~a   47 (69)
                      .|+|+.||+++.++.++++|||++........   .                              .......++..|+|
T Consensus       125 rDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~a  204 (363)
T cd05628         125 RDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIA  204 (363)
T ss_pred             cCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccC
Confidence            48999999999999999999998864321100   0                              00001123456999


Q ss_pred             ccccccCC-CCCCCceEEEEe
Q psy10556         48 WESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        48 Pe~~~~~~-~~~~~~w~~~i~   67 (69)
                      ||++.... ...+|+|++|+.
T Consensus       205 PE~~~~~~~~~~~DvwSlGvi  225 (363)
T cd05628         205 PEVFMQTGYNKLCDWWSLGVI  225 (363)
T ss_pred             HHHHcCCCCCCchhhhhhHHH
Confidence            99997655 568999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.25  E-value=2.5e-12  Score=67.43  Aligned_cols=65  Identities=12%  Similarity=0.091  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++..........  ........|+|||.+.+.. ..++|+|++|+.
T Consensus       125 rdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  190 (324)
T cd05589         125 RDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT--STFCGTPEFLAPEVLTETSYTRAVDWWGLGVL  190 (324)
T ss_pred             cCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc--cccccCccccCHhHhcCCCCCcccchhhHHHH
Confidence            4899999999999999999999886432221111  1111234599999988655 457999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=4.8e-12  Score=66.74  Aligned_cols=67  Identities=18%  Similarity=0.197  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---------------------------ceecCCCcccceeEEecccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---------------------------YYDLGGKSALPIRWMAWESIVK   53 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~aPe~~~~   53 (69)
                      .|+++.||+++.++.+++.|||++.......                           ..........+..|+|||.+..
T Consensus       125 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (350)
T cd05573         125 RDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG  204 (350)
T ss_pred             cCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence            4899999999999999999999886543221                           0000111122346999999987


Q ss_pred             CC-CCCCCceEEEEe
Q psy10556         54 VP-SQDGPSQSYRIF   67 (69)
Q Consensus        54 ~~-~~~~~~w~~~i~   67 (69)
                      .. ...+|+|++|+.
T Consensus       205 ~~~~~~~DiwSlG~i  219 (350)
T cd05573         205 TPYGLECDWWSLGVI  219 (350)
T ss_pred             CCCCCceeeEecchh
Confidence            65 568999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.25  E-value=1.8e-12  Score=68.71  Aligned_cols=64  Identities=17%  Similarity=0.128  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||+++.......   ......+..|+|||.+.+.. ..++|+|++|+.
T Consensus       147 rDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i  211 (359)
T cd07876         147 RDLKPSNIVVKSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  211 (359)
T ss_pred             CCCCHHHEEECCCCCEEEecCCCccccccCcc---CCCCcccCCCCCchhccCCCCCcchhhHHHHHH
Confidence            48999999999999999999999875432211   11112234599999998655 558999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.24  E-value=1.7e-12  Score=68.04  Aligned_cols=65  Identities=17%  Similarity=0.154  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       125 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  190 (324)
T cd05587         125 RDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR--TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL  190 (324)
T ss_pred             cCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee--eecCCccccChhhhcCCCCCcccchhhhHHH
Confidence            48999999999999999999998864221111111  111234599999998765 457899999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.24  E-value=2.2e-12  Score=67.86  Aligned_cols=62  Identities=15%  Similarity=0.185  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........ ..    ..+..|+|||.+.... ..++|+|++|+.
T Consensus       142 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~----~gt~~y~aPE~~~~~~~~~~~DiwslG~i  204 (329)
T PTZ00263        142 RDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-TL----CGTPEYLAPEVIQSKGHGKAVDWWTMGVL  204 (329)
T ss_pred             cCCCHHHEEECCCCCEEEeeccCceEcCCCcc-ee----cCChhhcCHHHHcCCCCCCcceeechHHH
Confidence            48999999999999999999999875433221 11    1234599999998665 568999999864

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.24  E-value=2e-12  Score=67.68  Aligned_cols=65  Identities=15%  Similarity=0.124  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||+++..........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       120 rDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  185 (316)
T cd05620         120 RDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS--TFCGTPDYIAPEILQGLKYTFSVDWWSFGVL  185 (316)
T ss_pred             cCCCHHHeEECCCCCEEeCccCCCeecccCCCcee--ccCCCcCccCHHHHcCCCCCcccchhhhHHH
Confidence            48999999999999999999998864221110011  111234699999998655 458999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.24  E-value=3.1e-12  Score=66.18  Aligned_cols=67  Identities=45%  Similarity=0.883  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|+|||.+..+. ..++|+|++|+.
T Consensus       153 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~  220 (295)
T cd05097         153 RDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVT  220 (295)
T ss_pred             cccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHH
Confidence            3799999999999999999999987543322221222222355699999887655 568999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0574|consensus

Probab=99.24  E-value=3.9e-13  Score=70.71  Aligned_cols=66  Identities=23%  Similarity=0.222  Sum_probs=49.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~~   68 (69)
                      .|+|+.|||++..+..|+.|||++..+....+. +..--..|. |||||++..-. .+..|+|+.||-+
T Consensus       153 RDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK-RNTVIGTPF-WMAPEVI~EIGY~~~ADIWSLGITa  219 (502)
T KOG0574|consen  153 RDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK-RNTVIGTPF-WMAPEVIEEIGYDTKADIWSLGITA  219 (502)
T ss_pred             hhcccccEEEcccchhhhhhccccchhhhhHHh-hCccccCcc-cccHHHHHHhccchhhhHhhhcchh
Confidence            489999999999999999999999876543221 111112244 99999998754 5689999998743

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.24  E-value=1.2e-12  Score=67.29  Aligned_cols=66  Identities=45%  Similarity=0.701  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+|+.|++++.++.+|+.|||+++................+..|+|||.+..+. ...+|+|++|+
T Consensus       148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  214 (283)
T cd05091         148 KDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV  214 (283)
T ss_pred             cccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence            3899999999999999999999987543322111111122245699999987655 55799999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.24  E-value=2.3e-12  Score=66.88  Aligned_cols=67  Identities=27%  Similarity=0.543  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       161 ~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  228 (304)
T cd05101         161 RDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL  228 (304)
T ss_pred             cccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHH
Confidence            3899999999999999999999987553322111111222345699999987655 458999998863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.24  E-value=1.9e-12  Score=67.55  Aligned_cols=67  Identities=28%  Similarity=0.540  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++................+..|++||.+.... ...+|+|++|+.
T Consensus       158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~  225 (314)
T cd05099         158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGIL  225 (314)
T ss_pred             ccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHH
Confidence            4899999999999999999999987543322111111112234599999987655 458999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.24  E-value=3e-12  Score=69.12  Aligned_cols=67  Identities=31%  Similarity=0.507  Sum_probs=47.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       261 ~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvi  328 (400)
T cd05105         261 RDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL  328 (400)
T ss_pred             CCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHH
Confidence            4899999999999999999999987543322111111122345699999987655 568999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.24  E-value=2e-12  Score=67.86  Aligned_cols=65  Identities=17%  Similarity=0.176  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||++............  ...+..|+|||.+.... ...+|+|++|+.
T Consensus       125 rDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  190 (323)
T cd05615         125 RDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT--FCGTPDYIAPEIIAYQPYGKSVDWWAYGVL  190 (323)
T ss_pred             cCCCHHHeEECCCCCEEEeccccccccCCCCccccC--ccCCccccCHHHHcCCCCCCccchhhhHHH
Confidence            489999999999999999999988653222111111  11234699999988655 458999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.24  E-value=2e-12  Score=66.75  Aligned_cols=67  Identities=39%  Similarity=0.737  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       144 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i  211 (288)
T cd05093         144 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV  211 (288)
T ss_pred             cccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHH
Confidence            4799999999999999999999987543322111121222244699999987655 557999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.23  E-value=4.9e-12  Score=67.54  Aligned_cols=66  Identities=14%  Similarity=0.138  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++......... .......+..|+|||.+....     ..++|+|++|+.
T Consensus       166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi  236 (370)
T cd05596         166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  236 (370)
T ss_pred             cCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence            489999999999999999999998754322111 111112345699999986432     357999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.23  E-value=1.5e-12  Score=66.86  Aligned_cols=66  Identities=29%  Similarity=0.460  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++.++.+++.|||.++................+..|++||.+.... ...+|+|++|+
T Consensus       133 ~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~  199 (279)
T cd05109         133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGV  199 (279)
T ss_pred             cccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHH
Confidence            3899999999999999999999987553222111111122345699999987655 45899999885

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.23  E-value=3.6e-12  Score=67.06  Aligned_cols=65  Identities=12%  Similarity=0.043  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||++...........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       120 ~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~  185 (329)
T cd05588         120 RDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS--TFCGTPNYIAPEILRGEDYGFSVDWWALGVL  185 (329)
T ss_pred             cCCCHHHeEECCCCCEEECcCccccccccCCCccc--cccCCccccCHHHHcCCCCCCccceechHHH
Confidence            48999999999999999999998864221111001  111234699999998755 458999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.23  E-value=5.2e-12  Score=67.55  Aligned_cols=67  Identities=19%  Similarity=0.227  Sum_probs=45.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---cee------------------------------------------c
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---YYD------------------------------------------L   35 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---~~~------------------------------------------~   35 (69)
                      .|+|+.||+++.++.+++.|||++..+....   ...                                          .
T Consensus       125 rDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (381)
T cd05626         125 RDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCL  204 (381)
T ss_pred             cCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccc
Confidence            4899999999999999999999875321000   000                                          0


Q ss_pred             CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556         36 GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        36 ~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .....++..|+|||.+.... ...+|+|++|+.
T Consensus       205 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i  237 (381)
T cd05626         205 AHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI  237 (381)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence            00112345699999987655 458999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.23  E-value=5.3e-12  Score=66.44  Aligned_cols=66  Identities=12%  Similarity=0.081  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.++.+++.|||++........... .....+..|+|||++..     .. ...+|+|++|+.
T Consensus       126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvi  197 (332)
T cd05623         126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVC  197 (332)
T ss_pred             cCCCHHHEEECCCCCEEEeecchheecccCCccee-cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHH
Confidence            48999999999999999999998865432211111 11122456999999862     22 457999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.23  E-value=4.8e-12  Score=65.42  Aligned_cols=66  Identities=41%  Similarity=0.799  Sum_probs=47.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||++.................+..|++||.+.... ..++|+|++|+.
T Consensus       148 dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  214 (291)
T cd05094         148 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI  214 (291)
T ss_pred             ccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence            799999999999999999999986543322111111222245699999887655 457999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.22  E-value=4.6e-12  Score=64.86  Aligned_cols=67  Identities=36%  Similarity=0.730  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++................+..|+|||.+.... ..++|+|++|+.
T Consensus       143 ~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  210 (277)
T cd05032         143 RDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV  210 (277)
T ss_pred             cccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence            3799999999999999999999887544332211111122345699999987655 567999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.22  E-value=1.6e-12  Score=69.73  Aligned_cols=67  Identities=13%  Similarity=-0.013  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++..+.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi  276 (392)
T PHA03207        209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLV  276 (392)
T ss_pred             cCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHH
Confidence            4899999999999999999999986543322111111112245699999998665 458999998863

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.22  E-value=1.1e-12  Score=71.93  Aligned_cols=67  Identities=18%  Similarity=0.017  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++.................+..|++||.+.+.. ..++|+|++|+.
T Consensus       284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGvi  351 (461)
T PHA03211        284 RDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLV  351 (461)
T ss_pred             CcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHH
Confidence            4899999999999999999999986543221111111112345699999998765 457899998864

>KOG0575|consensus

Probab=99.22  E-value=4e-12  Score=70.60  Aligned_cols=63  Identities=17%  Similarity=0.099  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-cceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|||..|++++.+..+|+.|||++-..... +...+.   +++.-|.|||++.... ...+|+||-|+
T Consensus       142 RDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~Tl---CGTPNYIAPEVl~k~gHsfEvDiWSlGc  206 (592)
T KOG0575|consen  142 RDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTL---CGTPNYIAPEVLNKSGHSFEVDIWSLGC  206 (592)
T ss_pred             cccchhheeecCcCcEEecccceeeeecCccccccee---cCCCcccChhHhccCCCCCchhhhhhhh
Confidence            489999999999999999999999765422 212222   2234599999998543 67999998775

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.21  E-value=1.1e-12  Score=68.03  Aligned_cols=67  Identities=9%  Similarity=0.056  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---e--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---D--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||+++.+......   .  .......+..|++||...... ..++|+||+|+.
T Consensus       150 rDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~  222 (294)
T PHA02882        150 GDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYC  222 (294)
T ss_pred             CCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHH
Confidence            589999999999999999999998755322100   0  000112345689999887655 457999998863

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=9.1e-12  Score=66.48  Aligned_cols=67  Identities=21%  Similarity=0.260  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---ce---------e---------------------------------c
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---YY---------D---------------------------------L   35 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---~~---------~---------------------------------~   35 (69)
                      .|+|+.||+++.++.+++.|||++..+....   ..         .                                 .
T Consensus       125 rDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (377)
T cd05629         125 RDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLM  204 (377)
T ss_pred             cCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc
Confidence            4899999999999999999999885321100   00         0                                 0


Q ss_pred             CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556         36 GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        36 ~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .....++..|+|||++.... ...+|+|++|+.
T Consensus       205 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         205 AYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence            00012345699999987655 468999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.21  E-value=5.7e-12  Score=66.29  Aligned_cols=67  Identities=27%  Similarity=0.537  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.++................+..|++||.+.... ..++|+|++|+.
T Consensus       158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  225 (334)
T cd05100         158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL  225 (334)
T ss_pred             cccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHH
Confidence            3899999999999999999999987543322111111222245699999987655 568999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.21  E-value=1.7e-12  Score=68.73  Aligned_cols=64  Identities=17%  Similarity=0.134  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||+++........   .....+..|+|||.+.+.. ..++|+|++|+.
T Consensus       143 rDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i  207 (355)
T cd07874         143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  207 (355)
T ss_pred             CCCChHHEEECCCCCEEEeeCcccccCCCcccc---CCccccCCccCHHHHcCCCCCchhhHHHHHHH
Confidence            489999999999999999999998754322111   1112234599999987655 458999998863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.21  E-value=8.3e-12  Score=66.59  Aligned_cols=67  Identities=18%  Similarity=0.171  Sum_probs=45.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC---cc--------------------------------------eecCCCc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA---DY--------------------------------------YDLGGKS   39 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~---~~--------------------------------------~~~~~~~   39 (69)
                      .|+|+.||+++.++.++++|||++..+...   ..                                      .......
T Consensus       125 rDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (376)
T cd05598         125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSL  204 (376)
T ss_pred             CCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccccccc
Confidence            489999999999999999999986422100   00                                      0000001


Q ss_pred             ccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556         40 ALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        40 ~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .+...|+|||++.... ..++|+|++|+.
T Consensus       205 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  233 (376)
T cd05598         205 VGTPNYIAPEVLLRTGYTQLCDWWSVGVI  233 (376)
T ss_pred             CCCccccCHHHHcCCCCCcceeeeeccce
Confidence            1234599999998655 458999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG2052|consensus

Probab=99.21  E-value=1.7e-12  Score=70.39  Aligned_cols=66  Identities=18%  Similarity=0.159  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-cceecCC-CcccceeEEeccccccCC-------CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYDLGG-KSALPIRWMAWESIVKVP-------SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i   66 (69)
                      .|+|++|||+..++.|-+.|+|++-..... +...... ...++.||||||++.+..       +...|+|+||+
T Consensus       340 RDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgL  414 (513)
T KOG2052|consen  340 RDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGL  414 (513)
T ss_pred             cccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence            489999999999999999999998544322 1111111 234457899999998632       23588888874

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.21  E-value=3.6e-12  Score=65.59  Aligned_cols=64  Identities=17%  Similarity=0.177  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.........   .....+..|+|||.+.... ..++|+|++|+.
T Consensus       132 ~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~  196 (288)
T cd07863         132 RDLKPENILVTSGGQVKLADFGLARIYSCQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI  196 (288)
T ss_pred             CCCCHHHEEECCCCCEEECccCccccccCcccC---CCccccccccCchHhhCCCCCCcchhhhHHHH
Confidence            389999999999999999999998754322111   1111234599999987655 568999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=4.7e-12  Score=66.66  Aligned_cols=66  Identities=14%  Similarity=0.098  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++..+......... ....+..|+|||++..     .. ..++|+|++|+.
T Consensus       126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~  197 (331)
T cd05597         126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN-VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVC  197 (331)
T ss_pred             CCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc-ceeccccccCHHHHhhccccccCCCCcceeehhhhH
Confidence            489999999999999999999998654332211111 1122456999999863     12 347899999874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.21  E-value=2.6e-12  Score=67.27  Aligned_cols=65  Identities=17%  Similarity=0.150  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++...........  ....+..|+|||.+.+.. ..++|+|++|+.
T Consensus       120 rdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i  185 (316)
T cd05619         120 RDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC--TFCGTPDYIAPEILLGQKYNTSVDWWSFGVL  185 (316)
T ss_pred             CCCCHHHEEECCCCCEEEccCCcceECCCCCCcee--eecCCccccCHHHHcCCCCCchhhhhhHHHH
Confidence            48999999999999999999998864322111001  111234699999988655 568999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.20  E-value=5.5e-12  Score=65.32  Aligned_cols=67  Identities=43%  Similarity=0.885  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+..+..............+..|++||....+. ..++|+|++|+.
T Consensus       154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~  221 (296)
T cd05095         154 RDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVT  221 (296)
T ss_pred             ccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHH
Confidence            4799999999999999999999987543322111111122355699999876655 568999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0664|consensus

Probab=99.20  E-value=2e-12  Score=67.36  Aligned_cols=64  Identities=19%  Similarity=0.105  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-C-CCCCceEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-S-QDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~-~~~~~w~~~   65 (69)
                      .|+|+.|++++.+..+|++|||+++.....+.. ....+.+.-.|.|||++.+.. + ...|+|+.|
T Consensus       180 RDIKPGNLLVNSNCvLKICDFGLARvee~d~~~-hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG  245 (449)
T KOG0664|consen  180 RDIKPGNLLVNSNCILKICDFGLARTWDQRDRL-NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVG  245 (449)
T ss_pred             ccCCCccEEeccCceEEecccccccccchhhhh-hhHHHHHHHHhccHHHhhcchhhcCccceehhh
Confidence            489999999999999999999999865433211 122223333477999999866 3 478999876

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.20  E-value=1.1e-11  Score=64.92  Aligned_cols=65  Identities=17%  Similarity=0.216  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++...........  .......|++||.+.... ..++|+|++|+.
T Consensus       122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  187 (318)
T cd05582         122 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVL  187 (318)
T ss_pred             CCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee--cccCChhhcCHHHHcCCCCCCccceeccceE
Confidence            38999999999999999999998865432211111  111234599999987654 558999999874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.20  E-value=1.8e-12  Score=71.58  Aligned_cols=66  Identities=9%  Similarity=-0.048  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++..+...... .......+..|++||.+.... ....|+|++|+.
T Consensus       291 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  357 (501)
T PHA03210        291 RDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI  357 (501)
T ss_pred             CCCCHHHEEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH
Confidence            489999999999999999999999765432211 111112245699999998655 457999998864

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.20  E-value=2.8e-12  Score=66.86  Aligned_cols=67  Identities=13%  Similarity=0.032  Sum_probs=44.7

Q ss_pred             CCcccceeEE----cCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV----HAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~----~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|++||++    +..+.+|+.|||+++....... .........+..|+|||.+.+..  ...+|+|++|+.
T Consensus       132 rDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  205 (317)
T cd07868         132 RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  205 (317)
T ss_pred             CCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHH
Confidence            4899999999    4557899999999975432211 01111112244599999987643  457899998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.20  E-value=5.6e-12  Score=64.84  Aligned_cols=67  Identities=37%  Similarity=0.620  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+..+++.|||++.................+..|++||.+.... ...+|+|++|+.
T Consensus       148 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  215 (283)
T cd05090         148 KDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV  215 (283)
T ss_pred             hccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence            3799999999999999999999987543322111111222345699999987554 568999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.20  E-value=3.2e-12  Score=66.91  Aligned_cols=65  Identities=15%  Similarity=0.107  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||+++..........  .......|+|||.+.+.. ..++|+|++|+.
T Consensus       120 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwslGvi  185 (318)
T cd05570         120 RDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS--TFCGTPDYIAPEILSYQPYGPAVDWWALGVL  185 (318)
T ss_pred             cCCCHHHeEECCCCcEEecccCCCeecCcCCCccc--ceecCccccCHHHhcCCCCCcchhhhhHHHH
Confidence            48999999999999999999998864222111111  111234599999998655 458999999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=9e-12  Score=66.13  Aligned_cols=67  Identities=21%  Similarity=0.232  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc---ee---------------------------------cCCCccccee
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY---YD---------------------------------LGGKSALPIR   44 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~---~~---------------------------------~~~~~~~~~~   44 (69)
                      .|+|+.||+++.++.++++|||++..+.....   ..                                 .......+..
T Consensus       125 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  204 (364)
T cd05599         125 RDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPD  204 (364)
T ss_pred             ccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCcc
Confidence            48999999999999999999998764321100   00                                 0000113456


Q ss_pred             EEeccccccCC-CCCCCceEEEEe
Q psy10556         45 WMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        45 ~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+|||++.... ...+|+|++|+.
T Consensus       205 y~aPE~~~~~~~~~~~DiwSlG~i  228 (364)
T cd05599         205 YIAPEVFLQTGYNKECDWWSLGVI  228 (364)
T ss_pred             ccCHHHHcCCCCCCeeeeecchhH
Confidence            99999987655 568999999964

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.20  E-value=2.2e-12  Score=68.54  Aligned_cols=64  Identities=17%  Similarity=0.133  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||+++........ .  ....+..|+|||.+.+.. ..++|+|++|+.
T Consensus       150 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~-~--~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i  214 (364)
T cd07875         150 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-T--PYVVTRYYRAPEVILGMGYKENVDIWSVGCI  214 (364)
T ss_pred             CCCCHHHEEECCCCcEEEEeCCCccccCCCCcc-c--CCcccCCcCCHHHHhCCCCCchhhHHhHHHH
Confidence            489999999999999999999999754322111 1  111234599999998755 457999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.19  E-value=3.3e-12  Score=65.72  Aligned_cols=66  Identities=41%  Similarity=0.831  Sum_probs=47.1

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||++.................+..|++||.+.... ..++|+|++|+.
T Consensus       147 dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (280)
T cd05092         147 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV  213 (280)
T ss_pred             cccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence            789999999999999999999986543322111111222245699999887655 567999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0666|consensus

Probab=99.19  E-value=5.4e-12  Score=66.52  Aligned_cols=65  Identities=15%  Similarity=0.048  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCC----CeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CC-CCCceEEE
Q psy10556          1 MAESTKNCLVHAG----YSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQ-DGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~----~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~-~~~~w~~~   65 (69)
                      .|+||.||++..+    +.+|+.|+|+++.+-..-. .-......++++|-|||.+.+.+ ++ ..|+|+-|
T Consensus       156 RDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiG  227 (438)
T KOG0666|consen  156 RDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIG  227 (438)
T ss_pred             ccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHH
Confidence            4899999999887    8999999999997643311 00111223456677999999877 44 78889654

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.19  E-value=1.4e-12  Score=67.75  Aligned_cols=65  Identities=11%  Similarity=0.089  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||.+........  .......+..|+|||++....  ...+|+|++|+.
T Consensus       127 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  193 (303)
T cd07869         127 RDLKPQNLLISDTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI  193 (303)
T ss_pred             CCCCHHHEEECCCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHH
Confidence            48999999999999999999998864322111  111112234599999886533  446899998864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.19  E-value=4e-12  Score=65.44  Aligned_cols=66  Identities=17%  Similarity=0.177  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........... .....+..|+|||.+.+.. ....|+|++|+.
T Consensus       124 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi  190 (287)
T cd07848         124 RDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY-TEYVATRWYRSPELLLGAPYGKAVDMWSVGCI  190 (287)
T ss_pred             CCCCHHHEEEcCCCcEEEeeccCcccccccccccc-cccccccccCCcHHHcCCCCCCchhHHhHHHH
Confidence            48999999999999999999999876432211111 1111234599999987655 558999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.18  E-value=3.1e-12  Score=65.31  Aligned_cols=67  Identities=22%  Similarity=0.617  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.++.+++.|||.++................+..|++||...... ....|+|++|+.
T Consensus       136 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i  203 (272)
T cd05075         136 RDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT  203 (272)
T ss_pred             cccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence            3899999999999999999999987654332211111222345699999987655 558999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.18  E-value=4.3e-12  Score=65.36  Aligned_cols=65  Identities=15%  Similarity=0.058  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..+........  ....+..|+|||.+.+.. ..+.|+|++|+.
T Consensus       121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i  186 (280)
T cd05608         121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK--GYAGTPGFMAPELLQGEEYDFSVDYFALGVT  186 (280)
T ss_pred             CCCCHHHEEECCCCCEEEeeCccceecCCCCcccc--ccCCCcCccCHHHhcCCCCCccccHHHHHHH
Confidence            48999999999999999999999865433221111  111234599999998766 458999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.18  E-value=4e-12  Score=65.63  Aligned_cols=67  Identities=36%  Similarity=0.749  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||+++................+..|++||.+..+. ..++|+|++|+.
T Consensus       143 ~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~  210 (288)
T cd05061         143 RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV  210 (288)
T ss_pred             CCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence            3799999999999999999999987543322111111112245699999987655 557999998864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.17  E-value=8.2e-12  Score=63.72  Aligned_cols=66  Identities=29%  Similarity=0.454  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+||.+....... ..... ....+..|++||.+.... ...+|+|++|+.
T Consensus       130 ~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~  197 (266)
T cd05033         130 RDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK-GGKIPIRWTAPEAIAYRKFTSASDVWSFGIV  197 (266)
T ss_pred             CCCCcceEEEcCCCCEEECccchhhcccccccceecc-CCCCCccccChhhhccCCCccccchHHHHHH
Confidence            3799999999999999999999987654221 11111 223355799999987655 458999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.17  E-value=4e-12  Score=66.16  Aligned_cols=67  Identities=27%  Similarity=0.536  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|++||.+.... ...+|+|++|+.
T Consensus       164 ~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~  231 (307)
T cd05098         164 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL  231 (307)
T ss_pred             ccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHH
Confidence            3799999999999999999999986543222111111112234699999887655 568999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.16  E-value=3e-12  Score=66.55  Aligned_cols=67  Identities=27%  Similarity=0.406  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+|+.|||.++................+..|++||.+.... ..++|+|++|+.
T Consensus       133 ~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~  200 (303)
T cd05110         133 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT  200 (303)
T ss_pred             cccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHH
Confidence            3799999999999999999999987543222111111122345699999887655 457999999863

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.16  E-value=2.8e-12  Score=66.26  Aligned_cols=65  Identities=11%  Similarity=0.108  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|++||+++.++.+|+.|||++........  .......+..|+|||.+.+..  ...+|+|++|+.
T Consensus       127 ~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~  193 (288)
T cd07871         127 RDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCI  193 (288)
T ss_pred             CCCCHHHEEECCCCCEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHH
Confidence            48999999999999999999999865332211  111112244699999886533  457999998853

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.16  E-value=3.6e-12  Score=68.59  Aligned_cols=65  Identities=15%  Similarity=-0.012  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+|+.||+++..+.++++|||++........ ........+..|+|||.+.... ...+|+|++|+
T Consensus       206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  271 (391)
T PHA03212        206 RDIKAENIFINHPGDVCLGDFGAACFPVDINA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGI  271 (391)
T ss_pred             CCCChHhEEEcCCCCEEEEeCCcccccccccc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHH
Confidence            48999999999999999999999864221110 0111112234589999987655 45799999885

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.16  E-value=1.4e-11  Score=63.23  Aligned_cols=67  Identities=27%  Similarity=0.417  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|++||.+.... ....|+|++|+.
T Consensus       133 ~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  200 (279)
T cd05057         133 RDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVT  200 (279)
T ss_pred             cccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHH
Confidence            3799999999999999999999987544322111111222345699999887555 568999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.16  E-value=4.4e-12  Score=66.04  Aligned_cols=67  Identities=13%  Similarity=0.032  Sum_probs=44.9

Q ss_pred             CCcccceeEE----cCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV----HAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~----~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||++    +.++.++++|||+++....... .........+..|+|||.+....  ...+|+|++|+.
T Consensus       132 ~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i  205 (317)
T cd07867         132 RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  205 (317)
T ss_pred             CCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHH
Confidence            4899999999    4567899999999975432211 01111112245699999987543  457899998863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.16  E-value=9.6e-12  Score=63.01  Aligned_cols=67  Identities=30%  Similarity=0.501  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.++................+..|++||.+..+. ..++|+|++|+.
T Consensus       118 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  185 (252)
T cd05084         118 RDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL  185 (252)
T ss_pred             cccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHH
Confidence            3789999999999999999999987543221111111112345699999987655 557999998753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.16  E-value=6.7e-12  Score=66.70  Aligned_cols=64  Identities=16%  Similarity=0.049  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++..+.++++|||.++.........   ....+..|+|||.+.... ..++|+|++|+.
T Consensus       181 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvv  245 (357)
T PHA03209        181 RDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL---GLAGTVETNAPEVLARDKYNSKADIWSAGIV  245 (357)
T ss_pred             CCCCHHHEEECCCCCEEEecCccccccccCcccc---cccccccccCCeecCCCCCCchhhHHHHHHH
Confidence            4899999999999999999999986432211111   111234599999988655 568999998853

>PHA02988 hypothetical protein; Provisional

Probab=99.14  E-value=6.4e-12  Score=64.97  Aligned_cols=62  Identities=15%  Similarity=0.225  Sum_probs=45.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc--CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK--VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+|+.+||+++.......     .......|+|||.+..  .. ..++|+||+|+.
T Consensus       147 rdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvi  211 (283)
T PHA02988        147 KNLTSVSFLVTENYKLKIICHGLEKILSSPPF-----KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVV  211 (283)
T ss_pred             CcCChhhEEECCCCcEEEcccchHhhhccccc-----cccCcccccCHHHhhhccccccchhhhhHHHHH
Confidence            47999999999999999999999875432211     1111345999999875  23 568999999864

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.14  E-value=1.2e-11  Score=63.09  Aligned_cols=67  Identities=31%  Similarity=0.411  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++....... ..........+..|++||.+.... ...+|+|++|+.
T Consensus       119 ~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05115         119 RDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGIT  187 (257)
T ss_pred             cccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHH
Confidence            3899999999999999999999987543221 111111222245699999887655 558999998863

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.14  E-value=1.4e-11  Score=65.19  Aligned_cols=67  Identities=27%  Similarity=0.515  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|++||.+.... ..++|+|++|+.
T Consensus       203 ~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  270 (343)
T cd05103         203 RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  270 (343)
T ss_pred             CCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHH
Confidence            4899999999999999999999987543221111111122345699999887655 458999998853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.14  E-value=4.7e-11  Score=61.54  Aligned_cols=67  Identities=19%  Similarity=0.352  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++....... .........+..|+|||.+.+.. ..++|+|++|+.
T Consensus       133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i  201 (284)
T cd05079         133 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVT  201 (284)
T ss_pred             cccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhh
Confidence            37999999999999999999999875543221 11111112244589999887655 568999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.13  E-value=4.1e-12  Score=66.64  Aligned_cols=67  Identities=18%  Similarity=0.075  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEecccccc--CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVK--VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~--~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.......... .......+..|+|||.+..  .. ..++|+|++|+.
T Consensus       127 ~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvv  197 (338)
T cd07859         127 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI  197 (338)
T ss_pred             CCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHH
Confidence            4899999999999999999999987532211000 0011112345899998764  22 457999998864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.13  E-value=1.4e-11  Score=63.29  Aligned_cols=67  Identities=28%  Similarity=0.587  Sum_probs=47.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+||+++.+..............+..|++||.+.... ...+|+|++|+.
T Consensus       141 ~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~  208 (280)
T cd05043         141 KDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVL  208 (280)
T ss_pred             cccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH
Confidence            3789999999999999999999987654332211111122345699999887654 568999998853

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.13  E-value=1.8e-11  Score=62.57  Aligned_cols=66  Identities=29%  Similarity=0.558  Sum_probs=45.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC--------CCCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV--------PSQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--------~~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+.................+..|+|||.+...        ...++|+|++|+.
T Consensus       125 dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  198 (269)
T cd05087         125 DLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVT  198 (269)
T ss_pred             ccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHH
Confidence            79999999999999999999988643322221111112234569999988632        1347899998853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.13  E-value=2.5e-11  Score=62.97  Aligned_cols=64  Identities=27%  Similarity=0.377  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++..++.|||++......   ........+..|++||...... ..++|+|++|+.
T Consensus       143 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i  207 (297)
T cd05089         143 RDLAARNVLVGENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL  207 (297)
T ss_pred             CcCCcceEEECCCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHH
Confidence            489999999999999999999988642211   0111112345699999887655 568999999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG3653|consensus

Probab=99.13  E-value=2.1e-11  Score=66.63  Aligned_cols=55  Identities=22%  Similarity=0.150  Sum_probs=42.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP   55 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~   55 (69)
                      .|+|.+|+|+..+.++.++|||++..+.............++.||||||++.+..
T Consensus       340 RDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgai  394 (534)
T KOG3653|consen  340 RDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAI  394 (534)
T ss_pred             ccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhc
Confidence            5899999999999999999999998766443222222344567999999998754

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.12  E-value=5.4e-12  Score=65.15  Aligned_cols=67  Identities=31%  Similarity=0.586  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||+++................+..|++||.+.... ...+|+|++|+.
T Consensus       151 ~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~  218 (290)
T cd05045         151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVL  218 (290)
T ss_pred             hhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHH
Confidence            3789999999999999999999987543322111111223345699999877554 557999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.12  E-value=1e-11  Score=65.80  Aligned_cols=65  Identities=25%  Similarity=0.193  Sum_probs=44.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++..+......  .........|++||.+....      ..++|+|++|+.
T Consensus       192 rDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi  262 (353)
T PLN00034        192 RDIKPSNLLINSAKNVKIADFGVSRILAQTMDP--CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS  262 (353)
T ss_pred             cCCCHHHEEEcCCCCEEEcccccceeccccccc--ccccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence            489999999999999999999998754322110  01112235699999875321      136899999864

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.12  E-value=2.1e-11  Score=62.75  Aligned_cols=67  Identities=19%  Similarity=0.335  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ .........+..|++||.+.... ..++|+|++|+.
T Consensus       131 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~  199 (283)
T cd05080         131 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVT  199 (283)
T ss_pred             cccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHH
Confidence            37999999999999999999999875432211 11111122345699999887655 568999998854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.12  E-value=1.1e-12  Score=66.92  Aligned_cols=66  Identities=23%  Similarity=0.393  Sum_probs=47.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +++++||+++.++.+|+.+||+..................+..|++||.+.... ..++|+|+||+.
T Consensus       128 ~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~  194 (259)
T PF07714_consen  128 NLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML  194 (259)
T ss_dssp             T-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            688999999999999999999987653322222233334456799999998766 558999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=6.3e-12  Score=65.09  Aligned_cols=62  Identities=19%  Similarity=0.211  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++....... ...    .....|+|||.+.... ..++|+|++|+.
T Consensus       125 ~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~-~~~----~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  187 (291)
T cd05612         125 RDLKPENILLDKEGHIKLTDFGFAKKLRDRT-WTL----CGTPEYLAPEVIQSKGHNKAVDWWALGIL  187 (291)
T ss_pred             cCCCHHHeEECCCCCEEEEecCcchhccCCc-ccc----cCChhhcCHHHHcCCCCCchhhHHHHHHH
Confidence            4899999999999999999999987543221 111    1234599999988655 557999998864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.12  E-value=1.4e-11  Score=62.61  Aligned_cols=66  Identities=29%  Similarity=0.361  Sum_probs=46.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.++....... .........+..|++||.+.... ..++|+|++|+.
T Consensus       120 di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05060         120 DLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT  187 (257)
T ss_pred             CcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHH
Confidence            7999999999999999999999875433221 11111112234699999887655 458999998864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.12  E-value=9.6e-12  Score=65.45  Aligned_cols=63  Identities=21%  Similarity=0.125  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........  .  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       128 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~--~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  191 (331)
T cd06649         128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--N--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLS  191 (331)
T ss_pred             CCCChhhEEEcCCCcEEEccCccccccccccc--c--cCCCCcCcCCHhHhcCCCCCchHhHHHHHHH
Confidence            48999999999999999999999875432211  1  111234699999998655 458999998863

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.11  E-value=7.4e-12  Score=66.73  Aligned_cols=66  Identities=17%  Similarity=0.094  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++......... .......+..|+|||.+.+..  ....|+|++|+.
T Consensus       127 ~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  194 (372)
T cd07853         127 RDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCI  194 (372)
T ss_pred             CCCChHHEEECCCCCEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHH
Confidence            489999999999999999999998754322111 111112234599999987643  357899999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.11  E-value=8.3e-12  Score=63.78  Aligned_cols=67  Identities=27%  Similarity=0.464  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-------C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-------P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-------~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|++++.++.+++.|||++.................+..|+|||++...       . ..+.|+|++|+.
T Consensus       124 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  198 (269)
T cd05042         124 SDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVT  198 (269)
T ss_pred             ccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHH
Confidence            389999999999999999999998653322211111222234569999987531       1 347999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.11  E-value=1.7e-11  Score=66.24  Aligned_cols=67  Identities=30%  Similarity=0.494  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++....+++.|||+++................+..|++||.+.... ....|+|++|+.
T Consensus       263 rdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvi  330 (401)
T cd05107         263 RDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGIL  330 (401)
T ss_pred             ccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHH
Confidence            4899999999999999999999987543221111111122345699999987655 457999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.11  E-value=2.1e-11  Score=62.79  Aligned_cols=64  Identities=17%  Similarity=0.077  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++............   ..+..|+|||.+.... ...+|+|++|+.
T Consensus       119 ~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DvwslGv~  183 (277)
T cd05607         119 RDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQR---AGTNGYMAPEILKEEPYSYPVDWFAMGCS  183 (277)
T ss_pred             ccCChHhEEEcCCCCEEEeeceeeeecCCCceeecc---CCCCCccCHHHHccCCCCCchhHHHHHHH
Confidence            379999999999999999999988654332211111   1234699999988665 558999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.11  E-value=1.6e-11  Score=63.94  Aligned_cols=67  Identities=31%  Similarity=0.574  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+..+++.|||.+.................+..|++||.+.... ...+|+|++|+.
T Consensus       165 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi  232 (302)
T cd05055         165 RDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL  232 (302)
T ss_pred             hhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHH
Confidence            3789999999999999999999987544322111111112244699999887655 568999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0193|consensus

Probab=99.11  E-value=1.9e-11  Score=68.35  Aligned_cols=67  Identities=19%  Similarity=0.188  Sum_probs=44.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i~   67 (69)
                      .|||..||++..+..++|.|||++..-...........-...+-|||||++....    ...+||++||+.
T Consensus       512 rDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV  582 (678)
T KOG0193|consen  512 RDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIV  582 (678)
T ss_pred             hhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHH
Confidence            3899999999999999999999875321111000000011124599999998532    358999999873

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.11  E-value=2.5e-11  Score=62.13  Aligned_cols=67  Identities=18%  Similarity=0.472  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC--------CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV--------PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--------~~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.................+..|++||.+...        ...+.|+|++|+.
T Consensus       123 ~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  197 (268)
T cd05086         123 SDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT  197 (268)
T ss_pred             cCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence            489999999999999999999987532221111111112234569999987531        1346899998863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.11  E-value=1.7e-11  Score=62.65  Aligned_cols=67  Identities=24%  Similarity=0.642  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+..+++.|||.++................+..|++||.+.... ...+|+|++|+.
T Consensus       137 ~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i  204 (273)
T cd05074         137 RDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVT  204 (273)
T ss_pred             cccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHH
Confidence            4899999999999999999999887543322111111222344589999887655 557999998853

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.11  E-value=1.3e-11  Score=62.74  Aligned_cols=67  Identities=25%  Similarity=0.681  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||+++.........  .......+..|+|||...... ..+.|+|++|+.
T Consensus       122 ~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  191 (262)
T cd05058         122 RDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  191 (262)
T ss_pred             cccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHH
Confidence            4799999999999999999999987543221111  111122345699999887554 558999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.10  E-value=2.2e-11  Score=62.97  Aligned_cols=64  Identities=14%  Similarity=0.101  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++..........   ....+..|+|||.+.... ..++|+|++|+.
T Consensus       126 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~  190 (285)
T cd05630         126 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPDWWALGCL  190 (285)
T ss_pred             CCCCHHHEEECCCCCEEEeeccceeecCCCcccc---CCCCCccccChHHHcCCCCCCccccHHHHHH
Confidence            3799999999999999999999886543222111   112245699999998665 457999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.10  E-value=1.6e-11  Score=62.48  Aligned_cols=67  Identities=24%  Similarity=0.368  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++....... .........+..|++||.+.... ....|+|++|+.
T Consensus       119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05116         119 RDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVL  187 (257)
T ss_pred             cccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHH
Confidence            37999999999999999999999875433221 11111222345699999887554 458999998854

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.9e-11  Score=61.57  Aligned_cols=66  Identities=24%  Similarity=0.374  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.++++|||++........ ........+..|++||.+.... ..++|+|++|+.
T Consensus       127 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  193 (261)
T cd05068         127 RDLAARNVLVGENNICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGIL  193 (261)
T ss_pred             ccCCcceEEEcCCCCEEECCcceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHH
Confidence            37999999999999999999999876542221 1111222345699999887655 558999998753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.10  E-value=2.6e-11  Score=64.01  Aligned_cols=62  Identities=16%  Similarity=0.073  Sum_probs=45.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++.......   .  ....+..|+|||.+....  ..++|+|++|+.
T Consensus       142 rdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  205 (343)
T cd07878         142 RDLKPSNVAVNEDCELRILDFGLARQADDEM---T--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             ccCChhhEEECCCCCEEEcCCccceecCCCc---C--CccccccccCchHhcCCccCCchhhhHhHHHH
Confidence            4899999999999999999999987543221   1  111234589999987632  457999998863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.10  E-value=4.3e-11  Score=62.32  Aligned_cols=64  Identities=30%  Similarity=0.435  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.......   .......+..|++||.+.... ...+|+|++|+.
T Consensus       148 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  212 (303)
T cd05088         148 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  212 (303)
T ss_pred             cccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhH
Confidence            4799999999999999999999886321111   111112245699999887655 568999999964

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.10  E-value=3.8e-11  Score=61.08  Aligned_cols=66  Identities=26%  Similarity=0.372  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||.+.... ....|+|++|+.
T Consensus       127 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  193 (261)
T cd05072         127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL  193 (261)
T ss_pred             cccchhhEEecCCCcEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHH
Confidence            378999999999999999999998754332211 111122345699999987655 457999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.10  E-value=8.4e-12  Score=64.34  Aligned_cols=67  Identities=39%  Similarity=0.719  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|++||.+.... ..++|+|++|+.
T Consensus       154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  221 (288)
T cd05050         154 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVV  221 (288)
T ss_pred             ccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHH
Confidence            3789999999999999999999887543322111111222345699999887655 457999998864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=3.2e-11  Score=62.28  Aligned_cols=64  Identities=14%  Similarity=0.092  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++..........   ....+..|++||.+.... ....|+|++|+.
T Consensus       126 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~  190 (285)
T cd05605         126 RDLKPENILLDDYGHIRISDLGLAVEIPEGETIR---GRVGTVGYMAPEVVKNERYTFSPDWWGLGCL  190 (285)
T ss_pred             cCCCHHHEEECCCCCEEEeeCCCceecCCCCccc---cccCCCCccCcHHhcCCCCCccccchhHHHH
Confidence            3799999999999999999999987543222111   112234699999987655 457899999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.10  E-value=8.4e-12  Score=68.01  Aligned_cols=64  Identities=17%  Similarity=0.131  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++ .+|++|||+++.+........   ...+..|+|||.+.+..  ...+|+|++|+.
T Consensus       194 rDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  260 (440)
T PTZ00036        194 RDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVS---YICSRFYRAPELMLGATNYTTHIDLWSLGCI  260 (440)
T ss_pred             CCcCHHHEEEcCCCCceeeeccccchhccCCCCccc---CCCCcCccCHHHhcCCCCCCcHHHHHHHHHH
Confidence            48999999998664 699999999975433221111   11234599999886532  457999998864

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.4e-11  Score=61.46  Aligned_cols=67  Identities=30%  Similarity=0.462  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.................+..|++||.+..+. ...+|+|++|+.
T Consensus       117 ~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i  184 (251)
T cd05041         117 RDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGIL  184 (251)
T ss_pred             hhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHH
Confidence            3789999999999999999999887543211111111112245699999987655 568999998753

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.09  E-value=2.4e-11  Score=61.48  Aligned_cols=66  Identities=36%  Similarity=0.631  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|++||.+.... ...+|+|++|+
T Consensus       129 ~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  195 (262)
T cd00192         129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGV  195 (262)
T ss_pred             CccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHH
Confidence            3799999999999999999999987654332111111222345699999887654 56899998875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.09  E-value=2.6e-11  Score=61.86  Aligned_cols=66  Identities=24%  Similarity=0.448  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||.+.... ...+|+|++|+.
T Consensus       128 ~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  194 (263)
T cd05052         128 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL  194 (263)
T ss_pred             cccCcceEEEcCCCcEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHH
Confidence            379999999999999999999998754332211 111112244699999887655 557999998853

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0587|consensus

Probab=99.09  E-value=8.5e-11  Score=67.89  Aligned_cols=66  Identities=24%  Similarity=0.188  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC------CCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS------QDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~------~~~~~w~~~i~~   68 (69)
                      .|+|..|||++.++.+|+.|||++..+.... ..+......| -|||||++.....      ...|+|+-||-.
T Consensus       147 RDikG~NiLLT~e~~VKLvDFGvSaQldsT~-grRnT~iGtP-~WMAPEViac~e~~d~tyd~R~D~WsLGITa  218 (953)
T KOG0587|consen  147 RDIKGQNVLLTENAEVKLVDFGVSAQLDSTV-GRRNTFIGTP-YWMAPEVIACDESPDATYDYRSDLWSLGITA  218 (953)
T ss_pred             ecccCceEEEeccCcEEEeeeeeeeeeeccc-ccccCcCCCc-ccccceeeecccCCCCCcccccchhhcccee
Confidence            4889999999999999999999997655432 1122122223 4999999997431      367888887743

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.08  E-value=1.5e-11  Score=63.16  Aligned_cols=67  Identities=31%  Similarity=0.655  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++   .+++.|||.++................+..|++||.+.... ..++|+|++|+.
T Consensus       140 ~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i  210 (277)
T cd05036         140 RDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL  210 (277)
T ss_pred             cccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence            47999999998654   68999999987653222111111112244699999987655 568999998853

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0662|consensus

Probab=99.08  E-value=7.9e-11  Score=58.44  Aligned_cols=62  Identities=15%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-cceecCCCcccceeEEeccccccCC--CCCCCceEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~   65 (69)
                      .|+||+|+++..++.+|+.|||+++-+... ++++   .+.+.++|.+|.++.+.+  .+..|+|+-|
T Consensus       125 rdlkpqnllin~ngelkladfglarafgipvrcys---aevvtlwyrppdvlfgakly~tsidmwsag  189 (292)
T KOG0662|consen  125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS---AEVVTLWYRPPDVLFGAKLYSTSIDMWSAG  189 (292)
T ss_pred             ccCCcceEEeccCCcEEecccchhhhcCCceEeee---ceeeeeeccCcceeeeeehhccchHhhhcc
Confidence            489999999999999999999999977644 3332   334556667999998876  4578899765

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.08  E-value=3.7e-11  Score=61.54  Aligned_cols=64  Identities=30%  Similarity=0.435  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.......   .......+..|++||.+.... ..++|+|++|+.
T Consensus       136 ~dikp~nili~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i  200 (270)
T cd05047         136 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  200 (270)
T ss_pred             cccccceEEEcCCCeEEECCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHH
Confidence            4899999999999999999999885322110   111112245699999887655 458999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.07  E-value=2.8e-11  Score=61.20  Aligned_cols=66  Identities=32%  Similarity=0.495  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++........ ........+..|++||.+.... ..+.|+|++|+.
T Consensus       117 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~l  183 (250)
T cd05085         117 RDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGIL  183 (250)
T ss_pred             cccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHH
Confidence            47999999999999999999998864322211 1111112245699999987655 558999998853

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.07  E-value=4.7e-11  Score=61.43  Aligned_cols=67  Identities=28%  Similarity=0.439  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++....... ..........+..|++||.+.+.. ....|+|++|+.
T Consensus       132 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  200 (284)
T cd05081         132 RDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVV  200 (284)
T ss_pred             ccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHH
Confidence            3799999999999999999999987543321 111111112234589999987655 457999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.07  E-value=2.6e-11  Score=61.84  Aligned_cols=67  Identities=34%  Similarity=0.691  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCC-----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+.     .+++.|||++.................+..|++||.+..+. ..++|+|++|+.
T Consensus       130 ~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  202 (269)
T cd05044         130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVL  202 (269)
T ss_pred             CCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHH
Confidence            37899999998877     89999999887543322111111112235699999988665 568999998854

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PTZ00284 protein kinase; Provisional

Probab=99.07  E-value=1.5e-11  Score=67.27  Aligned_cols=62  Identities=10%  Similarity=0.043  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCC----------------eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceE
Q psy10556          1 MAESTKNCLVHAGY----------------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQS   63 (69)
Q Consensus         1 ~dl~~~nil~~~~~----------------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~   63 (69)
                      .|||+.||+++..+                .+|+.|||.+.......   .  ....+..|+|||++.+.. ...+|+|+
T Consensus       256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~---~--~~~gt~~Y~APE~~~~~~~~~~~DiwS  330 (467)
T PTZ00284        256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR---T--AIVSTRHYRSPEVVLGLGWMYSTDMWS  330 (467)
T ss_pred             CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc---c--cccCCccccCcHHhhcCCCCcHHHHHH
Confidence            48999999998654                48999999875322111   0  112234699999998765 45789999


Q ss_pred             EEEe
Q psy10556         64 YRIF   67 (69)
Q Consensus        64 ~~i~   67 (69)
                      +|+.
T Consensus       331 lGvi  334 (467)
T PTZ00284        331 MGCI  334 (467)
T ss_pred             HHHH
Confidence            9864

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.06  E-value=5.5e-11  Score=60.42  Aligned_cols=66  Identities=23%  Similarity=0.444  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|+|||.+.... ...+|+|++|+.
T Consensus       124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~  190 (256)
T cd05114         124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVL  190 (256)
T ss_pred             cccCcceEEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHH
Confidence            378999999999999999999988754322211 111222345699999987554 568999998854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.06  E-value=6.4e-11  Score=60.18  Aligned_cols=62  Identities=24%  Similarity=0.435  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++......     .....+..|++||.+.... ...+|+|++|+.
T Consensus       126 ~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  188 (256)
T cd05082         126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL  188 (256)
T ss_pred             cccchheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHH
Confidence            4799999999999999999999887533221     1112245699999887654 457999998853

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.05  E-value=2.8e-11  Score=61.81  Aligned_cols=67  Identities=27%  Similarity=0.353  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+..+++.|||.+........ .........+..|++||.+.... ..+.|+|++|+.
T Consensus       131 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~i  199 (268)
T cd05063         131 RDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV  199 (268)
T ss_pred             cccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHH
Confidence            37899999999999999999998875432211 11111122345699999887655 568999998854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG4717|consensus

Probab=99.05  E-value=5.7e-11  Score=66.32  Aligned_cols=63  Identities=13%  Similarity=0.080  Sum_probs=48.8

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEE
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i   66 (69)
                      .|+||+|+.+. .-+.+|+.|||++..+.+.+...   ..++.+.|.|||++.+..|  ..+|+|+.||
T Consensus       142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~---TsCGSLAYSAPEILLGDsYDAPAVDiWSLGV  207 (864)
T KOG4717|consen  142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT---TSCGSLAYSAPEILLGDSYDAPAVDIWSLGV  207 (864)
T ss_pred             ccCCcceeEEeeecCceEeeeccccccCCCcchhh---cccchhhccCchhhhcCccCCcchhhhHHHH
Confidence            48999998875 55899999999998876665332   2344567999999998764  4799998876

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.05  E-value=3e-11  Score=61.41  Aligned_cols=65  Identities=23%  Similarity=0.441  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++.++.+++.|||.++........ .......+..|++||.+.... ..++|+|++|+
T Consensus       124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~  189 (256)
T cd05059         124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGV  189 (256)
T ss_pred             ccccHhhEEECCCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHH
Confidence            378999999999999999999988754332211 111112245699999987655 45799999885

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.05  E-value=4.5e-11  Score=67.04  Aligned_cols=51  Identities=22%  Similarity=0.189  Sum_probs=33.4

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccc
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV   52 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~   52 (69)
                      .|+|+.||+++. ++.+|++|||++..+.....+... .......|+|||.+.
T Consensus       279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~-~~~~t~~Y~APE~~~  330 (566)
T PLN03225        279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPK-EFLLDPRYAAPEQYI  330 (566)
T ss_pred             CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCc-ccccCCCccChHHhh
Confidence            589999999986 578999999999754322111111 111234699999654

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.05  E-value=5.4e-11  Score=60.39  Aligned_cols=66  Identities=23%  Similarity=0.380  Sum_probs=46.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+....... .+........+..|++||.+.... ..++|+|++|+.
T Consensus       122 di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~  189 (257)
T cd05040         122 DLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT  189 (257)
T ss_pred             ccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence            789999999999999999999987654321 111111122345699999887655 457999998753

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.05  E-value=4.5e-11  Score=61.75  Aligned_cols=64  Identities=14%  Similarity=0.102  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+..........   ....+..|++||.+.... ...+|+|++|+.
T Consensus       126 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~---~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~  190 (285)
T cd05632         126 RDLKPENILLDDYGHIRISDLGLAVKIPEGESIR---GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCL  190 (285)
T ss_pred             cCCCHHHEEECCCCCEEEecCCcceecCCCCccc---CCCCCcCccChHHhcCCCCCcccchHHHHHH
Confidence            3799999999999999999999886543221111   112345699999987655 457899998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.04  E-value=5.3e-11  Score=60.60  Aligned_cols=66  Identities=26%  Similarity=0.387  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|+|||...... ...+|+|++|+.
T Consensus       126 ~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  192 (260)
T cd05070         126 RDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  192 (260)
T ss_pred             CCCccceEEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHH
Confidence            479999999999999999999998754332211 111122355699999887555 458999998753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0585|consensus

Probab=99.04  E-value=5.2e-11  Score=65.37  Aligned_cols=66  Identities=17%  Similarity=0.067  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---ceecCCCcccceeEEeccccccCC-----CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---YYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i   66 (69)
                      .|+||.|+|++.++++|+.|||.+..+....   .........++..++|||.+..+.     ....|+|+-||
T Consensus       234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV  307 (576)
T KOG0585|consen  234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV  307 (576)
T ss_pred             cccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence            4899999999999999999999997552221   000111112234599999999733     24688998775

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.04  E-value=2.5e-11  Score=64.04  Aligned_cols=62  Identities=21%  Similarity=0.142  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+|+.|++++.++.+++.|||++........  .  ....+..|+|||.+.+.. ...+|+|++|+
T Consensus       128 ~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~--~~~~~~~y~aPE~~~~~~~~~~~DvwslG~  190 (333)
T cd06650         128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--N--SFVGTRSYMSPERLQGTHYSVQSDIWSMGL  190 (333)
T ss_pred             cCCChhhEEEcCCCCEEEeeCCcchhhhhhcc--c--cCCCCccccCHHHhcCCCCCcHHHHHHHHH
Confidence            37999999999999999999998865432110  0  111234599999987655 45799999885

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0612|consensus

Probab=99.04  E-value=5.5e-11  Score=70.19  Aligned_cols=66  Identities=15%  Similarity=0.115  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----CC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----PS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~~-~~~~~w~~~i~   67 (69)
                      .|+||.|+|++..|++|++|||-+..+........... .+++.|.+||++...     .| ...|.|+.|||
T Consensus       199 RDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~a-VGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~  270 (1317)
T KOG0612|consen  199 RDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVA-VGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF  270 (1317)
T ss_pred             ccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccc-cCCCCccCHHHHHhhcCCccccCCccchhhhHHH
Confidence            48999999999999999999999876553322222222 234579999999852     22 36889999987

>KOG0580|consensus

Probab=99.04  E-value=1.7e-11  Score=62.41  Aligned_cols=64  Identities=13%  Similarity=0.051  Sum_probs=49.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~~   68 (69)
                      .|+||+|+|++..+.+|++|||.+-.-..++    ....+.++.|.+||+..+.. ...+|+|+-||++
T Consensus       148 RdiKpenlLlg~~~~lkiAdfGwsV~~p~~k----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~  212 (281)
T KOG0580|consen  148 RDIKPENLLLGSAGELKIADFGWSVHAPSNK----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLC  212 (281)
T ss_pred             CCCCHHHhccCCCCCeeccCCCceeecCCCC----ceeeecccccCCHhhcCCCCccchhhHHHHHHHH
Confidence            4899999999999999999999986433222    11224567899999998765 5689999888765

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.04  E-value=5.6e-11  Score=60.69  Aligned_cols=66  Identities=23%  Similarity=0.348  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||...... ...+|+|++|+.
T Consensus       126 ~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~  192 (262)
T cd05071         126 RDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  192 (262)
T ss_pred             cccCcccEEEcCCCcEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHH
Confidence            479999999999999999999988754332211 111122345699999887555 558999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.03  E-value=1.4e-10  Score=58.87  Aligned_cols=64  Identities=17%  Similarity=0.177  Sum_probs=46.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+............  ...+..|+|||.+.... ...+|+|++|+.
T Consensus       125 dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i  189 (255)
T cd08219         125 DIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT--YVGTPYYVPPEIWENMPYNNKSDIWSLGCI  189 (255)
T ss_pred             CCCcceEEECCCCcEEEcccCcceeeccccccccc--ccCCccccCHHHHccCCcCchhhhhhhchh
Confidence            78999999999999999999998754332211111  11234599999987654 568999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.03  E-value=3.7e-11  Score=61.47  Aligned_cols=65  Identities=23%  Similarity=0.258  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++.++.+++.+||.............. ....+..|+|||.+.... ...+|+|++|+
T Consensus       131 ~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  196 (266)
T cd05064         131 KGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM-SGKSPVLWAAPEAIQYHHFSSASDVWSFGI  196 (266)
T ss_pred             ccccHhhEEEcCCCcEEECCCcccccccccchhccc-CCCCceeecCHHHHhhCCccchhHHHHHHH
Confidence            489999999999999999999976543222111111 112234699999987655 45899999885

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.02  E-value=8.7e-11  Score=60.06  Aligned_cols=67  Identities=28%  Similarity=0.352  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........ .........+..|++||.+.... ....|+|++|+.
T Consensus       130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  198 (267)
T cd05066         130 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  198 (267)
T ss_pred             hhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence            37899999999999999999999875443211 11111112234699999988655 568999998854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.01  E-value=1.3e-10  Score=67.08  Aligned_cols=25  Identities=4%  Similarity=-0.112  Sum_probs=20.3

Q ss_pred             eeEEeccccccCC-CCCCCceEEEEe
Q psy10556         43 IRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        43 ~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      ..|||||.+.... ..++|+|++|+.
T Consensus       179 ~~Y~APE~~~~~~~~~~sDVwSlGvi  204 (793)
T PLN00181        179 SWYTSPEEDNGSSSNCASDVYRLGVL  204 (793)
T ss_pred             cceEChhhhccCCCCchhhhhhHHHH
Confidence            4599999988765 568999999874

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.01  E-value=1.9e-10  Score=58.79  Aligned_cols=67  Identities=30%  Similarity=0.405  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc---eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY---YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.+..+++.|||++........   .........+..|++||.+.... ...+|+|++|+.
T Consensus       130 ~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~  200 (269)
T cd05065         130 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  200 (269)
T ss_pred             cccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHH
Confidence            37899999999999999999998864432211   11111112245699999987655 458999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.00  E-value=6.3e-11  Score=60.33  Aligned_cols=65  Identities=25%  Similarity=0.495  Sum_probs=46.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.++....... ........+..|++||...... ..++|+|++|+.
T Consensus       125 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~  190 (256)
T cd05113         125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVL  190 (256)
T ss_pred             ccCcceEEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHH
Confidence            7899999999999999999998875433221 1111222345699999987655 457999998853

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.00  E-value=1.2e-10  Score=59.64  Aligned_cols=66  Identities=30%  Similarity=0.480  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++.......+... ....+..|++||.+.... ...+|+|++|+.
T Consensus       131 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  197 (270)
T cd05056         131 RDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKAS-KGKLPIKWMAPESINFRRFTSASDVWMFGVC  197 (270)
T ss_pred             cccChheEEEecCCCeEEccCceeeecccccceecC-CCCccccccChhhhccCCCCchhhhHHHHHH
Confidence            379999999999999999999988754333222111 112234599999886554 568999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.00  E-value=8.9e-11  Score=59.41  Aligned_cols=65  Identities=38%  Similarity=0.674  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++..+.++++|||.+............ ....+..|++||.+.... ...+|+|++|+
T Consensus       127 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~  192 (258)
T smart00219      127 RDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGV  192 (258)
T ss_pred             cccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHH
Confidence            379999999999999999999998765433222211 122456799999886544 56899998774

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0589|consensus

Probab=99.00  E-value=7.7e-11  Score=64.02  Aligned_cols=64  Identities=17%  Similarity=0.255  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      +|+|+.||+++.+..+++.|||+++.+.+.... .......| .||.||++.+.. ..++|+|+.|.
T Consensus       130 RDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~-a~tvvGTp-~YmcPEil~d~pYn~KSDiWsLGC  194 (426)
T KOG0589|consen  130 RDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL-ASTVVGTP-YYMCPEILSDIPYNEKSDIWSLGC  194 (426)
T ss_pred             ccchhhhhhccccCceeecchhhhhhcCCchhh-hheecCCC-cccCHHHhCCCCCCccCcchhhcc
Confidence            589999999999999999999999876554311 11111223 499999999877 46999998874

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.99  E-value=3.7e-11  Score=62.63  Aligned_cols=65  Identities=11%  Similarity=0.118  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........  .......+..|+|||.+....  ...+|+|++|+.
T Consensus       128 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  194 (309)
T cd07872         128 RDLKPQNLLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCI  194 (309)
T ss_pred             CCCCHHHEEECCCCCEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999865322211  111111234599999886533  457999998753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0690|consensus

Probab=98.99  E-value=1.1e-10  Score=62.23  Aligned_cols=63  Identities=16%  Similarity=0.091  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-cCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-AADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+|.+|++++.++++|+.|||++..-- -....+   ..++..-|+|||++....+ ..+|.|.-||
T Consensus       292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k---TFCGTPEYLAPEVleDnDYgraVDWWG~GV  356 (516)
T KOG0690|consen  292 RDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK---TFCGTPEYLAPEVLEDNDYGRAVDWWGVGV  356 (516)
T ss_pred             eechhhhheeccCCceEeeecccchhcccccceec---cccCChhhcCchhhccccccceeehhhhhH
Confidence            4889999999999999999999996421 111111   1233445999999987664 4677786654

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.99  E-value=4.8e-11  Score=57.85  Aligned_cols=55  Identities=20%  Similarity=0.071  Sum_probs=40.6

Q ss_pred             ccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          4 STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         4 ~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+.||+++.++.+++  ||.+........       .....|+|||.+.+.. ..++|+|++|+.
T Consensus        38 kp~Nil~~~~~~~~~--fG~~~~~~~~~~-------~g~~~y~aPE~~~~~~~~~~~DiwSlG~i   93 (176)
T smart00750       38 KSGNILLTWDGLLKL--DGSVAFKTPEQS-------RVDPYFMAPEVIQGQSYTEKADIYSLGIT   93 (176)
T ss_pred             CcccEeEcCccceee--ccceEeeccccC-------CCcccccChHHhcCCCCcchhhHHHHHHH
Confidence            789999999999988  888765332211       1234599999998766 458999998863

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.99  E-value=9.7e-11  Score=60.88  Aligned_cols=65  Identities=18%  Similarity=0.197  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++......... . ........|++||.+.... ...+|+|++|+.
T Consensus       139 ~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi  204 (296)
T cd06655         139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-R-STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  204 (296)
T ss_pred             CCCCHHHEEECCCCCEEEccCccchhccccccc-C-CCcCCCccccCcchhcCCCCCchhhHHHHHHH
Confidence            379999999999999999999988754332211 1 1111224599999987655 568999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.99  E-value=9.8e-11  Score=62.11  Aligned_cols=64  Identities=17%  Similarity=0.150  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.++.......  .. ....+..|++||.+.... ..++|+|++|+.
T Consensus       142 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~  206 (353)
T cd07850         142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCI  206 (353)
T ss_pred             CCCCHHHEEECCCCCEEEccCccceeCCCCCC--CC-CCcccccccCHHHHhCCCCCCchhhHhHHHH
Confidence            48999999999999999999999875432211  11 111234589999987655 568999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.99  E-value=6e-11  Score=60.49  Aligned_cols=64  Identities=14%  Similarity=0.049  Sum_probs=45.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+......... . .....+..|+|||.+.... ...+|+|++|+.
T Consensus       131 dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~-~-~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~  195 (267)
T cd08228         131 DIKPANVFITATGVVKLGDLGLGRFFSSKTTA-A-HSLVGTPYYMSPERIHENGYNFKSDIWSLGCL  195 (267)
T ss_pred             CCCHHHEEEcCCCCEEECccccceeccchhHH-H-hcCCCCccccChhhhccCCCCchhhHHHHHHH
Confidence            78999999999999999999988754332211 1 1112234699999987654 557999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.99  E-value=2.2e-10  Score=58.40  Aligned_cols=66  Identities=27%  Similarity=0.380  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++..+.+++.|||.+..+...... .......+..|++||.+.... ...+|+|++|+.
T Consensus       126 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  192 (260)
T cd05073         126 RDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL  192 (260)
T ss_pred             cccCcceEEEcCCCcEEECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHH
Confidence            479999999999999999999988654322211 111112245699999987655 457999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.98  E-value=7.7e-11  Score=59.79  Aligned_cols=64  Identities=23%  Similarity=0.461  Sum_probs=46.1

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      |+++.|++++.++.+++.|||.++...... .........+..|++||.+..+. ..++|+|++|+
T Consensus       125 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~  189 (256)
T cd05112         125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGV  189 (256)
T ss_pred             ccccceEEEcCCCeEEECCCcceeecccCc-ccccCCCccchhhcCHhHhccCCcChHHHHHHHHH
Confidence            789999999999999999999887543222 11111222345799999887655 45799999885

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.98  E-value=1.5e-10  Score=59.65  Aligned_cols=63  Identities=17%  Similarity=0.090  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++..+......    ....+..|++||.+..+.  ....|+|++|+.
T Consensus       121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~  185 (278)
T cd05606         121 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM  185 (278)
T ss_pred             CCCCHHHEEECCCCCEEEccCcCccccCccCCc----CcCCCcCCcCcHHhcCCCCCCcccchHhHHHH
Confidence            479999999999999999999988654322211    111234599999987542  457899998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.98  E-value=5.2e-11  Score=61.22  Aligned_cols=65  Identities=12%  Similarity=0.102  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+..+.....  .......+..|+|||.+.+..  ..++|+|++|+.
T Consensus       123 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  189 (284)
T cd07839         123 RDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI  189 (284)
T ss_pred             CCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHH
Confidence            37899999999999999999998875432211  111112234589999886543  457899998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.98  E-value=1e-10  Score=60.18  Aligned_cols=63  Identities=22%  Similarity=0.130  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.........    ....+..|++||.+.... ..++|+|++|+.
T Consensus       119 ~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~  182 (279)
T cd06619         119 RDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAK----TYVGTNAYMAPERISGEQYGIHSDVWSLGIS  182 (279)
T ss_pred             CCCCHHHEEECCCCCEEEeeCCcceeccccccc----CCCCChhhcCceeecCCCCCCcchHHHHHHH
Confidence            379999999999999999999998754332111    112234599999987655 568999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.97  E-value=2.9e-10  Score=58.31  Aligned_cols=66  Identities=29%  Similarity=0.414  Sum_probs=46.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccC-cceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+...... ...........+..|++||...... ....|+|++|+.
T Consensus       134 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~  201 (284)
T cd05038         134 DLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVT  201 (284)
T ss_pred             CCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhh
Confidence            79999999999999999999998765422 1111111112244589999887655 558999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.97  E-value=9.9e-11  Score=60.81  Aligned_cols=65  Identities=18%  Similarity=0.192  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... . .....+..|++||.+.... ..+.|+|++|+.
T Consensus       140 ~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvi  205 (296)
T cd06654         140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R-STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  205 (296)
T ss_pred             CCCCHHHEEEcCCCCEEECccccchhccccccc-c-CcccCCccccCHHHHcCCCCCccchHHHHHHH
Confidence            379999999999999999999988654322111 1 1111234599999987654 568999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.97  E-value=1.4e-10  Score=58.83  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=45.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||++...........  .......|+|||...... ..+.|+|++|+.
T Consensus       127 di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  191 (257)
T cd08223         127 DLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS--TLIGTPYYMSPELFSNKPYNYKSDVWALGCC  191 (257)
T ss_pred             CCCchhEEEecCCcEEEecccceEEecccCCccc--cccCCcCccChhHhcCCCCCchhhhHHHHHH
Confidence            7899999999999999999999865432211111  111234599999987655 457899998853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.97  E-value=1.6e-10  Score=58.81  Aligned_cols=65  Identities=23%  Similarity=0.368  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .. ....+..|++||.+.... ...+|+|++|+.
T Consensus       128 ~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~-~~-~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~  193 (261)
T cd05148         128 RDLAARNILVGEDLVCKVADFGLARLIKEDVYL-SS-DKKIPYKWTAPEAASHGTFSTKSDVWSFGIL  193 (261)
T ss_pred             cccCcceEEEcCCceEEEccccchhhcCCcccc-cc-CCCCceEecCHHHHccCCCCchhhHHHHHHH
Confidence            379999999999999999999988654322111 11 223355699999987655 458999998753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.96  E-value=2.4e-10  Score=58.71  Aligned_cols=64  Identities=17%  Similarity=0.149  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+..........   ....+..|++||.+.... ..+.|+|++|+.
T Consensus       131 ~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~  195 (287)
T cd07838         131 RDLKPQNILVTSDGQVKIADFGLARIYSFEMALT---SVVVTLWYRAPEVLLQSSYATPVDMWSVGCI  195 (287)
T ss_pred             ccCChhhEEEccCCCEEEeccCcceeccCCcccc---cccccccccChHHhccCCCCCcchhhhHHHH
Confidence            4789999999999999999999887643322111   111234589999987655 568999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.96  E-value=1.6e-10  Score=58.56  Aligned_cols=64  Identities=14%  Similarity=0.132  Sum_probs=46.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+............  ...+..|++||...... ..++|+|++|+.
T Consensus       126 dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  190 (256)
T cd08529         126 DIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPELCEDKPYNEKSDVWALGVV  190 (256)
T ss_pred             CCCcceEEEeCCCCEEEcccccceeccCccchhhc--cccCccccCHHHhcCCCCCCccchHHHHHH
Confidence            78999999999999999999988754433211111  11234589999988665 568999998864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.96  E-value=7.5e-11  Score=68.93  Aligned_cols=67  Identities=19%  Similarity=0.177  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-------------ee---cCCCcccceeEEeccccccCC-CCCCCceE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-------------YD---LGGKSALPIRWMAWESIVKVP-SQDGPSQS   63 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-------------~~---~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~   63 (69)
                      .|+||.||+++..+.+++.|||++........             ..   ......++..|+|||.+.+.. ..++|+|+
T Consensus       137 RDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWS  216 (932)
T PRK13184        137 RDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYA  216 (932)
T ss_pred             cCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHH
Confidence            48999999999999999999999875411100             00   000012345699999988665 55899999


Q ss_pred             EEEe
Q psy10556         64 YRIF   67 (69)
Q Consensus        64 ~~i~   67 (69)
                      +|+.
T Consensus       217 LGVI  220 (932)
T PRK13184        217 LGVI  220 (932)
T ss_pred             HHHH
Confidence            8863

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.96  E-value=5.9e-11  Score=60.99  Aligned_cols=65  Identities=18%  Similarity=0.173  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........  .......+..|+|||.+....  ...+|+|++|+.
T Consensus       125 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  191 (285)
T cd07861         125 RDLKPQNLLIDNKGVIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTI  191 (285)
T ss_pred             cCCCHHHEEEcCCCcEEECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHH
Confidence            47999999999999999999999865432211  111112234599999886533  457899998853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.95  E-value=4.3e-10  Score=57.89  Aligned_cols=64  Identities=22%  Similarity=0.126  Sum_probs=43.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||++...........  .......|++||.+...     . ...+|+|++|+.
T Consensus       128 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi  197 (282)
T cd06643         128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD--SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT  197 (282)
T ss_pred             CCCcccEEEccCCCEEEccccccccccccccccc--cccccccccCHhhccccCCCCCCCCccchhhhHHHH
Confidence            7999999999999999999998865432211111  11123459999988521     1 347999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.95  E-value=1.3e-10  Score=60.30  Aligned_cols=67  Identities=10%  Similarity=0.068  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+||.+..........  .......+..|+|||.+....  ..++|+|++|+.
T Consensus       143 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  213 (310)
T cd07865         143 RDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI  213 (310)
T ss_pred             cCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence            3799999999999999999999987543221110  111112234599999886543  457999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.94  E-value=1.8e-10  Score=58.67  Aligned_cols=65  Identities=26%  Similarity=0.381  Sum_probs=46.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+......... .......+..|++||.+.... ...+|+|++|+.
T Consensus       127 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~  192 (260)
T cd05067         127 DLRAANILVSETLCCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL  192 (260)
T ss_pred             cccHHhEEEcCCCCEEEccCcceeecCCCCcc-cccCCcccccccCHHHhccCCcCcccchHHHHHH
Confidence            78999999999999999999998754422211 111112345699999887655 458999998853

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.94  E-value=1.5e-10  Score=59.74  Aligned_cols=63  Identities=17%  Similarity=0.101  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++........  .  ....+..|++||.+..+.  ..++|+|++|+.
T Consensus       121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--~--~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  185 (279)
T cd05633         121 RDLKPANILLDEHGHVRISDLGLACDFSKKKP--H--ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCM  185 (279)
T ss_pred             CCCCHHHEEECCCCCEEEccCCcceeccccCc--c--CcCCCcCccCHHHhcCCCCCCchhhhHHHHHH
Confidence            48999999999999999999999865432211  1  111234599999886432  457899998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.94  E-value=8.8e-11  Score=60.94  Aligned_cols=64  Identities=22%  Similarity=0.227  Sum_probs=45.0

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||++........  .......+..|+|||.+.... ..+.|+|++|+.
T Consensus       143 dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi  207 (292)
T cd06658         143 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM  207 (292)
T ss_pred             CCCHHHEEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHH
Confidence            7899999999999999999998864322110  001111234599999987654 457999998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=2.3e-10  Score=58.22  Aligned_cols=67  Identities=18%  Similarity=0.132  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecC-CCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLG-GKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+............ .....+..|++||.+.+.. ...+|+|++|+.
T Consensus       128 ~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  196 (263)
T cd06625         128 RDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCT  196 (263)
T ss_pred             CCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHH
Confidence            378999999999999999999988654322111110 0111234589999998765 468999988753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.93  E-value=2.3e-10  Score=58.43  Aligned_cols=66  Identities=17%  Similarity=0.062  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.++........ ...........|++||.+.... ...+|+|++|+.
T Consensus       131 dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  198 (265)
T cd06652         131 DIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCT  198 (265)
T ss_pred             CCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHH
Confidence            78999999999999999999988754321100 0000011234599999987654 467999998853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.93  E-value=4.1e-10  Score=57.19  Aligned_cols=62  Identities=27%  Similarity=0.385  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.......     .....+..|++||.+..+. ....|+|++|+.
T Consensus       124 ~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  186 (254)
T cd05083         124 RDLAARNILVSEDGVAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL  186 (254)
T ss_pred             cccCcceEEEcCCCcEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHH
Confidence            3799999999999999999999886432111     1112245699999887655 457999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG4279|consensus

Probab=98.93  E-value=4.8e-10  Score=64.58  Aligned_cols=63  Identities=24%  Similarity=0.220  Sum_probs=45.5

Q ss_pred             CCcccceeEEc-CCCeEEEcccCccccccc-CcceecCCCcccceeEEeccccccCC--C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESIVKVP--S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aPe~~~~~~--~-~~~~~w~~~i   66 (69)
                      .|+|..|+|++ ..|.+|+.|||.+..+-. +....+.   .+.+-|||||++-.+.  + ...|+||||.
T Consensus       699 RDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF---TGTLQYMAPEvIDqG~RGYG~aADIWS~GC  766 (1226)
T KOG4279|consen  699 RDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEVIDQGPRGYGKAADIWSFGC  766 (1226)
T ss_pred             ccccCCcEEEeeccceEEecccccchhhccCCcccccc---ccchhhhChHhhccCCcCCCchhhhhhccc
Confidence            48999999995 579999999998865432 2222222   2245699999998765  3 3789999985

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.93  E-value=1.7e-10  Score=58.81  Aligned_cols=66  Identities=24%  Similarity=0.351  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||...... ....|+|++|+.
T Consensus       126 ~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~  192 (260)
T cd05069         126 RDLRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  192 (260)
T ss_pred             cccCcceEEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHH
Confidence            379999999999999999999998654322211 111112245699999887655 557899998853

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.93  E-value=1.3e-10  Score=59.96  Aligned_cols=64  Identities=22%  Similarity=0.104  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC---C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV---P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||+++...........   .....|++||.+...   . ...+|+|++|+.
T Consensus       132 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i  199 (288)
T cd06616         132 RDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRD---AGCRPYMAPERIDPSARDGYDVRSDVWSLGIT  199 (288)
T ss_pred             cCCCHHHEEEccCCcEEEeecchhHHhccCCccccc---cCccCccCHHHhccccccCCcchhhhhHHHHH
Confidence            379999999999999999999998654322111111   123459999998765   2 457999998853

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.93  E-value=2.8e-10  Score=58.16  Aligned_cols=66  Identities=17%  Similarity=0.086  Sum_probs=45.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||+++......... .......+..|+|||.+.... ...+|+|++|+.
T Consensus       131 ~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  198 (266)
T cd06651         131 DIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCT  198 (266)
T ss_pred             CCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHH
Confidence            789999999999999999999886543211000 000111235699999987654 458999998853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG1151|consensus

Probab=98.92  E-value=2.4e-09  Score=59.28  Aligned_cols=66  Identities=21%  Similarity=0.194  Sum_probs=45.7

Q ss_pred             CcccceeEEcC---CCeEEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHA---GYSIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      |+||.|||+..   .+.+|+.|||++..+....+-.     ......+..+|++||++.-++     ..++|+|+.||.
T Consensus       595 DLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI  673 (775)
T KOG1151|consen  595 DLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI  673 (775)
T ss_pred             ccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehh
Confidence            79999999953   4788999999998765432211     111223456677999987542     458999999874

>KOG0584|consensus

Probab=98.92  E-value=1.2e-10  Score=65.16  Aligned_cols=65  Identities=15%  Similarity=0.072  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEecC
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFNL   69 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~~~   69 (69)
                      .|||..||+++++ |.+|+.|+|++.......+....    ++.-+||||.-.......+|+++||++-|
T Consensus       169 RDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvI----GTPEFMAPEmYEE~YnE~VDVYaFGMCmL  234 (632)
T KOG0584|consen  169 RDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVI----GTPEFMAPEMYEENYNELVDVYAFGMCML  234 (632)
T ss_pred             cccccceEEEcCCcCceeecchhHHHHhhccccceec----cCccccChHHHhhhcchhhhhhhhhHHHH
Confidence            4899999999875 89999999999765433322211    12349999988755467899999998753

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.92  E-value=2.8e-10  Score=58.11  Aligned_cols=65  Identities=20%  Similarity=0.058  Sum_probs=43.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---C-CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---V-PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~-~~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........  ..........|+|||.+..   . ....+|+|++|+.
T Consensus       130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i  198 (267)
T cd06645         130 RDIKGANILLTDNGHVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT  198 (267)
T ss_pred             CCCCHHHEEECCCCCEEECcceeeeEccCccc--ccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence            37899999999999999999998865432211  0011112345999998742   2 2457999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.92  E-value=3.3e-10  Score=58.59  Aligned_cols=61  Identities=20%  Similarity=0.218  Sum_probs=45.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||++........     ....+..|++||.+.... ....|+|++|+.
T Consensus       126 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  187 (290)
T cd05580         126 DLKPENLLLDSDGYIKITDFGFAKRVKGRTY-----TLCGTPEYLAPEIILSKGYGKAVDWWALGIL  187 (290)
T ss_pred             CCCHHHEEECCCCCEEEeeCCCccccCCCCC-----CCCCCccccChhhhcCCCCCccccHHHHHHH
Confidence            7899999999999999999999876433211     112234599999887654 457899998853

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.92  E-value=2.1e-10  Score=59.21  Aligned_cols=65  Identities=11%  Similarity=0.110  Sum_probs=44.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++.......  .......+..|++||.+.+..  ...+|+|++|+.
T Consensus       127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~i  193 (291)
T cd07844         127 RDLKPQNLLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCI  193 (291)
T ss_pred             ccCCHHHEEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHH
Confidence            37899999999999999999998864322110  011111234589999886533  457899999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.92  E-value=2.4e-10  Score=59.07  Aligned_cols=65  Identities=11%  Similarity=0.088  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... . ........|++||.+.+..  ...+|+|++|+.
T Consensus       127 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  193 (291)
T cd07870         127 RDLKPQNLLISYLGELKLADFGLARAKSIPSQT-Y-SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCI  193 (291)
T ss_pred             CCCChHHEEEcCCCcEEEeccccccccCCCCCC-C-CCccccccccCCceeecCCCCCcHHHHHHHHHH
Confidence            489999999999999999999988643222100 0 1111234599999886532  457899998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.92  E-value=1.2e-10  Score=61.33  Aligned_cols=67  Identities=15%  Similarity=0.082  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.......... .......+..|+|||.+....  ...+|+|++|+.
T Consensus       130 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi  199 (336)
T cd07849         130 RDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI  199 (336)
T ss_pred             cCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence            3799999999999999999999886543221111 111112234589999875432  457899998864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0033|consensus

Probab=98.91  E-value=4.3e-10  Score=58.01  Aligned_cols=63  Identities=14%  Similarity=0.177  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+||.|+++...   ..+|+++||++..........   +..+...||+||++...++ ..+|+|+.||
T Consensus       134 RDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~---G~~GtP~fmaPEvvrkdpy~kpvDiW~cGV  200 (355)
T KOG0033|consen  134 RDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGV  200 (355)
T ss_pred             ccCChhheeeeeccCCCceeecccceEEEeCCccccc---cccCCCcccCHHHhhcCCCCCcchhhhhhH
Confidence            4899999999754   467999999997655322211   1122345999999997774 5799998876

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.91  E-value=1.6e-10  Score=60.00  Aligned_cols=65  Identities=11%  Similarity=0.108  Sum_probs=44.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........  .......+..|++||.+....  ..++|+|++|+.
T Consensus       128 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~  194 (301)
T cd07873         128 RDLKPQNLLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCI  194 (301)
T ss_pred             CCCCHHHEEECCCCcEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHH
Confidence            48999999999999999999998865332211  111111234589999886533  347899998863

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.90  E-value=4.3e-10  Score=57.55  Aligned_cols=61  Identities=23%  Similarity=0.198  Sum_probs=41.8

Q ss_pred             CCcccceeEEcCCCe-------EEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS-------IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~-------~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.       +++.+||.+........      ...+..|+|||.+....  ...+|+|++|+.
T Consensus       129 ~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~  198 (262)
T cd05077         129 GNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQE------CVERIPWIAPECVEDSKNLSIAADKWSFGTT  198 (262)
T ss_pred             CCCCcccEEEecCCccCCCCceeEeCCCCCCccccCccc------ccccccccChhhhcCCCCCCchhHHHHHHHH
Confidence            489999999976553       78999998865432210      11134599999886432  457999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.90  E-value=2.2e-10  Score=58.46  Aligned_cols=65  Identities=14%  Similarity=0.049  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.........  .........|++||.+.... ...+|+|++|+.
T Consensus       130 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i  195 (267)
T cd08229         130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL  195 (267)
T ss_pred             CCCCHHHEEEcCCCCEEECcchhhhccccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHH
Confidence            378999999999999999999988654322111  01112234589999987655 457999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.90  E-value=4.3e-10  Score=57.63  Aligned_cols=66  Identities=24%  Similarity=0.547  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+++++.......... ......+..|++||.+.... ...+|+|++|+.
T Consensus       141 ~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  207 (275)
T cd05046         141 RDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYK-LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVL  207 (275)
T ss_pred             CcCccceEEEeCCCcEEEcccccccccCcccccc-cCCceeEEeecChhhhccCCCCchhhHHHHHHH
Confidence            3799999999999999999999886443222111 11223356699999887554 457999998854

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.90  E-value=3.4e-10  Score=59.68  Aligned_cols=67  Identities=15%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---ecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---DLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.........   ........+..|++||.+....  ...+|+|++|+.
T Consensus       131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~  202 (337)
T cd07852         131 RDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI  202 (337)
T ss_pred             CCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHH
Confidence            478999999999999999999988754322110   0000111233589999876432  457999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.90  E-value=2.1e-10  Score=58.43  Aligned_cols=64  Identities=14%  Similarity=0.058  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+..+......  ......+..|.+||.+.... ...+|+|++|+.
T Consensus       131 dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i  195 (267)
T cd08224         131 DIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL  195 (267)
T ss_pred             CcChhhEEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHH
Confidence            78999999999999999999988654322110  01111234589999887654 458999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.90  E-value=2.6e-10  Score=57.92  Aligned_cols=62  Identities=24%  Similarity=0.420  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.++.......     ....+..|++||.+..+. ...+|+|++|+.
T Consensus       126 ~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~i  188 (256)
T cd05039         126 RDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGIL  188 (256)
T ss_pred             hhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence            37899999999999999999999876532211     112245699999887655 457999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.89  E-value=1.3e-10  Score=60.38  Aligned_cols=65  Identities=20%  Similarity=0.192  Sum_probs=45.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++..+........  ....+..|++||.+.... ....|+|++|+.
T Consensus       141 ~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  206 (297)
T cd06659         141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK--SLVGTPYWMAPEVISRTPYGTEVDIWSLGIM  206 (297)
T ss_pred             CCCCHHHeEEccCCcEEEeechhHhhccccccccc--ceecCccccCHHHHccCCCCchhhHHHHHHH
Confidence            37899999999999999999998865432211111  111234599999987655 557999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=3.3e-10  Score=57.53  Aligned_cols=64  Identities=20%  Similarity=0.099  Sum_probs=44.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC---C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV---P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+...........  .......|++||.+...   . ...+|+|++|+.
T Consensus       126 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~  193 (262)
T cd06613         126 DIKGANILLTEDGDVKLADFGVSAQLTATIAKRK--SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT  193 (262)
T ss_pred             CCChhhEEECCCCCEEECccccchhhhhhhhccc--cccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence            7899999999999999999998865432210111  11113358999998754   3 457999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.89  E-value=3.7e-10  Score=58.86  Aligned_cols=65  Identities=14%  Similarity=0.085  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........  ..........|++||.+....  ...+|+|++|+.
T Consensus       132 ~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i  198 (309)
T cd07845         132 RDLKVSNLLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCI  198 (309)
T ss_pred             CCCCHHHEEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHH
Confidence            37899999999999999999999875443211  111111234589999986533  458999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0669|consensus

Probab=98.89  E-value=1.1e-09  Score=56.75  Aligned_cols=64  Identities=11%  Similarity=0.076  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCC-CcccceeEEeccccccCC-C-CCCCceEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGG-KSALPIRWMAWESIVKVP-S-QDGPSQSY   64 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~aPe~~~~~~-~-~~~~~w~~   64 (69)
                      .|+|+.|+|++.++.++++|||+++.+...+. ..... ...+.++|..||.+.+.. + ...|+|.-
T Consensus       148 RDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgA  215 (376)
T KOG0669|consen  148 RDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGA  215 (376)
T ss_pred             hcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhH
Confidence            48899999999999999999999987664421 11122 223456677999999866 3 46788843

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.89  E-value=1.8e-10  Score=58.83  Aligned_cols=63  Identities=11%  Similarity=0.185  Sum_probs=46.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||.+.........   .....+..|++||.+.... ...+|+|++|+.
T Consensus       139 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l  202 (269)
T cd08528         139 DLTPNNIMLGEDDKVTITDFGLAKQKQPESKL---TSVVGTILYSCPEIVKNEPYGEKADVWAFGCI  202 (269)
T ss_pred             CCCHHHEEECCCCcEEEecccceeeccccccc---ccccCcccCcChhhhcCCCCchHHHHHHHHHH
Confidence            78999999999999999999998754433211   1112234599999998655 468999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.88  E-value=1.5e-10  Score=60.21  Aligned_cols=67  Identities=16%  Similarity=0.058  Sum_probs=45.3

Q ss_pred             CCcccceeEEcC----CCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA----GYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~----~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.    ++.+++.|||++........ .........+..|+|||.+.+..  ...+|+|++|+.
T Consensus       132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  205 (316)
T cd07842         132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCI  205 (316)
T ss_pred             CCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHH
Confidence            379999999999    89999999998875432211 00111112234589999876533  457899998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.88  E-value=4e-10  Score=57.95  Aligned_cols=66  Identities=18%  Similarity=0.061  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... ..........|++||.+... . ..++|+|++|+.
T Consensus       124 ~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~  191 (288)
T cd07833         124 RDIKPENILVSESGVLKLCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI  191 (288)
T ss_pred             CCCCHHHeEECCCCCEEEEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHH
Confidence            378999999999999999999988754432210 00011112348999998876 3 468999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.88  E-value=9.2e-10  Score=56.97  Aligned_cols=65  Identities=22%  Similarity=0.139  Sum_probs=43.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+...........  ....+..|++||.+..     .. ...+|+|++|+.
T Consensus       134 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i  204 (292)
T cd06644         134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD--SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT  204 (292)
T ss_pred             cCCCcceEEEcCCCCEEEccCccceeccccccccc--eecCCccccCceeeccccccCCCCCchhhhHhHHHH
Confidence            37999999999999999999998764322211001  1111245999998853     11 346899998864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.88  E-value=1.7e-10  Score=58.71  Aligned_cols=65  Identities=25%  Similarity=0.351  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||.+.... ..++|+|++|+
T Consensus       127 ~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~  192 (261)
T cd05034         127 RDLAARNILVGENLVCKIADFGLARLIEDDEYT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGI  192 (261)
T ss_pred             CCcchheEEEcCCCCEEECccccceeccchhhh-hhhccCCCccccCHHHhccCCcCchhHHHHHHH
Confidence            378999999999999999999988754322111 111112244699999887655 45799999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.88  E-value=4e-10  Score=57.62  Aligned_cols=65  Identities=22%  Similarity=0.139  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.......  ...........|++||.+...     . ...+|+|++|+.
T Consensus       135 ~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~  205 (272)
T cd06637         135 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT  205 (272)
T ss_pred             CCCCHHHEEECCCCCEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHH
Confidence            3789999999999999999999986543221  111111123459999988631     1 347999998853

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.88  E-value=3.2e-10  Score=58.62  Aligned_cols=64  Identities=19%  Similarity=0.099  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |++++||+++.++.+++.|||.+........  .......+..|++||.+....  ...+|+|++|+.
T Consensus       131 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~  196 (293)
T cd07843         131 DLKTSNLLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCI  196 (293)
T ss_pred             cCCHHHEEECCCCcEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHH
Confidence            7899999999999999999998875543211  111111234599999887543  457999998753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.87  E-value=7.8e-10  Score=57.17  Aligned_cols=64  Identities=23%  Similarity=0.170  Sum_probs=44.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC------CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP------SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+............  ......|++||.+....      ..++|+|++|+.
T Consensus       153 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi  222 (291)
T cd06639         153 DVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNT--SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT  222 (291)
T ss_pred             CCCHHHEEEcCCCCEEEeecccchhcccccccccC--ccCCccccChhhhcCCCCcccccCCccchHHHHHH
Confidence            78999999999999999999988754332211111  11234599999876432      357999998864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.87  E-value=2.2e-10  Score=59.55  Aligned_cols=64  Identities=19%  Similarity=0.203  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+......... . ........|++||.+.... ..+.|+|++|+.
T Consensus       140 dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvi  204 (297)
T cd06656         140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R-STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  204 (297)
T ss_pred             CCCHHHEEECCCCCEEECcCccceEccCCccC-c-CcccCCccccCHHHHcCCCCCcHHHHHHHHHH
Confidence            78999999999999999999988654332211 1 1111234589999987654 457999998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.87  E-value=4.2e-10  Score=57.03  Aligned_cols=64  Identities=22%  Similarity=0.155  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.|++++.++.+++.+||.+............  ......|++||.+.+.. ..++|+|++|+
T Consensus       123 ~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~y~~PE~~~~~~~~~~~Di~s~G~  187 (256)
T cd06612         123 RDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYNNKADIWSLGI  187 (256)
T ss_pred             CCCCcceEEECCCCcEEEcccccchhcccCcccccc--ccCCccccCHHHHhcCCCCchhhHHHHHH
Confidence            378999999999999999999998754432211111  11123599999987655 45799999886

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.86  E-value=4.3e-10  Score=57.42  Aligned_cols=63  Identities=21%  Similarity=0.098  Sum_probs=43.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---C-CCCCCCceEEEE
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---V-PSQDGPSQSYRI   66 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~-~~~~~~~w~~~i   66 (69)
                      |+++.|++++.++.+++.|||.+........ ... ....+..|++||.+..   . ....+|+|++|+
T Consensus       131 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~~-~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~  197 (267)
T cd06646         131 DIKGANILLTDNGDVKLADFGVAAKITATIA-KRK-SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI  197 (267)
T ss_pred             CCCHHHEEECCCCCEEECcCccceeeccccc-ccC-ccccCccccCHhHcccccCCCCcchhhHHHHHH
Confidence            7899999999999999999999875432211 011 1112345999998752   1 235789999885

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.86  E-value=6e-10  Score=56.71  Aligned_cols=66  Identities=24%  Similarity=0.212  Sum_probs=46.1

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+..........  .......+..|++||.+... . ..++|+|++|+.
T Consensus       127 ~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i  196 (267)
T cd06610         127 DIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT  196 (267)
T ss_pred             CCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHH
Confidence            789999999999999999999886544322110  11111123458999998765 3 568999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.85  E-value=5.8e-10  Score=57.91  Aligned_cols=64  Identities=19%  Similarity=0.200  Sum_probs=45.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||++...........  ....+..|++||.+.... ....|+|++|+.
T Consensus       140 dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~l  204 (293)
T cd06647         140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  204 (293)
T ss_pred             cCCHHHEEEcCCCCEEEccCcceecccccccccc--cccCChhhcCchhhccCCCCchhhHHHHHHH
Confidence            7899999999999999999998765433221111  111234599999987654 458999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=6.1e-10  Score=57.09  Aligned_cols=65  Identities=22%  Similarity=0.166  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++........  .......+..|++||.+.... ..++|+|++|+.
T Consensus       122 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~i  187 (274)
T cd06609         122 RDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGIT  187 (274)
T ss_pred             CCCCHHHEEECCCCCEEEcccccceeeccccc--ccccccCCccccChhhhccCCCCchhhHHHHHHH
Confidence            37899999999999999999999875443211  111111123489999988755 568999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.85  E-value=6.5e-10  Score=58.06  Aligned_cols=63  Identities=19%  Similarity=0.150  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........ .   ....+..|++||.+.+.. ..+.|+|++|+.
T Consensus       124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~---~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~  187 (308)
T cd06615         124 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-N---SFVGTRSYMSPERLQGTHYTVQSDIWSLGLS  187 (308)
T ss_pred             CCCChHHEEEecCCcEEEccCCCccccccccc-c---cCCCCcCccChhHhcCCCCCccchHHHHHHH
Confidence            37899999999999999999998865432211 1   111234599999887544 457999998854

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4645|consensus

Probab=98.85  E-value=1.3e-09  Score=65.44  Aligned_cols=68  Identities=16%  Similarity=-0.004  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ce-ecCCCcccceeEEeccccccCC----CCCCCceEEEEec
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YY-DLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRIFN   68 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i~~   68 (69)
                      .|+|+.||+++.++.+|..|||.+....++. .. +....-.++.-|||||++.+..    ....|+|+-|.-.
T Consensus      1358 RDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1358 RDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred             cCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence            4899999999999999999999987654331 00 0111111223499999998633    4578999988643

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.85  E-value=4.4e-10  Score=58.07  Aligned_cols=65  Identities=17%  Similarity=0.067  Sum_probs=44.5

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++. ++.+++.|||.+..+.....  ..........|+|||.+....  ..++|+|++|+.
T Consensus       134 ~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~  201 (295)
T cd07837         134 RDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCI  201 (295)
T ss_pred             cCCChHHEEEecCCCeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHH
Confidence            478999999998 88999999998875432211  001111123589999886533  458999998864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.84  E-value=8.7e-10  Score=55.95  Aligned_cols=61  Identities=23%  Similarity=0.163  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCC-------eEEEcccCcccccccCcceecCCCcccceeEEeccccccC--C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV--P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++..+       .+++.|||.+.......   ..   ..+..|++||.+...  . ....|+|++|+.
T Consensus       125 ~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~---~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE---ER---VERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             ccCccceEEEecCccccCCceeEEeCCCCccccccccc---cc---ccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence            48999999999877       79999999987543311   11   112349999998765  3 457999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0605|consensus

Probab=98.84  E-value=7.2e-10  Score=61.36  Aligned_cols=25  Identities=32%  Similarity=0.421  Sum_probs=23.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVR   25 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~   25 (69)
                      .|+||.|+|++..|++|+.|||++.
T Consensus       265 RDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  265 RDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             ccCChhheeecCCCCEeeccccccc
Confidence            4899999999999999999999974

>KOG0695|consensus

Probab=98.84  E-value=4.7e-10  Score=60.18  Aligned_cols=64  Identities=14%  Similarity=0.077  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-cCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-AADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|..|+|++..+.+|+.|+|++..-. +....++   .++...|.|||++.+..+ ..+|.|+.||+
T Consensus       375 rdlkldnvlldaeghikltdygmcke~l~~gd~tst---fcgtpnyiapeilrgeeygfsvdwwalgvl  440 (593)
T KOG0695|consen  375 RDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTST---FCGTPNYIAPEILRGEEYGFSVDWWALGVL  440 (593)
T ss_pred             eeccccceEEccCCceeecccchhhcCCCCCccccc---ccCCCcccchhhhcccccCceehHHHHHHH
Confidence            3789999999999999999999987532 2222222   223345999999997664 57888877664

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.83  E-value=5.8e-10  Score=58.75  Aligned_cols=67  Identities=18%  Similarity=0.133  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..+.......  .......+..|++||.+.+..  ....|+|++|+.
T Consensus       129 ~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~  199 (332)
T cd07857         129 RDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI  199 (332)
T ss_pred             CCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999987543221110  011112234599999876532  457899998864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.83  E-value=7.1e-10  Score=58.55  Aligned_cols=65  Identities=17%  Similarity=0.160  Sum_probs=45.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++...........  ....+..|++||.+... . ..++|+|++|+.
T Consensus       132 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  198 (337)
T cd07858         132 RDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMT--EYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI  198 (337)
T ss_pred             CCCCHHHEEEcCCCCEEECcCccccccCCCccccc--ccccccCccChHHHhcCCCCCCcccHHHHHHH
Confidence            37899999999999999999998875432211111  11123459999987642 2 568999998864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.83  E-value=6.7e-10  Score=57.44  Aligned_cols=64  Identities=20%  Similarity=0.223  Sum_probs=44.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+...........  .......|++||.+.... ..++|+|++|+.
T Consensus       140 dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~  204 (285)
T cd06648         140 DIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK--SLVGTPYWMAPEVISRLPYGTEVDIWSLGIM  204 (285)
T ss_pred             CCChhhEEEcCCCcEEEcccccchhhccCCcccc--cccCCccccCHHHhcCCCCCCcccHHHHHHH
Confidence            7899999999999999999998764332210001  111234599999987655 468999998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=9.6e-10  Score=56.41  Aligned_cols=65  Identities=23%  Similarity=0.155  Sum_probs=45.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+...........  ....+..|++||.+..+.  ....|+|++|+.
T Consensus       125 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  191 (277)
T cd06917         125 RDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS--TFVGTPYWMAPEVITEGKYYDTKADIWSLGIT  191 (277)
T ss_pred             CCcCHHHEEEcCCCCEEEccCCceeecCCCccccc--cccCCcceeCHHHhccCCccccchhHHHHHHH
Confidence            37899999999999999999998875543321111  111234599999887543  458999998753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=9.1e-10  Score=56.26  Aligned_cols=67  Identities=15%  Similarity=0.066  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||+++........ ...........|++||.+.... ...+|+|++|+.
T Consensus       130 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  198 (264)
T cd06653         130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACT  198 (264)
T ss_pred             CCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHH
Confidence            378999999999999999999998754321100 0000011234599999987654 567899998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0032|consensus

Probab=98.82  E-value=1.3e-09  Score=58.94  Aligned_cols=63  Identities=16%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCC----CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG----YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~----~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      +|+||+|+++...    +.+++.|||++............   .++..|+|||++.... ....|+|+-|+
T Consensus       159 rDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~---~Gtp~y~APEvl~~~~y~~~~DiWS~Gv  226 (382)
T KOG0032|consen  159 RDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTI---VGTPEYVAPEVLGGRPYGDEVDVWSIGV  226 (382)
T ss_pred             ccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeee---cCCccccCchhhcCCCCCcccchhHHHH
Confidence            5899999999654    47999999999765542211111   2234599999999655 56899998765

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.82  E-value=6.7e-10  Score=57.11  Aligned_cols=66  Identities=17%  Similarity=0.100  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ ........+..|++||.+....  ..++|+|++|+.
T Consensus       123 ~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  190 (286)
T cd07832         123 RDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCI  190 (286)
T ss_pred             CCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHH
Confidence            37899999999999999999998875443221 0011112245699999886543  458999998753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.82  E-value=5e-10  Score=57.63  Aligned_cols=64  Identities=19%  Similarity=0.120  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||++........  .......+..|++||.+....  ...+|+|++|+.
T Consensus       125 ~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  190 (286)
T cd07846         125 DIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL  190 (286)
T ss_pred             CCCHHHEEECCCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHH
Confidence            7899999999999999999998865433221  111111245689999887533  357999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.82  E-value=5.4e-10  Score=57.48  Aligned_cols=65  Identities=17%  Similarity=0.145  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+||.+........  ..........|++||.+.+..  ....|+|++|+.
T Consensus       124 ~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  190 (284)
T cd07860         124 RDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI  190 (284)
T ss_pred             CCCCHHHEEECCCCCEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence            37899999999999999999998865432211  111111234589999886543  346999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.82  E-value=1.4e-09  Score=56.01  Aligned_cols=65  Identities=23%  Similarity=0.150  Sum_probs=44.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC------CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV------PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~------~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+...      ...++|+|++|+.
T Consensus       148 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi  218 (286)
T cd06638         148 RDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRN--TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT  218 (286)
T ss_pred             cCCCHHhEEECCCCCEEEccCCceeecccCCCccc--cccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence            37899999999999999999999875432221111  11223459999987532      1347899998853

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.82  E-value=9.4e-10  Score=55.85  Aligned_cols=65  Identities=15%  Similarity=0.063  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+|+.|||.+........  .......+..|.+||.+.+.. ..++|+|++|+.
T Consensus       125 ~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i  190 (256)
T cd08221         125 RDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV  190 (256)
T ss_pred             cCCChHhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence            37899999999999999999998865433221  111111234599999987654 457899998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.81  E-value=1.3e-09  Score=56.19  Aligned_cols=63  Identities=24%  Similarity=0.159  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........  .  ....+..|++||.+....       ...+|+|++|+.
T Consensus       127 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i  196 (286)
T cd06622         127 RDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA--K--TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLS  196 (286)
T ss_pred             CCCCHHHEEECCCCCEEEeecCCcccccCCcc--c--cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHH
Confidence            37899999999999999999998865432211  1  111234599999886432       347899998853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.81  E-value=4.9e-10  Score=57.56  Aligned_cols=64  Identities=22%  Similarity=0.174  Sum_probs=45.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||++............  ...+..|++||.+.... ..++|+|++|+.
T Consensus       126 dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  190 (277)
T cd06642         126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDFKADIWSLGIT  190 (277)
T ss_pred             CCChheEEEeCCCCEEEccccccccccCcchhhhc--ccCcccccCHHHhCcCCCchhhhHHHHHHH
Confidence            78999999999999999999998754332211111  11234589999987655 458999998864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.81  E-value=7e-10  Score=56.32  Aligned_cols=64  Identities=14%  Similarity=0.136  Sum_probs=45.7

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+............  ...+..|++||.+.... ..++|+|++|+.
T Consensus       126 ~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i  190 (256)
T cd08218         126 DIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART--CIGTPYYLSPEICENRPYNNKSDIWALGCV  190 (256)
T ss_pred             CCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh--ccCCccccCHHHhCCCCCCCccchhHHHHH
Confidence            78999999999999999999988754332211111  11234599999987655 458999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.81  E-value=8.5e-10  Score=56.65  Aligned_cols=61  Identities=10%  Similarity=0.052  Sum_probs=44.8

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++ .+++.|||.+........   .   ..+..|+|||.+.... ...+|+|++|+.
T Consensus       133 ~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~---~---~~~~~y~aPE~~~~~~~~~~~DvwslG~i  195 (267)
T PHA03390        133 NDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC---Y---DGTLDYFSPEKIKGHNYDVSFDWWAVGVL  195 (267)
T ss_pred             CCCCHHHEEEeCCCCeEEEecCccceecCCCcc---C---CCCCcccChhhhcCCCCCchhhHHHHHHH
Confidence            47999999999888 999999998865432211   1   1234599999987655 457899998863

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.81  E-value=1.4e-09  Score=55.74  Aligned_cols=66  Identities=26%  Similarity=0.154  Sum_probs=44.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+.................+..|++||.+....   ..+.|+|++|+.
T Consensus       133 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~  201 (272)
T cd06629         133 DLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV  201 (272)
T ss_pred             CCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHH
Confidence            789999999999999999999886543211001111112245699999887533   457899988753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.81  E-value=1.1e-09  Score=55.96  Aligned_cols=67  Identities=24%  Similarity=0.248  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc----eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY----YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.++.......    .........+..|++||.+.... ...+|+|++|+.
T Consensus       130 ~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i  201 (267)
T cd06628         130 RDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL  201 (267)
T ss_pred             ccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHH
Confidence            37899999999999999999998875432110    00000111234599999987655 457899988753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0603|consensus

Probab=98.81  E-value=7.2e-10  Score=62.20  Aligned_cols=62  Identities=16%  Similarity=0.183  Sum_probs=45.4

Q ss_pred             CCcccceeEE-cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV-HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~-~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|||+ +..+.+++++||........ +..    -+...-|.|||++.... ....|+|++|++
T Consensus       439 RDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-~~t----p~~t~~y~APEvl~~~~yt~acD~WSLGvl  502 (612)
T KOG0603|consen  439 RDLKPGNILLDGSAGHLRLTYFGFWSELERS-CDT----PALTLQYVAPEVLAIQEYTEACDWWSLGVL  502 (612)
T ss_pred             cCCChhheeecCCCCcEEEEEechhhhCchh-hcc----cchhhcccChhhhccCCCCcchhhHHHHHH
Confidence            4899999999 58899999999998754332 111    12234488999998544 458999999864

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.81  E-value=1.9e-09  Score=54.95  Aligned_cols=63  Identities=17%  Similarity=0.097  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||.+............   .....|++||.+.... ....|+|++|+.
T Consensus       118 dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~---~~~~~~~~PE~~~~~~~~~~~Di~slG~i  181 (262)
T cd05572         118 DLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF---CGTPEYVAPEIILNKGYDFSVDYWSLGIL  181 (262)
T ss_pred             CCCHHHEEEcCCCCEEEeeCCcccccCcccccccc---cCCcCccChhHhcCCCCCChhhhhhhHHH
Confidence            78999999999999999999998755432111011   1123599999887544 557899998853

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.80  E-value=8.5e-10  Score=56.75  Aligned_cols=64  Identities=16%  Similarity=0.127  Sum_probs=44.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+........  ..........|++||.+....  ..++|+|++|+.
T Consensus       124 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~  189 (283)
T cd07835         124 DLKPQNLLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCI  189 (283)
T ss_pred             CCCHHHEEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHH
Confidence            7899999999999999999999865432210  111111234589999886543  457999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.80  E-value=9.7e-10  Score=57.02  Aligned_cols=63  Identities=24%  Similarity=0.163  Sum_probs=44.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+..+........   ...+..|++||.+....     ..++|+|++|+.
T Consensus       140 dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  207 (296)
T cd06618         140 DVKPSNILLDASGNVKLCDFGISGRLVDSKAKTR---SAGCAAYMAPERIDPPDPNPKYDIRADVWSLGIS  207 (296)
T ss_pred             CCcHHHEEEcCCCCEEECccccchhccCCCcccC---CCCCccccCHhhcCCCCCccccccchhHHHHHHH
Confidence            7899999999999999999999865432221111   11234599999987432     357899998853

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0670|consensus

Probab=98.80  E-value=4.6e-09  Score=58.86  Aligned_cols=62  Identities=18%  Similarity=0.104  Sum_probs=43.8

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      +|+||.|||+... ..+|++|||-+.....++..  .+  .+..-|-|||++.+-. ....|+|+.|+
T Consensus       560 aDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit--PY--LVSRFYRaPEIiLG~~yd~~iD~WSvgc  623 (752)
T KOG0670|consen  560 ADIKPDNILVNESKNILKLCDFGSASFASENEIT--PY--LVSRFYRAPEIILGLPYDYPIDTWSVGC  623 (752)
T ss_pred             cccCccceEeccCcceeeeccCcccccccccccc--HH--HHHHhccCcceeecCcccCCccceeece
Confidence            4899999999865 56799999988765444311  11  1122367999999766 45889997764

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.80  E-value=8.1e-10  Score=56.72  Aligned_cols=65  Identities=12%  Similarity=0.115  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+......... ..........|++||.+.+..  ..++|+|++|+.
T Consensus       125 dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~  191 (287)
T cd07840         125 DIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCI  191 (287)
T ss_pred             cCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHH
Confidence            78999999999999999999988754433210 011111234589999876432  457999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0610|consensus

Probab=98.80  E-value=2.3e-09  Score=58.15  Aligned_cols=24  Identities=25%  Similarity=0.292  Sum_probs=21.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVV   24 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~   24 (69)
                      .||||+|||+-.+|++.+.||=++
T Consensus       203 RDLKPENILvredGHIMLsDFDLS  226 (459)
T KOG0610|consen  203 RDLKPENILVREDGHIMLSDFDLS  226 (459)
T ss_pred             ccCCcceeEEecCCcEEeeecccc
Confidence            489999999999999999998654

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.80  E-value=8e-10  Score=56.81  Aligned_cols=65  Identities=17%  Similarity=0.043  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.............  ..+..|++||.+.+..  ..++|+|++|+.
T Consensus       124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~--~~~~~~~aPE~~~~~~~~~~~~Di~slG~i  190 (286)
T cd07847         124 RDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY--VATRWYRAPELLVGDTQYGPPVDVWAIGCV  190 (286)
T ss_pred             cCCChhhEEEcCCCcEEECccccceecCCCcccccCc--ccccccCCHHHHhCCCCcCchhhhHHHHHH
Confidence            3789999999999999999999987654322111111  1134589999986533  457999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0665|consensus

Probab=98.79  E-value=3.1e-09  Score=56.24  Aligned_cols=62  Identities=19%  Similarity=0.206  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeE-EeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRW-MAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .||||.||++..+...|+.+||+++.-...  .....  .+-.|| -|||++.+.. ...+|+|+-|+
T Consensus       142 RdLkPsnivv~~~~~lKi~dfg~ar~e~~~--~~mtp--yVvtRyyrapevil~~~~ke~vdiwSvGc  205 (369)
T KOG0665|consen  142 RDLKPSNIVVNSDCTLKILDFGLARTEDTD--FMMTP--YVVTRYYRAPEVILGMGYKENVDIWSVGC  205 (369)
T ss_pred             cccCcccceecchhheeeccchhhcccCcc--cccCc--hhheeeccCchheeccCCcccchhhhhhh
Confidence            389999999999999999999999753222  01110  122345 5999999765 56899998875

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.79  E-value=2e-09  Score=54.79  Aligned_cols=64  Identities=14%  Similarity=0.098  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........   .......|++||.+.... ..++|+|++|+.
T Consensus       124 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~  188 (258)
T cd05578         124 RDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT---STSGTPGYMAPEVLCRQGYSVAVDWWSLGVT  188 (258)
T ss_pred             cCCCHHHeEEcCCCCEEEeecccccccCCCcccc---ccCCChhhcCHHHHcccCCCCcccchhhHHH
Confidence            3789999999999999999999887543321111   111234589999988655 568999999864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.79  E-value=2.6e-10  Score=57.81  Aligned_cols=65  Identities=17%  Similarity=0.145  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc-cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV-KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~-~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ ..... .....|+|||... ... ...+|+|+.|+.
T Consensus       122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~-~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  188 (260)
T PF00069_consen  122 RDIKPENILLDENGEVKLIDFGSSVKLSENNE-NFNPF-VGTPEYMAPEVLQQGKKYTRKSDIWSLGII  188 (260)
T ss_dssp             SSBSGGGEEESTTSEEEESSGTTTEESTSTTS-EBSSS-SSSGGGSCHHHHTTTSSBSTHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccc-ccccc-cccccccccccccccccccccccccccccc
Confidence            48999999999999999999999864311111 11111 1233589999987 433 568999987753

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.78  E-value=1.2e-09  Score=55.28  Aligned_cols=62  Identities=13%  Similarity=-0.047  Sum_probs=43.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.+||.........   .  .......|++||...... ....|+|++|+.
T Consensus       109 ~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i  171 (237)
T cd05576         109 RDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---D--GEAVENMYCAPEVGGISEETEACDWWSLGAI  171 (237)
T ss_pred             cCCCHHHEEEcCCCCEEEecccchhcccccc---c--cCCcCccccCCcccCCCCCCchhhHHHHHHH
Confidence            3799999999999999999999775443211   0  111123499999886544 457899988753

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1027|consensus

Probab=98.78  E-value=5.2e-09  Score=60.62  Aligned_cols=65  Identities=20%  Similarity=0.200  Sum_probs=45.4

Q ss_pred             CCcccceeEEcC---C--CeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEE
Q psy10556          1 MAESTKNCLVHA---G--YSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~---~--~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~   65 (69)
                      .|+||+|||+..   +  ...++.|||++..+...+ ..+...+..++-.|.|||.+.... ...+|+.+.|
T Consensus       630 RDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslG  701 (903)
T KOG1027|consen  630 RDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLG  701 (903)
T ss_pred             ccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcC
Confidence            489999999976   2  467899999998765332 222333333455799999999866 4567776655

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.78  E-value=7.2e-10  Score=57.00  Aligned_cols=64  Identities=22%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+............  ......|++||.+.... ..+.|+|++|+.
T Consensus       126 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~y~apE~~~~~~~~~~~Dv~slG~i  190 (277)
T cd06640         126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGIT  190 (277)
T ss_pred             CCChhhEEEcCCCCEEEcccccceeccCCcccccc--ccCcccccCHhHhccCCCccHHHHHHHHHH
Confidence            78999999999999999999998765432211111  11234589999987654 558999998854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.78  E-value=3.1e-09  Score=55.46  Aligned_cols=61  Identities=21%  Similarity=0.141  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.......   ..   ..+..|++||.+..   .. ...+|+|++|+.
T Consensus       139 ~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~---~~---~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i  203 (307)
T cd06607         139 RDIKAGNILLTEPGTVKLADFGSASLVSPAN---SF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  203 (307)
T ss_pred             cCCCcccEEECCCCCEEEeecCcceecCCCC---Cc---cCCccccCceeeeccCCCCCCcccchHHHHHH
Confidence            3789999999999999999999886433221   11   11235999998742   22 457999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.78  E-value=9.8e-10  Score=55.27  Aligned_cols=64  Identities=22%  Similarity=0.198  Sum_probs=45.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.+||.+...........   ......|++||.+.... ..+.|+|++|+.
T Consensus       122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~---~~~~~~~~~PE~~~~~~~~~~~Dv~slG~i  186 (253)
T cd05122         122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT---MVGTPYWMAPEVINGKPYDYKADIWSLGIT  186 (253)
T ss_pred             CCCCHHHEEEccCCeEEEeeccccccccccccccc---eecCCcccCHHHHcCCCCCccccHHHHHHH
Confidence            37899999999999999999998875543321001   11123589999987655 458999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.78  E-value=1.7e-09  Score=54.85  Aligned_cols=64  Identities=17%  Similarity=0.129  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.+ ..+++.+|+.+..........   ....+..|++||.+.... ..+.|+|++|++
T Consensus       125 ~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  190 (256)
T cd08220         125 RDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY---TVVGTPCYISPELCEGKPYNQKSDIWALGCV  190 (256)
T ss_pred             CCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc---ccccCCcccCchhccCCCCCcccchHHHHHH
Confidence            3789999999755 467999999887543322111   111234599999988655 568999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.78  E-value=1.3e-09  Score=56.30  Aligned_cols=65  Identities=12%  Similarity=0.106  Sum_probs=44.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      |++++||+++.++.+++.|||++......... .......+..|++||.+....   ....|+|++|+.
T Consensus       130 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~  197 (290)
T cd05613         130 DIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL  197 (290)
T ss_pred             CCCHHHeEECCCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHH
Confidence            78999999999999999999988754322111 111111234599999987432   357999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.78  E-value=1.2e-09  Score=57.85  Aligned_cols=62  Identities=21%  Similarity=0.108  Sum_probs=44.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.......    . .......|++||.+....  ..++|+|++|+.
T Consensus       141 ~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~----~-~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi  204 (342)
T cd07879         141 RDLKPGNLAVNEDCELKILDFGLARHADAEM----T-GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI  204 (342)
T ss_pred             CCCCHHHEEECCCCCEEEeeCCCCcCCCCCC----C-CceeeecccChhhhcCccccCchHHHHHHHHH
Confidence            3789999999999999999999986532211    0 111134589999987532  457999999864

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.77  E-value=7.8e-10  Score=56.12  Aligned_cols=64  Identities=14%  Similarity=0.181  Sum_probs=45.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+...........  .......|++||.+.... ....|+|++|+.
T Consensus       135 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i  199 (265)
T cd08217         135 DLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK--TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL  199 (265)
T ss_pred             CCCHHHEEEecCCCEEEecccccccccCCccccc--ccccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence            7899999999999999999998876543321111  111234589999987655 457899998853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.77  E-value=1.3e-09  Score=56.51  Aligned_cols=65  Identities=14%  Similarity=0.101  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.+||.+........  ..........|++||.+....  ....|+|++|+.
T Consensus       126 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  192 (298)
T cd07841         126 RDLKPNNLLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCI  192 (298)
T ss_pred             cCCChhhEEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHH
Confidence            37899999999999999999999875433211  111111234589999886433  457999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.77  E-value=3.5e-09  Score=54.44  Aligned_cols=63  Identities=19%  Similarity=0.163  Sum_probs=44.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+............   ..+..|++||.+....  ....|+|++|+.
T Consensus       124 dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~---~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~  188 (283)
T cd07830         124 DLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY---VSTRWYRAPEILLRSTSYSSPVDIWALGCI  188 (283)
T ss_pred             CCChhhEEEcCCCCEEEeecccceeccCCCCcCCC---CCcccccCceeeecCcCcCCccchhhHHHH
Confidence            78999999999999999999988754332211111   1123489999875433  468999998864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.77  E-value=2e-09  Score=55.44  Aligned_cols=64  Identities=22%  Similarity=0.146  Sum_probs=43.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+........  ..........|+|||.+..     .. ..++|+|++|+.
T Consensus       146 dl~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~  215 (282)
T cd06636         146 DIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGIT  215 (282)
T ss_pred             CCCHHHEEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHH
Confidence            7899999999999999999998865432110  0001112345999998763     11 347999998853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0586|consensus

Probab=98.77  E-value=2.8e-09  Score=59.75  Aligned_cols=63  Identities=16%  Similarity=0.037  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i   66 (69)
                      .|||++|++++.+..+|++|||++..+..........+   ..-|.|||+..+..+  ...|+|+-|+
T Consensus       179 rdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cg---sppyAaPEl~~g~~y~gpe~D~Wslgv  243 (596)
T KOG0586|consen  179 RDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCG---SPPYAAPELFNGKKYDGPEVDIWSLGV  243 (596)
T ss_pred             cccchhhcccccccceeeeccccceeecccccccccCC---CCCccChHhhcCcccCCcceehhhhhh
Confidence            48999999999999999999999987654332222211   223999999987653  4788997665

>KOG0604|consensus

Probab=98.76  E-value=5.3e-09  Score=55.27  Aligned_cols=63  Identities=17%  Similarity=0.179  Sum_probs=44.1

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+|++|+|...   +..+|+.|||++..-....  ......+.| .|.|||++-..++ ..-|+|+-||
T Consensus       185 RDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~--~L~TPc~TP-yYvaPevlg~eKydkscdmwSlgV  251 (400)
T KOG0604|consen  185 RDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG--DLMTPCFTP-YYVAPEVLGPEKYDKSCDMWSLGV  251 (400)
T ss_pred             ccCChhheeeecCCCCcceEecccccccccCCCc--cccCCcccc-cccCHHHhCchhcCCCCCccchhH
Confidence            489999999965   4578999999997533222  122223444 3789999987764 4688998775

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.76  E-value=1.3e-09  Score=56.08  Aligned_cols=63  Identities=16%  Similarity=0.064  Sum_probs=44.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||.+..........   .......|++||.+.... ....|+|++|+.
T Consensus       120 di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i  183 (277)
T cd05577         120 DLKPENVLLDDHGNVRISDLGLAVELKGGKKIK---GRAGTPGYMAPEVLQGEVYDFSVDWFALGCT  183 (277)
T ss_pred             CCCHHHEEECCCCCEEEccCcchhhhccCCccc---cccCCCCcCCHHHhcCCCCCchhhhHHHHHH
Confidence            789999999999999999999886543221111   111123589999987655 458999998853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.76  E-value=1.9e-09  Score=56.84  Aligned_cols=67  Identities=18%  Similarity=0.177  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ec-CCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DL-GGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.+||.+......... .. ......+..|++||.+....  ...+|+|++|+.
T Consensus       131 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  201 (334)
T cd07855         131 RDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI  201 (334)
T ss_pred             CCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHH
Confidence            378999999999999999999998654322110 00 00112234588999876532  457999998863

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.76  E-value=1.8e-09  Score=55.41  Aligned_cols=64  Identities=16%  Similarity=0.116  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+........  ..........|++||.+... . ..+.|+|++|+.
T Consensus       123 ~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~  188 (282)
T cd07829         123 DLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCI  188 (282)
T ss_pred             CCChheEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHH
Confidence            7899999999999999999998875433211  11111122458999998765 3 457999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=7.6e-10  Score=57.82  Aligned_cols=67  Identities=15%  Similarity=0.023  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceec---------------------------CCCcccceeEEecccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDL---------------------------GGKSALPIRWMAWESIVK   53 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~aPe~~~~   53 (69)
                      .|+++.||+++.++.+++.|||.+...........                           ......+..|++||.+..
T Consensus       127 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  206 (316)
T cd05574         127 RDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG  206 (316)
T ss_pred             cCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC
Confidence            37999999999999999999998764322110000                           000012345899999876


Q ss_pred             CC-CCCCCceEEEEe
Q psy10556         54 VP-SQDGPSQSYRIF   67 (69)
Q Consensus        54 ~~-~~~~~~w~~~i~   67 (69)
                      .. ...+|+|++|+.
T Consensus       207 ~~~~~~~Di~slG~l  221 (316)
T cd05574         207 DGHGSAVDWWTLGIL  221 (316)
T ss_pred             CCCCchHHHHHHHHH
Confidence            55 457899998853

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.75  E-value=3.5e-09  Score=54.44  Aligned_cols=63  Identities=21%  Similarity=0.148  Sum_probs=43.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC----C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV----P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~----~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.++.+.........   .....|++||.+...    . ...+|+|++|+.
T Consensus       129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~  196 (283)
T cd06617         129 DVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTID---AGCKPYMAPERINPELNQKGYDVKSDVWSLGIT  196 (283)
T ss_pred             CCCHHHEEECCCCCEEEeecccccccccccccccc---cCCccccChhhcCCcccccccCccccchhhHHH
Confidence            78999999999999999999998754322111101   112348999987642    1 357899998853

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.75  E-value=5.1e-09  Score=58.42  Aligned_cols=52  Identities=21%  Similarity=0.230  Sum_probs=35.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK   53 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~   53 (69)
                      .|+|+.||+++.++.+++.|||++............ .......|++||.+..
T Consensus       333 rDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~-~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        333 RDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPL-YGMLDPRYSPPEELVM  384 (507)
T ss_pred             CCCchHhEEECCCCcEEEEeCcCccccccCCccCcc-ccCCCcceeChhhhcC
Confidence            489999999999999999999998654322111111 1112346999998763

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.75  E-value=2.1e-09  Score=55.76  Aligned_cols=66  Identities=14%  Similarity=0.095  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+......... .......+..|++||.+....  ...+|+|++|+.
T Consensus       140 ~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  207 (302)
T cd07864         140 RDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI  207 (302)
T ss_pred             CCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence            378999999999999999999988754332210 001111234599999876432  457999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0596|consensus

Probab=98.75  E-value=3.9e-09  Score=59.16  Aligned_cols=65  Identities=14%  Similarity=0.163  Sum_probs=43.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC------------CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP------------SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------------~~~~~~w~~~i   66 (69)
                      .||||.|.|+- .|.+|++|||++..+.............++.-||+||.+....            ...+|+|+.|.
T Consensus       484 SDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGC  560 (677)
T KOG0596|consen  484 SDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGC  560 (677)
T ss_pred             cCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhh
Confidence            48999998775 5789999999997654332111111123345699999998532            24689998763

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.75  E-value=2.9e-09  Score=54.37  Aligned_cols=64  Identities=22%  Similarity=0.136  Sum_probs=43.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC------CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP------SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+.........  ......+..|+|||.+....      ..++|+|++|+.
T Consensus       138 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i  207 (275)
T cd06608         138 DIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGIT  207 (275)
T ss_pred             CCCHHHEEEccCCeEEECCCccceecccchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHH
Confidence            78999999999999999999988654322111  11111234599999875321      346899999863

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.74  E-value=1.8e-09  Score=56.12  Aligned_cols=67  Identities=13%  Similarity=0.071  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecC---------CCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLG---------GKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||+++...........         ........|+|||.+....  ....|+|++|+.
T Consensus       139 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  216 (311)
T cd07866         139 RDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV  216 (311)
T ss_pred             CCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence            378999999999999999999988754322110000         0001123489999876543  457999999853

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0603|consensus

Probab=98.74  E-value=1.5e-09  Score=60.95  Aligned_cols=60  Identities=17%  Similarity=0.128  Sum_probs=47.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEec
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIFN   68 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~~   68 (69)
                      |+|++||+++.+|.+++.|||+++.+...+..      ++..-|||||++. +.....|.|+||+++
T Consensus       122 d~k~enilld~~Ghi~~tdfglske~v~~~~~------cgt~eymApEI~~-gh~~a~D~ws~gvl~  181 (612)
T KOG0603|consen  122 DYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------CGTYEYRAPEIIN-GHLSAADWWSFGVLA  181 (612)
T ss_pred             cccccceeecccCccccCCchhhhHhHhhhhc------ccchhhhhhHhhh-ccCCcccchhhhhhH
Confidence            67899999999999999999999876544322      2235599999998 456789999999864

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.73  E-value=2.7e-09  Score=55.65  Aligned_cols=67  Identities=18%  Similarity=0.164  Sum_probs=44.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc---ee----------cCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY---YD----------LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++..+.+++.+||.++.......   ..          .......+..|++||.+.... ..++|+|++|+
T Consensus       125 ~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  204 (305)
T cd05609         125 RDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGI  204 (305)
T ss_pred             cCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHH
Confidence            37899999999999999999998753110000   00          000011234599999987654 56899999885


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       205 v  205 (305)
T cd05609         205 I  205 (305)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.73  E-value=1.8e-09  Score=54.91  Aligned_cols=64  Identities=19%  Similarity=0.134  Sum_probs=45.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+..........  ........|++||.+.... ..+.|+|++|+.
T Consensus       125 ~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  189 (264)
T cd06623         125 DIKPSNLLINSKGEVKIADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLT  189 (264)
T ss_pred             CCCHHHEEECCCCCEEEccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence            789999999999999999999887554322111  0111234589999987665 458999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.73  E-value=1.8e-09  Score=56.11  Aligned_cols=64  Identities=20%  Similarity=0.206  Sum_probs=44.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+...........  ....+..|++||.+.... ..+.|+|++|+.
T Consensus       141 dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvi  205 (292)
T cd06657         141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--SLVGTPYWMAPELISRLPYGPEVDIWSLGIM  205 (292)
T ss_pred             CCCHHHEEECCCCCEEEcccccceeccccccccc--ccccCccccCHHHhcCCCCCchhhHHHHHHH
Confidence            7899999999999999999998764432210000  111234599999887544 457999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.72  E-value=7.1e-10  Score=56.48  Aligned_cols=63  Identities=24%  Similarity=0.128  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........    ......|++||.+.... ..++|+|++|+.
T Consensus       125 ~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~  188 (265)
T cd06605         125 RDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT----FVGTSSYMAPERIQGNDYSVKSDIWSLGLS  188 (265)
T ss_pred             CCCCHHHEEECCCCCEEEeecccchhhHHHHhhc----ccCChhccCHHHHcCCCCCchhhHHHHHHH
Confidence            3789999999999999999999886543221111    11234599999987655 457999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.72  E-value=3.5e-09  Score=54.85  Aligned_cols=65  Identities=15%  Similarity=0.116  Sum_probs=43.2

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++. +..+++.|||++........  .......+..|++||.+.+..  ...+|+|++|+.
T Consensus       126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i  193 (294)
T PLN00009        126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCI  193 (294)
T ss_pred             CCCCcceEEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHH
Confidence            378999999985 56789999999865432210  001111234589999886533  457999998864

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.72  E-value=1.3e-09  Score=56.24  Aligned_cols=62  Identities=23%  Similarity=0.124  Sum_probs=44.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||++........  .  ....+..|++||.+.... ....|+|++|+.
T Consensus       129 dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~--~--~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~  191 (284)
T cd06620         129 DIKPSNILVNSRGQIKLCDFGVSGELINSIA--D--TFVGTSTYMSPERIQGGKYTVKSDVWSLGIS  191 (284)
T ss_pred             CCCHHHEEECCCCcEEEccCCcccchhhhcc--C--ccccCcccCCHHHHccCCCCccchHHHHHHH
Confidence            7899999999999999999998864322110  1  112235699999887654 568999998853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.72  E-value=1.8e-09  Score=55.10  Aligned_cols=67  Identities=19%  Similarity=0.127  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc----eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY----YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+........    .........+..|++||.+.... ...+|+|++|+.
T Consensus       126 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~  197 (265)
T cd06631         126 RDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCT  197 (265)
T ss_pred             CCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHH
Confidence            37899999999999999999998864321110    00000111234589999987655 468999998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.72  E-value=2.1e-09  Score=55.21  Aligned_cols=63  Identities=16%  Similarity=0.147  Sum_probs=43.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++. +.+++.+||.+............   ..+..|++||.+..+.  ...+|+|++|+.
T Consensus       124 ~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~~Di~slGv~  188 (282)
T cd07831         124 RDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEY---ISTRWYRAPECLLTDGYYGPKMDIWAVGCV  188 (282)
T ss_pred             cccCHHHEEEcC-CCeEEEecccccccccCCCcCCC---CCCcccCChhHhhcCCCCCcchhHHHHHHH
Confidence            378999999999 99999999998754322111111   1234589999765433  457999998864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.71  E-value=2.7e-09  Score=56.07  Aligned_cols=67  Identities=16%  Similarity=0.143  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.+||.+......... ...........|++||.+... . ...+|+|++|+.
T Consensus       127 ~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i  196 (330)
T cd07834         127 RDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI  196 (330)
T ss_pred             CCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence            379999999999999999999988754332110 001111123348899998865 3 457999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.70  E-value=2.5e-09  Score=53.97  Aligned_cols=66  Identities=21%  Similarity=0.166  Sum_probs=46.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+|+.+....................|++||...... ..++|+|++|+.
T Consensus       126 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  192 (260)
T cd06606         126 DIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCT  192 (260)
T ss_pred             CCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHH
Confidence            789999999999999999999887654432100011112234599999987664 568999988754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.70  E-value=3e-09  Score=54.94  Aligned_cols=65  Identities=17%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||+++.+........ .....+..|++||.+....   ....|+|++|+.
T Consensus       130 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~i  197 (288)
T cd05583         130 DIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA-YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVL  197 (288)
T ss_pred             CCCHHHeEECCCCCEEEEECcccccccccccccc-ccccCCccccCHHHhcCCCCCCcchhhhHHHHHH
Confidence            7899999999999999999998876543321111 1111244699999987543   457899988753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.70  E-value=3.3e-09  Score=54.74  Aligned_cols=64  Identities=22%  Similarity=0.203  Sum_probs=44.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+|+.+......... .. .......|++||.+.... ...+|+|++|+.
T Consensus       141 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvi  205 (286)
T cd06614         141 DIKSDNILLSKDGSVKLADFGFAAQLTKEKSK-RN-SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIM  205 (286)
T ss_pred             CCChhhEEEcCCCCEEECccchhhhhccchhh-hc-cccCCcccCCHhHhcCCCCCCccccHHHHHH
Confidence            78999999999999999999987643322110 00 111123589999887654 568999998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.70  E-value=2.4e-09  Score=54.32  Aligned_cols=67  Identities=15%  Similarity=0.085  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce------ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY------DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||++.........      ...........|++||...... ....|+|++|+.
T Consensus       117 ~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~  190 (265)
T cd05579         117 RDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCI  190 (265)
T ss_pred             CCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHH
Confidence            378999999999999999999987643322100      0001111234589999887655 458999988754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4250|consensus

Probab=98.69  E-value=6e-09  Score=59.43  Aligned_cols=64  Identities=13%  Similarity=0.096  Sum_probs=44.9

Q ss_pred             CCcccceeEEcC----CCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA----GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~----~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+||.||++-.    ...-|++|||.++.+.........   .++.-|++||.... .. ...+|.||||+-
T Consensus       144 RDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~---vGT~~YLhPel~E~q~~y~~tVDLWS~Gvt  213 (732)
T KOG4250|consen  144 RDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSL---VGTEEYLHPELYERQKKYTATVDLWSFGVT  213 (732)
T ss_pred             ccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeee---cCchhhcChHHHhhccCcCceeehhhhhhH
Confidence            589999999842    234599999999987655422111   22345999998874 44 358999999973

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.69  E-value=5e-09  Score=53.45  Aligned_cols=61  Identities=21%  Similarity=0.186  Sum_probs=41.7

Q ss_pred             CCcccceeEEcCCCe--------EEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS--------IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~--------~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.        +++.+||.+........   .   .....|++||.+....  ...+|+|++|+.
T Consensus       124 ~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~---~---~~~~~y~aPE~~~~~~~~~~~~DiwslG~~  194 (258)
T cd05078         124 GNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI---L---LERIPWVPPECIENPQNLSLAADKWSFGTT  194 (258)
T ss_pred             CCCccceEEEecccccccCCCceEEecccccccccCCchh---c---cccCCccCchhccCCCCCCchhhHHHHHHH
Confidence            489999999976654        68899988764332211   1   1123499999987633  457999998853

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.69  E-value=3.7e-09  Score=56.09  Aligned_cols=62  Identities=18%  Similarity=0.070  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.......   .  ....+..|+|||.+....  ..+.|+|++|+.
T Consensus       144 ~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i  207 (345)
T cd07877         144 RDLKPSNLAVNEDCELKILDFGLARHTDDEM---T--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  207 (345)
T ss_pred             cCCChHHEEEcCCCCEEEecccccccccccc---c--ccccCCCccCHHHHhCccCCCchhhHHHHHHH
Confidence            4789999999999999999999886532211   1  111134589999876532  457999998864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.68  E-value=4.3e-09  Score=53.84  Aligned_cols=65  Identities=25%  Similarity=0.199  Sum_probs=43.5

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+++.||+++. .+.+++.+||.+...........  ....+..|++||.+....   ...+|+|++|+.
T Consensus       132 ~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvv  200 (268)
T cd06624         132 RDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE--TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCT  200 (268)
T ss_pred             cCCCHHHEEEcCCCCeEEEecchhheecccCCCccc--cCCCCccccChhhhccccccCCchhhhHHHHHH
Confidence            378999999976 67899999998865432211111  111234599999886432   457899998863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.67  E-value=3.1e-09  Score=62.87  Aligned_cols=64  Identities=11%  Similarity=0.093  Sum_probs=42.4

Q ss_pred             CCcccceeEEcC-----------------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCC
Q psy10556          1 MAESTKNCLVHA-----------------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGP   60 (69)
Q Consensus         1 ~dl~~~nil~~~-----------------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~   60 (69)
                      .||||.||+++.                 ...++++|||++..........   ....+..|+|||++....   ...+|
T Consensus       149 RDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~---s~vGTp~YmAPEvL~ge~~~~s~KSD  225 (1021)
T PTZ00266        149 RDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH---SCVGTPYYWSPELLLHETKSYDDKSD  225 (1021)
T ss_pred             ccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccccc---ccCCCccccCHHHHhccCCCCCchhH
Confidence            389999999964                 2358999999987543221111   111234599999986422   35789


Q ss_pred             ceEEEEe
Q psy10556         61 SQSYRIF   67 (69)
Q Consensus        61 ~w~~~i~   67 (69)
                      +|++|+.
T Consensus       226 VWSLG~I  232 (1021)
T PTZ00266        226 MWALGCI  232 (1021)
T ss_pred             HHHHHHH
Confidence            9998864

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.67  E-value=3.5e-09  Score=54.48  Aligned_cols=64  Identities=22%  Similarity=0.185  Sum_probs=44.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||++............  ......|++||.+.... ....|+|++|+.
T Consensus       126 dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~  190 (277)
T cd06641         126 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGIT  190 (277)
T ss_pred             CCCHHhEEECCCCCEEEeecccceecccchhhhcc--ccCCccccChhhhccCCCCchhhHHHHHHH
Confidence            78999999999999999999988654332211100  11123489999987654 457899998853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.67  E-value=2.5e-09  Score=54.99  Aligned_cols=64  Identities=14%  Similarity=0.124  Sum_probs=44.1

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+........  ..........|++||.+....  ...+|+|++|+.
T Consensus       125 dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~  190 (284)
T cd07836         125 DLKPQNLLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCI  190 (284)
T ss_pred             CCCHHHEEECCCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHH
Confidence            7899999999999999999998865432210  111111123589999886543  457899998864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.67  E-value=4.7e-09  Score=53.45  Aligned_cols=60  Identities=20%  Similarity=0.159  Sum_probs=44.0

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||++.......   ..   .....|++||.+.... ...+|+|++|+.
T Consensus       122 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---~~---~~~~~y~~pe~~~~~~~~~~~Dv~slG~i  182 (260)
T cd05611         122 DIKPENLLIDQTGHLKLTDFGLSRNGLENK---KF---VGTPDYLAPETILGVGDDKMSDWWSLGCV  182 (260)
T ss_pred             CCCHHHeEECCCCcEEEeecccceeccccc---cC---CCCcCccChhhhcCCCCcchhhhHHHHHH
Confidence            789999999999999999999886432211   11   1123489999987655 558999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.67  E-value=4.2e-09  Score=54.16  Aligned_cols=64  Identities=20%  Similarity=0.123  Sum_probs=43.0

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+...........  ....+..|++||.+...     . ...+|+|++|+.
T Consensus       128 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~i  197 (280)
T cd06611         128 DLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD--TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGIT  197 (280)
T ss_pred             CCChhhEEECCCCCEEEccCccchhhcccccccc--eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHH
Confidence            7899999999999999999998764322211111  11123458999987522     1 347999998863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.66  E-value=8.8e-09  Score=54.06  Aligned_cols=61  Identities=21%  Similarity=0.119  Sum_probs=43.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.......   ..   .....|++||.+..   +. ..++|+|++|+.
T Consensus       149 ~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~---~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvi  213 (317)
T cd06635         149 RDIKAGNILLTEPGQVKLADFGSASIASPAN---SF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  213 (317)
T ss_pred             CCCCcccEEECCCCCEEEecCCCccccCCcc---cc---cCCccccChhhhhcCCCCCCCccccHHHHHHH
Confidence            4789999999999999999999876432211   11   11235999998742   22 457999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.66  E-value=5.7e-09  Score=54.49  Aligned_cols=67  Identities=12%  Similarity=0.116  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-----ecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-----DLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.+|+.+.........     ........+..|++||.+....   ...+|+|++|+.
T Consensus       125 ~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~i  199 (314)
T cd08216         125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGIT  199 (314)
T ss_pred             CCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHH
Confidence            489999999999999999999977543221110     0001111234589999987532   357999998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.66  E-value=6.6e-09  Score=54.32  Aligned_cols=60  Identities=22%  Similarity=0.152  Sum_probs=43.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+........   .   ..+..|++||.+..   +. ..++|+|++|+.
T Consensus       140 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~---~---~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i  203 (308)
T cd06634         140 DVKAGNILLSEPGLVKLGDFGSASIMAPANX---F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  203 (308)
T ss_pred             CCCHHhEEECCCCcEEECCcccceeecCccc---c---cCCccccCHHHHhhcccCCCCcccchHHHHHH
Confidence            7899999999999999999998865432211   1   11345999998752   22 457999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.66  E-value=4.3e-09  Score=53.17  Aligned_cols=64  Identities=13%  Similarity=0.096  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.||+.+...........  .......|++||...... ....|+|++|+.
T Consensus       128 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  192 (258)
T cd08215         128 DIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAK--TVVGTPYYLSPELCQNKPYNYKSDIWSLGCV  192 (258)
T ss_pred             cCChHHeEEcCCCcEEECCccceeecccCcceec--ceeeeecccChhHhccCCCCccccHHHHHHH
Confidence            7899999999999999999998865433221111  111234589999887655 568999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.66  E-value=2.8e-09  Score=54.57  Aligned_cols=66  Identities=15%  Similarity=0.134  Sum_probs=45.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcce------------------ecCCCcccceeEEeccccccCC-CCCCCce
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYY------------------DLGGKSALPIRWMAWESIVKVP-SQDGPSQ   62 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w   62 (69)
                      |+++.|++++.++.+++.|||.+.........                  ........+..|++||...... ..+.|+|
T Consensus       127 dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~  206 (280)
T cd05581         127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLW  206 (280)
T ss_pred             CCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHH
Confidence            78999999999999999999988654322110                  0001111234689999887655 4579999


Q ss_pred             EEEEe
Q psy10556         63 SYRIF   67 (69)
Q Consensus        63 ~~~i~   67 (69)
                      ++|++
T Consensus       207 slG~~  211 (280)
T cd05581         207 ALGCI  211 (280)
T ss_pred             HHHHH
Confidence            88754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0608|consensus

Probab=98.64  E-value=1.4e-08  Score=58.22  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=24.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|+|+.|||++.++.+|+.|||++..+
T Consensus       753 RDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  753 RDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             cccCccceEEccCCceeeeeccccccc
Confidence            489999999999999999999998644

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.63  E-value=9.9e-09  Score=52.24  Aligned_cols=66  Identities=18%  Similarity=0.039  Sum_probs=45.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecC--CCcccceeEEeccccccCC----CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLG--GKSALPIRWMAWESIVKVP----SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.+||.+............  .....+..|++||.+....    ...+|+|++|+
T Consensus       123 ~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~  194 (264)
T cd06626         123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGC  194 (264)
T ss_pred             CCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHH
Confidence            378999999999999999999988754432211111  0111234699999987543    45799999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG1989|consensus

Probab=98.63  E-value=1.5e-09  Score=62.26  Aligned_cols=67  Identities=12%  Similarity=0.057  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccc-cccC-cc-----eecCCCcccceeEEecccccc--CC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRN-LYAA-DY-----YDLGGKSALPIRWMAWESIVK--VP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~-~~~~-~~-----~~~~~~~~~~~~~~aPe~~~~--~~--~~~~~~w~~~i~   67 (69)
                      +|||.+|+|+..++..||+|||-+.. +... ..     .........+.-|-+||++--  +.  ..++|+|+-|+|
T Consensus       170 RDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGcl  247 (738)
T KOG1989|consen  170 RDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCL  247 (738)
T ss_pred             hhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHH
Confidence            58999999999999999999996532 2211 10     011111122334889999863  22  578999987765

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.62  E-value=6.8e-09  Score=52.63  Aligned_cols=63  Identities=19%  Similarity=0.184  Sum_probs=44.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.+||.+...........   ......|++||.+....  ....|+|++|+.
T Consensus       127 dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~---~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~  191 (258)
T cd06632         127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS---FKGSPYWMAPEVIAQQGGYGLAADIWSLGCT  191 (258)
T ss_pred             CCCHHHEEECCCCCEEEccCccceeccccccccc---cCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence            7899999999999999999998865433221111   11234589999886543  457999998853

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.62  E-value=5.1e-09  Score=55.50  Aligned_cols=62  Identities=18%  Similarity=0.072  Sum_probs=44.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++.++.+++.|||.+.......   .  ....+..|++||.+....  ..++|+|++|+.
T Consensus       142 ~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~  205 (343)
T cd07851         142 RDLKPSNIAVNEDCELKILDFGLARHTDDEM---T--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             CCCCHHHeEECCCCCEEEccccccccccccc---c--CCcccccccCHHHHhCCCCCCchHhHHHHHHH
Confidence            3789999999999999999999987543221   0  111234589999886532  457999998854

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.61  E-value=4.2e-09  Score=54.04  Aligned_cols=64  Identities=16%  Similarity=0.076  Sum_probs=44.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      |+++.||+++.++.+++.|||.+........  ..........|++||.+... . ..++|+|++|+.
T Consensus       123 dl~p~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~  188 (283)
T cd05118         123 DLKPENLLINTEGVLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCI  188 (283)
T ss_pred             CcCHHHEEECCCCcEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHH
Confidence            7899999999999999999998865543220  00011112348899998765 3 457999988753

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0671|consensus

Probab=98.60  E-value=9.6e-08  Score=51.64  Aligned_cols=61  Identities=20%  Similarity=0.065  Sum_probs=37.8

Q ss_pred             CCcccceeEEcCCC--------------------eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCC
Q psy10556          1 MAESTKNCLVHAGY--------------------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDG   59 (69)
Q Consensus         1 ~dl~~~nil~~~~~--------------------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~   59 (69)
                      .||||+||++..+.                    .++++|||-+..-...  +..   ...+..|-|||++.+-. ....
T Consensus       216 TDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~---iVsTRHYRAPEViLgLGwS~pC  290 (415)
T KOG0671|consen  216 TDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HST---IVSTRHYRAPEVILGLGWSQPC  290 (415)
T ss_pred             cCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC--cce---eeeccccCCchheeccCcCCcc
Confidence            48999999986433                    2455666655431111  111   01123478999999743 7799


Q ss_pred             CceEEEE
Q psy10556         60 PSQSYRI   66 (69)
Q Consensus        60 ~~w~~~i   66 (69)
                      |+||+|.
T Consensus       291 DvWSiGC  297 (415)
T KOG0671|consen  291 DVWSIGC  297 (415)
T ss_pred             Cceeeee
Confidence            9999983

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.60  E-value=9.5e-09  Score=53.00  Aligned_cols=61  Identities=23%  Similarity=0.139  Sum_probs=40.8

Q ss_pred             CCcccceeEEcCCC-------eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++..+       .+++.+||.+.......   ..   ..+..|++||.+....  ..++|+|++|+.
T Consensus       141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~---~~---~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~  210 (274)
T cd05076         141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE---ER---VERIPWIAPECVPGGNSLSTAADKWSFGTT  210 (274)
T ss_pred             CCCCcccEEEeccCcccCccceeeecCCcccccccccc---cc---ccCCcccCchhhcCCCCCCcHHHHHHHHHH
Confidence            48999999997543       47899999875432211   11   1123499999887533  457999998863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.60  E-value=1.1e-08  Score=51.88  Aligned_cols=62  Identities=21%  Similarity=0.117  Sum_probs=44.9

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+....... ....   .....|++||.+.... ....|+|++|+.
T Consensus       128 ~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~-~~~~---~~~~~~~~Pe~~~~~~~~~~~D~~slG~~  190 (256)
T cd08530         128 DLKSANILLVANDLVKIGDLGISKVLKKNM-AKTQ---IGTPHYMAPEVWKGRPYSYKSDIWSLGCL  190 (256)
T ss_pred             CCCcceEEEecCCcEEEeeccchhhhccCC-cccc---cCCccccCHHHHCCCCCCchhhHHHHHHH
Confidence            789999999999999999999886543321 1111   1134589999987655 447999998854

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.58  E-value=1.2e-08  Score=51.55  Aligned_cols=64  Identities=22%  Similarity=0.157  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.||+.+.........  .........|++||...... ....|+|++|+
T Consensus       123 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~  187 (254)
T cd06627         123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGC  187 (254)
T ss_pred             CCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHH
Confidence            378999999999999999999988765433211  11111234599999887544 45789998775

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.57  E-value=6.9e-09  Score=52.64  Aligned_cols=65  Identities=14%  Similarity=0.122  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++ ..++.+|+.+...........  ....+..|+|||...... ...+|+|++|+.
T Consensus       125 ~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i  191 (257)
T cd08225         125 RDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY--TCVGTPYYLSPEICQNRPYNNKTDIWSLGCV  191 (257)
T ss_pred             ccCCHHHEEEcCCCCeEEecccccchhccCCccccc--ccCCCccccCHHHHcCCCCCchhhHHHHHHH
Confidence            37899999998875 569999998865433211111  111234599999887655 568999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.57  E-value=2.1e-08  Score=50.67  Aligned_cols=64  Identities=17%  Similarity=0.164  Sum_probs=45.0

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+...........  .......|++||...... ..+.|+|++|+.
T Consensus       118 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~  182 (250)
T cd05123         118 DLKPENILLDADGHIKLTDFGLAKELSSEGSRTN--TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVL  182 (250)
T ss_pred             CCCcceEEEcCCCcEEEeecCcceecccCCCccc--CCcCCccccChHHhCCCCCCchhhHHHHHHH
Confidence            7899999999999999999998875433211111  111234599999987654 457999988753

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0590|consensus

Probab=98.56  E-value=6e-08  Score=55.21  Aligned_cols=66  Identities=17%  Similarity=0.047  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-cc-eecCCCcccceeEEeccccccCCC--CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DY-YDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i   66 (69)
                      +|+|++|+++...+.+|++|||.+..+... +. .....+..+.-.|+|||.+....+  ..+|+|+-||
T Consensus       444 rdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~i  513 (601)
T KOG0590|consen  444 RDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGI  513 (601)
T ss_pred             ccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccc
Confidence            589999999999999999999998765422 21 011112222334999999987653  4789998765

>KOG2345|consensus

Probab=98.56  E-value=9.7e-09  Score=52.98  Aligned_cols=66  Identities=11%  Similarity=-0.052  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-----cce--ecCCCcccceeEEeccccccCC----CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-----DYY--DLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i   66 (69)
                      .|+||.||++...+...+.|||-+......     +..  ........++.|.|||.+.-..    .++.|+||+|.
T Consensus       153 ~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGC  229 (302)
T KOG2345|consen  153 RDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGC  229 (302)
T ss_pred             cCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhH
Confidence            489999999999999999999977543311     100  0001112234489999887432    46899999874

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.56  E-value=1.2e-08  Score=54.08  Aligned_cols=67  Identities=9%  Similarity=0.038  Sum_probs=42.5

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceec-CCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDL-GGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|++++. +..+++.+||.++.......... .........|+|||.+....  ..++|+|++|+.
T Consensus       138 ~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (342)
T cd07854         138 RDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  208 (342)
T ss_pred             CCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence            378999999975 45789999998865432111000 01111233589999876433  457999998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.56  E-value=7e-09  Score=54.69  Aligned_cols=67  Identities=16%  Similarity=0.108  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc------------eecCCCcccceeEEeccccccCC--CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY------------YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.|||.+........            .........+..|++||.+.+..  ....|+|++|+
T Consensus       143 ~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  222 (335)
T PTZ00024        143 RDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGC  222 (335)
T ss_pred             ccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHH
Confidence            37899999999999999999998865431110            00001111234589999987533  45789998875


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       223 ~  223 (335)
T PTZ00024        223 I  223 (335)
T ss_pred             H
Confidence            3

>KOG1152|consensus

Probab=98.55  E-value=4.9e-08  Score=55.36  Aligned_cols=63  Identities=14%  Similarity=0.099  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCC--CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQ--DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~--~~~~w~~~i~   67 (69)
                      .|+|-+|+.++.++.+|++|||-+........ .   ...+...|.|||++.+.++.  ..|+|+-||+
T Consensus       694 rdikdenvivd~~g~~klidfgsaa~~ksgpf-d---~f~gtv~~aapevl~g~~y~gk~qdiwalgil  758 (772)
T KOG1152|consen  694 RDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF-D---VFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL  758 (772)
T ss_pred             cccccccEEEecCCeEEEeeccchhhhcCCCc-c---eeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence            48999999999999999999998864322221 1   11234669999999987753  6889998876

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.55  E-value=2e-08  Score=51.27  Aligned_cols=67  Identities=19%  Similarity=0.120  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecC--CCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLG--GKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++ .+++++||.+............  .....+..|++||.+.... ..+.|+|++|+.
T Consensus       127 ~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~  197 (268)
T cd06630         127 RDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV  197 (268)
T ss_pred             CCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence            37899999998765 6899999998654432110000  0111234699999987544 457999987753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.55  E-value=2.4e-08  Score=52.42  Aligned_cols=60  Identities=22%  Similarity=0.145  Sum_probs=42.4

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||.+.......   ..   .....|++||.+..   .. ...+|+|++|+.
T Consensus       146 dl~p~nili~~~~~~kL~dfg~~~~~~~~~---~~---~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvi  209 (313)
T cd06633         146 DIKAGNILLTEPGQVKLADFGSASKSSPAN---SF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  209 (313)
T ss_pred             CCChhhEEECCCCCEEEeecCCCcccCCCC---Cc---cccccccChhhccccCCCCCCchhhHHHHHHH
Confidence            789999999999999999999875432211   11   11345999999742   22 457899998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.54  E-value=3.8e-08  Score=57.99  Aligned_cols=60  Identities=8%  Similarity=0.081  Sum_probs=40.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.+...++. ++.........      ....+..|+|||.+.... ..++|+|+||+.
T Consensus       807 ~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv  867 (968)
T PLN00113        807 GNLSPEKIIIDGKDEPHLR-LSLPGLLCTDT------KCFISSAYVAPETRETKDITEKSDIYGFGLI  867 (968)
T ss_pred             CCCCHHhEEECCCCceEEE-eccccccccCC------CccccccccCcccccCCCCCcccchhhHHHH
Confidence            4899999999988777654 44433221111      112234699999988765 568999999874

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.53  E-value=2.1e-08  Score=52.87  Aligned_cols=67  Identities=10%  Similarity=0.079  Sum_probs=42.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC-ccee----cCCCcccceeEEeccccccC--C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA-DYYD----LGGKSALPIRWMAWESIVKV--P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~aPe~~~~~--~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.+|+........ ....    .......+..|+|||.+...  . ...+|+|++|+.
T Consensus       125 ~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i  199 (327)
T cd08227         125 RSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT  199 (327)
T ss_pred             CCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHH
Confidence            489999999999999999988754322111 0000    00011123459999998753  2 457999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.50  E-value=2.1e-08  Score=51.91  Aligned_cols=62  Identities=23%  Similarity=0.131  Sum_probs=44.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.|||++.........    ....+..|++||.+.... ....|+|++|+.
T Consensus       130 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  192 (287)
T cd06621         130 DIKPSNILLTRKGQVKLCDFGVSGELVNSLAG----TFTGTSFYMAPERIQGKPYSITSDVWSLGLT  192 (287)
T ss_pred             CCCHHHEEEecCCeEEEeeccccccccccccc----cccCCccccCHHHhcCCCCCchhhHHHHHHH
Confidence            78999999999999999999998654322110    111234589999887655 557899987753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.48  E-value=1.2e-08  Score=54.10  Aligned_cols=62  Identities=19%  Similarity=0.100  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.......   .  ....+..|++||.+....  ....|+|++|+.
T Consensus       142 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~l  205 (343)
T cd07880         142 RDLKPGNLAVNEDCELKILDFGLARQTDSEM---T--GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCI  205 (343)
T ss_pred             CCCCHHHEEEcCCCCEEEeecccccccccCc---c--ccccCCcccCHHHHhCCCCCCcHHHHHHHHHH
Confidence            3789999999999999999999887532211   0  111134589999887532  457899998854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.46  E-value=2.6e-08  Score=52.63  Aligned_cols=61  Identities=16%  Similarity=0.089  Sum_probs=43.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.+||.+.......   .  ....+..|++||.+....  ...+|+|++|+.
T Consensus       133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  195 (328)
T cd07856         133 DLKPSNILINENCDLKICDFGLARIQDPQM---T--GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCI  195 (328)
T ss_pred             CCCHHHEeECCCCCEEeCccccccccCCCc---C--CCcccccccCceeeeccCCcCcHHHHHHHHHH
Confidence            789999999999999999999886432211   1  111134589999876522  457999998854

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.43  E-value=3.8e-08  Score=51.90  Aligned_cols=67  Identities=15%  Similarity=0.132  Sum_probs=42.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccC---cc--eecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAA---DY--YDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.+|+........   ..  ............|++||.+....   ...+|+|++|+.
T Consensus       125 rDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~  199 (328)
T cd08226         125 RNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT  199 (328)
T ss_pred             CCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH
Confidence            489999999999999999988754322110   00  00000111234599999987542   357899998853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.37  E-value=3.9e-08  Score=49.12  Aligned_cols=63  Identities=17%  Similarity=0.199  Sum_probs=44.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.++.+++.||+.+..........   .......|++||...... ..+.|+|++|+.
T Consensus       112 ~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~  175 (244)
T smart00220      112 DLKPENILLDEDGHVKLADFGLARQLDPGGLLT---TFVGTPEYMAPEVLLGKGYGKAVDVWSLGVI  175 (244)
T ss_pred             CcCHHHeEECCCCcEEEccccceeeeccccccc---cccCCcCCCCHHHHccCCCCchhhHHHHHHH
Confidence            788999999999999999999987654321111   111234589999887544 458999988753

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.35  E-value=7e-08  Score=49.20  Aligned_cols=62  Identities=19%  Similarity=0.121  Sum_probs=41.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      |+++.|++++. +.+++.|||.+.............  .....|++||...... ..+.|+|++|+
T Consensus       131 ~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~--~~~~~~~~pe~~~~~~~~~~~Dv~slG~  193 (260)
T cd08222         131 DLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTF--TGTPYYMSPEALKHQGYDSKSDIWSLGC  193 (260)
T ss_pred             CCChhheEeec-CCEeecccCceeecCCCcccccCC--CCCcCccCHHHHccCCCCchhhHHHHHH
Confidence            78999999975 568999999886543322111111  1123589999876544 45799998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1035|consensus

Probab=98.31  E-value=2.5e-07  Score=55.87  Aligned_cols=66  Identities=17%  Similarity=0.117  Sum_probs=43.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc-------------cCcc---eecCCCcccceeEEeccccccCC----CCCCC
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY-------------AADY---YDLGGKSALPIRWMAWESIVKVP----SQDGP   60 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~aPe~~~~~~----~~~~~   60 (69)
                      .|+||.||.++.+..+|+.|||++....             ....   ....+...++--|+|||.+....    ..+.|
T Consensus       721 RDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiD  800 (1351)
T KOG1035|consen  721 RDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKID  800 (1351)
T ss_pred             ccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhh
Confidence            4899999999999999999999986511             0000   00111112233499999998643    24677


Q ss_pred             ceEEEE
Q psy10556         61 SQSYRI   66 (69)
Q Consensus        61 ~w~~~i   66 (69)
                      +++-||
T Consensus       801 mYSLGI  806 (1351)
T KOG1035|consen  801 MYSLGI  806 (1351)
T ss_pred             hHHHHH
Confidence            776654

>KOG1345|consensus

Probab=98.28  E-value=8.6e-07  Score=46.77  Aligned_cols=62  Identities=18%  Similarity=0.180  Sum_probs=39.0

Q ss_pred             CCcccceeEEcCC--CeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG--YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~--~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~---~~~~~~w~~~i~   67 (69)
                      .|+|.+|||+...  .++|++|||..+.-...-.+...     ...|-+||.+..   +.   ....|+|.|||.
T Consensus       145 RdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~-----~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi  214 (378)
T KOG1345|consen  145 RDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEY-----VNNYHAPELCDTVVNEKLVVNPSTDIWQFGII  214 (378)
T ss_pred             cccccceEEEecCCccEEEeeecccccccCceehhhhh-----hcccCCcHHHhhccccceEecccccchheeee
Confidence            4899999999543  58899999999753322101010     012567766553   22   246899999985

>KOG0576|consensus

Probab=98.17  E-value=1.1e-06  Score=50.78  Aligned_cols=64  Identities=20%  Similarity=0.092  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC----CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i   66 (69)
                      .|+|..||+++..+.+|+.|||.+..+...-.....  ..+...|||||+..-+.    ....|+|+-||
T Consensus       136 RdiKGanilltd~gDvklaDfgvsaqitati~Krks--fiGtpywmapEvaaverkggynqlcdiwa~gi  203 (829)
T KOG0576|consen  136 RDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS--FIGTPYWMAPEVAAVERKGGYNQLCDIWALGI  203 (829)
T ss_pred             ccccccceeecccCceeecccCchhhhhhhhhhhhc--ccCCccccchhHHHHHhccccccccccccccc
Confidence            478999999999999999999998765432111111  12234599999876422    34789998776

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.04  E-value=4e-06  Score=45.55  Aligned_cols=54  Identities=9%  Similarity=-0.044  Sum_probs=35.2

Q ss_pred             CCc-ccceeEEcCCCeEEEcccCcccccccCcce------ecCCCcccceeEEeccccccC
Q psy10556          1 MAE-STKNCLVHAGYSIKISNFGVVRNLYAADYY------DLGGKSALPIRWMAWESIVKV   54 (69)
Q Consensus         1 ~dl-~~~nil~~~~~~~kl~~~~~~~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~   54 (69)
                      .|+ ||.|++++.++.++++|||+++.+......      ...........|++||.+...
T Consensus       135 rDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        135 NDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             CCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            488 899999998899999999999854322100      000011112347899988753

>KOG0668|consensus

Probab=98.01  E-value=1.3e-06  Score=45.24  Aligned_cols=62  Identities=11%  Similarity=0.178  Sum_probs=43.5

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEE-eccccccCC--CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWM-AWESIVKVP--SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-aPe~~~~~~--~~~~~~w~~~i   66 (69)
                      .|+||.|++++.. ..++++|+|++...-+..-+..    ++..||. .||.+..-.  ....|+||+|.
T Consensus       156 RDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV----RVASRyfKGPELLVdy~~YDYSLD~WS~Gc  221 (338)
T KOG0668|consen  156 RDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELLVDYQMYDYSLDMWSLGC  221 (338)
T ss_pred             ccCCcceeeechhhceeeeeecchHhhcCCCceeee----eeehhhcCCchheeechhccccHHHHHHHH
Confidence            4899999999865 6789999999974323222222    3334565 999998644  35789999874

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.01  E-value=7e-06  Score=47.50  Aligned_cols=63  Identities=11%  Similarity=0.013  Sum_probs=39.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~   65 (69)
                      .|||+.||+++.++.+++.|||+++...........  ......|++||.......  ...++|++|
T Consensus       128 rDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~~~~--~~~t~~~~~pe~~~~~~~~~~~s~~~s~g  192 (669)
T cd05610         128 RDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMD--ILTTPSMAKPKNDYSRTPGQVLSLISSLG  192 (669)
T ss_pred             CCccHHHEEEcCCCCEEEEeCCCCccccCCcccccc--cccCccccCccccccCCCCceeeeeeecC
Confidence            489999999999999999999999764332211111  111234778876554331  234455554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.98  E-value=8.8e-07  Score=44.00  Aligned_cols=65  Identities=15%  Similarity=0.039  Sum_probs=42.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccc-ccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI-VKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~-~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.|++++.+..+++.|||.+......... ..........|++||.. .... ...+|+|++|+.
T Consensus       123 di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~  189 (225)
T smart00221      123 DLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVI  189 (225)
T ss_pred             CCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHH
Confidence            78899999999999999999988765432100 00001112348999987 3322 347899987753

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.77  E-value=5.5e-06  Score=40.40  Aligned_cols=63  Identities=17%  Similarity=0.147  Sum_probs=42.7

Q ss_pred             CcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEE
Q psy10556          2 AESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRI   66 (69)
Q Consensus         2 dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i   66 (69)
                      |+++.|++++. ....++.+|+.+............  ......|++||..... . ....|+|++|+
T Consensus       117 dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~  182 (215)
T cd00180         117 DLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGTPAYMAPEVLLGKGYYSEKSDIWSLGV  182 (215)
T ss_pred             CCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc--ccCCCCccChhHhcccCCCCchhhhHHHHH
Confidence            78999999998 899999999988754332100000  1112348899988764 3 45788888764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.71  E-value=7.5e-06  Score=42.05  Aligned_cols=65  Identities=20%  Similarity=0.146  Sum_probs=43.0

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCccee----cCCCcccceeEEecccccc---CC-CCCCCceEEE
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYD----LGGKSALPIRWMAWESIVK---VP-SQDGPSQSYR   65 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~   65 (69)
                      .|+|+.|++++... .+++.|||.+..+.......    ..........|++||.+..   .. ....|+|+.|
T Consensus       125 rd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g  198 (384)
T COG0515         125 RDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG  198 (384)
T ss_pred             cCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHH
Confidence            47899999999988 79999999987543322110    0111122345899999886   23 4578888655

>KOG1033|consensus

Probab=97.57  E-value=1.9e-06  Score=48.19  Aligned_cols=66  Identities=15%  Similarity=0.132  Sum_probs=44.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCc----ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAAD----YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++.||....+..+|+.|||+........    ............+||+||-+.+.. ..++|+++-|++
T Consensus       381 dlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGli  451 (516)
T KOG1033|consen  381 DLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLI  451 (516)
T ss_pred             hccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHH
Confidence            688999999999999999999875433222    011111223345699999999766 457887766543

>KOG1023|consensus

Probab=97.54  E-value=9.7e-06  Score=45.49  Aligned_cols=65  Identities=23%  Similarity=0.342  Sum_probs=42.1

Q ss_pred             cccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--------CCCCCceEEEEe
Q psy10556          3 ESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--------SQDGPSQSYRIF   67 (69)
Q Consensus         3 l~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--------~~~~~~w~~~i~   67 (69)
                      ++..|++++..+.+|+.+||+.................-..-|.|||.+....        ....|+++|||.
T Consensus        75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii  147 (484)
T KOG1023|consen   75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGII  147 (484)
T ss_pred             eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHH
Confidence            57789999999999999999987543210000111111123499999998742        234788888764

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.36  E-value=1.9e-05  Score=45.77  Aligned_cols=61  Identities=8%  Similarity=-0.056  Sum_probs=32.9

Q ss_pred             eeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          7 NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         7 nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      |+++......+..+|+.+................++..|+|||.+.... ...+|+|++|+.
T Consensus       508 ~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~i  569 (669)
T cd05610         508 NLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVC  569 (669)
T ss_pred             ceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHH
Confidence            3444444444556666654322111100111112245699999998655 457999998863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.30  E-value=0.00023  Score=35.37  Aligned_cols=27  Identities=22%  Similarity=0.004  Sum_probs=23.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~   28 (69)
                      .|++|.|++++ ++.+++.|||++....
T Consensus       142 rDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         142 GDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CCCChhhEEEE-CCCEEEEEcccceecC
Confidence            48999999998 7889999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0590|consensus

Probab=97.25  E-value=0.00016  Score=41.83  Aligned_cols=67  Identities=15%  Similarity=0.046  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCC-eEEEcccCccccccc-CcceecCCCccc-ceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYA-ADYYDLGGKSAL-PIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.|.+++..+ ..+..+|+++..+.. ..........+. ...|+|||......  ....|+|+-|+.
T Consensus       148 ~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~  219 (601)
T KOG0590|consen  148 RDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV  219 (601)
T ss_pred             CCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence            47899999999998 899999999876554 221111111111 33499999988632  457888987753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.20  E-value=0.00028  Score=36.48  Aligned_cols=25  Identities=16%  Similarity=0.161  Sum_probs=21.8

Q ss_pred             CcccceeEEcCCCeEEEcccCccccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      |++|.|++++..+ +++.|||.....
T Consensus       160 Dikp~Nili~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        160 DPHKGNFIVSKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             CCChHHEEEeCCC-EEEEECCCcccc
Confidence            8999999999888 999999887654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.11  E-value=0.00068  Score=33.79  Aligned_cols=28  Identities=21%  Similarity=0.039  Sum_probs=24.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~   28 (69)
                      .|++|.|++++.++.+++.|||.+....
T Consensus       149 ~Dl~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         149 GDLSEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CCCCcccEEEcCCCcEEEEECCccccCC
Confidence            3899999999999999999999986544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.08  E-value=0.00034  Score=34.93  Aligned_cols=25  Identities=20%  Similarity=0.077  Sum_probs=21.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      .|+||.||+++ ++.+++.|||++..
T Consensus       142 rDlkP~NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147         142 ADLSEYNLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             CCCCHHHEEEE-CCcEEEEEcccccc
Confidence            38999999998 47899999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.98  E-value=0.00091  Score=34.33  Aligned_cols=27  Identities=19%  Similarity=0.080  Sum_probs=23.3

Q ss_pred             CCc-ccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAE-STKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl-~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|+ ++.||+++.++.++++|||++...
T Consensus       115 rDL~kp~NILv~~~g~i~LIDFG~A~~~  142 (218)
T PRK12274        115 NDLAKEANWLVQEDGSPAVIDFQLAVRG  142 (218)
T ss_pred             CCCCCcceEEEcCCCCEEEEECCCceec
Confidence            378 689999998899999999998743

>KOG0606|consensus

Probab=96.88  E-value=0.00013  Score=44.50  Aligned_cols=66  Identities=15%  Similarity=0.106  Sum_probs=42.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc---ce---------ecCC-CcccceeEEeccccccCCCC-CCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD---YY---------DLGG-KSALPIRWMAWESIVKVPSQ-DGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~---~~---------~~~~-~~~~~~~~~aPe~~~~~~~~-~~~~w~~~i   66 (69)
                      +|+|+.|.+++.-+.+|+.|||+++......   .+         .-.. ..+...-|.|||++.-..|. .+|.|+.|+
T Consensus       167 rdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGi  246 (1205)
T KOG0606|consen  167 RDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGI  246 (1205)
T ss_pred             CCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHH
Confidence            4899999999999999999999886432110   00         0000 11223348999998854443 577776554

>KOG0195|consensus

Probab=96.84  E-value=8.9e-05  Score=39.61  Aligned_cols=58  Identities=19%  Similarity=0.378  Sum_probs=31.8

Q ss_pred             cccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC----CCCCCceEEEEe
Q psy10556          3 ESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRIF   67 (69)
Q Consensus         3 l~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i~   67 (69)
                      +..+.++++.+.+.++. .+-.....+     .....+.| .||+||.++..+    -...|+|+|+|+
T Consensus       317 lns~hvmidedltaris-mad~kfsfq-----e~gr~y~p-awmspealqrkped~n~raadmwsfail  378 (448)
T KOG0195|consen  317 LNSKHVMIDEDLTARIS-MADTKFSFQ-----EVGRAYSP-AWMSPEALQRKPEDLNIRAADMWSFAIL  378 (448)
T ss_pred             cccceEEecchhhhhee-cccceeeee-----ccccccCc-ccCCHHHHhcCchhcchhhhhHHHHHHH
Confidence            34566777776665543 111111111     11112223 499999998543    246899999875

>KOG1290|consensus

Probab=96.71  E-value=0.00024  Score=40.34  Aligned_cols=49  Identities=14%  Similarity=0.061  Sum_probs=31.6

Q ss_pred             CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556         13 GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus        13 ~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      ...+|++|||-+-... ..+.....    +.-|-+||++.+.. .+..|+||++.
T Consensus       390 di~vKIaDlGNACW~~-khFT~DIQ----TRQYRapEVllGsgY~~~ADiWS~AC  439 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVH-KHFTEDIQ----TRQYRAPEVLLGSGYSTSADIWSTAC  439 (590)
T ss_pred             ceeEEEeeccchhhhh-hhhchhhh----hhhccCcceeecCCCCCchhHHHHHH
Confidence            4578999999774321 11111111    22388999999877 46899998864

>KOG0607|consensus

Probab=96.69  E-value=0.0014  Score=35.91  Aligned_cols=66  Identities=14%  Similarity=0.027  Sum_probs=38.0

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceec-----CCCcccceeEEecccccc---C-C-C-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDL-----GGKSALPIRWMAWESIVK---V-P-S-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~---~-~-~-~~~~~w~~~i   66 (69)
                      .|+||+|||-...   ..+|++||-++..+......+.     ...-.+.--|||||++.-   . . | .+-|.||.||
T Consensus       200 RDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGv  279 (463)
T KOG0607|consen  200 RDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGV  279 (463)
T ss_pred             ccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHH
Confidence            4899999999654   4569999876643221111110     001112234999998762   1 1 2 3678887765

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.63  E-value=0.0021  Score=33.29  Aligned_cols=27  Identities=11%  Similarity=0.020  Sum_probs=23.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|+++.||+++.++.++++||+.+...
T Consensus       166 rDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        166 ADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             CCCCchhEEEcCCCCEEEEECCCcccC
Confidence            389999999998889999999988653

>KOG1164|consensus

Probab=96.30  E-value=0.0035  Score=33.61  Aligned_cols=63  Identities=13%  Similarity=0.150  Sum_probs=37.3

Q ss_pred             CCcccceeEEcCC-----CeEEEcccCccc--ccccCcc---eec-C--CCcccceeEEeccccccCC-CCCCCceE
Q psy10556          1 MAESTKNCLVHAG-----YSIKISNFGVVR--NLYAADY---YDL-G--GKSALPIRWMAWESIVKVP-SQDGPSQS   63 (69)
Q Consensus         1 ~dl~~~nil~~~~-----~~~kl~~~~~~~--~~~~~~~---~~~-~--~~~~~~~~~~aPe~~~~~~-~~~~~~w~   63 (69)
                      .|+||.|++++..     ..+.+.|||+++  .......   ... .  ....+..+|.++.+-.... ....|.|+
T Consensus       146 RDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles  222 (322)
T KOG1164|consen  146 RDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLES  222 (322)
T ss_pred             CCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhh
Confidence            4899999999865     468899999998  3221110   001 1  1122446677776544333 34566665

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.23  E-value=0.0041  Score=30.54  Aligned_cols=26  Identities=19%  Similarity=0.058  Sum_probs=22.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|+++.|++++ ++.+++.|||.+...
T Consensus       139 ~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         139 GDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             CCCChhhEEEE-CCcEEEEECcccccc
Confidence            38999999999 889999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG4158|consensus

Probab=96.21  E-value=0.0033  Score=35.55  Aligned_cols=64  Identities=16%  Similarity=0.082  Sum_probs=36.0

Q ss_pred             CCcccceeEEcCC----CeEEEcccCcccccc----cCcceecCCCcccceeEEeccccccCC-------CCCCCceEE
Q psy10556          1 MAESTKNCLVHAG----YSIKISNFGVVRNLY----AADYYDLGGKSALPIRWMAWESIVKVP-------SQDGPSQSY   64 (69)
Q Consensus         1 ~dl~~~nil~~~~----~~~kl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~   64 (69)
                      .|+|..|||+..+    -.+.+.|||.+---.    .-.+.+......+.-..||||+.....       +.+.|.|+-
T Consensus       365 RDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~  443 (598)
T KOG4158|consen  365 RDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAA  443 (598)
T ss_pred             hcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhh
Confidence            4899999999533    356789999763100    001111111111123478999887422       457888843

>smart00090 RIO RIO-like kinase

Probab=96.05  E-value=0.0056  Score=31.70  Aligned_cols=26  Identities=27%  Similarity=0.161  Sum_probs=22.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|++|.||+++ .+.+++.|||.+...
T Consensus       173 ~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      173 GDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             CCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            48999999999 788999999988643

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=95.81  E-value=0.014  Score=27.12  Aligned_cols=25  Identities=20%  Similarity=0.190  Sum_probs=22.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.|++++..+.+++.||+.+..
T Consensus       114 Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         114 DLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CCCcceEEEECCcEEEEEecccccC
Confidence            7899999999888999999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.53  E-value=0.016  Score=32.72  Aligned_cols=28  Identities=25%  Similarity=0.236  Sum_probs=24.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~   28 (69)
                      .|++|.|+++..++.+++.|||+...+.
T Consensus       281 ~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       281 ADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            3889999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=95.22  E-value=0.023  Score=28.19  Aligned_cols=24  Identities=21%  Similarity=0.351  Sum_probs=21.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.|++++ .+.+++.|||.+..
T Consensus       115 Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       115 DLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCCcceEEEE-CCcEEEEECCCCcC
Confidence            7899999999 78899999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=95.13  E-value=0.024  Score=28.35  Aligned_cols=25  Identities=24%  Similarity=0.340  Sum_probs=21.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      .|+++.|++++ .+.+++.|||.+..
T Consensus       119 ~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        119 GDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCCCcccEEEE-CCCEEEEECCcccC
Confidence            37899999999 77889999998864

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=94.98  E-value=0.016  Score=33.30  Aligned_cols=26  Identities=19%  Similarity=0.238  Sum_probs=22.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|++|.|+++ .++.+++.|||+++..
T Consensus       452 rDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        452 GDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCCChHHEEE-ECCcEEEEeCcccccC
Confidence            3899999999 5778899999998753

>PRK10345 hypothetical protein; Provisional

Probab=94.78  E-value=0.025  Score=28.94  Aligned_cols=25  Identities=16%  Similarity=0.167  Sum_probs=19.0

Q ss_pred             CCcccceeEEcC----CCeEEEcc-cCccc
Q psy10556          1 MAESTKNCLVHA----GYSIKISN-FGVVR   25 (69)
Q Consensus         1 ~dl~~~nil~~~----~~~~kl~~-~~~~~   25 (69)
                      +|+||.||+++.    +..++++| +|...
T Consensus       129 rDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345        129 MELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             cCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            589999999974    34799999 45443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=94.67  E-value=0.044  Score=26.38  Aligned_cols=24  Identities=8%  Similarity=0.003  Sum_probs=20.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.|++++ .+.+++.||+.+..
T Consensus       113 D~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         113 DLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCCcCcEEEE-CCeEEEEecccccC
Confidence            7899999999 66789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1165|consensus

Probab=94.45  E-value=0.12  Score=28.91  Aligned_cols=52  Identities=15%  Similarity=0.165  Sum_probs=31.6

Q ss_pred             CCcccceeEEcCC-----CeEEEcccCcccccccCcce-----ecCCCcccceeEEeccccc
Q psy10556          1 MAESTKNCLVHAG-----YSIKISNFGVVRNLYAADYY-----DLGGKSALPIRWMAWESIV   52 (69)
Q Consensus         1 ~dl~~~nil~~~~-----~~~kl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~   52 (69)
                      .|+||.|.|+...     ..+.++|||++...-..+..     .......+.-|||+-..=.
T Consensus       148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHl  209 (449)
T KOG1165|consen  148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHL  209 (449)
T ss_pred             cccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccc
Confidence            4899999999754     35789999999754332211     1111122345788754433

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=93.87  E-value=0.054  Score=31.58  Aligned_cols=28  Identities=21%  Similarity=0.209  Sum_probs=24.0

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~   28 (69)
                      .|++|.|++++.++    .+++.|||+...+.
T Consensus       284 aDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        284 ADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             CCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            38899999999887    89999999987654

>KOG2137|consensus

Probab=93.42  E-value=0.19  Score=30.33  Aligned_cols=66  Identities=17%  Similarity=0.195  Sum_probs=41.6

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccC-cc----eec-CCCccc-ceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAA-DY----YDL-GGKSAL-PIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~-~~----~~~-~~~~~~-~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      ++.++++.++.++.-|+..|+.+...... ++    +.. ...... -.-|.|||++.... ....|+.+.|++
T Consensus       125 ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~l  198 (700)
T KOG2137|consen  125 NIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVL  198 (700)
T ss_pred             ccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeE
Confidence            46788899999999999988876543321 11    111 110011 13489999998744 457888877765

>KOG0601|consensus

Probab=92.62  E-value=0.097  Score=30.53  Aligned_cols=61  Identities=13%  Similarity=0.218  Sum_probs=37.5

Q ss_pred             CcccceeEEcCC-CeEEEcccCcccccccCcc---eecCCCcccceeEEeccccccCCCCCCCce
Q psy10556          2 AESTKNCLVHAG-YSIKISNFGVVRNLYAADY---YDLGGKSALPIRWMAWESIVKVPSQDGPSQ   62 (69)
Q Consensus         2 dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w   62 (69)
                      |+++.|+....+ ..+++.+|++...+.....   .........-.+|++||....-.....|+.
T Consensus       247 ~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~  311 (524)
T KOG0601|consen  247 DLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF  311 (524)
T ss_pred             ccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc
Confidence            678899999988 8889999998776553321   110000011134999998875433344443

>KOG1240|consensus

Probab=88.00  E-value=0.39  Score=31.05  Aligned_cols=50  Identities=14%  Similarity=0.222  Sum_probs=31.6

Q ss_pred             CcccceeEEcCCCeEEEcccCccccc-ccCc------ceecCCCcccceeEEecccccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNL-YAAD------YYDLGGKSALPIRWMAWESIVK   53 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~aPe~~~~   53 (69)
                      |+|.+|||++.=..+.+.||.--..- .+.+      +.-.....+  .-|.|||.+..
T Consensus       145 DIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRR--tCYiAPERFv~  201 (1431)
T KOG1240|consen  145 DIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRR--TCYIAPERFVS  201 (1431)
T ss_pred             ccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCce--eeecChHhhhc
Confidence            79999999999888889999654332 1111      010111111  23899999886

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=87.83  E-value=0.58  Score=25.43  Aligned_cols=47  Identities=15%  Similarity=0.164  Sum_probs=24.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK   53 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~   53 (69)
                      |+++.|++++.+|.+.+.+|+.......  ....   ...+..+.+||....
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~--~~~~---~~~~~~~~PPe~~~~  216 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGT--RYRC---SEFPVAFTPPELESC  216 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTE--EEEG---GGS-TTTS-HHHHHH
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCc--eeec---cCCCcccCChhhhhh
Confidence            7899999999999999999976543221  1111   111233667776654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=87.01  E-value=0.91  Score=23.48  Aligned_cols=24  Identities=25%  Similarity=0.364  Sum_probs=19.5

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+.+.|+++.... +-++|||++..
T Consensus       117 DLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         117 DLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CCccceEEEeCCc-EEEEECCcccc
Confidence            6788899998776 66899999864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=86.29  E-value=0.59  Score=23.93  Aligned_cols=24  Identities=17%  Similarity=0.021  Sum_probs=19.3

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.||++. ++.+.++||+.+-.
T Consensus       150 DLs~~NIL~~-~~~v~iIDF~qav~  173 (197)
T cd05146         150 DLSEYNMLWH-DGKVWFIDVSQSVE  173 (197)
T ss_pred             CCCHHHEEEE-CCcEEEEECCCcee
Confidence            7899999997 45688999987644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1163|consensus

Probab=86.15  E-value=0.71  Score=25.04  Aligned_cols=29  Identities=17%  Similarity=0.320  Sum_probs=22.3

Q ss_pred             CCcccceeEEcCCC---eEEEcccCccccccc
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYA   29 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~   29 (69)
                      .|+||.|.|..-..   .+-++|||++..+..
T Consensus       135 RDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen  135 RDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             ccCCccceeeccccccceEEEEeccchhhhcc
Confidence            48999999997654   456899999976543

>KOG1167|consensus

Probab=85.94  E-value=0.27  Score=27.96  Aligned_cols=25  Identities=16%  Similarity=0.189  Sum_probs=19.0

Q ss_pred             CCcccceeEEcCC-CeEEEcccCccc
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVR   25 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~   25 (69)
                      .|+|+.|.+.+.. +.-.+.|||+++
T Consensus       156 RDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  156 RDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             cCCCccccccccccCCceEEechhHH
Confidence            4889999998754 455678999876

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=84.86  E-value=1.2  Score=22.66  Aligned_cols=25  Identities=16%  Similarity=0.153  Sum_probs=21.0

Q ss_pred             CcccceeEEcCCC---eEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGY---SIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~---~~kl~~~~~~~~   26 (69)
                      |+.+.||++....   .+.++||..++.
T Consensus       143 Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  143 DLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CCCcccEEEeCCCCceeEEEEcchhcee
Confidence            7899999998887   788899987754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=84.85  E-value=1.3  Score=22.15  Aligned_cols=25  Identities=12%  Similarity=0.157  Sum_probs=20.3

Q ss_pred             CcccceeEEcC--CCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHA--GYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~--~~~~kl~~~~~~~~   26 (69)
                      |+.+.|++++.  .+.+.+.||..+..
T Consensus       180 D~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         180 DYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             CCCcccEEEcCCCCcEEEEEecccccc
Confidence            78899999988  56678899987754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=84.03  E-value=1.4  Score=22.39  Aligned_cols=25  Identities=32%  Similarity=0.395  Sum_probs=17.7

Q ss_pred             CcccceeEEcCCCeEEEcccCccccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      |+...||++..+ .+.++||+.+...
T Consensus       132 DLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  132 DLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             S-STTSEEEETT-CEEE--GTTEEET
T ss_pred             CCChhhEEeecc-eEEEEecCcceec
Confidence            788899999877 7889999877543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK10271 thiK thiamine kinase; Provisional

Probab=81.85  E-value=2.4  Score=21.70  Aligned_cols=25  Identities=12%  Similarity=0.186  Sum_probs=20.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      +|+-+.|++++.++ ++++|++-+..
T Consensus        82 ~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         82 MDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             CCCCCccEEEECCC-EEEEeCCcccC
Confidence            47889999998777 77999987653

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=80.88  E-value=2.3  Score=21.31  Aligned_cols=25  Identities=24%  Similarity=0.126  Sum_probs=16.5

Q ss_pred             CcccceeEEc-CCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVH-AGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~-~~~~~kl~~~~~~~~   26 (69)
                      |+.+.|++++ .++.+.+.||..+..
T Consensus       172 D~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  172 DLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             S-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             ccccccceeeeccceeEEEecccceE
Confidence            7789999999 556668999987654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=80.61  E-value=2  Score=21.78  Aligned_cols=24  Identities=17%  Similarity=0.243  Sum_probs=16.8

Q ss_pred             CcccceeEE-cCCCeEEEcccCccc
Q psy10556          2 AESTKNCLV-HAGYSIKISNFGVVR   25 (69)
Q Consensus         2 dl~~~nil~-~~~~~~kl~~~~~~~   25 (69)
                      |+.+.||++ ..++.++++||--+.
T Consensus       149 Dl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  149 DLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             --SGGGEEETSSSSCEEE--GTT-E
T ss_pred             cCccccEEeccCCCeEEEecHHHHh
Confidence            788999999 788999999997764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	69
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-12
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-12
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-12
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-11
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-10
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-10
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-10
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-10
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-10
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-10
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-10
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-10
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-10
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-10
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-10
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-10
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		5e-10
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		6e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-09
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-07
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-07
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-07
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-07
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-07
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-07
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-07
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-07
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-07
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-07
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-07
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-07
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-07
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-07
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		5e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		5e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-06
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		6e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		6e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		6e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-06
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		7e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		8e-06
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-06
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-05
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		6e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		8e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		9e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		9e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		9e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		9e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		9e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		3e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		4e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		5e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		5e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		5e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		5e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		5e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		5e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		5e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		6e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		6e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		6e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		6e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		6e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		7e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		8e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		8e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		8e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		8e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		8e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		8e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		8e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		8e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-04

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 162 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 210

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 156 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 204

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI+
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL 233

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV A   +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI+
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +T+NCLV     +KI++FG+ RN+Y+ADYY   G  A+PIRWM  ESI
Sbjct: 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI 248

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 156 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 203

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+NCLV     +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI+
Sbjct: 155 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 203

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWMA ES+
Sbjct: 158 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 205

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 156 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 210
Query: 64  Y 64
           Y
Sbjct: 211 Y 211

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 152 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 206
Query: 64  Y 64
           Y
Sbjct: 207 Y 207

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 219
Query: 64  Y 64
           Y
Sbjct: 220 Y 220

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 212
Query: 64  Y 64
           Y
Sbjct: 213 Y 213

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 212
Query: 64  Y 64
           Y
Sbjct: 213 Y 213

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 213
Query: 64  Y 64
           Y
Sbjct: 214 Y 214

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 155 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 209
Query: 64  Y 64
           Y
Sbjct: 210 Y 210

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 219
Query: 64  Y 64
           Y
Sbjct: 220 Y 220

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 241
Query: 64  Y 64
           Y
Sbjct: 242 Y 242

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+N LV+   ++KIS+ G+ R +YAADYY L G S LPIRWMA E+I+
Sbjct: 172 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 220

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           +T+N LV+   ++KIS+ G+ R +YAADYY L G S LPIRWMA E+I+
Sbjct: 155 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+     +DG   +
Sbjct: 152 AARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL-----KDGVFTT 206
Query: 64  Y 64
           Y
Sbjct: 207 Y 207

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++Y   YY  GGK  LP+RWMA ES+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESL 204

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++   D    GGK  LP+RWMA ES+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++   D    GGK  LP+RWMA ES+
Sbjct: 154 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 201

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC+V   +++KI +FG+ R++   D    GGK  LP+RWMA ES+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++   D    GGK  LP+RWM+ ES+     +DG   +
Sbjct: 150 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL-----KDGVFTT 204
Query: 64  Y 64
           Y
Sbjct: 205 Y 205

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQS 63
           + +NC+V   +++KI +FG+ R++   D    GGK  LP+RWM+ ES+     +DG   +
Sbjct: 159 AARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL-----KDGVFTT 213
Query: 64  Y 64
           Y
Sbjct: 214 Y 214

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 179 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 155 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 178 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 152 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC++    ++ +++FG+ R +Y+ DYY  G  S LP++W+A ES+
Sbjct: 164 AARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 219

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 184 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 236

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 219

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 159 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 211

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 194 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 246

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 220

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 220

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 234

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 234

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 174 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 226

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 182 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME 234

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 185 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME 237

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 33/48 (68%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +NC++    ++ +++FG+ + +Y+ DYY  G  + +P++W+A ES+
Sbjct: 174 AARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ ++
Sbjct: 208 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 219 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV  G  +KIS+FG+ R++Y  D Y    +  +P++WMA ES+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 165 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  ++  +  K+   LP++WMA ES+
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4   STKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +NCL+     G   KI +FG+ +++Y A YY  GG + LP++WM  E+ ++
Sbjct: 168 AARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFME 220

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++Y  +   +  K+   LP++WMA ES+
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +N LV  G  +KI +FG+ R++ +   Y + G + LP++WMA ES+ +
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE 248

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 209

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV  G  +KIS+FG+ R++Y  D      +  +P++WMA ES+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 216

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 213

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV  G  +KIS+FG+ R++Y  D      +  +P++WMA ES+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 217

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++   ++  +  K+   LP++WMA ES+
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 185 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 232

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 179 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 226

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 240

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGG--KSALPIRWMAWESI 51
           + +NC++   +++K+++FG+ R++   +YY +     + LP++W A ES+
Sbjct: 151 AARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 187 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 234

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 191 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 218

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 223

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 277

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 220

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV-KVPSQDGPSQ 62
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA ESI  K+ S      
Sbjct: 226 AARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVW 285
Query: 63  SYRIF 67
           SY + 
Sbjct: 286 SYGVL 290

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV A   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 518 AARNVLVSATDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 564

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEAL 231

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV A   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 138 AARNVLVSATDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 184

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVR--NLYAADYYDLGGKSALPIRWMAWESIVK 53
           + +N LV +   +KI++FG+ R  ++   +Y+  GGK  +PI+WMA ESI++
Sbjct: 146 AARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK--VPIKWMALESILR 195

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 564

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV     ++I++FG+ R++   DYY       LP++WMA E++
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 188 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 235

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 195 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 242

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 150 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 198

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 190 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 237

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 199

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 148 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 196

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 199

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 145 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 193

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 151 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 199

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 195

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 145 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 193

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 195

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 146 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 194

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAAD--YYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A +  Y+  GGK  +PI+WMA ESI+
Sbjct: 146 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 194

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 171 AARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 218

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 195 AARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI 242

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 225 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 272

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 259

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 227 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 274

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 218 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 265

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 224

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 220 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 171 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 218

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 166 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 212

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 141 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 187

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 181

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 140 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 186

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 184

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 184

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 178 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 226

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 143 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 189

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 192

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 154 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 202

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 141 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 189

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 192

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 192

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 195

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 147 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 195

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 138 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 186

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 192

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 144 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 192

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 38.5 bits (88), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 4   STKNCLVHAGYSIKISNFGVVRNLYA--ADYYDLGGKSALPIRWMAWESIV 52
           + +N LV     +KI++FG+ + L A   +Y+  GGK  +PI+WMA ESI+
Sbjct: 169 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK--VPIKWMALESIL 217

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	69
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-19
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-19
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-19
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-18
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-16
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-16
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-15
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-15
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-15
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-15
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-15
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-14
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-06

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 77.3 bits (191), Expect = 3e-19
 Identities = 26/47 (55%), Positives = 36/47 (76%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           T+NCLV  G  +KI +FG+ R++Y+ DYY +GG++ LPIRWM  ESI
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 232

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 76.9 bits (190), Expect = 4e-19
 Identities = 26/47 (55%), Positives = 35/47 (74%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           T+NCLV A   +KI +FG+ R++Y+ DYY +GG + LPIRWM  ESI
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 207

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 77.4 bits (191), Expect = 4e-19
 Identities = 26/47 (55%), Positives = 34/47 (72%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           T+NCLV     +KI++FG+ RN+Y+ADYY   G  A+PIRWM  ESI
Sbjct: 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI 248

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 76.5 bits (189), Expect = 5e-19
 Identities = 27/47 (57%), Positives = 35/47 (74%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           T+N LV+   ++KIS+ G+ R +YAADYY L G S LPIRWMA E+I
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 73.9 bits (182), Expect = 7e-18
 Identities = 22/45 (48%), Positives = 33/45 (73%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 69.3 bits (170), Expect = 4e-16
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 277

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 68.4 bits (168), Expect = 7e-16
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV  G  +KIS+FG+ R++Y  D Y    +  +P++WMA ES+
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 68.1 bits (167), Expect = 7e-16
 Identities = 14/45 (31%), Positives = 31/45 (68%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NC++    ++ +++FG+ + +Y+ DYY  G  + +P++W+A ES+
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 68.1 bits (167), Expect = 9e-16
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 7   NCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ +
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 68.2 bits (167), Expect = 9e-16
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 7   NCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV 52
           NCL+     G   KI +FG+ R++Y A YY  GG + LP++WM  E+ +
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 259

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 67.7 bits (166), Expect = 1e-15
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI++FG+ R++   DYY       LP++WMA E++
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 67.4 bits (165), Expect = 2e-15
 Identities = 17/45 (37%), Positives = 31/45 (68%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NC++    ++ +++FG+ R +Y+ DYY  G  S LP++W+A ES+
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 66.9 bits (164), Expect = 2e-15
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 66.9 bits (164), Expect = 2e-15
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N L+  G   KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 66.6 bits (163), Expect = 3e-15
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI++FG+ R+++  DYY       LP++WMA E++
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 65.8 bits (161), Expect = 6e-15
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N L+  G+  KI +FG+ R++     Y + G + LP++WMA ESI
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 238

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 65.8 bits (161), Expect = 8e-15
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV  G  +KI +FG+ R++ +   Y + G + LP++WMA ES+
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 246

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 63.8 bits (156), Expect = 3e-14
 Identities = 17/47 (36%), Positives = 34/47 (72%), Gaps = 2/47 (4%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSA--LPIRWMAWESI 51
           NC++   +++K+++FG+ R++Y  +YY +  K+   LP++WMA ES+
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 61.9 bits (150), Expect = 2e-13
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 60.0 bits (146), Expect = 6e-13
 Identities = 14/47 (29%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDL--GGKSALPIRWMAWESI 51
           NC++   +++K+++FG+ R++   +YY +     + LP++W A ES+
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESI 51
           N L+     +KI +FG+ + +    +YY +      P+ W A E +
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 209

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 59.0 bits (143), Expect = 2e-12
 Identities = 14/47 (29%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADY--YDLGGKSALPIRWMAWESI 51
           NC++   +++K+++FG+ R++Y  ++        + LP++WMA ES+
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 58.4 bits (142), Expect = 3e-12
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV   Y  KI++FG+ R     + Y       LP+RWMA ES+
Sbjct: 172 NILVGENYVAKIADFGLSRG---QEVYVKKTMGRLPVRWMAIESL 213

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 58.0 bits (141), Expect = 4e-12
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV     +KIS+FG+ R      Y   GG   +P++W A E++
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 56.6 bits (137), Expect = 1e-11
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNL-YAADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI +FG+ + L    +YY +      PI W A ES+
Sbjct: 175 NILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 220

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 56.2 bits (136), Expect = 1e-11
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESI 51
           N LV + + +KI +FG+ + +    +YY +      P+ W A E +
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL 201

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 56.1 bits (136), Expect = 2e-11
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 11/61 (18%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRI 66
           N LV     +KI++FG+ + L A +         +PI+WMA ESI            +RI
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI-----------LHRI 195

Query: 67  F 67
           +
Sbjct: 196 Y 196

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 56.2 bits (136), Expect = 2e-11
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N L+ +   +++++FGV   L   D   L  ++  PI+WMA ESI
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 55.0 bits (133), Expect = 4e-11
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI +FG+ + L    +++ +      PI W A ES+
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 55.0 bits (133), Expect = 5e-11
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV     +KI++FG+ + L A +         +PI+WMA ESI
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 54.9 bits (132), Expect = 5e-11
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 521 NVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 564

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 54.5 bits (132), Expect = 7e-11
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV +   +K+ +FG+ R +  + YY    K  LPI+WMA ESI
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESI 189

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.1 bits (131), Expect = 9e-11
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESI 51
           N LV +   +K+ +FG+ R +   DYY     +  LPI+WM+ ESI
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTR--LPIKWMSPESI 186

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNL-YAADYYDLGGKSALPIRWMAWESI 51
           N LV +   +KI++FG+ + L    DYY +      PI W A ES+
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 53.0 bits (128), Expect = 2e-10
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV   + +K+++FG+ R L   D Y     +  PI+W A ES+
Sbjct: 141 NCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 184

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 52.2 bits (126), Expect = 5e-10
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV      K+S+FG+ +   +       GK  LP++W A E++
Sbjct: 147 NVLVSEDNVAKVSDFGLTKEASSTQD---TGK--LPVKWTAPEAL 186

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 51.8 bits (125), Expect = 6e-10
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESI 51
           N LV    S KI++FG+ R +   +Y    G K   PI+W A E+I
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTAREGAK--FPIKWTAPEAI 182

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 51.8 bits (125), Expect = 6e-10
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESI 51
           NCLV+    +K+S+FG+ R +   +Y   +G K   P+RW   E +
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK--FPVRWSPPEVL 193

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 51.8 bits (125), Expect = 6e-10
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESI 51
           NCLV     +K+S+FG+ R +    Y   +G K   P++W A E  
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK--FPVKWSAPEVF 177

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 51.0 bits (123), Expect = 9e-10
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESI 51
           NCLV     IK+S+FG+ R +    Y    G K   P++W + E  
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK--FPVKWASPEVF 177

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 51.2 bits (123), Expect = 1e-09
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV      K+S+FG+ +   +       GK  LP++W A E++
Sbjct: 319 NVLVSEDNVAKVSDFGLTKEASSTQD---TGK--LPVKWTAPEAL 358

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 51.1 bits (123), Expect = 1e-09
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAA-DYYDLGGKSALPIRWMAWESI 51
           N L+     +KI +FG++R L    D+Y +     +P  W A ES+
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESI 51
           N L+   +  KIS+FG+ + L A  +YY        P++W A E I
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 50.7 bits (122), Expect = 1e-09
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESI 51
           N L+   +  KIS+FG+ + L A D YY        P++W A E I
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 49.9 bits (119), Expect = 3e-09
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESI 51
           N L+   +  KIS+FG+ + L A D YY        P++W A E I
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 49.6 bits (119), Expect = 4e-09
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 7   NCLVHAGYSIKISNFGVVRNL---YAADYYDLGGKSALPIRWMAWESI 51
           N LV++    K+S+FG+ R L     A Y   GGK  +PIRW A E+I
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK--IPIRWTAPEAI 222

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 48.7 bits (116), Expect = 8e-09
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV      K+++FG+ R +   +Y    G    PI+W A E+ 
Sbjct: 393 NILVGENLVCKVADFGLARLIEDNEYTARQGAK-FPIKWTAPEAA 436

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 48.6 bits (116), Expect = 9e-09
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV      K+++FG+ R +   +Y    G    PI+W A E+ 
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTARQGAK-FPIKWTAPEAA 353

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESI 51
           N LV A    KI++FG+ R +   +Y    G K   PI+W A E+I
Sbjct: 314 NILVSASLVCKIADFGLARVIEDNEYTAREGAK--FPIKWTAPEAI 357

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA-ADYYDLGGKSALPIRWMAWESI 51
           N LV +    K+S+FG+ R L    D         +PIRW A E+I
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYA---ADYYDLGGKSALPIRWMAWESI 51
           N L+++    K+S+FG+ R L     A Y   GGK  +PIRW + E+I
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK--IPIRWTSPEAI 222

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 47.8 bits (114), Expect = 1e-08
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           NCLV   + +K+++FG+ R L   D Y     +  PI+W A ES+
Sbjct: 348 NCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 391

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 14/55 (25%)

Query: 5   TKNCLVHAGYS--------IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
            KN L+             IK+S+ G+   +   D           I W+  E I
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------QERIPWVPPECI 189

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + N  +H   ++KI +FG+              + +  I WMA E I
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	69
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.77
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.76
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.74
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.74
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.7
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.67
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.66
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.65
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.65
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.64
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.62
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.6
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.59
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.59
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.51
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.5
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.42
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.41
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.41
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.4
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.37
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.37
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.35
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.35
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.35
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.35
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.34
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.33
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.33
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.32
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.31
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.31
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.31
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.3
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.29
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.29
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.29
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.29
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.29
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.29
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.28
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.28
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.28
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.28
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.27
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.27
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.27
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.27
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.27
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.27
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.27
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.27
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.26
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.26
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.26
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.25
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.25
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.25
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.25
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.25
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.24
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.24
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.24
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.24
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.24
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.24
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.24
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.24
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.24
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.24
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.24
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.23
3niz_A	311	Rhodanese family protein; structural genomics, str	99.23
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.23
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.23
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.23
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.22
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.22
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.22
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.22
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.22
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.21
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.21
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.21
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.21
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.21
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.2
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.2
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.19
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.19
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.19
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.18
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.18
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.18
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.18
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.18
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.17
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.17
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.17
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.17
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.17
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.16
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.16
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.16
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.16
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.15
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.15
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.15
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.14
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.14
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.14
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.14
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.14
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.13
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.13
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.13
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.12
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.12
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.12
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.1
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.1
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.1
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.1
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.1
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.1
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.1
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.1
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.09
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.09
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.08
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.07
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.05
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.03
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.03
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.03
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.03
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.03
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.03
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.02
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.02
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.02
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.02
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.02
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.02
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.02
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.01
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.01
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.01
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.01
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.99
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.99
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.99
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.98
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.98
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.98
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.95
3bhy_A	283	Death-associated protein kinase 3; death associate	98.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.92
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.92
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.91
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.91
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.9
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.89
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.89
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.89
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.88
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.87
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.85
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.82
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.81
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.79
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.78
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.78
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.73
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.66
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.08
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.64
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.01
3uqc_A	286	Probable conserved transmembrane protein; structur	94.41
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	93.2
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	88.89
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	86.84
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	83.46
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	82.43
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	80.51

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.77  E-value=2.2e-21  Score=100.32  Aligned_cols=67  Identities=46%  Similarity=0.683  Sum_probs=52.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|++|||++.++.+|++|||+++...............++++|||||++..+. ..++|+|||||.
T Consensus       169 RDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvv  236 (308)
T 4gt4_A          169 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV  236 (308)
T ss_dssp             SCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHH
Confidence            5899999999999999999999998654433222233334567899999998777 458999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.76  E-value=2.2e-21  Score=101.81  Aligned_cols=67  Identities=27%  Similarity=0.490  Sum_probs=52.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|||++|||++.++.+|++|||+++...............+|.+|||||++....+ .++|+|||||.
T Consensus       209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~  276 (353)
T 4ase_A          209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  276 (353)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHH
Confidence            58999999999999999999999986544332222223345678999999987764 58999999974

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.74  E-value=1.7e-20  Score=97.74  Aligned_cols=67  Identities=40%  Similarity=0.814  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|++|||++.++.+|++|||+++...............++.+|||||++.... ..++|+|||||.
T Consensus       182 RDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvv  249 (329)
T 4aoj_A          182 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV  249 (329)
T ss_dssp             SCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHH
Confidence            5899999999999999999999998654333222222234466799999998776 458999999874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.74  E-value=6e-21  Score=98.40  Aligned_cols=67  Identities=39%  Similarity=0.737  Sum_probs=52.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|++|||++.++.+|++|||+++...............++.+|||||++.... ..++|+|||||.
T Consensus       152 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvv  219 (299)
T 4asz_A          152 RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV  219 (299)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHH
Confidence            5899999999999999999999998654443333333334567899999998776 458999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.70  E-value=1.4e-19  Score=93.70  Aligned_cols=67  Identities=25%  Similarity=0.309  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC---C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV---P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|||++.++.+|++|||+++...............++..|||||++...   . ..++|+|||||.
T Consensus       156 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvv  226 (307)
T 3omv_A          156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIV  226 (307)
T ss_dssp             SCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHH
T ss_pred             CccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHH
Confidence            599999999999999999999999754322211111122335569999998642   2 347999999874

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.67  E-value=1.6e-18  Score=90.91  Aligned_cols=65  Identities=20%  Similarity=0.196  Sum_probs=48.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|++|||++.++.+|++|||++..+......  .....++..|||||++.... ..++|+||+||.
T Consensus       194 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvi  259 (346)
T 4fih_A          194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIM  259 (346)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCCHHHEEECCCCCEEEecCcCceecCCCCCc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHH
Confidence            599999999999999999999999765433211  11112345699999998766 458999998864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.66  E-value=1.2e-18  Score=90.33  Aligned_cols=67  Identities=12%  Similarity=0.145  Sum_probs=48.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      +|+|++|||++.++.+|++|||+++.+............+++..|||||++.+..+ ..+|+||.||.
T Consensus       156 RDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvi  223 (311)
T 4aw0_A          156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI  223 (311)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHH
T ss_pred             CCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHH
Confidence            59999999999999999999999986543221111112233456999999987664 47999998763

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.65  E-value=9.7e-18  Score=86.27  Aligned_cols=63  Identities=14%  Similarity=0.023  Sum_probs=46.3

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      +|+||.|||++. ++.+|++|||+++........ ..   .++..|||||++.+....++|+||+|+.
T Consensus       155 RDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~-~~---~GTp~YmAPE~~~~~y~~~~DiwSlGvi  218 (290)
T 3fpq_A          155 RDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK-AV---IGTPEFMAPEMYEEKYDESVDVYAFGMC  218 (290)
T ss_dssp             CCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE-ES---CSSCCCCCGGGGGTCCCTHHHHHHHHHH
T ss_pred             cccChhheeEECCCCCEEEEeCcCCEeCCCCccC-Cc---ccCccccCHHHcCCCCCcHHHHHHHHHH
Confidence            599999999975 789999999999753322211 11   2234699999987544568999999863

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.65  E-value=1e-18  Score=90.17  Aligned_cols=67  Identities=16%  Similarity=0.071  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-c-CCCcccceeEEeccccccCC-------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-L-GGKSALPIRWMAWESIVKVP-------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i~   67 (69)
                      +|+|+.|||++.++.+|++|||+++......... . .....++..|||||++.+..       ..++|+|||||.
T Consensus       132 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv  207 (303)
T 3hmm_A          132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  207 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence            5899999999999999999999997644332111 1 11223456799999997542       236899999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.65  E-value=2.1e-18  Score=89.20  Aligned_cols=65  Identities=17%  Similarity=0.200  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||+|||++.++.+|++|||+++.......  ......++..|||||++.... ...+|+||+|+.
T Consensus       150 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi  215 (304)
T 3ubd_A          150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL  215 (304)
T ss_dssp             SSCCGGGEEECTTSCEEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred             CCCCHHHeEEcCCCCEEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHH
Confidence            59999999999999999999999975433221  111122345699999998766 458999998864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.64  E-value=4.9e-18  Score=90.90  Aligned_cols=65  Identities=20%  Similarity=0.194  Sum_probs=48.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|||+.|||++.++.+|++|||++..+.....  ......++..|||||++.... ..++|+||+||.
T Consensus       271 RDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvi  336 (423)
T 4fie_A          271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIM  336 (423)
T ss_dssp             CCCSTTTEEECTTCCEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCCHHHEEEcCCCCEEEecCccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHH
Confidence            59999999999999999999999976543321  111122344599999998766 458999998864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.62  E-value=6.1e-18  Score=87.24  Aligned_cols=67  Identities=15%  Similarity=0.089  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee----------cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD----------LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||+++.+.......          ......++..|||||++.+.. ..++|+||+|+.
T Consensus       142 RDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi  219 (299)
T 4g31_A          142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLI  219 (299)
T ss_dssp             CCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             ccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHH
Confidence            5999999999999999999999997654321100          011112345699999998766 458999998863

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.60  E-value=1.8e-17  Score=86.69  Aligned_cols=67  Identities=16%  Similarity=0.057  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCccee---cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYD---LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.|||++.++ .+|++|||+++.+.......   ......++..|||||++.+.. ..++|+||+|+.
T Consensus       174 RDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi  245 (336)
T 4g3f_A          174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM  245 (336)
T ss_dssp             SCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             cccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHH
Confidence            59999999999887 69999999997654321110   111112345699999998766 458999998863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.59  E-value=2e-17  Score=84.62  Aligned_cols=64  Identities=17%  Similarity=0.182  Sum_probs=42.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      +|+||+||+++.++.+|++|||+++.........   ...++..|||||++.+..+  .++|+||.|+.
T Consensus       136 RDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~---~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvi  201 (275)
T 3hyh_A          136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK---TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVI  201 (275)
T ss_dssp             CCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHH
T ss_pred             ccCChHHeEECCCCCEEEeecCCCeecCCCCccC---CeeECcccCChhhhcCCCCCCChhhhHHHHHH
Confidence            5999999999999999999999997543322111   1123455999999987653  36899998863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.59  E-value=2.1e-18  Score=90.55  Aligned_cols=65  Identities=11%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      +|+|++|||++.++.+|++|||+++..........  ...++..|||||++.+..+ .++|+||+|+.
T Consensus       149 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~--~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvi  214 (350)
T 4b9d_A          149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR--ACIGTPYYLSPEICENKPYNNKSDIWALGCV  214 (350)
T ss_dssp             TTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH--HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccCCHHHEEECCCCCEEEcccccceeecCCccccc--ccCCCccccCHHHHCCCCCCcHHHHHHHHHH
Confidence            59999999999999999999999986543211100  1122345999999987664 48999998863

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.51  E-value=3.1e-16  Score=87.77  Aligned_cols=63  Identities=17%  Similarity=0.101  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      +||||+|||++.++.+|++|||++..+......    ..+++..|||||++..+ . ...+|+||.||.
T Consensus       316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~----t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvi  380 (689)
T 3v5w_A          316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM  380 (689)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECSSCCCC----SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH
T ss_pred             cCCchHHeEEeCCCCEEecccceeeecCCCCCC----CccCCcCccCHHHHhCCCCCCcHHHHHHHHHH
Confidence            599999999999999999999999765433221    11234569999999754 3 457899998864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.50  E-value=5.8e-16  Score=82.44  Aligned_cols=67  Identities=19%  Similarity=0.143  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce--ecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY--DLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||+++.+......  .......++..|+|||++.+..  ...+|+||.|+.
T Consensus       182 RDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~i  252 (398)
T 4b99_A          182 RDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI  252 (398)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             CCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHH
Confidence            599999999999999999999999865432111  1111223345699999987644  346899998863

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.42  E-value=4.6e-15  Score=78.18  Aligned_cols=66  Identities=15%  Similarity=0.065  Sum_probs=44.3

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcce--------------------------ecCCCcccceeEEecccccc
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYY--------------------------DLGGKSALPIRWMAWESIVK   53 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~aPe~~~~   53 (69)
                      +|+||+|||++.+ +.+|++|||+++........                          .......++..|+|||++..
T Consensus       141 RDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~  220 (361)
T 4f9c_A          141 RDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK  220 (361)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT
T ss_pred             CcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence            5999999999877 79999999998643221100                          00001123455999999976


Q ss_pred             CC-C-CCCCceEEEE
Q psy10556         54 VP-S-QDGPSQSYRI   66 (69)
Q Consensus        54 ~~-~-~~~~~w~~~i   66 (69)
                      .. + ..+|+||.|+
T Consensus       221 ~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          221 CPNQTTAIDMWSAGV  235 (361)
T ss_dssp             CSCCCTHHHHHHHHH
T ss_pred             CCCCCCccchhhhHH
Confidence            54 3 4679998876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.41  E-value=3.4e-15  Score=78.54  Aligned_cols=67  Identities=27%  Similarity=0.547  Sum_probs=48.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++................+..|+|||.+.... ..++|+|++|+.
T Consensus       227 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i  294 (370)
T 2psq_A          227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL  294 (370)
T ss_dssp             SCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             cccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999997554332212222223345699999998665 447999998864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.41  E-value=4.8e-15  Score=77.61  Aligned_cols=67  Identities=6%  Similarity=-0.052  Sum_probs=47.4

Q ss_pred             CCcccceeEEcC-----------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-----------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-----------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.           .+.+|++|||++..+..............+..|+|||++.+.. ..++|+|++|+.
T Consensus       196 rDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  274 (365)
T 3e7e_A          196 GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAAT  274 (365)
T ss_dssp             CCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHH
T ss_pred             CCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHH
Confidence            589999999988           8999999999996533111001111122345699999998766 568999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.40  E-value=2.2e-15  Score=79.38  Aligned_cols=67  Identities=30%  Similarity=0.486  Sum_probs=48.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|++|||+++................|..|+|||.+.... ..++|+|++|+.
T Consensus       237 rDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i  304 (377)
T 3cbl_A          237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGIL  304 (377)
T ss_dssp             SCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             cccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHH
Confidence            4899999999999999999999987543322111112223456799999998665 458999998864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.37  E-value=1.1e-14  Score=80.33  Aligned_cols=64  Identities=14%  Similarity=0.131  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCC--CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG--YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~--~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.+  +.+|++|||+++.+.........   .++..|||||++.+..+ ..+|+||+|+.
T Consensus       279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~---~GT~~y~APEv~~~~~y~~~~DiWSlGvi  345 (573)
T 3uto_A          279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAPEVAEGKPVGYYTDMWSVGVL  345 (573)
T ss_dssp             CCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEE---CSSGGGCCHHHHTTCCBCHHHHHHHHHHH
T ss_pred             ccCChhhccccCCCCCCEEEeeccceeEccCCCceeee---EECccccCHHHhCCCCCCcHHHHHHHHHH
Confidence            5899999999854  78999999999876544322222   12345999999987664 47899998863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.37  E-value=2e-14  Score=76.53  Aligned_cols=65  Identities=11%  Similarity=0.051  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++........  ......++..|+|||++.... ...+|+|++|+.
T Consensus       177 rDLKp~NILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvl  242 (396)
T 4dc2_A          177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL  242 (396)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCCHHHEEECCCCCEEEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHH
Confidence            48999999999999999999999875322211  111112345699999998765 458999998864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.35  E-value=6.5e-14  Score=73.12  Aligned_cols=65  Identities=12%  Similarity=0.086  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++......... . .....+..|+|||++.... ...+|+|++|+.
T Consensus       129 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  194 (337)
T 1o6l_A          129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-M-KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  194 (337)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC-B-CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHH
T ss_pred             CcCCHHHEEECCCCCEEEeeccchhhcccCCCc-c-cccccChhhCChhhhcCCCCCchhhcccchhH
Confidence            489999999999999999999998753222111 1 1112234599999998765 568999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.35  E-value=1.5e-14  Score=76.27  Aligned_cols=67  Identities=27%  Similarity=0.536  Sum_probs=48.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       215 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i  282 (382)
T 3tt0_A          215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL  282 (382)
T ss_dssp             SCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHH
Confidence            4899999999999999999999997654332111222223345699999998765 447999998864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.35  E-value=5.9e-15  Score=79.30  Aligned_cols=66  Identities=27%  Similarity=0.390  Sum_probs=49.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++....... ........+..|+|||.+.... ..++|+|++|+.
T Consensus       308 rDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~  374 (454)
T 1qcf_A          308 RDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL  374 (454)
T ss_dssp             SSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHH
Confidence            48999999999999999999999976533221 1122233456799999998665 458999998864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.35  E-value=2.7e-14  Score=76.75  Aligned_cols=66  Identities=14%  Similarity=0.097  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc-----cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV-----KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~-----~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++........... ....++..|+|||++.     ... ..++|+|++|+.
T Consensus       199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~-~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvi  270 (437)
T 4aw2_A          199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC  270 (437)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC-CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHH
T ss_pred             cccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc-ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHH
Confidence            58999999999999999999999975543322111 1112345699999987     223 457999998864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.34  E-value=3.5e-14  Score=79.43  Aligned_cols=65  Identities=15%  Similarity=0.141  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|||+.||+++.++.+|++|||++......... . ....++..|+|||++.... ...+|+|++|+.
T Consensus       466 rDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~-~-~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvi  531 (674)
T 3pfq_A          466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT-T-KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL  531 (674)
T ss_dssp             CCCCSTTEEECSSSCEEECCCTTCEECCCTTCC-B-CCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHH
T ss_pred             ccCChhhEEEcCCCcEEEeecceeeccccCCcc-c-ccccCCCcccCHhhhcCCCCCccceEechHHH
Confidence            589999999999999999999998753222111 1 1112345699999998766 458999998864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.33  E-value=5.3e-15  Score=76.60  Aligned_cols=67  Identities=28%  Similarity=0.426  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       141 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  208 (327)
T 3poz_A          141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT  208 (327)
T ss_dssp             SCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHH
Confidence            4899999999999999999999987554332111111222345699999998766 458999998864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.33  E-value=6.4e-14  Score=74.02  Aligned_cols=65  Identities=14%  Similarity=0.113  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++........  .......+..|+|||++.... ...+|+|++|+.
T Consensus       163 rDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  228 (373)
T 2r5t_A          163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV  228 (373)
T ss_dssp             CCCCGGGEEECTTSCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             cCCCHHHEEECCCCCEEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHH
Confidence            48999999999999999999999875332211  111112345699999998765 457999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.33  E-value=4.1e-14  Score=72.87  Aligned_cols=64  Identities=17%  Similarity=0.129  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........   ...+..|+|||.+.+....++|+|++|+.
T Consensus       181 ~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~DiwslG~i  244 (311)
T 3p1a_A          181 LDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV---QEGDPRYMAPELLQGSYGTAADVFSLGLT  244 (311)
T ss_dssp             CCCSGGGEEECGGGCEEECCCTTCEECC------C---CCCCGGGCCGGGGGTCCSTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEccceeeeecccCCCCcc---cCCCccccCHhHhcCCCCchhhHHHHHHH
Confidence            48999999999999999999999875433221111   12234599999988654668999998864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.32  E-value=1.5e-14  Score=74.86  Aligned_cols=67  Identities=27%  Similarity=0.378  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       139 ~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  206 (325)
T 3kex_A          139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT  206 (325)
T ss_dssp             SCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence            4899999999999999999999997654332111111222344699999998665 448999998863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.31  E-value=1.5e-14  Score=78.54  Aligned_cols=66  Identities=24%  Similarity=0.458  Sum_probs=49.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++...... .........+..|+|||.+.... ..++|+|++|+.
T Consensus       342 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~  408 (495)
T 1opk_A          342 RNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL  408 (495)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CCCChhhEEECCCCcEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHH
Confidence            4899999999999999999999998654332 22222334456799999998665 458999998864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.31  E-value=6.6e-14  Score=73.33  Aligned_cols=65  Identities=17%  Similarity=0.154  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......... . ....++..|+|||++.... ...+|+|++|+.
T Consensus       142 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  207 (345)
T 1xjd_A          142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-T-NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVL  207 (345)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC-B-CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             CCCChhhEEECCCCCEEEeEChhhhhcccCCCc-c-cCCCCCcccCChhhhcCCCCCChhhhHHHHHH
Confidence            489999999999999999999998753322111 1 1112234599999998765 557999998764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.31  E-value=6.9e-14  Score=73.44  Aligned_cols=65  Identities=15%  Similarity=0.141  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......... .. ...++..|+|||++.... ...+|+|++|+.
T Consensus       145 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~-~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  210 (353)
T 2i0e_A          145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT-TK-TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL  210 (353)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC-BC-CCCSCGGGCCHHHHTTCCBSTHHHHHHHHHH
T ss_pred             ccCCHHHEEEcCCCcEEEEeCCcccccccCCcc-cc-cccCCccccChhhhcCCCcCCcccccchHHH
Confidence            489999999999999999999998753222111 11 112234599999998665 457899988764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.30  E-value=6.8e-14  Score=75.01  Aligned_cols=65  Identities=12%  Similarity=0.045  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.........  .....++..|+|||++.... ...+|+|++|+.
T Consensus       273 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  338 (446)
T 4ejn_A          273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  338 (446)
T ss_dssp             CCCCGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEccCCCceeccCCCcc--cccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence            489999999999999999999998753322111  11112345699999998765 458999998864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.29  E-value=2.1e-14  Score=73.98  Aligned_cols=67  Identities=25%  Similarity=0.630  Sum_probs=42.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       161 ~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          161 RDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             SCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHH
Confidence            4899999999999999999999997654332221221222345699999988765 458999998763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.29  E-value=8.6e-14  Score=72.80  Aligned_cols=65  Identities=11%  Similarity=0.047  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......... . .....+..|+|||++.... ...+|+|++|+.
T Consensus       134 rDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~-~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  199 (345)
T 3a8x_A          134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-T-STFCGTPNYIAPEILRGEDYGFSVDWWALGVL  199 (345)
T ss_dssp             CCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC-B-CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             cCCCHHHEEECCCCCEEEEeccccccccCCCCc-c-cccCCCccccCccccCCCCCChHHhHHHHHHH
Confidence            489999999999999999999998753222111 1 1112234599999998755 458999988764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.29  E-value=9e-14  Score=74.31  Aligned_cols=66  Identities=14%  Similarity=0.084  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-------~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++............ ...++..|+|||++..       .. ...+|+|++|+.
T Consensus       186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~-~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi  259 (412)
T 2vd5_A          186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL-VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF  259 (412)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECS-SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred             cccCHHHeeecCCCCEEEeechhheeccCCCccccc-eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence            489999999999999999999999765433211111 1122446999999872       22 457999998864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.29  E-value=1e-13  Score=74.87  Aligned_cols=64  Identities=17%  Similarity=0.140  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++.........   ....+..|+|||++.+.. ..++|+|++|+.
T Consensus       188 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  252 (464)
T 3ttj_A          188 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT---PYVVTRYYRAPEVILGMGYKENVDIWSVGCI  252 (464)
T ss_dssp             CCCCGGGEEECTTSCEEECCCCCC-----CCCC-------CCCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             CCCChHhEEEeCCCCEEEEEEEeeeecCCCcccC---CCcccccccCHHHHcCCCCCHHHHHHHHHHH
Confidence            4899999999999999999999997643322111   112234589999998765 458999998763

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.29  E-value=2.3e-14  Score=79.47  Aligned_cols=67  Identities=30%  Similarity=0.404  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++...... ..........+..|+|||++.... ..++|+|++|+.
T Consensus       460 rDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~  528 (613)
T 2ozo_A          460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT  528 (613)
T ss_dssp             SCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999997654321 111111223345699999998665 458999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.29  E-value=9.3e-14  Score=71.24  Aligned_cols=65  Identities=18%  Similarity=0.192  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++......... . .....+..|+|||.+.... ..++|+|++|+.
T Consensus       140 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  205 (297)
T 3fxz_A          140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-R-STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  205 (297)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-B-CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEeeCCCceecCCcccc-c-CCccCCcCccChhhhcCCCCCcHHHHHHHHHH
Confidence            489999999999999999999998754433211 1 1112234599999998766 468999998764

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.29  E-value=2.3e-14  Score=75.18  Aligned_cols=65  Identities=11%  Similarity=0.056  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.........  ......+..|+|||++.... ...+|+|++|+.
T Consensus       148 rDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  213 (353)
T 3txo_A          148 RDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVL  213 (353)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHH
T ss_pred             cCCCHHHEEECCCCCEEEccccceeecccCCcc--ccccCCCcCeEChhhcCCCCcCCccCCCcchHH
Confidence            489999999999999999999998753322111  11112234599999988654 458999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.28  E-value=2.6e-14  Score=74.46  Aligned_cols=67  Identities=27%  Similarity=0.507  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       217 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  284 (359)
T 3vhe_A          217 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  284 (359)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHH
Confidence            4899999999999999999999997553332111222223344699999988665 458999998864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.28  E-value=1.1e-13  Score=74.37  Aligned_cols=67  Identities=19%  Similarity=0.167  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-------------------------ecCCCcccceeEEecccccc-C
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-------------------------DLGGKSALPIRWMAWESIVK-V   54 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~aPe~~~~-~   54 (69)
                      .|||+.||+++.++.+|++|||+++........                         .......++..|+|||++.. .
T Consensus       180 rDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~  259 (458)
T 3rp9_A          180 RDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE  259 (458)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCC
T ss_pred             CCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCC
Confidence            589999999999999999999999764321100                         00111122345899998643 3


Q ss_pred             C-CCCCCceEEEEe
Q psy10556         55 P-SQDGPSQSYRIF   67 (69)
Q Consensus        55 ~-~~~~~~w~~~i~   67 (69)
                      . ...+|+|++|+.
T Consensus       260 ~~~~~~DiwSlG~i  273 (458)
T 3rp9_A          260 NYTEAIDVWSIGCI  273 (458)
T ss_dssp             CCCTHHHHHHHHHH
T ss_pred             CCCcHhHHHHHHHH
Confidence            3 457899998864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.28  E-value=1.5e-13  Score=75.86  Aligned_cols=64  Identities=14%  Similarity=0.022  Sum_probs=34.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i   66 (69)
                      +||||.|||++.++.+|++|||+++.......  ......++..||+||.+.+......|+|+.++
T Consensus       363 RDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~--~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~  426 (569)
T 4azs_A          363 DDVRPWNVMVDARQHARLIDFGSIVTTPQDCS--WPTNLVQSFFVFVNELFAENKSWNGFWRSAPV  426 (569)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTEESCC---C--CSHHHHHHHHHHHHHHC---------------
T ss_pred             ccCchHhEEECCCCCEEEeecccCeeCCCCCc--cccCceechhhccHHHhCCCCCCccccccccc
Confidence            59999999999999999999999976533211  11111233459999999865556788887665

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.28  E-value=1.4e-13  Score=70.60  Aligned_cols=64  Identities=17%  Similarity=0.176  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+..........   ....+..|+|||.+.... ..++|+|++|+.
T Consensus       144 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  208 (308)
T 3g33_A          144 RDLKPENILVTSGGTVKLADFGLARIYSYQMALT---PVVVTLWYRAPEVLLQSTYATPVDMWSVGCI  208 (308)
T ss_dssp             SCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSG---GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEeeCccccccCCCcccC---CccccccccCchHHcCCCCCchHHHHHHHHH
Confidence            4899999999999999999999997543322111   112234599999997665 568999998763

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.27  E-value=1e-13  Score=74.04  Aligned_cols=66  Identities=12%  Similarity=0.144  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-----~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++........... ....++..|+|||++....     ...+|+|++|+.
T Consensus       192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~-~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi  262 (410)
T 3v8s_A          192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  262 (410)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCTTSEEEC-CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred             ccCCHHHeeECCCCCEEEeccceeEeeccCCcccc-cCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence            48999999999999999999999976543321111 1122345699999997543     247899998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.27  E-value=1.8e-14  Score=77.44  Aligned_cols=66  Identities=23%  Similarity=0.357  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|++++||+++.++.+|++|||+++....... ........+..|+|||.+.... ..++|+|++|+.
T Consensus       304 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~  370 (452)
T 1fmk_A          304 RDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  370 (452)
T ss_dssp             SCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChhhEEECCCCCEEECCCccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHH
Confidence            48999999999999999999999976543221 1111223456799999988666 458999998864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.27  E-value=8e-14  Score=73.05  Aligned_cols=67  Identities=10%  Similarity=0.080  Sum_probs=47.2

Q ss_pred             CCcccceeEEc--CCCeEEEcccCcccccccCcceec-----CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH--AGYSIKISNFGVVRNLYAADYYDL-----GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~--~~~~~kl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++  .++.+|++|||+++.+........     ......+..|+|||.+.... ..++|+|++|+.
T Consensus       176 rDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  250 (364)
T 3op5_A          176 GDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC  250 (364)
T ss_dssp             CCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence            48999999999  889999999999975443211100     01112345699999998765 457899998864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.27  E-value=1.1e-13  Score=76.09  Aligned_cols=65  Identities=17%  Similarity=0.088  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........  ...++..|+|||++.+.. ...+|+|++|+.
T Consensus       313 rDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~--~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvi  378 (543)
T 3c4z_A          313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGTPGFMAPELLLGEEYDFSVDYFALGVT  378 (543)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBC--CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             cCCChHHEEEeCCCCEEEeecceeeeccCCCcccc--cccCCccccChhhhcCCCCChHHhcCcchHH
Confidence            48999999999999999999999976543321111  112234599999998765 457999998864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.27  E-value=4.8e-14  Score=73.19  Aligned_cols=67  Identities=31%  Similarity=0.561  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.................+..|+|||.+.... ...+|+|++|+.
T Consensus       196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  263 (344)
T 1rjb_A          196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL  263 (344)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHH
Confidence            4899999999999999999999997554332111111222234599999987655 457899988764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.27  E-value=7.6e-14  Score=71.54  Aligned_cols=67  Identities=30%  Similarity=0.572  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ...+|+|++|+.
T Consensus       174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  241 (314)
T 2ivs_A          174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL  241 (314)
T ss_dssp             CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHH
Confidence            4899999999999999999999987654332222222223345699999988655 457999988753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.27  E-value=2.9e-14  Score=73.96  Aligned_cols=67  Identities=28%  Similarity=0.426  Sum_probs=42.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++.................+..|+|||.+.... ..++|+|++|+.
T Consensus       141 ~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  208 (327)
T 3lzb_A          141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT  208 (327)
T ss_dssp             SCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHH
Confidence            4899999999999999999999997653322111111222345699999998765 448999988763

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.27  E-value=2.3e-13  Score=70.40  Aligned_cols=67  Identities=16%  Similarity=0.075  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~------~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||.+.................+..|+|||.+....      ..++|+|++|+.
T Consensus       155 ~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i  227 (322)
T 3soc_A          155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV  227 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHH
Confidence            4899999999999999999999997544332111111122345699999987632      235699998764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.26  E-value=1.4e-13  Score=72.61  Aligned_cols=67  Identities=15%  Similarity=0.123  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-------------------eecCCCcccceeEEeccccccC-C-CCCC
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-------------------YDLGGKSALPIRWMAWESIVKV-P-SQDG   59 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~aPe~~~~~-~-~~~~   59 (69)
                      .|+|+.||+++.++.+|++|||+++.+.....                   .........+..|+|||++.+. . ...+
T Consensus       133 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  212 (388)
T 3oz6_A          133 RDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI  212 (388)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHH
T ss_pred             CCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChh
Confidence            48999999999999999999999975432100                   0000111233458999998763 3 4578


Q ss_pred             CceEEEEe
Q psy10556         60 PSQSYRIF   67 (69)
Q Consensus        60 ~~w~~~i~   67 (69)
                      |+|++|+.
T Consensus       213 DiwSlG~i  220 (388)
T 3oz6_A          213 DMWSLGCI  220 (388)
T ss_dssp             HHHHHHHH
T ss_pred             hHHHHHHH
Confidence            99998763

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.26  E-value=2.2e-14  Score=79.82  Aligned_cols=67  Identities=27%  Similarity=0.433  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCc-ceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAAD-YYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++.+.... ..........+..|+|||++.... ..++|+|++|+.
T Consensus       493 rDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~  561 (635)
T 4fl3_A          493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL  561 (635)
T ss_dssp             SCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999997654322 111122223355699999998755 458999998864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.26  E-value=8.3e-14  Score=72.22  Aligned_cols=67  Identities=27%  Similarity=0.547  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       181 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  248 (334)
T 2pvf_A          181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL  248 (334)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHH
Confidence            4899999999999999999999987654332222222223345699999987655 457999988763

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.25  E-value=9.6e-14  Score=71.14  Aligned_cols=67  Identities=33%  Similarity=0.567  Sum_probs=48.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       169 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  236 (313)
T 1t46_A          169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF  236 (313)
T ss_dssp             SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHH
Confidence            4899999999999999999999987654332211222222344699999987655 457999988753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.25  E-value=2.2e-13  Score=69.49  Aligned_cols=65  Identities=14%  Similarity=0.109  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+........  .......+..|+|||.+.+..  ..++|+|++|+.
T Consensus       125 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  191 (292)
T 3o0g_A          125 RDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI  191 (292)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEeecccceecCCccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHH
Confidence            48999999999999999999999975432211  111112234599999987654  457899998763

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.25  E-value=2.8e-13  Score=70.79  Aligned_cols=64  Identities=19%  Similarity=0.176  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........   ...+..|+|||.+.+..+  ..+|+|++|+.
T Consensus       132 ~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  197 (336)
T 3h4j_B          132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEVINGKLYAGPEVDVWSCGIV  197 (336)
T ss_dssp             CCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCC---CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHH
T ss_pred             cCCchhhEEEcCCCCEEEEEeccceeccCCccccc---ccCCcCcCCHHHHcCCCCCCCccchhHHHHH
Confidence            48999999999999999999999876543321111   122345999999986553  36899998764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.25  E-value=5.4e-13  Score=70.81  Aligned_cols=64  Identities=17%  Similarity=0.023  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC----CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV----PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~----~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.++++|||++...........   ..++..|+|||++...    ....+|+|++|+.
T Consensus       139 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~---~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i  206 (384)
T 4fr4_A          139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT---MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT  206 (384)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC---CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHH
T ss_pred             ccCcHHHeEECCCCCEEEeccceeeeccCCCceec---cCCCccccCCeeeccCCCCCCCccceeechHHH
Confidence            48999999999999999999999976543221111   1223459999998742    2457899998864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.25  E-value=6.1e-14  Score=75.39  Aligned_cols=62  Identities=24%  Similarity=0.413  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|++++||+++.++.+|++|||+++......   .  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       313 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~--~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~  375 (450)
T 1k9a_A          313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---D--TGKLPVKWTAPEALREKKFSTKSDVWSFGIL  375 (450)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHH
T ss_pred             CCCCHhhEEECCCCCEEEeeCCCcccccccc---c--CCCCCcceeCHHHhcCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999987532211   1  112355699999998766 458999998864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.24  E-value=3.7e-13  Score=69.78  Aligned_cols=62  Identities=21%  Similarity=0.250  Sum_probs=46.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++....... . .   ...+..|+|||++.... ...+|+|++|+.
T Consensus       130 rDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-~-~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  192 (318)
T 1fot_A          130 RDLKPENILLDKNGHIKITDFGFAKYVPDVT-Y-T---LCGTPDYIAPEVVSTKPYNKSIDWWSFGIL  192 (318)
T ss_dssp             CCCCGGGEEECTTSCEEECCCSSCEECSSCB-C-C---CCSCTTTCCHHHHTTCCBCTTHHHHHHHHH
T ss_pred             cCCChheEEEcCCCCEEEeecCcceecCCcc-c-c---ccCCccccCHhHhcCCCCCcccchhhhHHH
Confidence            4899999999999999999999997543221 1 1   11234599999998765 558999998764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.24  E-value=2.9e-13  Score=69.90  Aligned_cols=65  Identities=14%  Similarity=0.108  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+........  .......+..|+|||++....  ..++|+|++|+.
T Consensus       132 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  198 (317)
T 2pmi_A          132 RDLKPQNLLINKRGQLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCI  198 (317)
T ss_dssp             CCCCGGGEEECTTCCEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CCCChHHeEEcCCCCEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999875432211  111112234599999987533  457899998763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.24  E-value=2.8e-13  Score=70.14  Aligned_cols=65  Identities=18%  Similarity=0.140  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++...........  ....+..|+|||.+.... ..++|+|++|+.
T Consensus       165 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~i  230 (321)
T 2c30_A          165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK--SLVGTPYWMAPEVISRSLYATEVDIWSLGIM  230 (321)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC--CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCcEEEeeeeeeeecccCccccc--cccCCccccCHhhhcCCCCCchhhHHHHHHH
Confidence            48999999999999999999999875433211111  112234599999998765 457999998863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.24  E-value=1e-13  Score=71.41  Aligned_cols=67  Identities=34%  Similarity=0.732  Sum_probs=48.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ...+|+|++|+.
T Consensus       162 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  229 (322)
T 1p4o_A          162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  229 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHH
Confidence            4899999999999999999999987554332222222222234599999988655 457899988753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.24  E-value=3.2e-14  Score=73.71  Aligned_cols=67  Identities=40%  Similarity=0.754  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  265 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV  265 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHH
Confidence            4899999999999999999999987543322111111222345699999988655 458999988763

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.24  E-value=1.8e-13  Score=70.55  Aligned_cols=65  Identities=23%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++........  .......+..|+|||.+.... ..++|+|++|+.
T Consensus       163 ~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  228 (309)
T 3p86_A          163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI  228 (309)
T ss_dssp             TTCCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             CCCChhhEEEeCCCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCchhhHHHHHHH
Confidence            48999999999999999999999864332211  111112234599999998765 568999998764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.24  E-value=3.2e-13  Score=71.78  Aligned_cols=64  Identities=13%  Similarity=0.143  Sum_probs=43.9

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.   ++.+|++|||+++.........   ....+..|+|||++.... ...+|+|++|+.
T Consensus       185 rDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  252 (400)
T 1nxk_A          185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT---TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI  252 (400)
T ss_dssp             CCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHH
T ss_pred             cCcCcceEEEecCCCCccEEEEecccccccCCCCccc---cCCCCCCccCHhhcCCCCCCCcccHHHHHHH
Confidence            489999999987   7889999999997543222111   112234599999997655 457999998864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.24  E-value=3e-14  Score=77.93  Aligned_cols=66  Identities=23%  Similarity=0.357  Sum_probs=49.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .||+++||+++.++.+|++|||+++....... ........+..|+|||.+.... ..++|+|++|+.
T Consensus       387 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~  453 (535)
T 2h8h_A          387 RDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  453 (535)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHH
Confidence            48999999999999999999999976543221 1122223456799999988665 458999998864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.24  E-value=1.4e-13  Score=70.99  Aligned_cols=67  Identities=16%  Similarity=0.223  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       163 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  230 (321)
T 2qkw_B          163 RDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVV  230 (321)
T ss_dssp             SCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHH
Confidence            4899999999999999999999987533221111111112234599999987655 558999998763

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.24  E-value=2.3e-13  Score=70.82  Aligned_cols=64  Identities=19%  Similarity=0.138  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........   ...+..|+|||.+.+..+  .++|+|++|+.
T Consensus       138 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  203 (328)
T 3fe3_A          138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVI  203 (328)
T ss_dssp             SCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT---TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred             cCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc---ccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence            48999999999999999999999975543321111   122345999999987653  36899998763

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=3.6e-13  Score=69.61  Aligned_cols=67  Identities=15%  Similarity=0.112  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceec--CCCcccceeEEeccccccCCC-CC------CCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDL--GGKSALPIRWMAWESIVKVPS-QD------GPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~-~~------~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++...........  ......+..|+|||.+..... ..      +|+|++|+.
T Consensus       166 ~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i  241 (337)
T 3mdy_A          166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI  241 (337)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred             cccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence            48999999999999999999999865433221111  111123456999999986553 23      799998864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.23  E-value=2.1e-13  Score=72.98  Aligned_cols=67  Identities=18%  Similarity=0.186  Sum_probs=43.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce--------------------ecCCCcccceeEEeccccccCC--CCC
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY--------------------DLGGKSALPIRWMAWESIVKVP--SQD   58 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~aPe~~~~~~--~~~   58 (69)
                      .|+|+.||+++.++.+|++|||+++........                    ........+..|+|||++....  ...
T Consensus       153 rDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~  232 (432)
T 3n9x_A          153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKS  232 (432)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTH
T ss_pred             CCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcc
Confidence            489999999999999999999999764322110                    0011112244589999864333  457


Q ss_pred             CCceEEEEe
Q psy10556         59 GPSQSYRIF   67 (69)
Q Consensus        59 ~~~w~~~i~   67 (69)
                      +|+|++|+.
T Consensus       233 ~DiwSlG~i  241 (432)
T 3n9x_A          233 IDIWSTGCI  241 (432)
T ss_dssp             HHHHHHHHH
T ss_pred             cccchHHHH
Confidence            899998763

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.23  E-value=2.5e-13  Score=75.19  Aligned_cols=64  Identities=14%  Similarity=0.079  Sum_probs=47.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++............   .++..|+|||++.... ...+|+|++|+.
T Consensus       310 rDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~---~GT~~Y~APEvl~~~~~~~~~DiwSLGvi  374 (576)
T 2acx_A          310 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEVVKNERYTFSPDWWALGCL  374 (576)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECC---CSCGGGCCHHHHTTCEESSHHHHHHHHHH
T ss_pred             cCCchheEEEeCCCCeEEEecccceecccCcccccc---CCCccccCHHHHcCCCCCccchHHHHHHH
Confidence            489999999999999999999999765433221111   2234599999998755 568999998864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.23  E-value=2.4e-13  Score=70.02  Aligned_cols=67  Identities=15%  Similarity=0.081  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce----------ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY----------DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++.........          ........+..|+|||.+.... ..++|+|++|+.
T Consensus       188 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  265 (332)
T 3qd2_B          188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI  265 (332)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHH
T ss_pred             cCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHH
Confidence            489999999999999999999998765432110          0111122345699999998765 557999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.23  E-value=3e-13  Score=69.75  Aligned_cols=65  Identities=14%  Similarity=0.132  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+.........  ......+..|+|||.+....  ...+|+|++|+.
T Consensus       143 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  209 (311)
T 3niz_A          143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI  209 (311)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             CCCchHhEEECCCCCEEEccCcCceecCCCccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHH
Confidence            489999999999999999999999754322111  11112244599999987533  457899988763

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.23  E-value=9.2e-14  Score=70.90  Aligned_cols=67  Identities=15%  Similarity=0.047  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceec--CCCcccceeEEeccccccCCC-------CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDL--GGKSALPIRWMAWESIVKVPS-------QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aPe~~~~~~~-------~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........  ......+..|+|||.+.....       .++|+|++|+.
T Consensus       137 ~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~i  212 (301)
T 3q4u_A          137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV  212 (301)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHH
Confidence            48999999999999999999999865433321111  111123456999999986531       36899998863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.23  E-value=3.7e-13  Score=68.80  Aligned_cols=65  Identities=22%  Similarity=0.159  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++............  ...+..|+|||.+....    ...+|+|++|+.
T Consensus       161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~  229 (298)
T 2zv2_A          161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN--TVGTPAFMAPESLSETRKIFSGKALDVWAMGVT  229 (298)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECC--CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred             cCCCHHHEEECCCCCEEEecCCCccccccccccccC--CcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence            489999999999999999999998765433211111  12234599999987643    235799988763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.23  E-value=2.5e-13  Score=70.47  Aligned_cols=65  Identities=14%  Similarity=0.136  Sum_probs=43.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||++.........  ......+..|+|||.+.... ...+|+|++|+.
T Consensus       145 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  210 (327)
T 3a62_A          145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THTFCGTIEYMAPEILMRSGHNRAVDWWSLGAL  210 (327)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHH
T ss_pred             ccCCHHHeEECCCCcEEEEeCCcccccccCCcc--ccccCCCcCccCHhhCcCCCCCCcccchhHHHH
Confidence            489999999999999999999998653322111  11112244599999998655 457899988763

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.23  E-value=8.7e-14  Score=71.00  Aligned_cols=67  Identities=25%  Similarity=0.366  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++........ .........+..|+|||.+.... ..++|+|++|+.
T Consensus       138 ~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  206 (295)
T 3ugc_A          138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV  206 (295)
T ss_dssp             SCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHH
Confidence            48999999999999999999999976543221 11111222345599999988665 458999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.22  E-value=9.6e-14  Score=71.95  Aligned_cols=67  Identities=27%  Similarity=0.335  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++........ .........+..|+|||.+.... ...+|+|++|+.
T Consensus       175 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  243 (325)
T 3kul_A          175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV  243 (325)
T ss_dssp             SCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999976543211 11111222344699999998655 457899988764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.22  E-value=3.6e-13  Score=68.94  Aligned_cols=66  Identities=15%  Similarity=0.169  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||.+......... .......+..|+|||.+.... ...+|+|++|+.
T Consensus       135 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  201 (294)
T 4eqm_A          135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV  201 (294)
T ss_dssp             CCCCGGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEeCCCcccccccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHH
Confidence            489999999999999999999998754332211 111112244699999998765 457899988763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.22  E-value=1.1e-13  Score=71.02  Aligned_cols=67  Identities=21%  Similarity=0.616  Sum_probs=42.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       171 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  238 (313)
T 3brb_A          171 RDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT  238 (313)
T ss_dssp             CCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHH
Confidence            4899999999999999999999987544332111111122344699999998665 447899998763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=8.7e-14  Score=73.42  Aligned_cols=67  Identities=22%  Similarity=0.609  Sum_probs=40.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++.........  .......+..|+|||.+.... ..++|+|++|+.
T Consensus       216 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i  285 (373)
T 3c1x_A          216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  285 (373)
T ss_dssp             SCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999997543322111  111223345699999988665 458999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.21  E-value=6e-13  Score=71.68  Aligned_cols=65  Identities=15%  Similarity=0.129  Sum_probs=46.3

Q ss_pred             CCcccceeEEc---CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH---AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~---~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++   .++.+|++|||++........  .......+..|+|||++.... ...+|+|++|+.
T Consensus       134 rDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvi  202 (444)
T 3soa_A          134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVI  202 (444)
T ss_dssp             CCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             cCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHH
Confidence            48999999998   457899999999975543321  111112344699999998755 458999998763

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.21  E-value=2.2e-14  Score=75.38  Aligned_cols=67  Identities=30%  Similarity=0.641  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.+   ..+|++|||+++................+..|+|||.+.... ..++|+|++|+.
T Consensus       205 rDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i  275 (367)
T 3l9p_A          205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  275 (367)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHH
Confidence            4899999999854   459999999987543221111111122345699999987665 458999998864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.21  E-value=1.5e-13  Score=71.21  Aligned_cols=67  Identities=19%  Similarity=0.131  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++..+..............+..|+|||.+.....  .++|+|++|+.
T Consensus       129 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  197 (323)
T 3tki_A          129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  197 (323)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHH
T ss_pred             cccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHH
Confidence            48999999999999999999999975432221111111123445999999986553  36899988764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.21  E-value=6.7e-14  Score=72.38  Aligned_cols=67  Identities=31%  Similarity=0.557  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.................+..|+|||.+.... ...+|+|++|+.
T Consensus       188 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  255 (333)
T 2i1m_A          188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL  255 (333)
T ss_dssp             SCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHH
Confidence            4899999999999999999999997544332111222222344699999987655 457999988764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.21  E-value=3.7e-13  Score=70.78  Aligned_cols=64  Identities=17%  Similarity=0.140  Sum_probs=41.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++..........   ....+..|+|||++.... ..++|+|++|+.
T Consensus       151 ~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  215 (371)
T 2xrw_A          151 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT---PYVVTRYYRAPEVILGMGYKENVDIWSVGCI  215 (371)
T ss_dssp             SCCCGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             ccCCHHHEEEcCCCCEEEEEeecccccccccccC---CceecCCccCHHHhcCCCCCchHhHHHHHHH
Confidence            4899999999999999999999987543221111   112234599999998765 568999998763

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.21  E-value=1.2e-13  Score=72.52  Aligned_cols=62  Identities=5%  Similarity=0.065  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc--CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK--VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.......  ....   ....|+|||.+..  .. ..++|+|++|+.
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~---~t~~y~aPE~~~~~~~~~~~~~DiwSlG~i  282 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG--PASS---VPVTYAPREFLNASTATFTHALNAWQLGLS  282 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCEE--EGGG---SCGGGCCHHHHTCSEEECCHHHHHHHHHHH
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCCc--cCcc---CCcCCcChhhccCCCCCcCccccHHHHHHH
Confidence            5899999999999999999999997543221  1111   1245999999976  33 447999998864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.20  E-value=4.1e-13  Score=68.79  Aligned_cols=67  Identities=18%  Similarity=0.199  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.+....++|+|++|+.
T Consensus       157 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~i  223 (307)
T 2nru_A          157 RDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVV  223 (307)
T ss_dssp             SCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHH
Confidence            4899999999999999999999987543221111111112234599999987554668999988764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.20  E-value=6.9e-13  Score=70.34  Aligned_cols=64  Identities=17%  Similarity=0.061  Sum_probs=45.7

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++ .++.+|++|||++...........   ...+..|+|||.+.+..  ..++|+|++|+.
T Consensus       165 rDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i  231 (394)
T 4e7w_A          165 RDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---YICSRYYRAPELIFGATNYTTNIDIWSTGCV  231 (394)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCS---SCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcc---cccCcCccCHHHHcCCCCCCcHHHHHHHHHH
Confidence            48999999998 789999999999976433221111   11234599999987543  457899998763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.19  E-value=7.9e-13  Score=68.93  Aligned_cols=64  Identities=17%  Similarity=0.094  Sum_probs=46.0

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++. ++.+|++|||++...........   ...+..|+|||.+....  ...+|+|++|+.
T Consensus       155 ~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  221 (360)
T 3e3p_A          155 RDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA---YICSRYYRAPELIFGNQHYTTAVDIWSVGCI  221 (360)
T ss_dssp             SCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCS---TTSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             CcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCccc---ccCCcceeCHHHHcCCCCCCcHHHHHHHHHH
Confidence            489999999996 89999999999976543321111   11234599999986543  457899998864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.19  E-value=2.8e-13  Score=71.78  Aligned_cols=66  Identities=15%  Similarity=0.163  Sum_probs=42.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----------C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----------P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----------~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++ ++.+|++|||++..+..............+..|+|||++...           . ..++|+|++|+.
T Consensus       179 rDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvi  256 (390)
T 2zmd_A          179 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI  256 (390)
T ss_dssp             CCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHH
T ss_pred             cCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHH
Confidence            48999999995 578999999999765432211111111234569999998641           2 346899998864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.19  E-value=1.2e-13  Score=72.79  Aligned_cols=67  Identities=25%  Similarity=0.332  Sum_probs=39.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++........ ........+..|+|||.+.... ..++|+|++|+.
T Consensus       171 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~i  239 (373)
T 2qol_A          171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV  239 (373)
T ss_dssp             SCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHH
Confidence            489999999999999999999998764432111 0111112245699999998665 457999998863

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.19  E-value=5.4e-13  Score=68.53  Aligned_cols=67  Identities=21%  Similarity=0.239  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceec------------CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDL------------GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........            ......+..|+|||.+.... ..++|+|++|+.
T Consensus       132 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  211 (310)
T 3s95_A          132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV  211 (310)
T ss_dssp             SCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999875432211100            00112234599999998765 458999998764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.19  E-value=1.2e-13  Score=70.84  Aligned_cols=67  Identities=27%  Similarity=0.507  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.... ..++|+|++|+.
T Consensus       172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  239 (316)
T 2xir_A          172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  239 (316)
T ss_dssp             SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHH
Confidence            4899999999999999999999987543322111111122234599999987655 458999988763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.18  E-value=1.5e-13  Score=73.28  Aligned_cols=61  Identities=5%  Similarity=-0.149  Sum_probs=43.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc----------cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV----------KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~----------~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......  ....   .. ..|+|||.+.          ... ..++|+|++|+.
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~---~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSP---IG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEE--ECCC---CC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCc--cccC---CC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            589999999999999999999998654322  1111   12 3499999983          222 347899998864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.18  E-value=5.6e-13  Score=71.38  Aligned_cols=62  Identities=18%  Similarity=0.029  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCe--EEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS--IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~--~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.  +|++|||++....... . .   ...+..|+|||++.... ...+|+|++|+.
T Consensus       224 rDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~-~-~---~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  288 (429)
T 3kvw_A          224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV-Y-T---YIQSRFYRAPEVILGARYGMPIDMWSLGCI  288 (429)
T ss_dssp             SCCSGGGEEESSTTSCCEEECCCTTCEETTCCC-C-S---SCSCGGGCCHHHHHTBCCCTHHHHHHHHHH
T ss_pred             CCCCHHHeEEccCCCcceEEeecccceecCCcc-c-c---cCCCCCccChHHHhCCCCCchHHHHhHHHH
Confidence            489999999998876  9999999986432221 1 1   11234599999998765 568999998864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.18  E-value=5.9e-13  Score=67.12  Aligned_cols=66  Identities=24%  Similarity=0.472  Sum_probs=48.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........... .....+..|+|||.+.... ..++|+|++|+.
T Consensus       128 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  194 (268)
T 3sxs_A          128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL  194 (268)
T ss_dssp             SSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC-CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHH
T ss_pred             CCcCcceEEECCCCCEEEccCccceecchhhhhcc-cCCCcCcccCCHHHHhccCCchhhhhHHHHHH
Confidence            48999999999999999999999875543332222 2222344599999988655 568999988753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.18  E-value=8.6e-13  Score=68.76  Aligned_cols=67  Identities=12%  Similarity=0.081  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc--eecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY--YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||.+........  .........+..|+|||.+.+..  ..++|+|++|+.
T Consensus       148 ~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  218 (351)
T 3mi9_A          148 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  218 (351)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHH
Confidence            48999999999999999999999875432110  01111112244599999987533  457999998763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.18  E-value=4.6e-13  Score=69.11  Aligned_cols=66  Identities=15%  Similarity=0.140  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+............ ....+..|+|||.+.... ..++|+|++|+.
T Consensus       158 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  224 (326)
T 3uim_A          158 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVM  224 (326)
T ss_dssp             CCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC-CCCSCGGGCCHHHHHHSEECHHHHHHHHHHH
T ss_pred             CCCchhhEEECCCCCEEeccCccccccCcccccccc-cccCCcCccCHHHhccCCCCccccchhHHHH
Confidence            489999999999999999999999754322211111 111244699999987655 458999988763

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.18  E-value=1.8e-13  Score=70.81  Aligned_cols=67  Identities=19%  Similarity=0.173  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce------ecCCCcccceeEEeccccccCC--------CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY------DLGGKSALPIRWMAWESIVKVP--------SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~------~~~~~~~~~~~~~aPe~~~~~~--------~~~~~~w~~~i   66 (69)
                      .|+|+.||+++.++.+|++|||++.........      ........+..|+|||.+....        ..++|+|++|+
T Consensus       144 ~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~  223 (336)
T 3g2f_A          144 RDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL  223 (336)
T ss_dssp             SSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHH
T ss_pred             cccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHH
Confidence            489999999999999999999999754322110      0111112345699999987521        23689999876


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       224 i  224 (336)
T 3g2f_A          224 I  224 (336)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.17  E-value=2.6e-13  Score=75.86  Aligned_cols=66  Identities=29%  Similarity=0.487  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++........... .....+..|+|||.+.... ...+|+|++|+.
T Consensus       515 rDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i  581 (656)
T 2j0j_A          515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVC  581 (656)
T ss_dssp             SCCSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cccchHhEEEeCCCCEEEEecCCCeecCCCcceec-cCCCCCcceeCHHHhcCCCCCchhhHHHHHHH
Confidence            48999999999999999999999976543321111 1122345699999997655 447999998863

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.17  E-value=7.1e-13  Score=69.12  Aligned_cols=65  Identities=11%  Similarity=0.083  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++........  .......+..|+|||.+....  ...+|+|++|+.
T Consensus       136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  202 (346)
T 1ua2_A          136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI  202 (346)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHH
Confidence            48999999999999999999999976533221  111112234599999987543  347899998763

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.17  E-value=3e-13  Score=70.46  Aligned_cols=66  Identities=15%  Similarity=0.149  Sum_probs=41.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----------~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++ ++.+|++|||++.................+..|+|||.+..           .. ..++|+|++|+.
T Consensus       132 rDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~i  209 (343)
T 3dbq_A          132 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI  209 (343)
T ss_dssp             CCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHH
T ss_pred             CCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHH
Confidence            48999999997 67899999999976543221111111123456999999864           22 336899988764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.17  E-value=3.1e-13  Score=68.87  Aligned_cols=65  Identities=15%  Similarity=0.104  Sum_probs=44.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+........  .......+..|+|||.+....  ..++|+|++|+.
T Consensus       124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  190 (288)
T 1ob3_A          124 RDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI  190 (288)
T ss_dssp             SCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEeECccccccCcccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999875432211  111112234599999987533  457899988763

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.17  E-value=1.1e-12  Score=69.04  Aligned_cols=64  Identities=14%  Similarity=0.163  Sum_probs=46.0

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++    .+|+.|||++..........   ....+..|+|||++.... ...+|+|++|+.
T Consensus       139 rDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi  207 (361)
T 2yab_A          139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI  207 (361)
T ss_dssp             CCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccc---cCCCCccEECchHHcCCCCCccccHHHHHHH
Confidence            48999999998776    79999999997654322111   112234599999998655 457999998863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.17  E-value=7.4e-13  Score=69.43  Aligned_cols=62  Identities=13%  Similarity=0.123  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||++........     ....+..|+|||++.... ...+|+|++|+.
T Consensus       165 rDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  227 (350)
T 1rdq_E          165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----TLCGTPEALAPEIILSKGYNKAVDWWALGVL  227 (350)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECSSCBC-----CCEECGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCccceEEECCCCCEEEcccccceeccCCcc-----cccCCccccCHHHhcCCCCCCcCCEecccHh
Confidence            48999999999999999999999975433211     112234599999998765 458999988764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.16  E-value=4.4e-13  Score=69.44  Aligned_cols=67  Identities=12%  Similarity=0.115  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCe-----EEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS-----IKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~-----~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.     ++++|||++..........     .......+..|+|||.+.... ...+|+|++|+.
T Consensus       129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  206 (330)
T 2izr_A          129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHM  206 (330)
T ss_dssp             CCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             cCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHH
Confidence            489999999998876     9999999997643322110     011122345699999998765 447899998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.16  E-value=3.3e-13  Score=69.44  Aligned_cols=67  Identities=12%  Similarity=0.124  Sum_probs=42.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||.+......... ........+..|+|||.+.... ..++|+|++|+.
T Consensus       140 ~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  208 (311)
T 3ork_A          140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV  208 (311)
T ss_dssp             CCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHH
Confidence            489999999999999999999998754332111 1111112244699999998765 447899988763

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.16  E-value=2.4e-13  Score=71.55  Aligned_cols=61  Identities=5%  Similarity=-0.142  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----------C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----------P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----------~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......  ....   .. ..|+|||.+...           . ..++|+|++|+.
T Consensus       230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~---~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAR--VVSS---VS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTCE--EECC---CC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEechhheecCCc--ccCC---CC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            489999999999999999999999753221  1111   12 349999999876           4 457999998864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.16  E-value=1.2e-12  Score=69.07  Aligned_cols=62  Identities=19%  Similarity=0.116  Sum_probs=45.1

Q ss_pred             CCcccceeEEc--CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH--AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~--~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++  .++.+|++|||++....... . .   ...+..|+|||++.... ..++|+|++|+.
T Consensus       183 rDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~-~-~---~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i  247 (382)
T 2vx3_A          183 CDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-Y-Q---YIQSRFYRSPEVLLGMPYDLAIDMWSLGCI  247 (382)
T ss_dssp             CCCSGGGEEESSTTSCCEEECCCTTCEETTCCC-C-S---SCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCCcccEEEecCCCCcEEEEeccCceeccccc-c-c---ccCCccccChHHHcCCCCCcHHHHHHHHHH
Confidence            48999999995  46789999999997543221 1 1   11234599999998765 558999998864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.15  E-value=1.4e-12  Score=69.69  Aligned_cols=64  Identities=16%  Similarity=0.069  Sum_probs=44.5

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.+ +.+|++|||+++..........   ...+..|+|||++... . ...+|+|++|+.
T Consensus       180 rDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i  246 (420)
T 1j1b_A          180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPELIFGATDYTSSIDVWSAGCV  246 (420)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCS---CCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cCCChhhEEEeCCCCeEEeccchhhhhcccCCCcee---eeeCCCcCCHHHHcCCCCCCchhhhHHHHHH
Confidence            4899999999965 6789999999976433221111   1123459999998754 3 457899998863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.15  E-value=3.4e-12  Score=66.26  Aligned_cols=57  Identities=9%  Similarity=-0.126  Sum_probs=42.6

Q ss_pred             CCcccceeEEcCCC--------------------eEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCC
Q psy10556          1 MAESTKNCLVHAGY--------------------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGP   60 (69)
Q Consensus         1 ~dl~~~nil~~~~~--------------------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~   60 (69)
                      +|+|+.||+++.++                    .+|++|||+++.......       .++..|+|||++.+.....+|
T Consensus       186 rDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~-------~gt~~y~aPE~~~g~~~~~~D  258 (336)
T 2vuw_A          186 RDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIV-------VFCDVSMDEDLFTGDGDYQFD  258 (336)
T ss_dssp             SCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEE-------ECCCCTTCSGGGCCCSSHHHH
T ss_pred             CCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcE-------EEeecccChhhhcCCCcccee
Confidence            58999999999876                    899999999986433211       112349999999865555788


Q ss_pred             ceEE
Q psy10556         61 SQSY   64 (69)
Q Consensus        61 ~w~~   64 (69)
                      +|++
T Consensus       259 iwsl  262 (336)
T 2vuw_A          259 IYRL  262 (336)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            8864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.15  E-value=1.3e-12  Score=68.40  Aligned_cols=65  Identities=17%  Similarity=0.192  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++   .+|+.|||++.........  ......+..|+|||++.... ...+|+|++|+.
T Consensus       154 rDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  222 (351)
T 3c0i_A          154 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI  222 (351)
T ss_dssp             SCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCChHHeEEecCCCCCcEEEecCcceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHH
Confidence            48999999997654   4999999999765433211  11112244699999998765 457999988763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=6.4e-13  Score=69.59  Aligned_cols=66  Identities=14%  Similarity=0.112  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||+++.+...... .......+..|+|||.+....   ..++|+|++|+.
T Consensus       183 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~i  251 (355)
T 1vzo_A          183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL  251 (355)
T ss_dssp             CCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCcEEEeeCCCCeecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHH
Confidence            489999999999999999999998754322211 111112345699999998532   357899998763

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.15  E-value=2.6e-13  Score=68.92  Aligned_cols=66  Identities=29%  Similarity=0.487  Sum_probs=38.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||.+........... .....+..|+|||.+.... ...+|+|++|+.
T Consensus       140 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  206 (281)
T 1mp8_A          140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVC  206 (281)
T ss_dssp             SCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             ccccHHHEEECCCCCEEECccccccccCccccccc-ccCCCcccccChhhcccCCCCCccCchHHHHH
Confidence            48999999999999999999999876543221111 1112234599999987655 447899988753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.15  E-value=8.1e-13  Score=68.39  Aligned_cols=65  Identities=11%  Similarity=0.106  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||.+........  .......+..|+|||.+.+..  ...+|+|++|+.
T Consensus       124 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  190 (324)
T 3mtl_A          124 RDLKPQNLLINERGELKLADFGLARAKSIPTK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCI  190 (324)
T ss_dssp             SSCCGGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CCcCHHHEEECCCCCEEEccCcccccccCCcc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999875432211  111112234599999987633  457899988763

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.15  E-value=2e-12  Score=67.52  Aligned_cols=62  Identities=16%  Similarity=0.127  Sum_probs=45.4

Q ss_pred             CCcccceeEEcC-------------------------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC
Q psy10556          1 MAESTKNCLVHA-------------------------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP   55 (69)
Q Consensus         1 ~dl~~~nil~~~-------------------------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~   55 (69)
                      .|+|+.||+++.                         .+.+|++|||.+.......  .   ....+..|+|||++....
T Consensus       161 rDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~--~---~~~gt~~y~aPE~~~~~~  235 (360)
T 3llt_A          161 TDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH--G---SIINTRQYRAPEVILNLG  235 (360)
T ss_dssp             SCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC--C---SCCSCGGGCCHHHHTTCC
T ss_pred             CCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC--c---CccCcccccCcHHHcCCC
Confidence            489999999975                         7889999999997533221  1   112234599999998766


Q ss_pred             -CCCCCceEEEEe
Q psy10556         56 -SQDGPSQSYRIF   67 (69)
Q Consensus        56 -~~~~~~w~~~i~   67 (69)
                       ..++|+|++|+.
T Consensus       236 ~~~~~DiwslG~i  248 (360)
T 3llt_A          236 WDVSSDMWSFGCV  248 (360)
T ss_dssp             CCTTHHHHHHHHH
T ss_pred             CCCccchHHHHHH
Confidence             568999998763

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.14  E-value=1.4e-12  Score=67.63  Aligned_cols=64  Identities=16%  Similarity=0.165  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++    .+++.|||++...........   ...+..|+|||++.... ...+|+|++|+.
T Consensus       138 ~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  206 (326)
T 2y0a_A          138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVI  206 (326)
T ss_dssp             CCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCC---CCSCTTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcccc---ccCCcCcCCceeecCCCCCcHHHHHHHHHH
Confidence            48999999998877    799999999976533221111   12234599999998655 457999998763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.14  E-value=5.2e-13  Score=69.60  Aligned_cols=67  Identities=9%  Similarity=0.056  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCC--eEEEcccCcccccccCcceec-----CCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY--SIKISNFGVVRNLYAADYYDL-----GGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~--~~kl~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++  .++++|||+++.+........     ......+..|+|||.+.... ..++|+|++|+.
T Consensus       175 ~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  249 (345)
T 2v62_A          175 GDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYC  249 (345)
T ss_dssp             SCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHH
Confidence            48999999998877  999999999975432211000     01112334699999998765 458999998864

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.14  E-value=1.7e-12  Score=67.95  Aligned_cols=61  Identities=21%  Similarity=0.128  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++.......   ..   ..+..|+|||.+..   .. ..++|+|++|+.
T Consensus       178 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~---~~---~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i  242 (348)
T 1u5q_A          178 RDVKAGNILLSEPGLVKLGDFGSASIMAPAN---SF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  242 (348)
T ss_dssp             CCCSGGGEEEETTTEEEECCCTTCBSSSSBC---CC---CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEeeccCceecCCCC---cc---cCCcceeCHhhhccccCCCCCcHHHHHHHHHH
Confidence            4899999999999999999999987543321   11   12345999999852   33 457899998864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.14  E-value=6.7e-13  Score=69.13  Aligned_cols=64  Identities=17%  Similarity=0.184  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|+.|||.+............   ..+..|+|||.+....+  .++|+|++|+.
T Consensus       154 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  219 (335)
T 3dls_A          154 RDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF---CGTIEYCAPEVLMGNPYRGPELEMWSLGVT  219 (335)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEE---CSCGGGCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred             eccCHHHEEEcCCCcEEEeecccceECCCCCceecc---CCCccccChhhhcCCCCCCCcccchhHHHH
Confidence            489999999999999999999999754433211111   12345999999886553  36799988764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.14  E-value=1.6e-12  Score=67.42  Aligned_cols=65  Identities=17%  Similarity=0.114  Sum_probs=32.5

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++..+   .+++.|||++.........  ......+..|+|||.+.... ...+|+|++|+.
T Consensus       130 ~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i  198 (325)
T 3kn6_A          130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVI  198 (325)
T ss_dssp             CCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHH
T ss_pred             cCCCHHHEEEecCCCcccEEEeccccceecCCCCCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHH
Confidence            48999999997665   8999999999754332211  11112245699999998665 447899988763

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=2.5e-12  Score=67.72  Aligned_cols=62  Identities=19%  Similarity=0.131  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++......   .  ....+..|+|||++.. .. ...+|+|++|+.
T Consensus       152 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~---~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  215 (367)
T 1cm8_A          152 RDLKPGNLAVNEDCELKILDFGLARQADSEM---T--GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  215 (367)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCSSC---C--SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             cCcCHHHEEEcCCCCEEEEeeeccccccccc---C--cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHH
Confidence            4899999999999999999999997643221   1  1122345899999876 33 458999988753

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.14  E-value=1.4e-12  Score=68.88  Aligned_cols=64  Identities=19%  Similarity=0.143  Sum_probs=45.8

Q ss_pred             CCcccceeEE--cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV--HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~--~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||++  +..+.+|++|||++...........   ...+..|+|||.+.... ...+|+|++|+.
T Consensus       211 ~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  277 (373)
T 2x4f_A          211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFVSFPTDMWSVGVI  277 (373)
T ss_dssp             CCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC---CCSSCTTCCHHHHTTCBCCHHHHHHHHHHH
T ss_pred             ccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc---ccCCCcEeChhhccCCCCCcHHhHHHHHHH
Confidence            4899999999  5678999999999976543321111   12234599999987655 347999998864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.14  E-value=1e-12  Score=66.86  Aligned_cols=67  Identities=15%  Similarity=0.174  Sum_probs=46.9

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||++   +..+.+|+.|||.+..........     .......+..|+|||.+.... ..++|+|++|+.
T Consensus       129 ~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  204 (296)
T 4hgt_A          129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV  204 (296)
T ss_dssp             SCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence            4899999999   788999999999987654322110     111112345699999998765 447899998763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.13  E-value=4.4e-12  Score=64.21  Aligned_cols=65  Identities=15%  Similarity=0.149  Sum_probs=32.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  .......|+|||.+.... ..++|+|++|+.
T Consensus       136 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  201 (278)
T 3cok_A          136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGTPNYISPEIATRSAHGLESDVWSLGCM  201 (278)
T ss_dssp             SSCCGGGEEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce--eccCCCCcCCcchhcCCCCCchhhHHHHHHH
Confidence            48999999999999999999999875432211101  111234599999988655 558999988753

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=1.1e-12  Score=66.83  Aligned_cols=67  Identities=22%  Similarity=0.633  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........  .......+..|++||.+.... ..++|+|++|+.
T Consensus       148 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  217 (298)
T 3pls_A          148 RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVL  217 (298)
T ss_dssp             SCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHH
Confidence            4899999999999999999999987543322111  111223345699999998655 447899988753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.13  E-value=1.1e-12  Score=66.85  Aligned_cols=67  Identities=15%  Similarity=0.106  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCe-----EEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS-----IKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~-----~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.     ++++|||.+..........     .......+..|+|||.+.... ..++|+|++|+.
T Consensus       130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  207 (298)
T 1csn_A          130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  207 (298)
T ss_dssp             CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHH
Confidence            489999999977665     9999999987544321110     011112334699999988655 457999988763

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.13  E-value=1.8e-12  Score=68.14  Aligned_cols=64  Identities=16%  Similarity=0.187  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.+   ..+|+.|||++...........   ...+..|+|||++.... ...+|+|++|+.
T Consensus       152 ~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  219 (362)
T 2bdw_A          152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVI  219 (362)
T ss_dssp             CCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCC---SCSCTTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             ccCchHHEEEecCCCCCCEEEeecCcceEecCCccccc---CCCCccccCHHHHccCCCCchhhHHHHHHH
Confidence            4899999999765   4599999999976543321111   12234599999998755 457999998763

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.13  E-value=6.9e-13  Score=67.63  Aligned_cols=67  Identities=22%  Similarity=0.242  Sum_probs=39.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+..   .. ....|+|++|+.
T Consensus       144 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  214 (289)
T 3og7_A          144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV  214 (289)
T ss_dssp             SCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHH
T ss_pred             ccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHH
Confidence            48999999999999999999999865432111111111122345999999862   22 337899988753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.12  E-value=8.5e-13  Score=70.03  Aligned_cols=67  Identities=13%  Similarity=0.032  Sum_probs=42.3

Q ss_pred             CCcccceeEE----cCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV----HAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~----~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||++    +..+.+|++|||++........ ........++..|+|||++....  ...+|+|++|+.
T Consensus       152 ~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  225 (405)
T 3rgf_A          152 RDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  225 (405)
T ss_dssp             CCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             CCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHH
Confidence            4899999999    6778999999999975432210 01111112244599999988643  347899998763

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.12  E-value=1.9e-12  Score=67.87  Aligned_cols=67  Identities=15%  Similarity=0.049  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceec-CCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDL-GGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||.+........... ......+..|+|||.+....  ...+|+|++|+.
T Consensus       152 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHH
T ss_pred             CCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHH
Confidence            48999999999999999999999975443221111 11112234589999876543  457899988763

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.12  E-value=2.3e-12  Score=66.42  Aligned_cols=64  Identities=17%  Similarity=0.144  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........   ....+..|+|||.+.... ...+|+|++|+.
T Consensus       144 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  208 (326)
T 1blx_A          144 RDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRAPEVLLQSSYATPVDLWSVGCI  208 (326)
T ss_dssp             CCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGC---CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             ccCCHHHeEEcCCCCEEEecCcccccccCCCCcc---ccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence            4899999999999999999999987543222111   112234599999988665 557999988763

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.12  E-value=6e-13  Score=67.97  Aligned_cols=67  Identities=19%  Similarity=0.354  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ .........+..|+|||.+.... ..++|+|++|+.
T Consensus       150 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  218 (302)
T 4e5w_A          150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT  218 (302)
T ss_dssp             SCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHH
Confidence            48999999999999999999999876543321 11122222344599999987655 457899988753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.12  E-value=4.9e-12  Score=65.08  Aligned_cols=66  Identities=15%  Similarity=0.106  Sum_probs=40.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .......+..|+|||.+.... ....|+|++|+.
T Consensus       158 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  224 (309)
T 2h34_A          158 RDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCV  224 (309)
T ss_dssp             SCCCGGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHH
T ss_pred             CCCChHHEEEcCCCCEEEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHH
Confidence            489999999999999999999998654332211 111112234599999998665 558999988753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.12  E-value=8.3e-13  Score=67.41  Aligned_cols=67  Identities=25%  Similarity=0.675  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........  .......+..|+|||.+.... ..+.|+|++|+.
T Consensus       152 ~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  221 (298)
T 3f66_A          152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  221 (298)
T ss_dssp             SCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHH
Confidence            4899999999999999999999997554332111  111222344699999987655 447899988753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.12  E-value=1.5e-12  Score=65.93  Aligned_cols=64  Identities=19%  Similarity=0.232  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........   ....+..|+|||.+.... ..++|+|++|+.
T Consensus       146 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  210 (284)
T 2a19_B          146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLI  210 (284)
T ss_dssp             SCCSGGGEEEEETTEEEECCCTTCEESSCCSCCC---CCCSCCTTSCHHHHHCSCCCTHHHHHHHHHH
T ss_pred             ccCCHHHEEEcCCCCEEECcchhheecccccccc---ccCCcccccChhhhccCCCcchhhhHHHHHH
Confidence            4899999999999999999999987554322111   112234599999988665 557999988763

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.11  E-value=1.7e-12  Score=70.54  Aligned_cols=64  Identities=19%  Similarity=0.162  Sum_probs=46.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++...........   ...+..|+|||++.+..+  ..+|+|++|+.
T Consensus       140 rDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi  205 (476)
T 2y94_A          140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVISGRLYAGPEVDIWSSGVI  205 (476)
T ss_dssp             SCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCC---CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred             ccccHHHEEEecCCCeEEEeccchhhccccccccc---cCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence            48999999999999999999999976543321111   122345999999987653  37899998763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=7.5e-13  Score=68.77  Aligned_cols=67  Identities=27%  Similarity=0.354  Sum_probs=42.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.......... .......+..|+|||.+.... ..++|+|++|+.
T Consensus       171 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  239 (333)
T 1mqb_A          171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV  239 (333)
T ss_dssp             SCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             CCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHH
Confidence            4899999999999999999999987644321110 111112234599999988655 447999988763

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.11  E-value=3.6e-12  Score=67.26  Aligned_cols=64  Identities=16%  Similarity=0.106  Sum_probs=45.3

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++ .++.+|++|||.+...........   ...+..|+|||.+.+..  ...+|+|++|+.
T Consensus       165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA---YICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             SCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCC---CCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             CccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcC---cccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            48999999997 578999999999975433321111   11234599999987643  457899988753

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.11  E-value=2.6e-12  Score=66.28  Aligned_cols=64  Identities=11%  Similarity=0.040  Sum_probs=45.0

Q ss_pred             CCcccceeEE----cCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc--------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV----HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK--------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~----~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||++    +..+.+|+.|||.+...........   ...+..|+|||.+..        .. ..++|+|++|+.
T Consensus       136 ~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             SCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCC---CCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             CCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceee---cccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence            4899999998    7778899999999976543321111   122345999998862        23 458999998763

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.11  E-value=1e-11  Score=63.23  Aligned_cols=63  Identities=14%  Similarity=0.053  Sum_probs=45.5

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++ .++.+++.|||.+...........    ..+..|+|||.+......++|+|++|+.
T Consensus       155 ~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~----~~t~~y~aPE~~~~~~~~~~Di~slG~~  218 (290)
T 1t4h_A          155 RDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV----IGTPEFMAPEMYEEKYDESVDVYAFGMC  218 (290)
T ss_dssp             SCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEES----CSSCCCCCGGGGGTCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEECCCCCEEEeeCCCcccccccccccc----cCCcCcCCHHHHhccCCCcchHHHHHHH
Confidence            48999999997 788999999999865433221111    1234599999887554668999988764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.10  E-value=4e-12  Score=65.69  Aligned_cols=64  Identities=22%  Similarity=0.117  Sum_probs=33.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc----cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV----KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~----~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.|||++...........   ......|+|||.+.    ... ..++|+|++|+.
T Consensus       150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  218 (327)
T 3aln_A          150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR---DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT  218 (327)
T ss_dssp             SCCCGGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEccCCCceeccccccccc---CCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence            48999999999999999999999875433221111   11234599999984    222 457899988763

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.10  E-value=9.4e-13  Score=67.03  Aligned_cols=67  Identities=28%  Similarity=0.356  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... ........+..|+|||.+.... ...+|+|++|+.
T Consensus       134 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  202 (287)
T 1u59_A          134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT  202 (287)
T ss_dssp             CCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHH
Confidence            489999999999999999999998765432211 1111122245699999987655 457999988763

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.10  E-value=1e-12  Score=66.52  Aligned_cols=66  Identities=27%  Similarity=0.376  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .......+..|+|||.+.... ..++|+|++|+.
T Consensus       133 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  199 (279)
T 1qpc_A          133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL  199 (279)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH
T ss_pred             cCCCHhhEEEcCCCCEEECCCcccccccCcccc-cccCCCCccCccChhhhccCCCCchhhhHHHHHH
Confidence            489999999999999999999998765433211 111222234599999987655 457899988763

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.10  E-value=8.7e-13  Score=68.23  Aligned_cols=67  Identities=27%  Similarity=0.380  Sum_probs=47.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... ........+..|+|||.+.... ..++|+|++|+.
T Consensus       169 ~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  237 (326)
T 2w1i_A          169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV  237 (326)
T ss_dssp             SCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             cCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHH
Confidence            489999999999999999999998765433211 1111222344599999987655 457899988763

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.10  E-value=9.6e-13  Score=68.22  Aligned_cols=64  Identities=22%  Similarity=0.176  Sum_probs=46.4

Q ss_pred             CCcccceeEEcC--CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA--GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~--~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.  ++.+++.|||++............   ..+..|+|||.+.... ...+|+|++|+.
T Consensus       126 ~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~DiwslG~i  192 (321)
T 1tki_A          126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL---FTAPEYYAPEVHQHDVVSTATDMWSLGTL  192 (321)
T ss_dssp             CCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE---ESCGGGSCHHHHTTCEECHHHHHHHHHHH
T ss_pred             CCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc---cCChhhcCcHHhcCCCCCchhhHHHHHHH
Confidence            489999999987  789999999999765433221111   1233599999998665 458999988763

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.10  E-value=2.5e-12  Score=64.92  Aligned_cols=67  Identities=19%  Similarity=0.131  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|+|||.+.....  .++|+|++|+.
T Consensus       129 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  197 (276)
T 2yex_A          129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  197 (276)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHH
T ss_pred             cCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHH
Confidence            48999999999999999999999875432221111111122345999999876543  36899988753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.10  E-value=1.6e-12  Score=70.73  Aligned_cols=67  Identities=12%  Similarity=0.141  Sum_probs=47.1

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|||+.||++   +..+.+|++|||++..........     .......+..|++||.+.... ..+.|+|++|+.
T Consensus       127 rDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvi  202 (483)
T 3sv0_A          127 RDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYV  202 (483)
T ss_dssp             CCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             cccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHH
Confidence            4899999999   578899999999997654322110     111122345699999998765 447899998864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.10  E-value=4.4e-12  Score=68.65  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=44.3

Q ss_pred             CCcccceeEEc---CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH---AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~---~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++   ..+.+|++|||++...........   ...+..|+|||++......++|+|++|+.
T Consensus       145 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~DiwslG~i  211 (486)
T 3mwu_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIGTAYYIAPEVLRGTYDEKCDVWSAGVI  211 (486)
T ss_dssp             SCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----C---CTTGGGGCCGGGGGSCCCHHHHHHHHHHH
T ss_pred             ccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCC---CcCCCCCCCHHHhCCCCCchhhHHHHHHH
Confidence            48999999995   456799999999975543321111   12234599999998654558999998763

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.09  E-value=8.7e-13  Score=68.09  Aligned_cols=67  Identities=18%  Similarity=0.308  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ .........+..|+|||.+.... ..++|+|++|+.
T Consensus       158 ~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  226 (318)
T 3lxp_A          158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT  226 (318)
T ss_dssp             SCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHH
Confidence            48999999999999999999999976543321 11111222344599999988655 457899988753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.09  E-value=1.3e-12  Score=66.33  Aligned_cols=66  Identities=27%  Similarity=0.459  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........... .....+..|+|||.+.... ..++|+|++|+.
T Consensus       137 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  203 (281)
T 3cc6_A          137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMFAVC  203 (281)
T ss_dssp             CCCSGGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCccceEEECCCCcEEeCccCCCccccccccccc-ccCCCCcceeCchhhccCCCCchhccHHHHHH
Confidence            48999999999999999999999875443321111 1112244599999987655 447899988753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.09  E-value=7.9e-13  Score=67.09  Aligned_cols=66  Identities=24%  Similarity=0.463  Sum_probs=47.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .......+..|+|||.+.... ..+.|+|++|+.
T Consensus       144 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  210 (283)
T 3gen_A          144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL  210 (283)
T ss_dssp             SSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCCEEEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhhHHHHHHH
Confidence            489999999999999999999998754332211 111222244699999988655 447899988753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.09  E-value=8.2e-13  Score=68.30  Aligned_cols=67  Identities=25%  Similarity=0.347  Sum_probs=47.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... ........+..|+|||.+.... ....|+|++|+.
T Consensus       151 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  219 (327)
T 3lxl_A          151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV  219 (327)
T ss_dssp             SCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHH
Confidence            489999999999999999999999765433211 1111222344599999987655 457899988753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.09  E-value=6.3e-13  Score=67.78  Aligned_cols=67  Identities=25%  Similarity=0.387  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........ .........+..|+|||.+.... ..++|+|++|+.
T Consensus       141 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  209 (291)
T 1xbb_A          141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL  209 (291)
T ss_dssp             SCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHH
Confidence            48999999999999999999999875543321 11111122245599999987655 457899988763

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.09  E-value=3.7e-12  Score=65.73  Aligned_cols=67  Identities=15%  Similarity=0.104  Sum_probs=35.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee----------cCCCcccceeEEeccccc---cCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD----------LGGKSALPIRWMAWESIV---KVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~aPe~~~---~~~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.|||.+..........          .......+..|+|||.+.   ... ..++|+|++|+
T Consensus       162 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~  241 (337)
T 3ll6_A          162 RDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC  241 (337)
T ss_dssp             CCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHH
T ss_pred             ccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHH
Confidence            4899999999999999999999987644321100          000112344699999983   222 34789998876


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       242 i  242 (337)
T 3ll6_A          242 I  242 (337)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.09  E-value=4.6e-13  Score=67.60  Aligned_cols=66  Identities=24%  Similarity=0.445  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .......+..|+|||.+.... ..++|+|++|+.
T Consensus       130 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  196 (269)
T 4hcu_A          130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL  196 (269)
T ss_dssp             SCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCcchheEEEcCCCCEEeccccccccccccccc-cccCcccccccCCHHHhcCCCCCchhhhHHHHHH
Confidence            489999999999999999999998754332211 111222244599999988655 457899988753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.09  E-value=2e-12  Score=65.82  Aligned_cols=67  Identities=15%  Similarity=0.164  Sum_probs=46.4

Q ss_pred             CCcccceeEEc---CCCeEEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH---AGYSIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~---~~~~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++   .++.+++.|||.+..........     .......+..|+|||.+.... ..++|+|++|+.
T Consensus       129 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  204 (296)
T 3uzp_A          129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV  204 (296)
T ss_dssp             SCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence            48999999994   78899999999987544322110     011112344599999998765 447999998764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.08  E-value=3.8e-12  Score=66.15  Aligned_cols=65  Identities=15%  Similarity=0.072  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+.... ....|+|++|+.
T Consensus       165 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  230 (335)
T 2owb_A          165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK--VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI  230 (335)
T ss_dssp             SCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC--CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHH
T ss_pred             cCCCchhEEEcCCCCEEEeeccCceecccCccccc--ccCCCccccCHHHhccCCCCchhhHHHHHHH
Confidence            48999999999999999999999875432211111  112234599999988655 458999988764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.08  E-value=2.1e-12  Score=67.60  Aligned_cols=64  Identities=16%  Similarity=0.084  Sum_probs=40.0

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.   ++.+|+.|||++...........   ...+..|+|||.+.... ..++|+|++|+.
T Consensus       172 ~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  239 (349)
T 2w4o_A          172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT---VCGTPGYCAPEILRGCAYGPEVDMWSVGII  239 (349)
T ss_dssp             CCCCGGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             cCCCcccEEEecCCCCCCEEEccCccccccCccccccc---ccCCCCccCHHHhcCCCCCcccchHHHHHH
Confidence            489999999975   78999999999875432211111   11234599999998755 458999998763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.08  E-value=4.6e-12  Score=64.85  Aligned_cols=65  Identities=22%  Similarity=0.187  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .. ....+..|+|||.+.... ...+|+|++|+.
T Consensus       143 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  208 (303)
T 3a7i_A          143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RN-TFVGTPFWMAPEVIKQSAYDSKADIWSLGIT  208 (303)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECBTTBCC-BC-CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             CCCChheEEECCCCCEEEeecccceecCccccc-cC-ccCCCcCccCHHHHhcCCCCchhhhHHHHHH
Confidence            489999999999999999999998754432211 11 111234599999998765 457899988753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.08  E-value=2e-12  Score=67.53  Aligned_cols=67  Identities=9%  Similarity=0.060  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCC--eEEEcccCcccccccCccee-----cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY--SIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~--~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++  .++++|||++..+.......     .......+..|+|||.+.... ..++|+|++|+.
T Consensus       183 ~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  257 (352)
T 2jii_A          183 GNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYC  257 (352)
T ss_dssp             SCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHH
Confidence            48999999999988  89999999997544321100     001112334699999998755 448999998864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.07  E-value=3.7e-12  Score=69.10  Aligned_cols=64  Identities=17%  Similarity=0.095  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++..   +.+|++|||++...........   ...+..|+|||++......++|+|++|+.
T Consensus       160 ~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~---~~gt~~y~aPE~l~~~~~~~~DiwslG~i  226 (494)
T 3lij_A          160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE---RLGTAYYIAPEVLRKKYDEKCDVWSIGVI  226 (494)
T ss_dssp             SCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCC---CCSCTTTCCHHHHTTCBCTHHHHHHHHHH
T ss_pred             ccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccc---cCCCcCeeCHHHHcccCCCchhHHHHHHH
Confidence            4899999999764   5599999999876543321111   12234599999987544668999998863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.07  E-value=3.4e-12  Score=66.14  Aligned_cols=67  Identities=16%  Similarity=0.070  Sum_probs=46.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCCC-------CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVPS-------QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~-------~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++..........  .......+..|+|||.+.....       .++|+|++|+.
T Consensus       171 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i  246 (342)
T 1b6c_B          171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  246 (342)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence            4899999999999999999999987544322110  1111122345999999876431       35899988764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.07  E-value=5.3e-12  Score=63.91  Aligned_cols=64  Identities=9%  Similarity=0.100  Sum_probs=46.1

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+++.||++   +.++.+++.|||.+............   ..+..|+|||.+......++|+|++|+.
T Consensus       130 ~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~---~~t~~y~aPE~~~~~~~~~~Di~slG~~  196 (277)
T 3f3z_A          130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQVLEGLYGPECDEWSAGVM  196 (277)
T ss_dssp             CCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCC---CSCTTTCCHHHHTTCBCTTHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCcEEEEecccceeccCccchhcc---CCCCCccChHHhcccCCchhhehhHHHH
Confidence            4899999999   77889999999998754433211111   1234599999987655668999988753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.07  E-value=6.5e-12  Score=64.52  Aligned_cols=65  Identities=22%  Similarity=0.121  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       149 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  214 (314)
T 3com_A          149 RDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN--TVIGTPFWMAPEVIQEIGYNCVADIWSLGIT  214 (314)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC--CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHH
T ss_pred             CCcCHHHEEECCCCCEEEeecccchhhhhhccccC--ccCCCCCccChhhcCCCCCCccccHHHHHHH
Confidence            48999999999999999999999875433211111  111234599999988765 568999988753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.07  E-value=6.6e-12  Score=63.66  Aligned_cols=63  Identities=14%  Similarity=0.063  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .   ...+..|+|||.+.... ....|+|++|+.
T Consensus       133 ~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~---~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  196 (279)
T 3fdn_A          133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-D---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVL  196 (279)
T ss_dssp             CCCCGGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             ccCChHhEEEcCCCCEEEEeccccccCCccccc-c---cCCCCCccCHhHhccCCCCccchhHhHHHH
Confidence            489999999999999999999988543322211 1   11234599999988665 458999988753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.07  E-value=3.2e-12  Score=66.23  Aligned_cols=65  Identities=18%  Similarity=0.094  Sum_probs=42.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+....  ...+|+|++|+.
T Consensus       148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i  214 (331)
T 4aaa_A          148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD--DEVATRWYRAPELLVGDVKYGKAVDVWAIGCL  214 (331)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred             cCcChheEEEcCCCcEEEEeCCCceeecCCccccC--CCcCCccccCcccccCCCCcchHHHHHHHHHH
Confidence            48999999999999999999999875433211111  112234599999987643  457899988753

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.07  E-value=3.1e-12  Score=67.91  Aligned_cols=64  Identities=16%  Similarity=0.228  Sum_probs=45.5

Q ss_pred             CCcccceeEEcC--CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA--GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~--~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.  .+.+|++|||++............   ..+..|+|||++.... ...+|+|++|+.
T Consensus       173 rDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  239 (387)
T 1kob_A          173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAAPEIVDREPVGFYTDMWAIGVL  239 (387)
T ss_dssp             CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEE---CSSGGGCCHHHHTTCCBCHHHHHHHHHHH
T ss_pred             cccchHHeEEecCCCCceEEEecccceecCCCcceeee---ccCCCccCchhccCCCCCCcccEeeHhHH
Confidence            489999999974  467999999999765433221111   1234599999998655 457899998764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.07  E-value=6.1e-12  Score=64.99  Aligned_cols=64  Identities=9%  Similarity=0.095  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++ .++++|||++............   ..+..|+|||.+.. .. ..++|+|++|+.
T Consensus       154 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~~DiwslG~i  220 (330)
T 3nsz_A          154 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCM  220 (330)
T ss_dssp             CCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSC---CSCGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccc---cccccccChhhhcCCCcCCchhhHHHHHHH
Confidence            48999999999776 8999999999754433211111   12345899999876 33 457899988763

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.07  E-value=5.1e-12  Score=66.45  Aligned_cols=64  Identities=14%  Similarity=0.112  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-------CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-------PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-------~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++...........   ...+..|+|||.+...       ....+|+|++|+.
T Consensus       224 ~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i  294 (365)
T 2y7j_A          224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE---LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI  294 (365)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC---CCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEecCcccccCCCccccc---CCCCCCccChhhccccccccCcCCCchhhHHhHHHH
Confidence            48999999999999999999998875543321111   1223459999998632       2357899988764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.07  E-value=5.9e-12  Score=64.22  Aligned_cols=65  Identities=15%  Similarity=0.063  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+............  ...+..|+|||.+.... ..++|+|++|+.
T Consensus       139 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  204 (294)
T 2rku_A          139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCI  204 (294)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC--CCSCCSSCCHHHHTTSCBCTHHHHHHHHHH
T ss_pred             cCCChHhEEEcCCCCEEEEeccCceecccCcccccc--ccCCCCcCCcchhccCCCCchhhHHHHHHH
Confidence            489999999999999999999998754322111111  11234599999988655 458999988753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.06  E-value=5.9e-12  Score=66.35  Aligned_cols=62  Identities=18%  Similarity=0.087  Sum_probs=38.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++......  .   ....+..|+|||++... . ...+|+|++|+.
T Consensus       156 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  219 (367)
T 2fst_X          156 RDLKPSNLAVNEDCELKILDFGLARHTADEM--T---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  219 (367)
T ss_dssp             CCCCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHH
T ss_pred             CCCCHhhEEECCCCCEEEeeccccccccccC--C---CcCcCcCccChHHHcCCcCCCchhhHHHHHHH
Confidence            4899999999999999999999997543221  0   11123458999998763 3 458999988763

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.06  E-value=2.9e-12  Score=65.74  Aligned_cols=65  Identities=17%  Similarity=0.104  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+.+..  ..++|+|++|+.
T Consensus       126 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  192 (311)
T 4agu_A          126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--DEVATRWYRSPELLVGDTQYGPPVDVWAIGCV  192 (311)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHH
T ss_pred             CCCChhhEEEcCCCCEEEeeCCCchhccCcccccC--CCcCCccccChHHHhcCCCCCcchhhHHHHHH
Confidence            48999999999999999999999976442221111  112234589999987533  457899988753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.06  E-value=6.9e-12  Score=64.78  Aligned_cols=64  Identities=14%  Similarity=0.163  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++    .+++.|||.+..........   ....+..|+|||.+.... ...+|+|++|+.
T Consensus       139 ~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  207 (321)
T 2a2a_A          139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVI  207 (321)
T ss_dssp             CCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCChHHEEEecCCCCcCCEEEccCccceecCcccccc---ccCCCCCccCcccccCCCCCCccccHHHHHH
Confidence            48999999998877    79999999987544322111   112234599999988655 457999988753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.06  E-value=1.1e-12  Score=66.62  Aligned_cols=67  Identities=22%  Similarity=0.324  Sum_probs=45.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... ........+..|+|||.+.... ...+|+|++|+.
T Consensus       145 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (291)
T 1u46_A          145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT  213 (291)
T ss_dssp             SCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHH
Confidence            489999999999999999999998765433211 1111122234599999987655 457899988753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.05  E-value=1.2e-11  Score=62.77  Aligned_cols=63  Identities=13%  Similarity=0.034  Sum_probs=46.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .   ...+..|+|||.+.... ...+|+|++|+.
T Consensus       138 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~---~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  201 (284)
T 2vgo_A          138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-T---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVL  201 (284)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECSSSCBC-C---CCSCGGGCCHHHHTTCCBCTTHHHHHHHHH
T ss_pred             cCCCHHHEEEcCCCCEEEecccccccCcccccc-c---ccCCCCcCCHHHhccCCCCcccchhhHHHH
Confidence            489999999999999999999988654322111 1   11234599999998765 568999988753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.05  E-value=6.6e-12  Score=66.07  Aligned_cols=62  Identities=21%  Similarity=0.140  Sum_probs=42.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.......  .   ....+..|+|||.+.. .. ..++|+|++|+.
T Consensus       168 ~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~--~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (371)
T 4exu_A          168 RDLKPGNLAVNEDCELKILDFGLARHADAEM--T---GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  231 (371)
T ss_dssp             SCCCGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             CCcCHHHeEECCCCCEEEEecCcccccccCc--C---CcccCccccCHHHhcCCCCCCcHHhHHHHHHH
Confidence            4899999999999999999999987543221  1   1112345999999876 33 458999988763

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.05  E-value=6.6e-12  Score=65.15  Aligned_cols=62  Identities=16%  Similarity=0.103  Sum_probs=45.0

Q ss_pred             CCcccceeEE-------------------cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCC
Q psy10556          1 MAESTKNCLV-------------------HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGP   60 (69)
Q Consensus         1 ~dl~~~nil~-------------------~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~   60 (69)
                      .|+|+.||++                   +..+.+++.|||.+.......  .   ....+..|+|||.+.... ...+|
T Consensus       147 ~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~---~~~gt~~y~aPE~~~~~~~~~~~D  221 (355)
T 2eu9_A          147 TDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH--T---TIVATRHYRPPEVILELGWAQPCD  221 (355)
T ss_dssp             CCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC--C---SSCSCGGGCCHHHHTTCCCCTHHH
T ss_pred             CCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccc--c---CCcCCCcccCCeeeecCCCCCccc
Confidence            4899999999                   567889999999987533221  1   112234599999998655 55899


Q ss_pred             ceEEEEe
Q psy10556         61 SQSYRIF   67 (69)
Q Consensus        61 ~w~~~i~   67 (69)
                      +|++|+.
T Consensus       222 i~slG~i  228 (355)
T 2eu9_A          222 VWSIGCI  228 (355)
T ss_dssp             HHHHHHH
T ss_pred             hHHHHHH
Confidence            9988763

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.04  E-value=3.6e-12  Score=66.05  Aligned_cols=64  Identities=20%  Similarity=0.139  Sum_probs=44.3

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.   .+.+++.|||.+...........   ...+..|+|||.+.... ..++|+|++|+.
T Consensus       155 ~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  222 (327)
T 3lm5_A          155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE---IMGTPEYLAPEILNYDPITTATDMWNIGII  222 (327)
T ss_dssp             SCCCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CcCChHHEEEecCCCCCcEEEeeCccccccCCcccccc---ccCCcCccCCeeecCCCCCchhhHHHHHHH
Confidence            489999999987   78999999999976543221111   12234599999998665 458999988764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.04  E-value=8e-12  Score=67.10  Aligned_cols=67  Identities=16%  Similarity=0.132  Sum_probs=41.2

Q ss_pred             CCcccceeEEcC-----CCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccC---C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-----GYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKV---P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-----~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~---~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.     ...++++|||++........ .........+..|+|||++...   . ..++|+|++|+.
T Consensus       142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i  218 (432)
T 3p23_A          142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV  218 (432)
T ss_dssp             CCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence            489999999943     34678999999976543211 1111111234569999999742   2 347899998863

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.03  E-value=6.1e-12  Score=66.41  Aligned_cols=67  Identities=12%  Similarity=0.098  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-----ecCCCcccceeEEeccccccC--C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-----DLGGKSALPIRWMAWESIVKV--P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~--~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+++.|||.+.........     ........+..|+|||++...  . ..++|+|++|+.
T Consensus       152 rDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i  226 (389)
T 3gni_B          152 RSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT  226 (389)
T ss_dssp             CCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHH
Confidence            489999999999999999999987543211100     001111223459999999863  3 457899998763

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.03  E-value=9.3e-12  Score=64.20  Aligned_cols=62  Identities=19%  Similarity=0.083  Sum_probs=44.8

Q ss_pred             CCcccceeEEcC-------------------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCC
Q psy10556          1 MAESTKNCLVHA-------------------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGP   60 (69)
Q Consensus         1 ~dl~~~nil~~~-------------------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~   60 (69)
                      .|+|+.||+++.                   ++.+++.|||.+.......  ..   ...+..|+|||.+.... ...+|
T Consensus       142 ~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~---~~gt~~y~aPE~~~~~~~~~~~D  216 (339)
T 1z57_A          142 TDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH--ST---LVSTRHYRAPEVILALGWSQPCD  216 (339)
T ss_dssp             CCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC--CS---SCSCGGGCCHHHHTTSCCCTHHH
T ss_pred             CCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccc--cc---ccCCccccChHHhhCCCCCcchh
Confidence            489999999987                   5679999999987533221  11   12234599999998755 56899


Q ss_pred             ceEEEEe
Q psy10556         61 SQSYRIF   67 (69)
Q Consensus        61 ~w~~~i~   67 (69)
                      +|++|+.
T Consensus       217 i~slG~i  223 (339)
T 1z57_A          217 VWSIGCI  223 (339)
T ss_dssp             HHHHHHH
T ss_pred             hHHHHHH
Confidence            9988753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.03  E-value=5.9e-12  Score=65.36  Aligned_cols=67  Identities=18%  Similarity=0.180  Sum_probs=43.7

Q ss_pred             CCcccceeEEcCCC--eEEEcccCcccccccCcc--eecCCCcccceeEEecccccc--CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY--SIKISNFGVVRNLYAADY--YDLGGKSALPIRWMAWESIVK--VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~--~~kl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aPe~~~~--~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++  .+++.|||.+..+.....  .........+..|+|||.+..  .. ..++|+|++|+.
T Consensus       192 ~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i  265 (345)
T 3hko_A          192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL  265 (345)
T ss_dssp             CCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred             cCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence            48999999998766  899999999875432110  001111122345999999874  22 457999998764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.03  E-value=5.3e-12  Score=65.98  Aligned_cols=64  Identities=16%  Similarity=0.011  Sum_probs=40.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.++++|||.+...........   ...+..|+|||.+.. .. ...+|+|++|+.
T Consensus       158 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  223 (362)
T 3pg1_A          158 RDLHPGNILLADNNDITICDFNLAREDTADANKTH---YVTHRWYRAPELVMQFKGFTKLVDMWSAGCV  223 (362)
T ss_dssp             CCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred             cCCChHHEEEcCCCCEEEEecCcccccccccccce---ecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence            48999999999999999999999974332221111   112344899999875 33 457899988764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.03  E-value=8.2e-12  Score=63.33  Aligned_cols=64  Identities=16%  Similarity=0.182  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCCCe---EEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS---IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~---~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.   +++.|||.+...........   ...+..|+|||.+.... ..+.|+|++|+.
T Consensus       129 ~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  196 (284)
T 3kk8_A          129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLSPEVLKKDPYSKPVDIWACGVI  196 (284)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCC---SCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccC---CCCCcCCcCchhhcCCCCCcccchHHHHHH
Confidence            489999999976544   99999999865443321111   12234599999998765 457999988753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.02  E-value=3.2e-12  Score=66.27  Aligned_cols=65  Identities=15%  Similarity=0.086  Sum_probs=41.6

Q ss_pred             CCcccceeEEc-----CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-----AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-----~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++     ....+|+.|||.+........  .......+..|+|||++....  ...+|+|++|+.
T Consensus       156 ~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  227 (329)
T 3gbz_A          156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACI  227 (329)
T ss_dssp             SCCCGGGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCccceEEECcCCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHH
Confidence            48999999994     455699999999875432211  111112234599999987643  457899998763

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.02  E-value=4.4e-12  Score=64.60  Aligned_cols=64  Identities=19%  Similarity=0.096  Sum_probs=42.3

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+++.||++   +..+.+++.|||.+...........   ...+..|+|||.+......++|+|++|+.
T Consensus       148 ~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~Di~slG~i  214 (285)
T 3is5_A          148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGTALYMAPEVFKRDVTFKCDIWSAGVV  214 (285)
T ss_dssp             CCCSGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHTTCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcC---cccccCcCChHHhccCCCcccCeehHHHH
Confidence            4899999999   4567899999999975433221111   12234599999987544568999988753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.02  E-value=5.3e-12  Score=66.38  Aligned_cols=48  Identities=10%  Similarity=0.072  Sum_probs=33.0

Q ss_pred             eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556         15 SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus        15 ~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .+++.|||.+.......  .   ....+..|+|||++.... ...+|+|++|+.
T Consensus       234 ~~kl~DfG~a~~~~~~~--~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  282 (397)
T 1wak_A          234 KVKIADLGNACWVHKHF--T---EDIQTRQYRSLEVLIGSGYNTPADIWSTACM  282 (397)
T ss_dssp             CEEECCGGGCEETTBCS--C---SCCSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred             ceEeccccccccccccC--c---cCCCCCcccCChhhcCCCCCcHHHHHHHHHH
Confidence            79999999987543221  1   111234599999998765 457999998763

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.02  E-value=2.7e-12  Score=69.37  Aligned_cols=64  Identities=16%  Similarity=0.112  Sum_probs=45.6

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||++   +.++.+|++|||++............   ..+..|+|||++......++|+|++|+.
T Consensus       150 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~DiwslG~i  216 (484)
T 3nyv_A          150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPEVLHGTYDEKCDVWSTGVI  216 (484)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHH---TTGGGTCCHHHHHTCCCTHHHHHHHHHH
T ss_pred             CCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccC---CCCccccCceeecCCCCCcceeHHHHHH
Confidence            4899999999   46788999999998754433211111   1234599999987654668999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.02  E-value=1.2e-12  Score=67.70  Aligned_cols=67  Identities=31%  Similarity=0.683  Sum_probs=44.0

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.   ...+++.|||.+.................+..|+|||.+.... ...+|+|++|+.
T Consensus       164 ~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  234 (327)
T 2yfx_A          164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  234 (327)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHH
Confidence            489999999984   4569999999886543222111111122244699999987655 458999988763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.02  E-value=1.4e-11  Score=64.30  Aligned_cols=62  Identities=21%  Similarity=0.140  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.......  .   ....+..|+|||.+.. .. ...+|+|++|+.
T Consensus       150 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~---~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i  213 (353)
T 3coi_A          150 RDLKPGNLAVNEDCELKILDFGLARHADAEM--T---GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  213 (353)
T ss_dssp             SSCCGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             CCCCHHHEeECCCCcEEEeecccccCCCCCc--c---ccccCcCcCCHHHHhCcCCCCchhhHHHHHHH
Confidence            4899999999999999999999987543221  1   1112345999999876 23 457899988763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.02  E-value=2.9e-12  Score=65.12  Aligned_cols=66  Identities=24%  Similarity=0.450  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+............ ....+..|+|||.+.... ...+|+|++|+.
T Consensus       135 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  201 (288)
T 3kfa_A          135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNKFSIKSDVWAFGVL  201 (288)
T ss_dssp             SCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET-TEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCCEEEccCccceeccCCcccccc-CCccccCcCChhhhccCCCCchhhHHHHHHH
Confidence            489999999999999999999999765433221111 122234599999988655 447899988753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.01  E-value=9.9e-12  Score=67.60  Aligned_cols=64  Identities=17%  Similarity=0.089  Sum_probs=45.5

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++   .+|++|||++...........   ...+..|+|||++......++|+|++|+.
T Consensus       170 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~DiwslG~i  236 (504)
T 3q5i_A          170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD---RLGTAYYIAPEVLKKKYNEKCDVWSCGVI  236 (504)
T ss_dssp             SCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCC---CCSCTTTCCHHHHTTCBCTHHHHHHHHHH
T ss_pred             CCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCcccc---ccCCcCCCCHHHhccCCCchHHHHHHHHH
Confidence            48999999998765   699999999976543321111   11234599999987544668999998764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.01  E-value=1.4e-12  Score=65.57  Aligned_cols=66  Identities=24%  Similarity=0.445  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+......... .......+..|+|||.+.... ...+|+|++|+.
T Consensus       128 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  194 (267)
T 3t9t_A          128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL  194 (267)
T ss_dssp             SSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCCchheEEECCCCCEEEccccccccccccccc-ccccccccccccChhhhcCCCccchhchhhhHHH
Confidence            489999999999999999999998754332211 111122244599999988655 457899988753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.01  E-value=5.9e-12  Score=67.52  Aligned_cols=67  Identities=19%  Similarity=0.147  Sum_probs=42.5

Q ss_pred             CCcccceeEEcCC-------------CeEEEcccCcccccccCcce-e-cCCCcccceeEEecccccc-------CC-CC
Q psy10556          1 MAESTKNCLVHAG-------------YSIKISNFGVVRNLYAADYY-D-LGGKSALPIRWMAWESIVK-------VP-SQ   57 (69)
Q Consensus         1 ~dl~~~nil~~~~-------------~~~kl~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~aPe~~~~-------~~-~~   57 (69)
                      .|+|+.||+++..             ..++++|||++......... . .......+..|+|||++..       .. ..
T Consensus       139 rDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  218 (434)
T 2rio_A          139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTR  218 (434)
T ss_dssp             CCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCT
T ss_pred             cCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcch
Confidence            4899999999754             48999999999765432110 0 1111123446999999865       22 45


Q ss_pred             CCCceEEEEe
Q psy10556         58 DGPSQSYRIF   67 (69)
Q Consensus        58 ~~~~w~~~i~   67 (69)
                      .+|+|++|+.
T Consensus       219 ~~DiwSlG~i  228 (434)
T 2rio_A          219 SIDIFSMGCV  228 (434)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhhhHhHHHH
Confidence            7999998864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.01  E-value=4.8e-12  Score=65.86  Aligned_cols=67  Identities=15%  Similarity=0.091  Sum_probs=44.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--------cCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--------LGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........        .......+..|+|||.+... . ...+|+|++|+.
T Consensus       136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  212 (353)
T 2b9h_A          136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI  212 (353)
T ss_dssp             SCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHH
T ss_pred             CCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHH
Confidence            4899999999999999999999987543221100        00011223459999987643 3 347899988763

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.00  E-value=4e-12  Score=66.43  Aligned_cols=63  Identities=21%  Similarity=0.161  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........    ..+..|+|||.+.... ...+|+|++|+.
T Consensus       156 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~~Di~slG~i  219 (360)
T 3eqc_A          156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQGTHYSVQSDIWSMGLS  219 (360)
T ss_dssp             SCCSGGGEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred             CCccHHHEEECCCCCEEEEECCCCcccccccccCC----CCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence            48999999999999999999998864322211111    1234599999998765 447899988753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.00  E-value=1.1e-11  Score=63.79  Aligned_cols=62  Identities=24%  Similarity=0.241  Sum_probs=40.7

Q ss_pred             CCcccceeEEcCCCe-EEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS-IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~-~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++. +|+.|||.+........  .   ...+..|+|||.+.... ..++|+|++|+.
T Consensus       129 ~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~--~---~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  192 (307)
T 2eva_A          129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT--N---NKGSAAWMAPEVFEGSNYSEKCDVFSWGII  192 (307)
T ss_dssp             CCCSGGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHH
T ss_pred             CCCChhHEEEeCCCCEEEEcccccccccccccc--c---CCCCCceEChhhhCCCCCCcHHHHHHHHHH
Confidence            489999999988775 79999999865432211  1   11234599999998755 458999998764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.00  E-value=7e-12  Score=65.59  Aligned_cols=62  Identities=16%  Similarity=0.089  Sum_probs=44.1

Q ss_pred             CCcccceeEEc------CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH------AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~------~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++      ....++++|||++.......  .   ....+..|+|||.+.... ..++|+|++|+.
T Consensus       156 ~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~---~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  224 (373)
T 1q8y_A          156 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY--T---NSIQTREYRSPEVLLGAPWGCGADIWSTACL  224 (373)
T ss_dssp             SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC--C---SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHH
T ss_pred             cCCChHHeEEeccCCCcCcceEEEcccccccccCCCC--C---CCCCCccccCcHHHhCCCCCchHhHHHHHHH
Confidence            48999999994      34489999999987543221  1   112234599999998765 557999988763

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.00  E-value=5.5e-12  Score=64.73  Aligned_cols=65  Identities=14%  Similarity=0.042  Sum_probs=39.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  .......|+|||.+.... ...+|+|++|+.
T Consensus       160 ~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  225 (310)
T 2wqm_A          160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH--SLVGTPYYMSPERIHENGYNFKSDIWSLGCL  225 (310)
T ss_dssp             CCCCGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCCcHHHEEEcCCCCEEEEeccceeeecCCCcccc--ccCCCeeEeChHHhCCCCCCchhhHHHHHHH
Confidence            48999999999999999999999875432211111  111234599999988655 447899988753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.99  E-value=8.2e-12  Score=63.87  Aligned_cols=67  Identities=19%  Similarity=0.040  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.................+..|++||.+....   ..++|+|++|+.
T Consensus       133 ~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  202 (305)
T 2wtk_C          133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT  202 (305)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred             cCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence            4899999999999999999999987543211101111111234599999987533   236899988753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.99  E-value=1.1e-11  Score=63.87  Aligned_cols=65  Identities=22%  Similarity=0.133  Sum_probs=41.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........  .......+..|+|||.+..     .. ..++|+|++|+.
T Consensus       153 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  223 (326)
T 2x7f_A          153 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT  223 (326)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHH
T ss_pred             cCCcHHHEEEcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHH
Confidence            48999999999999999999999875432211  0111112345999999862     22 457899988763

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.99  E-value=1.6e-12  Score=67.21  Aligned_cols=64  Identities=30%  Similarity=0.435  Sum_probs=44.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++.......   .......+..|+|||.+.... ...+|+|++|+.
T Consensus       166 ~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  230 (327)
T 1fvr_A          166 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  230 (327)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHH
Confidence            4899999999999999999999986432111   111112234599999987655 457899988763

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.98  E-value=7.3e-12  Score=64.40  Aligned_cols=66  Identities=15%  Similarity=0.160  Sum_probs=40.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----------C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----------P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----------~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++. +.+|+.|||.+.................+..|+|||.+...           . ..++|+|++|+.
T Consensus       151 ~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~i  228 (313)
T 3cek_A          151 SDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI  228 (313)
T ss_dssp             CCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHH
T ss_pred             cCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHH
Confidence            489999999964 88999999998754332211111111223459999998751           2 346899988763

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.98  E-value=9.7e-12  Score=69.67  Aligned_cols=60  Identities=12%  Similarity=0.050  Sum_probs=44.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.+ .+|++|||++.......   .   ...+..|++||.+......++|+|++|+.
T Consensus       206 rDlkp~NIll~~~-~~kl~DFG~a~~~~~~~---~---~~gt~~y~aPE~~~~~~~~~sDi~slG~~  265 (681)
T 2pzi_A          206 NDLKPENIMLTEE-QLKLIDLGAVSRINSFG---Y---LYGTPGFQAPEIVRTGPTVATDIYTVGRT  265 (681)
T ss_dssp             CCCSGGGEEECSS-CEEECCCTTCEETTCCS---C---CCCCTTTSCTTHHHHCSCHHHHHHHHHHH
T ss_pred             cccChHHeEEeCC-cEEEEecccchhcccCC---c---cCCCccccCHHHHcCCCCCceehhhhHHH
Confidence            4899999999875 88999999987543321   1   11234599999988665568999998863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.98  E-value=5.5e-12  Score=66.30  Aligned_cols=64  Identities=14%  Similarity=0.124  Sum_probs=39.7

Q ss_pred             CCcccceeEEcCCCe--EEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CC-CCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS--IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QD-GPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~--~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~-~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.  +|++|||+++.........   ....+..|+|||++....+ .. +|+|++|+.
T Consensus       140 ~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  207 (361)
T 3uc3_A          140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLRQEYDGKIADVWSCGVT  207 (361)
T ss_dssp             CCCCGGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCceEEEeecCccccccccCCCC---CCcCCCCcCChhhhcCCCCCCCeeeeehhHHH
Confidence            489999999987664  9999999986432221111   1122345999999886553 33 799988753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.97  E-value=3.3e-11  Score=60.91  Aligned_cols=64  Identities=19%  Similarity=0.176  Sum_probs=42.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........   ....+..|+|||.+.....  .++|+|++|+.
T Consensus       135 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  200 (276)
T 2h6d_A          135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI  200 (276)
T ss_dssp             CCCCGGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             CCCChhhEEECCCCCEEEeecccccccCCCccee---cccCCccccCHHHHcCCCCCCccchHHHHHHH
Confidence            4899999999999999999999987644322111   1122345999999886543  47899988753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.97  E-value=8.6e-12  Score=64.49  Aligned_cols=63  Identities=17%  Similarity=0.033  Sum_probs=45.0

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      .|+++.||+++ .++.+|+.|||.+......... .   ...+..|+|||.+.....  ..+|+|++|+.
T Consensus       173 ~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~-~---~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  238 (320)
T 3a99_A          173 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYT-D---FDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL  238 (320)
T ss_dssp             CCCSGGGEEEETTTTEEEECCCTTCEECCSSCBC-C---CCSCGGGSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEeCCCCCEEEeeCcccccccccccc-C---CCCCccCCChHHhccCCCCCccchHHhHHHH
Confidence            48999999999 6789999999998765432211 1   112345999999876553  36799988763

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.96  E-value=7.1e-12  Score=63.66  Aligned_cols=64  Identities=25%  Similarity=0.160  Sum_probs=37.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc----cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV----KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~----~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+............   ..+..|+|||.+.    ... ...+|+|++|+.
T Consensus       134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  202 (290)
T 3fme_A          134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERINPELNQKGYSVKSDIWSLGIT  202 (290)
T ss_dssp             CCCSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEeecCCccccccccccccc---CCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence            489999999999999999999998754332211111   1234599999973    222 347899988753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.95  E-value=1.6e-11  Score=65.62  Aligned_cols=64  Identities=19%  Similarity=0.169  Sum_probs=40.5

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++..   ..+|+.|||++...........   ...+..|+|||.+..   .. ..++|+|++|+.
T Consensus       263 rDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i  333 (419)
T 3i6u_A          263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI  333 (419)
T ss_dssp             SCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHH
T ss_pred             cCCChHhEEEecCCCcceEEEeecccceecCCCccccc---cCCCCCccCceeeecCCCCCCCchhhhHhHHHH
Confidence            4899999999754   4599999999976543221111   122345999999863   22 247899998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.95  E-value=8.9e-12  Score=63.15  Aligned_cols=62  Identities=24%  Similarity=0.419  Sum_probs=41.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+........     ....+..|+|||.+.... ...+|+|++|+.
T Consensus       141 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  203 (278)
T 1byg_A          141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGIL  203 (278)
T ss_dssp             SCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cCCCcceEEEeCCCcEEEeecccccccccccc-----CCCccccccCHHHhCCCCCCchhcHHHHHHH
Confidence            48999999999999999999998875432211     111234599999987655 457899988753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.95  E-value=3.7e-12  Score=67.55  Aligned_cols=64  Identities=11%  Similarity=0.051  Sum_probs=44.6

Q ss_pred             CCcccceeEE----cCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc--------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV----HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK--------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~----~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--------~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||++    +..+.+|++|||.+..........   ....+..|+|||.+..        .. ...+|+|++|+.
T Consensus       136 ~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV---SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             CCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSS---CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             CCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccc---cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence            4899999999    777889999999997654332111   1122445999998864        12 346899988764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.95  E-value=1.8e-11  Score=62.05  Aligned_cols=64  Identities=16%  Similarity=0.176  Sum_probs=43.7

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++    .+++.|||.+............   ..+..|+|||.+.... ..++|+|++|+.
T Consensus       132 ~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~Di~slG~i  200 (283)
T 3bhy_A          132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI---FGTPEFVAPEIVNYEPLGLEADMWSIGVI  200 (283)
T ss_dssp             SCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             CCCChHHEEEecCCCCCCceEEEecccceeccCCCccccc---CCCcCccCcceecCCCCCcchhhhhHHHH
Confidence            48999999998776    8999999998754332211111   1234599999988655 457999988753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.94  E-value=2e-11  Score=62.20  Aligned_cols=67  Identities=16%  Similarity=0.120  Sum_probs=43.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc------------eecCCCcccceeEEeccccccC-C-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY------------YDLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.+++.|||.+........            .........+..|+|||.+... . ...+|+|++|+
T Consensus       140 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  219 (303)
T 1zy4_A          140 RDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI  219 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHH
T ss_pred             ccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHH
Confidence            48999999999999999999999875432100            0000111223458999998754 2 45799998876


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       220 i  220 (303)
T 1zy4_A          220 I  220 (303)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.94  E-value=2.7e-11  Score=62.95  Aligned_cols=63  Identities=19%  Similarity=0.125  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-CC-C-CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-PS-Q-DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-~~-~-~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+....... . ..  ...+..|+|||.+... .+ . .+|+|++|+.
T Consensus       176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~-~~--~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  241 (348)
T 2pml_X          176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKK-I-KG--SRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC  241 (348)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECBTTE-E-CS--SCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHH
T ss_pred             cCCChHhEEEcCCCcEEEecccccccccccc-c-cC--CCCCcCccCchhhcCCCCCCcchhhHHHHHHH
Confidence            4899999999999999999999987543321 1 11  1223459999999876 32 3 7899988763

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.93  E-value=1.7e-11  Score=62.97  Aligned_cols=64  Identities=25%  Similarity=0.150  Sum_probs=39.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc-----CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........   ...+..|+|||.+..     .. ..++|+|++|+.
T Consensus       149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  218 (318)
T 2dyl_A          149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR---SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS  218 (318)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEECCCchhccCCccccc---cCCCccccChhhcccccccccCCccccchhhHHHH
Confidence            48999999999999999999999865433221111   112345999999852     22 347899988763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.92  E-value=4.2e-11  Score=60.86  Aligned_cols=62  Identities=16%  Similarity=0.208  Sum_probs=42.7

Q ss_pred             CCcccceeEEcCCCe-----EEEcccCcccccccCcceecCCCcccceeEEeccccccC--C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS-----IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV--P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~-----~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++..+.     +++.|||.+.......  ...   ..+..|+|||.+...  . ..++|+|++|+.
T Consensus       148 ~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~---~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~  217 (287)
T 4f0f_A          148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV--SGL---LGNFQWMAPETIGAEEESYTEKADTYSFAMI  217 (287)
T ss_dssp             SCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCE--ECC---CCCCTTSCGGGSSCSSCEECHHHHHHHHHHH
T ss_pred             CCCCcceEEEeccCCCCceeEEeCCCCccccccccc--ccc---CCCccccCchhhccCCCCcCchhhHHHHHHH
Confidence            489999999987665     9999999987533221  111   123459999998432  2 347899988763

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.92  E-value=2.4e-11  Score=62.25  Aligned_cols=63  Identities=17%  Similarity=0.138  Sum_probs=44.6

Q ss_pred             CCcccceeEE---cCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLV---HAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~---~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||++   +.++.+++.|||.+......... .   ...+..|+|||.+.... ...+|+|++|+.
T Consensus       130 ~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~---~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  196 (304)
T 2jam_A          130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS-T---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI  196 (304)
T ss_dssp             CSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH-H---HHSCCCBCCTTTBSSCSCCHHHHHHHHHHH
T ss_pred             cCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc-c---ccCCCCccChHHhccCCCCchhhHHHHHHH
Confidence            4899999999   67889999999998643322110 0   11234599999998665 447999988753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.92  E-value=1.4e-11  Score=62.16  Aligned_cols=63  Identities=25%  Similarity=0.306  Sum_probs=40.2

Q ss_pred             CCcccceeEEcC--------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA--------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~--------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.        ++.+++.|||.+...........    ..+..|+|||.+.... ..+.|+|++|+.
T Consensus       132 ~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~~  203 (271)
T 3dtc_A          132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA----AGAYAWMAPEVIRASMFSKGSDVWSYGVL  203 (271)
T ss_dssp             SCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             cCCchHHEEEecccccccccCcceEEccCCcccccccccccCC----CCccceeCHHHhccCCCCchhhHHHHHHH
Confidence            489999999985        67899999999875433221111    1234599999988665 457899988753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.91  E-value=8.5e-12  Score=65.26  Aligned_cols=65  Identities=18%  Similarity=0.180  Sum_probs=43.5

Q ss_pred             CCcccceeEEcCC----CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG----YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~----~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||++...    ..+|++|||++...........  ....+..|+|||++.... ...+|+|++|+.
T Consensus       140 rDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  209 (342)
T 2qr7_A          140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM--TPCYTANFVAPEVLERQGYDAACDIWSLGVL  209 (342)
T ss_dssp             SCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBC--CSSCCSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCcee--ccCCCccccCHHHhcCCCCCCccCeeeHhHH
Confidence            4899999998543    3599999999875433221111  112234599999987644 457899988763

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.91  E-value=2e-11  Score=63.54  Aligned_cols=63  Identities=13%  Similarity=0.131  Sum_probs=32.2

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.   .+.+++.|||.+.........    ....+..|+|||.+.... ...+|+|++|+.
T Consensus       152 ~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  218 (336)
T 3fhr_A          152 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ----TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI  218 (336)
T ss_dssp             SCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEEecCCCceEEEeccccceeccccccc----cCCCCcCccChhhhCCCCCCchhhHHHHHHH
Confidence            489999999976   456999999998754322111    112234599999987554 457899988753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.91  E-value=7.3e-12  Score=63.65  Aligned_cols=61  Identities=21%  Similarity=0.207  Sum_probs=43.7

Q ss_pred             CCcccceeEEcCCCe--------EEEcccCcccccccCcceecCCCcccceeEEecccccc-CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYS--------IKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK-VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~--------~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.        +++.|||.+..........      ....|+|||.+.. .. ..++|+|++|+.
T Consensus       137 ~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~y~aPE~~~~~~~~~~~~DiwslG~i  207 (289)
T 4fvq_A          137 GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ------ERIPWVPPECIENPKNLNLATDKWSFGTT  207 (289)
T ss_dssp             CCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHH------HTTTTSCHHHHHCGGGCCHHHHHHHHHHH
T ss_pred             CCcCcceEEEecCCcccccccceeeeccCcccccccCccccC------CcCcccCHHHhCCCCCCCchhHHHHHHHH
Confidence            489999999988876        9999999986543322111      1234999999886 33 447899998763

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.90  E-value=1.8e-10  Score=64.95  Aligned_cols=64  Identities=14%  Similarity=0.158  Sum_probs=45.8

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++   .++++|||.+..........   ....+..|+|||.+.+.. ...+|+|++|+.
T Consensus       145 rDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIwSLGvi  212 (676)
T 3qa8_A          145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT---EFVGTLQYLAPELLEQKKYTVTVDYWSFGTL  212 (676)
T ss_dssp             CCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCC---CCCSCCTTCSSCSSCCSCCSTTHHHHHHHHH
T ss_pred             CCCCHHHeEeecCCCceeEEEcccccccccccccccc---cccCCcccCChHHhccCCCCchhHHHHHHHH
Confidence            48999999998655   48999999997654332111   112345699999998665 568999998764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.89  E-value=2.5e-12  Score=65.12  Aligned_cols=65  Identities=14%  Similarity=0.183  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........  ....+..|+|||.+.... ...+|+|++|+.
T Consensus       140 ~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  205 (279)
T 2w5a_A          140 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL  205 (279)
T ss_dssp             CCCSGGGEEECSSSCEEECCCCHHHHC---CHHHH--HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHH
T ss_pred             eccchhhEEEcCCCCEEEecCchheeecccccccc--ccCCCccccChHHhccCCCCchhhHHHHHHH
Confidence            48999999999999999999999875432211000  001134599999988655 447899988763

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.89  E-value=2.2e-11  Score=62.02  Aligned_cols=65  Identities=23%  Similarity=0.202  Sum_probs=44.2

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      .|+++.||+++. ++.+++.|||.+...........  ....+..|+|||.+....   ....|+|++|+.
T Consensus       146 ~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  214 (295)
T 2clq_A          146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT  214 (295)
T ss_dssp             CCCSGGGEEEETTTCCEEECCTTTCEESCC-----C--CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHH
T ss_pred             cCCChhhEEEECCCCCEEEeecccccccCCCCCccc--ccCCCccccChhhhcCCCCCCCcHHHHHHHHHH
Confidence            489999999987 88999999999875433211111  112234599999987542   347899988763

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.89  E-value=5.1e-11  Score=60.78  Aligned_cols=64  Identities=17%  Similarity=0.131  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc------CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK------VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~------~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+...........   ...+..|+|||.+..      .. ..++|+|++|+.
T Consensus       148 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~  218 (298)
T 1phk_A          148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI  218 (298)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCC---CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHH
T ss_pred             CCCCcceEEEcCCCcEEEecccchhhcCCCccccc---ccCCccccCHHHhccccccccccCCcccccHhHHHH
Confidence            48999999999999999999999875443221111   112345999998852      22 357899988753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.88  E-value=3.5e-11  Score=61.73  Aligned_cols=67  Identities=9%  Similarity=0.043  Sum_probs=42.7

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccC-C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKV-P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~-~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++ .++.+|+.|||.+......... ........+..|+|||.+... . ..++|+|++|+.
T Consensus       144 ~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  214 (320)
T 2i6l_A          144 RDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  214 (320)
T ss_dssp             CCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHH
Confidence            48999999997 4679999999998754322111 111111223458999988653 3 347899988763

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.87  E-value=4.8e-11  Score=61.31  Aligned_cols=63  Identities=17%  Similarity=0.037  Sum_probs=45.1

Q ss_pred             CCcccceeEEc-CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-C-CCCceEEEEe
Q psy10556          1 MAESTKNCLVH-AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-Q-DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~-~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~-~~~~w~~~i~   67 (69)
                      .|+++.||+++ .++.+++.|||.+......... .   ......|+|||.+..... . .+|+|++|+.
T Consensus       163 ~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~-~---~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  228 (312)
T 2iwi_A          163 RDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT-D---FDGTRVYSPPEWISRHQYHALPATVWSLGIL  228 (312)
T ss_dssp             CCCSGGGEEEETTTTEEEECCCSSCEECCSSCBC-C---CCSCTTTSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred             cCCChhhEEEeCCCCeEEEEEcchhhhcccCccc-c---cCCcccccCceeeecCCCCCccchHHHHHHH
Confidence            48999999999 7899999999998765433211 1   112345999999876553 2 6899988753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.86  E-value=8.7e-11  Score=59.43  Aligned_cols=61  Identities=15%  Similarity=0.137  Sum_probs=42.9

Q ss_pred             CCcccceeEEcC-------------------CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-C-CCC
Q psy10556          1 MAESTKNCLVHA-------------------GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-S-QDG   59 (69)
Q Consensus         1 ~dl~~~nil~~~-------------------~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~-~~~   59 (69)
                      .|+++.||+++.                   ...+++.|||.+........  .    ..+..|+|||.+.... . .++
T Consensus       139 ~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~----~gt~~y~aPE~~~~~~~~~~~~  212 (289)
T 1x8b_A          139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV--E----EGDSRFLANEVLQENYTHLPKA  212 (289)
T ss_dssp             SCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCC--C----CCCGGGCCHHHHTTCCTTHHHH
T ss_pred             cCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccc--c----CCCccccChhHhcCCCCCCchh
Confidence            489999999984                   44789999999875443221  1    1234599999998653 2 479


Q ss_pred             CceEEEEe
Q psy10556         60 PSQSYRIF   67 (69)
Q Consensus        60 ~~w~~~i~   67 (69)
                      |+|++|+.
T Consensus       213 Di~slG~i  220 (289)
T 1x8b_A          213 DIFALALT  220 (289)
T ss_dssp             HHHHHHHH
T ss_pred             hHHHHHHH
Confidence            99998763

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.85  E-value=3.1e-11  Score=62.06  Aligned_cols=67  Identities=13%  Similarity=0.028  Sum_probs=41.2

Q ss_pred             CCcccceeEEcCCCe---EEEcccCcccccccCccee-----cCCCcccceeEEecccccc-----CC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYS---IKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVK-----VP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~---~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~-----~~-~~~~~~w~~~i   66 (69)
                      .|+++.||+++.++.   +|+.|||++..........     .......+..|+|||.+..     .. ..++|+|++|+
T Consensus       135 ~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~  214 (316)
T 2ac3_A          135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV  214 (316)
T ss_dssp             CCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHH
T ss_pred             CCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHH
Confidence            489999999987765   9999999986543211000     0001112345999999864     22 46899998876


Q ss_pred             e
Q psy10556         67 F   67 (69)
Q Consensus        67 ~   67 (69)
                      .
T Consensus       215 i  215 (316)
T 2ac3_A          215 I  215 (316)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.82  E-value=7e-11  Score=60.14  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=44.3

Q ss_pred             CCcccceeEEcCC---CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG---YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~---~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.+   ..+++.|||.+........   ......+..|+|||.+......++|+|++|+.
T Consensus       145 ~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~  211 (287)
T 2wei_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVI  211 (287)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHH
T ss_pred             cCCChhhEEEecCCCcccEEEeccCcceeecCCCc---cccccCcccccChHHhcCCCCCchhhHhHHHH
Confidence            4899999999754   4799999999875433211   11112234599999987654668899988753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.81  E-value=2e-11  Score=62.39  Aligned_cols=65  Identities=20%  Similarity=0.152  Sum_probs=42.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccc-----cCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIV-----KVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~-----~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||++...........  ....+..|+|||.+.     ... ...+|+|++|+.
T Consensus       141 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  211 (302)
T 2j7t_A          141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT  211 (302)
T ss_dssp             CCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHH
T ss_pred             CCCCHHHEEECCCCCEEEEECCCCccccccccccc--cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHH
Confidence            48999999999999999999998753221110001  111234599999984     222 457899988763

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.79  E-value=3.2e-11  Score=61.54  Aligned_cols=67  Identities=21%  Similarity=0.154  Sum_probs=43.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---ecCCCcccceeEEecccccc-C-CCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---DLGGKSALPIRWMAWESIVK-V-PSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~-~-~~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+.........   ........+..|+|||.+.. . ....+|+|++|+.
T Consensus       145 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  216 (303)
T 2vwi_A          145 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT  216 (303)
T ss_dssp             CCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHH
T ss_pred             CCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHH
Confidence            489999999999999999999988654322100   00011122345999999864 2 2557899988753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.78  E-value=4.9e-11  Score=61.58  Aligned_cols=64  Identities=19%  Similarity=0.145  Sum_probs=42.8

Q ss_pred             CCcccceeEEcCCC---eEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY---SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~---~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++   .+++.|||.+............   ..+..|+|||.+..   .. ...+|+|++|+.
T Consensus       138 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  208 (322)
T 2ycf_A          138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL---CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI  208 (322)
T ss_dssp             CCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHH---HSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHH
T ss_pred             cCCCHHHEEEecCCCCCeEEEccCccceecccccccccc---cCCcCccCchhhccCCCCCCCchhhHHHHHHH
Confidence            48999999998765   4999999998764332211110   11345999999742   22 457899988763

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.78  E-value=1.2e-10  Score=58.53  Aligned_cols=60  Identities=17%  Similarity=0.277  Sum_probs=42.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-C---CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-Q---DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~---~~~~w~~~i~   67 (69)
                      .|+++.||+++.++..++.+++++.......       ...+..|+|||.+..... .   ++|+|++|+.
T Consensus       137 ~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~-------~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~i  200 (271)
T 3kmu_A          137 HALNSRSVMIDEDMTARISMADVKFSFQSPG-------RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL  200 (271)
T ss_dssp             CCCSGGGEEECTTSCEEEEGGGSCCTTSCTT-------CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred             CCCccceEEEcCCcceeEEeccceeeecccC-------ccCCccccChhhhccCCCCCCCchhhHHHHHHH
Confidence            4899999999999999998887764322211       112345999999986542 2   4899998764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.73  E-value=8.8e-11  Score=60.38  Aligned_cols=67  Identities=10%  Similarity=-0.077  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-------cCCCcccceeEEeccccccCC----CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-------LGGKSALPIRWMAWESIVKVP----SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aPe~~~~~~----~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+++.|||.+..........       .......+..|+|||.+....    ..++|+|++|+.
T Consensus       158 ~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  235 (317)
T 2buj_A          158 RDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV  235 (317)
T ss_dssp             CCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence            4899999999999999999999876432110000       000001134599999987432    457899988763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.66  E-value=2.9e-10  Score=58.44  Aligned_cols=66  Identities=17%  Similarity=0.063  Sum_probs=38.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---ecCCCcccceeEEeccccccC---------C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---DLGGKSALPIRWMAWESIVKV---------P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~---------~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++ ++.+++.|||.+.........   ...........|+|||.+...         . ..++|+|++|+.
T Consensus       154 ~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~i  232 (319)
T 2y4i_B          154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI  232 (319)
T ss_dssp             CCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHH
T ss_pred             cCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHH
Confidence            48999999998 678999999987643211100   001111123458999998741         1 336899988753

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.08  E-value=8.4e-08  Score=53.09  Aligned_cols=61  Identities=10%  Similarity=-0.093  Sum_probs=38.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-----cCCCcccceeEEeccccccC--CC-CCCCceE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-----LGGKSALPIRWMAWESIVKV--PS-QDGPSQS   63 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPe~~~~~--~~-~~~~~w~   63 (69)
                      .|+|+.||+++.  .+|++|||+++.........     .......+..|||||++...  .+ ...|.|+
T Consensus       455 rDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws  523 (540)
T 3en9_A          455 NDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWE  523 (540)
T ss_dssp             TTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHH
T ss_pred             CCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHH
Confidence            489999999998  99999999998654321110     00011123458999998752  12 2455663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.64  E-value=5.2e-05  Score=38.98  Aligned_cols=26  Identities=27%  Similarity=0.129  Sum_probs=23.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|+||.||+++ ++.++++|||++...
T Consensus       217 rDlkp~NILl~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          217 GDLSQYNVLVS-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             SCCSTTSEEEE-TTEEEECCCTTCEET
T ss_pred             CCCCHHHEEEE-CCcEEEEECCCCeEC
Confidence            48999999999 999999999999743

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.12  E-value=0.00046  Score=34.97  Aligned_cols=25  Identities=16%  Similarity=0.134  Sum_probs=22.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNL   27 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~   27 (69)
                      .|++|.||+++.  .++++|||++...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            489999999988  8999999998754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.01  E-value=0.00059  Score=34.98  Aligned_cols=28  Identities=18%  Similarity=0.318  Sum_probs=24.0

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~   28 (69)
                      .|+++.||+++.   ++.+++.|||++....
T Consensus       141 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  171 (299)
T 3m2w_A          141 RDVKPENLLYTSKRPNAILKLTDFGFAKETT  171 (299)
T ss_dssp             CCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred             CCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence            489999999998   7889999999986543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=94.41  E-value=0.037  Score=28.39  Aligned_cols=23  Identities=4%  Similarity=-0.023  Sum_probs=19.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGV   23 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~   23 (69)
                      .|+|+.||+++.++.+++.+.+.
T Consensus       153 ~Dikp~NIll~~~g~~kl~~~~~  175 (286)
T 3uqc_A          153 SIDHPSRVRVSIDGDVVLAYPAT  175 (286)
T ss_dssp             CCCSGGGEEEETTSCEEECSCCC
T ss_pred             CCCCcccEEEcCCCCEEEEeccc
Confidence            48999999999999999875543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=93.20  E-value=0.069  Score=26.50  Aligned_cols=25  Identities=16%  Similarity=0.133  Sum_probs=20.8

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.|++++......+.||+.+..
T Consensus       190 Dl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          190 DACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             SCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CCCCCcEEEECCcEEEEEcchhccc
Confidence            7899999998776677999998754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=88.89  E-value=0.36  Score=24.18  Aligned_cols=25  Identities=16%  Similarity=0.171  Sum_probs=20.2

Q ss_pred             CcccceeEEcCCCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~~~kl~~~~~~~~   26 (69)
                      |+++.|++++....+.+.||+.+..
T Consensus       189 Dl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          189 DLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCCcCcEEEECCcEEEEEEchhccc
Confidence            7899999998766667999987653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=86.84  E-value=0.29  Score=26.92  Aligned_cols=24  Identities=17%  Similarity=0.023  Sum_probs=18.9

Q ss_pred             CCcccceeEEcCCC----------eEEEcccCcc
Q psy10556          1 MAESTKNCLVHAGY----------SIKISNFGVV   24 (69)
Q Consensus         1 ~dl~~~nil~~~~~----------~~kl~~~~~~   24 (69)
                      .|+|+.|||++.++          .+.++||+-+
T Consensus       229 rDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~  262 (397)
T 4gyi_A          229 GDFNEFNILIREEKDAEDPSSITLTPIIIXFPQM  262 (397)
T ss_dssp             SCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTC
T ss_pred             CCCCHHHEEEeCCCCcccccccccceEEEEeCCc
Confidence            48999999998765          3678888754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=83.46  E-value=1.1  Score=23.68  Aligned_cols=25  Identities=8%  Similarity=0.118  Sum_probs=20.0

Q ss_pred             CcccceeEEcCCC--eEEEcccCcccc
Q psy10556          2 AESTKNCLVHAGY--SIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~~~--~~kl~~~~~~~~   26 (69)
                      |+++.|++++.++  .+.+.||+.+..
T Consensus       222 D~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          222 DYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             SCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CCCCCcEEEeCCCCcEEEEECcccccc
Confidence            7889999998764  368999987753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=82.43  E-value=1.1  Score=23.12  Aligned_cols=25  Identities=20%  Similarity=0.155  Sum_probs=20.5

Q ss_pred             CcccceeEEcC--CCeEEEcccCcccc
Q psy10556          2 AESTKNCLVHA--GYSIKISNFGVVRN   26 (69)
Q Consensus         2 dl~~~nil~~~--~~~~kl~~~~~~~~   26 (69)
                      |+.+.|++++.  ...+.+.||+.+..
T Consensus       197 D~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          197 DFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             CCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             CCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            78899999987  55678999987754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	69
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	0.003

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 6e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +T+NCLV     +KI++FG+ RN+Y+ADYY   G  A+PIRWM  ESI
Sbjct: 167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI 214

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-05
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 4   STKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           + +N L+     +KI +FG+ R++Y    Y   G + LP++WMA E+I
Sbjct: 161 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 208

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 2e-05
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N  +H   ++KI +FG+              + +  I WMA E I
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 4e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +N LV     +KI++FG+ + L A +         +PI+WMA ESI
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 9e-05
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           +NC+V   +++KI +FG+ R++Y  DYY  GGK  LP+RWM+ ES+
Sbjct: 162 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 207

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 7   NCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
           N LV  G  +KI +FG+ R++ +   Y + G + LP++WMA ES+
Sbjct: 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 238

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 6e-04
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 6   KNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWE 49
           +NCLV+    +K+S+FG+ R +   +Y    G S  P+RW   E
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-SKFPVRWSPPE 171

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (72), Expect = 0.003
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 5   TKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESI 51
             N LV      K+++FG+ R +   +Y    G +  PI+W A E+ 
Sbjct: 141 AANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAA 186

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	69
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.66
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.66
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.63
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.62
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.61
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.6
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.6
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.6
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.59
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.59
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.59
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.58
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.57
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.57
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.56
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.56
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.55
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.55
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.53
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.53
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.51
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.51
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.5
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.49
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.49
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.48
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.48
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.47
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.47
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.46
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.46
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.45
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.45
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.44
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.43
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.41
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.38
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.38
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.38
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.38
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.37
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.33
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.33
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.32
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.3
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.29
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.29
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.29
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.27
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.26
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.25
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.23
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.16
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.15
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.12
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.09
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.08
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.87
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.53

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.9e-19  Score=91.60  Aligned_cols=67  Identities=31%  Similarity=0.561  Sum_probs=50.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||+++................+..|||||++..+. ..++|+||+|+.
T Consensus       188 RDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvi  255 (325)
T d1rjba_         188 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL  255 (325)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHH
Confidence            5999999999999999999999997654433222222223355799999998766 447999999874

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.6e-19  Score=90.76  Aligned_cols=67  Identities=27%  Similarity=0.507  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||+++...............++..|+|||++.+.. ..++|+||+|+.
T Consensus       158 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvi  225 (299)
T d1ywna1         158 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  225 (299)
T ss_dssp             SCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHH
Confidence            5899999999999999999999997544332111222223456799999998776 458999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=7.2e-19  Score=88.61  Aligned_cols=67  Identities=22%  Similarity=0.237  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC---C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV---P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~-~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||+++...............+++.|||||++...   . ..++|+|||||.
T Consensus       128 rDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~  198 (276)
T d1uwha_         128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV  198 (276)
T ss_dssp             SCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHH
T ss_pred             cccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHH
Confidence            589999999999999999999999765432211111122335569999998643   2 236899999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1e-18  Score=88.22  Aligned_cols=67  Identities=27%  Similarity=0.354  Sum_probs=44.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.|||++.++.+|++|||+++......... ......++..|+|||.+..+. ..++|+||||+.
T Consensus       134 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvi  202 (283)
T d1mqba_         134 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV  202 (283)
T ss_dssp             SCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             CccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHH
Confidence            5899999999999999999999997654322111 111223356799999998766 458999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.2e-18  Score=86.57  Aligned_cols=66  Identities=27%  Similarity=0.376  Sum_probs=50.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|++||+++.++.+|++|||+++........ .......+..|+|||++..+. ..++|+||||+.
T Consensus       133 rDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvv  199 (272)
T d1qpca_         133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL  199 (272)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CccchhheeeecccceeeccccceEEccCCccc-cccccCCcccccChHHHhCCCCCchhhhhhhHHH
Confidence            489999999999999999999999865443322 222223345699999998766 458999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.2e-18  Score=89.08  Aligned_cols=67  Identities=28%  Similarity=0.409  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++...............++..|+|||.+..+.+ .++|+||||+.
T Consensus       135 rDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvi  202 (317)
T d1xkka_         135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT  202 (317)
T ss_dssp             SCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHH
Confidence            58999999999999999999999976543322111112233557999999987764 48999999874

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4e-18  Score=85.75  Aligned_cols=67  Identities=19%  Similarity=0.122  Sum_probs=48.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-C-CCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-Q-DGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~-~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||++................++..|+|||++....+ . .+|+||+|+.
T Consensus       127 rDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi  195 (271)
T d1nvra_         127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  195 (271)
T ss_dssp             SCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred             CcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence            58999999999999999999999986543321111112223456999999987653 3 5899998863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.7e-18  Score=86.66  Aligned_cols=66  Identities=24%  Similarity=0.445  Sum_probs=42.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++........ .......+..|+|||++.... ..++|+||||+.
T Consensus       125 rDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvi  191 (263)
T d1sm2a_         125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL  191 (263)
T ss_dssp             TTCSGGGEEECGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             cccchhheeecCCCCeEecccchheeccCCCce-eecceecCcccCChHHhcCCCCCchhhhcchHHH
Confidence            489999999999999999999999765433211 111223355699999998766 447999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-18  Score=86.51  Aligned_cols=67  Identities=28%  Similarity=0.356  Sum_probs=50.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||+++.+...... ........+..|+|||++..+. ..++|+||||+.
T Consensus       133 rDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~  201 (285)
T d1u59a_         133 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT  201 (285)
T ss_dssp             CCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             CcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHH
Confidence            589999999999999999999999865443221 1222234456799999998766 458999999874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.8e-18  Score=86.45  Aligned_cols=67  Identities=25%  Similarity=0.387  Sum_probs=49.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||+++....... ........+|.+|+|||.+.... ..++|+||||+.
T Consensus       131 rDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~  199 (277)
T d1xbba_         131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL  199 (277)
T ss_dssp             SCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhh
Confidence            58999999999999999999999976543321 12222233466799999998766 458999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=4.2e-18  Score=86.55  Aligned_cols=67  Identities=28%  Similarity=0.345  Sum_probs=41.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce---ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY---DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||+++.+......   ........|..|+|||.+..+. ..++|+||||+.
T Consensus       152 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvv  222 (299)
T d1jpaa_         152 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV  222 (299)
T ss_dssp             SCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             CccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHH
Confidence            589999999999999999999999765432211   1111223456799999998766 447999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=6.5e-18  Score=85.54  Aligned_cols=67  Identities=12%  Similarity=0.140  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||+++.+.............++..|+|||++.+.. ..++|+||+|+.
T Consensus       132 rDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvi  199 (288)
T d1uu3a_         132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI  199 (288)
T ss_dssp             SCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHH
Confidence            5899999999999999999999997654322111111112344699999998766 347999998864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.3e-17  Score=83.73  Aligned_cols=65  Identities=18%  Similarity=0.189  Sum_probs=48.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||++..+........  ...++..|+|||++.+.. ...+|+||+|+.
T Consensus       140 rDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~--~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  205 (293)
T d1yhwa1         140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM  205 (293)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC--CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHH
T ss_pred             cCCcHHHeEECCCCcEeeccchhheeecccccccc--ccccCCCccChhhhcCCCCCchhceehHhHH
Confidence            58999999999999999999999986543321111  112234599999998766 468999998864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=2.5e-18  Score=87.30  Aligned_cols=67  Identities=40%  Similarity=0.737  Sum_probs=48.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|++||+++.++.+|++|||+++...............++..|+|||.+....+ .++|+||||+.
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvv  231 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV  231 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhh
Confidence            48999999999999999999999975543322212112223456999999987664 48999999874

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.6e-17  Score=81.95  Aligned_cols=63  Identities=14%  Similarity=0.072  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||++.......... .   .++..|+|||++.+.. ..++|+||+|+.
T Consensus       130 rDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~-~---~Gt~~Y~APE~~~~~~~~~~~DiwSlGvi  193 (263)
T d2j4za1         130 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-L---CGTLDYLPPEMIEGRMHDEKVDLWSLGVL  193 (263)
T ss_dssp             CCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEE-T---TEEGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             eeeccccceecCCCCEeecccceeeecCCCcccc-c---CCCCcccCHHHHcCCCCCchhhhhhHhHH
Confidence            5899999999999999999999997654332211 1   2244599999999766 458999998863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.9e-17  Score=82.81  Aligned_cols=65  Identities=12%  Similarity=0.054  Sum_probs=48.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||+++........  .....++..|+|||++.+.. ...+|+||+|+.
T Consensus       129 RDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~--~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvi  194 (337)
T d1o6la_         129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV  194 (337)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHH
T ss_pred             cccCHHHeEecCCCCEEEeecccccccccCCcc--cccceeCHHHhhhhhccCCCCChhhcccchhhH
Confidence            589999999999999999999999764432211  11122334599999998766 468999998864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=1e-17  Score=84.75  Aligned_cols=66  Identities=24%  Similarity=0.450  Sum_probs=49.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||+++........... ....+..|+|||++.++. ..++|+||+|+.
T Consensus       139 rDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~  205 (287)
T d1opja_         139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNKFSIKSDVWAFGVL  205 (287)
T ss_dssp             SCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEET-TEEECGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             CccccCeEEECCCCcEEEccccceeecCCCCceeec-cccccccccChHHHcCCCCCchhhhhhHHHH
Confidence            589999999999999999999999865433222221 222344699999998766 448999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.5e-17  Score=84.27  Aligned_cols=63  Identities=21%  Similarity=0.135  Sum_probs=47.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||+||+++.++.+|++|||++..........    ..++..|+|||++.+.. ..++|+||+|+.
T Consensus       129 RDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~----~~GT~~Y~APEvl~~~~y~~~~DiWSlGvi  192 (322)
T d1s9ja_         129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----FVGTRSYMSPERLQGTHYSVQSDIWSMGLS  192 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-------CCSSCCCCHHHHHCSCCCTTHHHHHHHHH
T ss_pred             cccCHHHeeECCCCCEEEeeCCCccccCCCcccc----ccCCccccCchHHcCCCCCcHHHHHHHHHH
Confidence            5899999999999999999999997543322111    12234599999999866 468999998863

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.8e-16  Score=79.65  Aligned_cols=63  Identities=14%  Similarity=0.027  Sum_probs=46.2

Q ss_pred             CCcccceeEEcC-CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCCCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPSQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~w~~~i~   67 (69)
                      +|+||.||+++. ++.+|++|||+++......... .   .++..|+|||++.+....++|+||+|+.
T Consensus       138 rDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~-~---~GT~~Y~aPE~~~~~~~~~~DIwSlGvi  201 (270)
T d1t4ha_         138 RDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA-V---IGTPEFMAPEMYEEKYDESVDVYAFGMC  201 (270)
T ss_dssp             SCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEE-S---CSSCCCCCGGGGGTCCCTHHHHHHHHHH
T ss_pred             CCcChhhceeeCCCCCEEEeecCcceeccCCccCC-c---ccCccccCHHHhCCCCCCcCchhhHHHH
Confidence            589999999964 7899999999997543322211 1   1234599999987654668999998863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=9.9e-18  Score=84.19  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=44.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||.||+++.++.+|++|||+++..........  ....+..|+|||++.... ..++|+||+|+.
T Consensus       138 rDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~--~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvi  203 (269)
T d2java1         138 RDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL  203 (269)
T ss_dssp             --CCGGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CcCchhhcCcCCCCcEEEeeccceeecccCCCccc--cCCCCcccCCHHHHcCCCCChHHHHHhhCHH
Confidence            48999999999999999999999976543321111  112234599999998766 458999998863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.53  E-value=1.9e-16  Score=80.95  Aligned_cols=62  Identities=21%  Similarity=0.250  Sum_probs=47.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||++........  .   ..++..|+|||++.+.. ..++|+||+|+.
T Consensus       128 rDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~--~---~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvi  190 (316)
T d1fota_         128 RDLKPENILLDKNGHIKITDFGFAKYVPDVTY--T---LCGTPDYIAPEVVSTKPYNKSIDWWSFGIL  190 (316)
T ss_dssp             CCCCGGGEEECTTSCEEECCCSSCEECSSCBC--C---CCSCTTTCCHHHHTTCCBCTTHHHHHHHHH
T ss_pred             cccCchheeEcCCCCEEEecCccceEeccccc--c---ccCcccccCHHHHcCCCCCchhhccccchh
Confidence            58999999999999999999999976543321  1   11234599999998766 458999998864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=7.2e-17  Score=80.63  Aligned_cols=66  Identities=24%  Similarity=0.463  Sum_probs=50.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|++|||+++........ .......+..|+|||.+.... ..++|+||||+.
T Consensus       124 ~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~  190 (258)
T d1k2pa_         124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL  190 (258)
T ss_dssp             SCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ccccceeEEEcCCCcEEECcchhheeccCCCce-eecccCCCCCcCCcHHhcCCCCCcceeecccchh
Confidence            489999999999999999999999765443322 222233456799999998766 448999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.8e-16  Score=81.96  Aligned_cols=62  Identities=13%  Similarity=0.123  Sum_probs=47.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||+++.......     ...+...|+|||++.+.. ..++|+|++|+.
T Consensus       165 RDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~-----~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvi  227 (350)
T d1rdqe_         165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----TLCGTPEALAPEIILSKGYNKAVDWWALGVL  227 (350)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECSSCBC-----CCEECGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             CcCCHHHcccCCCCCEEeeeceeeeecccccc-----cccCccccCCHHHHcCCCCCccccccchhHH
Confidence            58999999999999999999999976543221     112234599999998766 457899998864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=9.3e-17  Score=81.78  Aligned_cols=67  Identities=34%  Similarity=0.711  Sum_probs=50.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|+.|||++.++.+|++|||+++...............++..|+|||.+..+.+ .++|+|+||+.
T Consensus       157 rDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~i  224 (308)
T d1p4oa_         157 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  224 (308)
T ss_dssp             SCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHH
Confidence            48999999999999999999999986544332222222234567999999987764 47899999853

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.7e-17  Score=82.68  Aligned_cols=66  Identities=23%  Similarity=0.348  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++........ .......+..|+|||.+..+. ..++|+||||+.
T Consensus       137 ~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Gii  203 (285)
T d1fmka3         137 RDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL  203 (285)
T ss_dssp             SCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ccccceEEEECCCCcEEEcccchhhhccCCCce-eeccccccccccChHHHhCCCCCcHHhhhcchHH
Confidence            489999999999999999999999765433211 111223356699999998766 458999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.4e-17  Score=81.43  Aligned_cols=66  Identities=29%  Similarity=0.483  Sum_probs=40.5

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++.+...... ......++..|+|||.+.... ..++|+||+|+.
T Consensus       132 rDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvi  198 (273)
T d1mp8a_         132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVC  198 (273)
T ss_dssp             SCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHH
T ss_pred             cccchhheeecCCCcEEEccchhheeccCCcce-eccceecCcccchhhHhccCCCCCccccccchHH
Confidence            489999999999999999999999765433211 111223456799999998766 447999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.49  E-value=4.4e-16  Score=80.86  Aligned_cols=63  Identities=17%  Similarity=0.090  Sum_probs=47.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||++..+......    ...++..|+|||++..+.  ..++|+||+|+.
T Consensus       131 rDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~----~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvi  195 (364)
T d1omwa3         131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM  195 (364)
T ss_dssp             CCCSGGGEEECSSSCEEECCCTTCEECSSSCCC----SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH
T ss_pred             eeeccceeEEcCCCcEEEeeeceeeecCCCccc----ccccccccchhHHhhcCCCCCcccchhHHHHH
Confidence            589999999999999999999999765433211    112234599999997543  357899998864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=5.1e-16  Score=79.17  Aligned_cols=61  Identities=21%  Similarity=0.141  Sum_probs=45.6

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEecccccc---CC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVK---VP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~---~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||++.......   .   ..++..|+|||++..   +. ..++|+||+|+.
T Consensus       139 rDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~---~---~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvi  203 (309)
T d1u5ra_         139 RDVKAGNILLSEPGLVKLGDFGSASIMAPAN---S---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT  203 (309)
T ss_dssp             CCCSGGGEEEETTTEEEECCCTTCBSSSSBC---C---CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHH
T ss_pred             cCCCcceEEECCCCCEEEeecccccccCCCC---c---cccCccccCHHHHhccCCCCcCchhhhhhHHHH
Confidence            5899999999999999999999997543321   1   122345999999864   22 347999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.3e-16  Score=80.71  Aligned_cols=65  Identities=22%  Similarity=0.126  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccC-----C-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKV-----P-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~-----~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|++|||++......... .. ...++..|+|||++...     . ..++|+||+|+.
T Consensus       134 rDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~-~~-~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvi  204 (288)
T d2jfla1         134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RD-SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT  204 (288)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCEECHHHHHH-HT-CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHH
T ss_pred             eecChhheeECCCCCEEEEechhhhccCCCccc-cc-ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHH
Confidence            589999999999999999999998654322111 11 11223459999998532     2 346899998863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.5e-16  Score=78.79  Aligned_cols=65  Identities=11%  Similarity=0.086  Sum_probs=47.0

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-C-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-S-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~-~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||.+......... .. ....+..|+|||++.... + .++|+||+|+.
T Consensus       124 rDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~-~~-~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi  190 (299)
T d1ua2a_         124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA-YT-HQVVTRWYRAPELLFGARMYGVGVDMWAVGCI  190 (299)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC-CC-CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHH
T ss_pred             ccCCcceEEecCCCccccccCccccccCCCccc-cc-ceecChhhccHHHHccCCCCChhhhhhhcchH
Confidence            589999999999999999999999765433211 11 112234599999987554 3 47899998864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.4e-16  Score=79.75  Aligned_cols=67  Identities=33%  Similarity=0.567  Sum_probs=50.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|++||+++..+.++++|||.++...............++..|+|||.+.... ..++|+||||+.
T Consensus       169 rDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~  236 (311)
T d1t46a_         169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF  236 (311)
T ss_dssp             SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHH
Confidence            5899999999999999999999998654332222222334456799999998766 458999999863

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.6e-16  Score=79.91  Aligned_cols=67  Identities=22%  Similarity=0.325  Sum_probs=48.2

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee-cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD-LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++......... ......+|..|+|||.+.... ...+|+||||+.
T Consensus       135 rDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvi  203 (273)
T d1u46a_         135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT  203 (273)
T ss_dssp             SCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             eeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHH
Confidence            4899999999999999999999998654332111 111223456799999998766 447999999863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.6e-16  Score=79.28  Aligned_cols=66  Identities=27%  Similarity=0.516  Sum_probs=48.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i   66 (69)
                      .|+|+.||+++.++.+|+.+||++.................+..|+|||.+..+.+ .++|+|+||+
T Consensus       159 rDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gv  225 (299)
T d1fgka_         159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV  225 (299)
T ss_dssp             SCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             eeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHH
Confidence            58999999999999999999999976543321111112223456999999987764 4899999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-15  Score=77.31  Aligned_cols=64  Identities=17%  Similarity=0.144  Sum_probs=47.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||+||+++..+..|+.|||.+..........   ...++..|+|||++.... ..++|+||+|+.
T Consensus       140 rDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~---~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~i  204 (305)
T d1blxa_         140 RDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWYRAPEVLLQSSYATPVDLWSVGCI  204 (305)
T ss_dssp             CCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGC---CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             cCCCccEEEEcCCCCeeecchhhhhhhcccccCC---CcccChhhcCcchhcCCCCChhehhhchHHH
Confidence            5899999999999999999999987543322111   112244599999998766 468999998863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6e-16  Score=78.94  Aligned_cols=67  Identities=22%  Similarity=0.609  Sum_probs=49.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++.........  .......+..|+|||.+..+. ..++|+||||+.
T Consensus       154 rDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv  223 (311)
T d1r0pa_         154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  223 (311)
T ss_dssp             SCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHH
Confidence            4899999999999999999999997654332111  111223456699999988766 458999999864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.4e-16  Score=79.15  Aligned_cols=67  Identities=18%  Similarity=0.093  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-e-cCCCcccceeEEeccccccCC-------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-D-LGGKSALPIRWMAWESIVKVP-------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||++......... . .......+..|+|||.+....       ..++|+|+||+.
T Consensus       132 rDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvv  207 (303)
T d1vjya_         132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  207 (303)
T ss_dssp             SCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHH
Confidence            489999999999999999999998765433211 1 111112345699999987532       125799999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.5e-15  Score=76.92  Aligned_cols=65  Identities=17%  Similarity=0.137  Sum_probs=48.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|++|||++............  ..++..|+|||++.+.. ..++|+||+|+.
T Consensus       127 rDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  192 (320)
T d1xjda_         127 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPEILLGQKYNHSVDWWSFGVL  192 (320)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC--CCSCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             ccCcccceeecCCCceeccccchhhhcccccccccc--cCCCCCcCCHHHHcCCCCCchhhhhhhhHH
Confidence            589999999999999999999999754432211111  12234599999999766 558999998864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.41  E-value=1.3e-15  Score=77.55  Aligned_cols=64  Identities=19%  Similarity=0.151  Sum_probs=38.8

Q ss_pred             CCcccceeEEc---CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH---AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~---~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||.||++.   .++.+|++|||++...........   ..++..|+|||++.+.. ..++|+||+|+.
T Consensus       131 rDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~---~~GT~~y~APE~~~~~~~~~~~DiwSlGvi  198 (307)
T d1a06a_         131 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI  198 (307)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             EEecccceeecccCCCceEEEeccceeEEccCCCeeee---eeeCccccCcHHHcCCCCCcHHHhhhhhHH
Confidence            58999999995   468899999999975443321111   12234599999998766 568999998864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=8.5e-15  Score=75.29  Aligned_cols=64  Identities=13%  Similarity=0.143  Sum_probs=46.3

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.   .+.+|++|||+++.........   ...++..|+|||++.... ..++|+||+|+.
T Consensus       135 RDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvi  202 (335)
T d2ozaa1         135 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT---TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVI  202 (335)
T ss_dssp             CCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCC---CCSCCCSSCCCCCCCGGGGSHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccceeeeccCCCccc---cccCCcccCCcHHHcCCCCCHHHHHHhhchh
Confidence            589999999975   4679999999997654332111   112244699999998765 458999998863

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.38  E-value=3.7e-15  Score=77.09  Aligned_cols=64  Identities=16%  Similarity=0.214  Sum_probs=47.0

Q ss_pred             CCcccceeEEc--CCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVH--AGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~--~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++  ..+.+|++|||++.............   ....|+|||++.... ..++|+|++|+.
T Consensus       151 RDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~DiwSlGvi  217 (352)
T d1koba_         151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVL  217 (352)
T ss_dssp             CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEEC---SSGGGCCHHHHTTCCBCHHHHHHHHHHH
T ss_pred             cccccccccccccCCCeEEEeecccceecCCCCceeecc---CcccccCHHHHcCCCCCCccchHHHHHH
Confidence            58999999997  56899999999998654433222211   123599999998766 458999998864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.38  E-value=2.7e-15  Score=77.55  Aligned_cols=64  Identities=14%  Similarity=0.130  Sum_probs=46.4

Q ss_pred             CCcccceeEEcC--CCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA--GYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~--~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|++||+++.  ++.+|++|||++..+..........   ++..|+|||++.+..+ ..+|+||+|+.
T Consensus       148 rDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~---gT~~Y~aPEv~~~~~~~~~~DiwSlGvi  214 (350)
T d1koaa2         148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVL  214 (350)
T ss_dssp             CCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEEC---SCTTTCCHHHHHTCCBCHHHHHHHHHHH
T ss_pred             eeechhHeeeccCCCCeEEEeecchheecccccccceec---CcccccCHHHHcCCCCChhHhhhhhhHH
Confidence            589999999964  5789999999997654433222111   2345999999987664 47999998863

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.3e-15  Score=74.27  Aligned_cols=64  Identities=16%  Similarity=0.165  Sum_probs=46.6

Q ss_pred             CCcccceeEEcCCC----eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY----SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~----~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++    .+|++|||++...........   ...+..|+|||++.+.. ..++|+||+|+.
T Consensus       137 rDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~---~~~t~~y~APE~~~~~~~~~~~DiwSlGvi  205 (293)
T d1jksa_         137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVNYEPLGLEADMWSIGVI  205 (293)
T ss_dssp             CCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSC---CCCCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred             cccccceEEEecCCCcccceEecchhhhhhcCCCccccc---cCCCCcccCHHHHcCCCCCCcccchhhhHH
Confidence            58999999998765    589999999976543321111   12234599999998765 568999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.7e-14  Score=74.22  Aligned_cols=67  Identities=15%  Similarity=0.081  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcce-ecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYY-DLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+|+.|||++......... ........+..|+|||++....  ..++|+|++|+.
T Consensus       133 RDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~i  202 (345)
T d1pmea_         133 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI  202 (345)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHH
T ss_pred             CCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCce
Confidence            589999999999999999999998754332211 1111222344599999986544  346899998863

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.4e-15  Score=77.42  Aligned_cols=64  Identities=30%  Similarity=0.417  Sum_probs=47.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+|+.||+++.++.+|++|||+++......   ......++..|+|||.+..+.+ .++|+||||+.
T Consensus       151 rDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvi  215 (309)
T d1fvra_         151 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  215 (309)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             cccccceEEEcCCCceEEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHH
Confidence            4899999999999999999999997543221   1111123456999999987764 58999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.1e-14  Score=73.65  Aligned_cols=65  Identities=17%  Similarity=0.145  Sum_probs=46.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+||+||+++.++.+|++|||.++.......  ......++..|+|||.+....  ...+|+||+|+.
T Consensus       126 rDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvi  192 (298)
T d1gz8a_         126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI  192 (298)
T ss_dssp             SCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cccCchheeecccCcceeccCCcceeccCCcc--cceeecccceeeehhhhccccCCCccccccccchh
Confidence            58999999999999999999999975433221  111112234589999877654  357999998863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2e-14  Score=73.15  Aligned_cols=67  Identities=12%  Similarity=0.081  Sum_probs=46.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCccee--cCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYD--LGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|+.|||++..+.......  ......++..|+|||.+....  ..++|+||+|+.
T Consensus       141 rDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvi  211 (318)
T d3blha1         141 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI  211 (318)
T ss_dssp             CCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCce
Confidence            5899999999999999999999997544222111  111122345689999987653  358899998864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.8e-14  Score=72.27  Aligned_cols=63  Identities=17%  Similarity=0.033  Sum_probs=45.0

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC--CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS--QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~--~~~~~w~~~i~   67 (69)
                      +|+||+||+++.+ +.+|++|||++........ ...   .++..|+|||++....+  ..+|+||+|+.
T Consensus       134 rDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~-~~~---~GT~~y~aPE~~~~~~~~~~~~DiwSlGvi  199 (273)
T d1xwsa_         134 RDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDF---DGTRVYSPPEWIRYHRYHGRSAAVWSLGIL  199 (273)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTTCEECCSSCB-CCC---CSCGGGSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred             ccCcccceEEecCCCeEEECccccceecccccc-ccc---ccCCCcCCHHHHcCCCCCCcccccccceee
Confidence            5899999999855 7999999999975433221 111   22345999999986653  35799998863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.30  E-value=1.9e-14  Score=72.73  Aligned_cols=67  Identities=15%  Similarity=0.154  Sum_probs=46.7

Q ss_pred             CCcccceeEEcC---CCeEEEcccCcccccccCcce-----ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA---GYSIKISNFGVVRNLYAADYY-----DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~---~~~~kl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||+||++..   +..++++|||+++.+......     .......++..|+|||.+.+.. ..++|+||+|+.
T Consensus       127 rDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~  202 (299)
T d1ckia_         127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV  202 (299)
T ss_dssp             SCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHH
T ss_pred             ccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHH
Confidence            589999999864   457999999999865432211     1111123456799999998765 458999999863

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.29  E-value=3e-14  Score=72.04  Aligned_cols=67  Identities=13%  Similarity=0.092  Sum_probs=46.0

Q ss_pred             CCcccceeEEcC-----CCeEEEcccCcccccccCcce-----ecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHA-----GYSIKISNFGVVRNLYAADYY-----DLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~-----~~~~kl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.     .+.++++|||+++.+......     .......++..|+|||.+.+.. ..++|+||+|+.
T Consensus       125 rDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~  202 (293)
T d1csna_         125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  202 (293)
T ss_dssp             CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHH
Confidence            589999999974     567999999999764322100     0111112345699999998765 447999998763

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=8.6e-15  Score=73.21  Aligned_cols=62  Identities=23%  Similarity=0.393  Sum_probs=42.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCCC-CCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVPS-QDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~-~~~~~w~~~i~   67 (69)
                      .|+++.||+++.++.+|+.+||+++.......     ....+..|+|||.+.+..+ .++|+||||+.
T Consensus       127 ~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~-----~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~i  189 (262)
T d1byga_         127 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGIL  189 (262)
T ss_dssp             SCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cccchHhheecCCCCEeecccccceecCCCCc-----cccccccCCChHHHhCCCCChHHHHHhHHHH
Confidence            48999999999999999999999976433211     1122345999999987664 48999999873

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.29  E-value=1.7e-14  Score=72.34  Aligned_cols=67  Identities=12%  Similarity=0.128  Sum_probs=43.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcc-eecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADY-YDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||+||+++.++..++.+|+.......... ........++..|+|||.+.+.. ..++|+||+|+.
T Consensus       135 rDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  203 (277)
T d1o6ya_         135 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV  203 (277)
T ss_dssp             CCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHH
Confidence            58999999999999999999998764432211 11111112234599999998765 458999998863

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=4.3e-14  Score=72.31  Aligned_cols=66  Identities=14%  Similarity=0.113  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC---CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP---SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~---~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.++++|||++..+......... .......|++||.+....   ..++|+||+|+.
T Consensus       153 rDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~-~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~i  221 (322)
T d1vzoa_         153 RDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL  221 (322)
T ss_dssp             CCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGC-GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred             ccCCccceeecCCCCEEEeeccchhhhccccccccc-ccccccccchhHHhhcCCcCCCchhhhHHHHHH
Confidence            589999999999999999999998754332211111 112234589999987543   346899998864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.2e-13  Score=70.93  Aligned_cols=62  Identities=19%  Similarity=0.097  Sum_probs=46.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.++.+|+.|||.+........     ....+..|+|||.+.+..  ..++|+|++|+.
T Consensus       145 rDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (346)
T d1cm8a_         145 RDLKPGNLAVNEDCELKILDFGLARQADSEMT-----GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  208 (346)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTTCEECCSSCC-----SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             cccCcchhhcccccccccccccceeccCCccc-----cccccccccCHHHHcCCCCCCccchhhcchHH
Confidence            58999999999999999999999976433211     111234599999987643  458999998863

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.25  E-value=4.5e-14  Score=71.02  Aligned_cols=65  Identities=15%  Similarity=0.104  Sum_probs=44.7

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+|++||+++.++.+|++|||.+............ . .....|++||.+....  ..++|+|++|+.
T Consensus       124 rDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~-~-~~~~~y~~pE~~~~~~~~~~~~DiwslGv~  190 (286)
T d1ob3a_         124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-E-IVTLWYRAPDVLMGSKKYSTTIDIWSVGCI  190 (286)
T ss_dssp             SCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHH
T ss_pred             cCCCCceeeEcCCCCEEecccccceecccCccccce-e-cccchhhhHHHHhCCCCCCcceeehhcCcH
Confidence            589999999999999999999998754332211111 1 1123489999987544  357899998864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2e-13  Score=70.34  Aligned_cols=64  Identities=16%  Similarity=0.064  Sum_probs=45.1

Q ss_pred             CCcccceeEEcCCC-eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGY-SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~-~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++ .+|++|||++............   .....|+|||.+....  ..++|+|++|+.
T Consensus       146 rDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~~DIwSlG~i  212 (350)
T d1q5ka_         146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVWSAGCV  212 (350)
T ss_dssp             CCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSC---CSCTTSCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             cCCCcceEEEecCCCceeEecccchhhccCCcccccc---cccccccChHHhhcccCCCcceeecccceE
Confidence            58999999999775 8999999998765433211111   1123489999887543  457999998863

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.16  E-value=4e-13  Score=68.55  Aligned_cols=63  Identities=10%  Similarity=0.109  Sum_probs=44.4

Q ss_pred             CCcccceeEEcCC-CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAG-YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~-~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i   66 (69)
                      +|+|++||+++.+ ..++++|||++...........   ...+..|+|||.+....  ..++|+|++|+
T Consensus       153 rDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  218 (328)
T d3bqca1         153 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGC  218 (328)
T ss_dssp             CCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCS---CCSCGGGCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred             ccccccceEEcCCCCeeeecccccceeccCCCcccc---cccCccccCcccccCCCCCCcccchhhhhh
Confidence            5899999999865 4689999999976543321111   12234589999987644  45789998875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=9.1e-13  Score=66.14  Aligned_cols=65  Identities=14%  Similarity=0.112  Sum_probs=46.3

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      .|+||+||+++.++.+|+.|||.+............  ...+..|.+||.+....  ..++|+||+|+.
T Consensus       125 rDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~i  191 (292)
T d1unla_         125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA--EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI  191 (292)
T ss_dssp             CCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCS--CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             ecccCcccccccCCceeeeecchhhcccCCCcccee--eccccchhhhhHhccCCCCCchhhccccchH
Confidence            589999999999999999999999765433211111  11233477999887654  357899998863

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.12  E-value=4.8e-13  Score=67.27  Aligned_cols=64  Identities=17%  Similarity=0.119  Sum_probs=45.4

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-------CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-------SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-------~~~~~~w~~~i~   67 (69)
                      .|+|++|++++.++.+|++|||++..+.........   ..+..|++||.+....       ..++|+|++|+.
T Consensus       134 rDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~---~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvi  204 (277)
T d1phka_         134 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV---CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI  204 (277)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCC---CSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHH
T ss_pred             cccccceEEEcCCCCeEEccchheeEccCCCceeee---eccCCCCCHHHhhccccccCCCCCchheEcccchh
Confidence            589999999999999999999999765433211111   1234589999987421       236899998863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.4e-12  Score=67.31  Aligned_cols=64  Identities=17%  Similarity=0.140  Sum_probs=41.8

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      .|+||.||+++.++..++.+|++++.........   ....+..|+|||++.+.. ..++|+|++|+.
T Consensus       143 rDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~  207 (355)
T d2b1pa1         143 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT---PYVVTRYYRAPEVILGMGYKENVDIWSVGCI  207 (355)
T ss_dssp             SCCCGGGEEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             ccCCccccccccccceeeechhhhhccccccccc---cccccccccChhhhcCCCCCCCcccccccch
Confidence            4899999999999999999999887543322111   111234589999998765 568999998763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=6.3e-13  Score=67.95  Aligned_cols=64  Identities=22%  Similarity=0.169  Sum_probs=45.2

Q ss_pred             CCcccceeEEcCC--CeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAG--YSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~--~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i~   67 (69)
                      +|+||.||+++.+  ..+++.|||++............   ..+..|++||.+.... ...+|+|++|+.
T Consensus       126 rDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~---~~t~~y~ape~~~~~~~~~~~DiWSlGvi  192 (321)
T d1tkia_         126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL---FTAPEYYAPEVHQHDVVSTATDMWSLGTL  192 (321)
T ss_dssp             CCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE---ESCGGGSCHHHHTTCEECHHHHHHHHHHH
T ss_pred             ccccccceeecCCCceEEEEcccchhhccccCCccccc---ccccccccchhccCCCCCchhhcccHHHH
Confidence            5899999999854  58899999999765433221111   1123489999988665 458999998863

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=6.6e-12  Score=64.37  Aligned_cols=62  Identities=18%  Similarity=0.071  Sum_probs=41.9

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccccCcceecCCCcccceeEEeccccccCC--CCCCCceEEEEe
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP--SQDGPSQSYRIF   67 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~--~~~~~~w~~~i~   67 (69)
                      +|+|+.||+++.++.+++.+||.+.......    . ...+...|+|||......  ..++|+|++|+.
T Consensus       145 rDiKp~NILi~~~~~~kl~dfg~a~~~~~~~----~-~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~  208 (348)
T d2gfsa1         145 RDLKPSNLAVNEDCELKILDFGLARHTDDEM----T-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  208 (348)
T ss_dssp             CCCCGGGEEECTTCCEEECCC----CCTGGG----S-SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHH
T ss_pred             cccCCccccccccccccccccchhcccCccc----c-cccccccccCchhhcCCccCCcccchhhhhHH
Confidence            5899999999999999999999986533221    1 112234589999877644  457899998863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=9.8e-12  Score=63.89  Aligned_cols=61  Identities=16%  Similarity=0.061  Sum_probs=43.3

Q ss_pred             CCcccceeEEcCCC------eEEEcccCcccccccCcceecCCCcccceeEEeccccccCC-CCCCCceEEEE
Q psy10556          1 MAESTKNCLVHAGY------SIKISNFGVVRNLYAADYYDLGGKSALPIRWMAWESIVKVP-SQDGPSQSYRI   66 (69)
Q Consensus         1 ~dl~~~nil~~~~~------~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~-~~~~~~w~~~i   66 (69)
                      +|+|+.||+++..+      .+++.|||.+........     ....+..|+|||.+.... ..++|+|++|+
T Consensus       150 rDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  217 (362)
T d1q8ya_         150 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-----NSIQTREYRSPEVLLGAPWGCGADIWSTAC  217 (362)
T ss_dssp             SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC-----SCCSCGGGCCHHHHHTCCCCTHHHHHHHHH
T ss_pred             ccCChhHeeeeccCcccccceeeEeecccccccccccc-----cccccccccChhhccccCCCccccccchHH
Confidence            58999999997654      479999999865432211     112234599999988765 45899998876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.53  E-value=4.9e-05  Score=35.72  Aligned_cols=27  Identities=26%  Similarity=0.108  Sum_probs=22.1

Q ss_pred             CCcccceeEEcCCCeEEEcccCcccccc
Q psy10556          1 MAESTKNCLVHAGYSIKISNFGVVRNLY   28 (69)
Q Consensus         1 ~dl~~~nil~~~~~~~kl~~~~~~~~~~   28 (69)
                      .|+||.||+++.. .++++|||.+....
T Consensus       127 rDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         127 GDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             SCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             ccCChhheeeeCC-CEEEEECCCcccCC
Confidence            4899999999864 57899999886544