Diaphorina citri psyllid: psy10593


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGEQQAKPYRDLTLHLLNKEEGNKVKAEIEQILDKKYISFLKQQNSWPFTEDSAEDKAKSNCEDSDDEMLNGNLNRRNNVMTEFSNRTKSGQFSTVIWYWYLRYIKHRCNKKFLELEIFYGHPKCEVEVITKSHQFITDDRTASTRVHGLFSLIRAEN
cccccccHHHHHHHHcccccccccccEEEEEEECccccEEEEECccccEEEEECccccccEEEEEcccEEEEECccccccEEEEEEEEEcHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHcHHHHHHHHHHHcccccccccccHccccccccccccHHHcccccccccccEEccccccccccEEEHHHHHHHHHHHHcccccEEEEEECccccCEEEEEEcccCEEEccccccCEEEcEEEEEEccc
*******************RVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENG***************PYRDLTLHLLNKEEGNKVKAEIEQILDKKYISFLKQQN**************************GNLNRRNNVMTEFSNRTKSGQFSTVIWYWYLRYIKHRCNKKFLELEIFYGHPKCEVEVITKSHQFITDDRTASTRVHGLFSLIRA**
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGEQQAKPYRDLTLHLLNKEEGNKVKAEIEQILDKKYISFLKQQNSWPFTEDSAEDKAKSNCEDSDDEMLNGNLNRRNNVMTEFSNRTKSGQFSTVIWYWYLRYIKHRCNKKFLELEIFYGHPKCEVEVITKSHQFITDDRTASTRVHGLFSLIRAEN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable RNA-binding protein EIF1AD Plays a role into cellular response to oxidative stress. Decreases cell proliferation.confidentQ8N9N8
Probable RNA-binding protein EIF1AD May play a role into cellular response to oxidative stress. May decrease cell proliferation.confidentQ0V9J5
Probable RNA-binding protein EIF1AD Plays a role into cellular response to oxidative stress. Decreases cell proliferation.confidentQ5RD29

Prediction of Gene Ontology Terms ?

No confident GO terms associated with the query are predicted

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DGY, chain A
Confidence level:very confident
Coverage over the Query: 13-114
View the alignment between query and template
View the model in PyMOL
Template: 2DGY, chain A
Confidence level:confident
Coverage over the Query: 126-172
View the alignment between query and template
View the model in PyMOL