Diaphorina citri psyllid: psy10663

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570--
CLTAKLLAQSGCSVLILEAGPDAPISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSKAFEDIGFKSPDTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNVTTVTKTTVEKTSVISED
ccccccccccccEEEEEcccccccccccccHHHHHHccccccccccccCCccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHccccccccccccHHHHHHcccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHccccccccccccccCECccccccccccccccccHHHHcccccccccEEEcccEEEEEEECccccEEEEEEEEEcccEEEEEEEccEEEEEccccHHHHHHHHcccccHHHHHHcccccCEcccccccccccccccccEEEECccccccHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccEEEccccccccccccccccccccHHHHHHHcccccccccEEEEEEccccccCEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccc
CLTAKLLAQSGCSVLILEAGPDAPISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSKAFEDIGFKSPDTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNVTTVTKTT**********
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CLTAKLLAQSGCSVLILEAGPDAPISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSKAFEDIGFKSPDTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNVTTVTKTTVEKTSVISED

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentQ5HL11
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentQ66D54
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentC3MIE4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042600 [CC]chorionprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FIM, chain B
Confidence level:very confident
Coverage over the Query: 1-360,376-552
View the alignment between query and template
View the model in PyMOL
Template: 2JBV, chain A
Confidence level:very confident
Coverage over the Query: 1-311,325-550
View the alignment between query and template
View the model in PyMOL
Template: 1CF3, chain A
Confidence level:probable
Coverage over the Query: 4-549
View the alignment between query and template
View the model in PyMOL