Diaphorina citri psyllid: psy10562


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSAVKNTPRQRTRVLSRGSSFR
cccHHHHHHHHHHHHccccccccccCEECcccccEEEEEEEccccEEEEccEEEEEEEccccEEEEEEccEEEEEEECcccccEEEEEEEEcccHHHHHHHHHHHHHHccccccccccccccccccccccccccc
**SPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSAV************R*****
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GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSAVKNTPRQRTRVLSRGSSFR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
FERM, RhoGEF and pleckstrin domain-containing protein 2 Rho-guanine nucleotide exchange factor that activates RAC1. Plays a role in the response to class 3 semaphorins and remodeling of the actin cytoskeleton.confidentQ91VS8
FERM, RhoGEF and pleckstrin domain-containing protein 2 Rho-guanine nucleotide exchange factor that activates RAC1. Plays a role in the response to class 3 semaphorins and remodeling of the actin cytoskeleton.confidentO94887
FERM, RhoGEF and pleckstrin domain-containing protein 1 May function as Rho-guanine nucleotide exchange factor.confidentQ5RAB8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005488 [MF]bindingprobableGO:0003674
GO:0050789 [BP]regulation of biological processprobableGO:0008150, GO:0065007
GO:0044463 [CC]cell projection partprobableGO:0005575, GO:0042995, GO:0044464, GO:0005623
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0065009 [BP]regulation of molecular functionprobableGO:0008150, GO:0065007
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QIJ, chain A
Confidence level:very confident
Coverage over the Query: 1-113
View the alignment between query and template
View the model in PyMOL